Ammonium and caesium carbonate peroxosolvates: supramolecular networks formed by hydrogen bonds

Diammonium carbonate hydrogen peroxide monosolvate, 2NH₄⁺·CO₃²⁻·H₂O₂, (I), and dicaesium carbonate hydrogen peroxide trisolvate, 2Cs⁺·CO₃²⁻·3H₂O₂, (II), were crystallized from 98% hydrogen peroxide. In (I), the carbonate anions and peroxide solvent molecules are arranged on twofold axes. The peroxide molecules act as donors in only two hydrogen bonds with carbonate groups, forming chains along the a and c axes. In the structure of (II), there are three independent Cs⁺ ions, two of them residing on twofold axes, as are two of the four peroxide molecules, one of which is disordered. Both structures comprise complicated three‐dimensional hydrogen‐bonded networks.     

5,7,7,12,14,14‐Hexamethyl‐4,11‐diaza‐1,8‐diazonia­cyclo­tetra­decane penta­cyano­nitroso­ferrate(II) dihydrate: a supramolecular compound constructed by hydrogen bonds

The title compound, (C₁₆H₃₈N₄)[Fe(CN)₅(NO)]·2H₂O, contains one [Fe(CN)₅(NO)]²⁻ dianion, two half [H₂teta]²⁺ dications (teta is 5,7,7,12,14,14‐hexa­methyl‐1,4,8,11‐tetra­aza­cyclo­tetra­decane), each lying about an independent inversion centre, and two solvent water mol­ecules, all of which are held together by hydrogen bonds to form a three‐dimensional supramolecular framework.     

Supramolecular architectures in CoII and CuII complexes with thiophene‐2‐carboxylate and 2‐amino‐4,6‐dimethoxypyrimidine ligands

The coordination chemistry of mixed‐ligand complexes continues to be an active area of research since these compounds have a wide range of applications. Many coordination polymers and metal–organic framworks are emerging as novel functional materials. Aminopyrimidine and its derivatives are flexible ligands with versatile binding and coordination modes which have been proven to be useful in the construction of organic–inorganic hybrid materials and coordination polymers. Thiophenecarboxylic acid, its derivatives and their complexes exhibit pharmacological properties. Cobalt(II) and copper(II) complexes of thiophenecarboxylate have many biological applications, for example, as antifungal and antitumor agents. Two new cobalt(II) and copper(II) complexes incorporating thiophene‐2‐carboxylate (2‐TPC) and 2‐amino‐4,6‐dimethoxypyrimidine (OMP) ligands have been synthesized and characterized by X‐ray diffraction studies, namely (2‐amino‐4,6‐dimethoxypyrimidine‐κN)aquachlorido(thiophene‐2‐carboxylato‐κO)cobalt(II) monohydrate, [Co(C₅H₃O₂S)Cl(C₆H₉N₃O₂)(H₂O)]·H₂O, (I), and catena‐poly[copper(II)‐tetrakis(μ‐thiophene‐2‐carboxylato‐κ²O:O′)‐copper(II)‐(μ‐2‐amino‐4,6‐dimethoxypyrimidine‐κ²N¹:N³)], [Cu₂(C₅H₃O₂S)₄(C₆H₉N₃O₂)]_n, (II). In (I), the Co^II ion has a distorted tetrahedral coordination environment involving one O atom from a monodentate 2‐TPC ligand, one N atom from an OMP ligand, one chloride ligand and one O atom of a water molecule. An additional water molecule is present in the asymmetric unit. The amino group of the coordinated OMP molecule and the coordinated carboxylate O atom of the 2‐TPC ligand form an interligand N—H…O hydrogen bond, generating an S(6) ring motif. The pyrimidine molecules also form a base pair [R₂²(8) motif] via a pair of N—H…N hydrogen bonds. These interactions, together with O—H…O and O—H…Cl hydrogen bonds and π–π stacking interactions, generate a three‐dimensional supramolecular architecture. The one‐dimensional coordination polymer (II) contains the classical paddle‐wheel [Cu₂(CH₃COO)₄(H₂O)₂] unit, where each carboxylate group of four 2‐TPC ligands bridges two square‐pyramidally coordinated Cu^II ions and the apically coordinated OMP ligands bridge the dinuclear copper units. Each dinuclear copper unit has a crystallographic inversion centre, whereas the bridging OMP ligand has crystallographic twofold symmetry. The one‐dimensional polymeric chains self‐assemble via N—H…O, π–π and C—H…π interactions, generating a three‐dimensional supramolecular architecture.     

2‐Methylphenyl 2‐methoxyacridine‐9‐carboxylate

The title compound, C₂₂H₁₇NO₃, crystallizes in the monoclinic space group P2₁/c with four molecules per unit cell. The mol­ecules are arranged in centrosymmetric pairs, joined via the C and attached H atoms in the meta position relative to the methoxy group. These pairs are bonded in the crystalline phase as a result of non‐specific dispersive interactions, and through a network of C—H?O interactions involving the non‐bonded O atom of the carboxy group and, to some extent, the O atom of the methoxy group. The methoxy substituent lies in the plane of the almost planar acridine moiety and is directed towards the phenyl ester group. The phenyl ester group itself is twisted by 35.9 (5)° relative to the mean plane of the acridine moiety.     

A two‐dimensional ZnII coordination polymer constructed by benzotriazole‐5‐carboxylate and 1,4,8,9‐tetraazatriphenylene

Poly[[(μ₃‐benzotriazole‐5‐carboxylato‐κ⁴N¹:N³:O,O′)(1,4,8,9‐tetraazatriphenylene‐κ²N⁸,N⁹)zinc(II)] 0.25‐hydrate], {[Zn(C₇H₃N₃O₂)(C₁₄H₈N₄)]·0.25H₂O}_n, exhibits a two‐dimensional layer structure in which the asymmetric unit contains one Zn^II centre, one 1,4,8,9‐tetraazatriphenylene (TATP) ligand, one benzotriazole‐5‐carboxylate (btca) ligand and 0.25 solvent water molecules. Each Zn^II ion is six‐coordinated and surrounded by four N atoms from two different btca ligands and one chelating TATP ligand, and by two O atoms from a third btca ligand, to furnish a distorted octahedral geometry. The infinite connection of the metal ions and ligands forms a two‐dimensional wave‐like (6,3) layer structure. Adjacent layers are connected by C—H...N hydrogen bonds. The solvent water molecules are located in partially occupied sites between parallel pairs of inversion‐related TATP ligands that belong to two separate layers.     

Two 3D supramolecules with helices constructed by hydrogen bonds based on p-thioacetatebenzoic acid ligand

Abstract  

p-Thioacetatebenzoic acid (H₂L) and a combination of N-donor ligands such as 4,4′-bipyridine (4,4′-bipy) and 1,3-bi(4-pyridyl)propane (bpp) with metal ions Mn(II) and Ni(II) give rise to two coordination polymers, namely, [Mn(HL)₂(bpp)₂(H₂O)₂] _n (1), [NiL (4,4′-bipy)(H₂O)₃] _n ·nH₂O (2). 1 features an unusual “8” shaped double layer by hydrogen bonds and two different types of helical chains are arrayed alternatively in the 2D double layer framework, which further extends into a 3D supramolecular structure through C–H···O hydrogen bonds. 2 consists of 1D chains which further connect with each other via hydrogen bonds to form the final 3D framework including two different types of helical structure. Photoluminescence study reveals that 1 displays intense structure-related fluorescent emission bands (λ _ex = 369 nm) at 414 nm in the solid state at room temperature. Electrochemical property of 2 reveals that the process of the redox is irreversible.     

Supramolecular complexes constructed with carboxylate Cu(II) and 2-(2-pyridyl)-benzimidazole via hydrogen bonding

Four copper(II) supramolecular complexes, {[Cu(Hpb)(mal)]·H₂O} _n (1), (Hpb?=?2-(2-pyridyl)-benzimidazole, mal?=?maleate), [Cu₄(pb)₄(cro)₄(MeOH)₂]·2MeOH (2) (cro?=?crotonate), [Cu₂(pb)(Hpb)(mac)₃(MeOH)] (3) (mac?=?α-methacrylate) and [Cu(Hpb)(acr)₂(H₂O)] (4) (acr?=?acrylate), based on carboxylate copper(II)-aromatic ligand systems which are assembled by combination of metal coordination, hydrogen-bond and π–π interactions, have been rationally designed and synthesized. Complex 1 forms a 3D supramolecular network with open channels by extending 2D undulating sheets constructed from 1D helical chains. Complex 2 generates a 2D grid-like sheet via unusual finite-chain tetranuclear molecules, with four copper atoms arranged in a line; the unit does not extend further due to the capping effect of the terminal methanol. Complexes 3 and 4 present a 1D sinusoidal structure and a 3D columnar network with 1D ladder-shaped double chains, respectively. Interestingly, coligand Hpb, deprotonated or/and neutral in different supramolecular complexes, provides hydrogen bonding and π–π stacking interactions. In complexes 2, 3 and 4, carboxylate anions show various bridging modes, which are reflected in their magnetic properties. Weak ferromagnetic coupling (syn-anti µ-OCO) exists in 1, antiferromagnetic (syn-syn µ-OCO) and weak ferromagnetic coupling (µ-O of the??COO group) in 2 and antiferromagnetic coupling (syn-syn µ-OCO) in 3.     

Octyl 1‐(5‐tert‐butyl‐1H‐pyrazol‐3‐yl)‐2‐(4‐chlorophenyl)‐1H‐benzimidazole‐5‐carboxylate: complex sheets built from N—H...N,C—H...N and C—H...O hydrogen bonds

In the title compound, C₂₉H₃₅ClN₄O₂, the bond lengths provide evidence for aromatic delocalization in the pyrazole ring but bond fixation in the fused imidazole ring, and the octyl chain is folded, rather than adopting an all‐trans chain‐extended conformation. A combination of N—H...N, C—H...N and C—H...O hydrogen bonds links the molecules into sheets, in which the hydrogen bonds occupy the central layer with the tert‐butyl and octyl groups arranged on either side, such that the closest contacts between adjacent sheets involve only the octyl groups. Comparisons are made with the supramolecular assembly in some simpler analogues.     

A three‐dimensional supramolecular framework of silver(I), 2‐phenylquinoline‐4‐carboxylate and 4,4′‐bipyridine

A novel supramolecular framework, catena‐poly[[[aqua(2‐phenylquinoline‐4‐carboxylato‐κO)silver(I)]‐μ‐4,4′‐bipyridine‐κ²N:N′] dihydrate], {[Ag(C₁₆H₁₀NO₂)(C₁₀H₈N₂)(H₂O)]·2H₂O}_n, has been synthesized and structurally characterized. The Ag^I centres are four‐coordinated and bridged by 4,4′‐bipyridine (4,4′‐bipy) ligands to form a one‐dimensional Ag–bipy chain. The Ag–bipy chains are further linked together by intermolecular O—H...O and O—H...N hydrogen‐bonding interactions between adjacent chains, resulting in a three‐dimensional framework.     

Pillared-layer microporous metal-organic frameworks constructed by robust hydrogen bonds. Synthesis, characterization, and magnetic and adsorption properties of 2,2'-biimidazole and carboxylate complexes

Two new isostructural complexes [M(H2biim)3][M(btc)(Hbiim)].2H2O (M = Co, (1); M = Ni, (2)) (btc = 1,3,5-benzenetricarboxylate; H2biim = 2,2'-biimidazole) have been synthesized and characterized by single-crystal X-ray diffraction. They present a unique structure consisting of two distinct units: the monomeric cations [M(H2biim)3]2+ and the two-dimensional (2D) anionic polymer [M(Hbiim)(btc)]2-. In the anionic moiety, the Hbiim- monoanion is simultaneously coordinated to one metal atom in a bidentate mode and further to another metal atom in a monodentate mode. The imidazolate groups bridge the two adjacent metal ions into a helical chain which is further arranged in left- and right-handed manners. These chains are bridged by btc ligands into a 2D brick wall structure. The most interesting aspect is that the [M(H2biim)3]2+ cations act as pillars and link the anionic layers via robust heteromeric hydrogen-bonded synthons (9) and (7) formed by the uncoordinated oxygen atoms of carboxylate groups and the H2biim ligands, resulting in a microporous metal-organic framework with one-dimensional (1D) channels (ca. 11.85 angstroms x 11.85 angstroms for 1 and 11.43 angstroms x 11.43 angstroms for 2). Magnetic properties of these two complexes have also been studied in the temperature range of 2-300 K, and their magnetic susceptibilities obey the Curie-Weiss law in the temperature range of 20-300 K (for 1) and 2-300 K (for 2), respectively, showing anti-ferromagnetic coupling through imidazolate bridging. Taking into consideration the Heisenberg infinite chain model as well as the possibility of chain-to-chain and chain-to-cation interactions, the anti-ferromagnetic exchange of 2 is analyzed via a correction for the molecular field, giving the values of g(cat) = 2.296, g(Ni) = 2.564, J = -13.30 cm(-1), and zJ' = -0.017 cm(-1). The microporous frameworks are stable at ca. 350 degrees C. They do not collapse after removal of the guest water molecules in the channels, and they adsorb methanol molecules selectively.     

Synthesis of six new 2‐Aryl‐N‐biphenyl benzimidazoles and crystal structure of methyl 4′ [(2‐p‐Chlorophenyl‐1H‐benzimidazole‐1‐yl)‐methyl]biphenyl‐2‐carboxylate

Six new 2‐aryl‐N‐biphenyl benzimidazoles were designed and synthesized, starting with O‐phenylenediamine and carboxylic acids via cyclization, followed by N‐alkylation. All new compounds were identified by H NMR, IR, MS spectra and elemental analysis. The crystal structure of methyl 4′‐[(2‐p‐chlorophenyl‐1H benzimidazole‐1‐yl)methyl]biphenyl‐2‐carboxylate ( 4f ) was determined by single crystal X‐raydiffraction.     

Charge‐assisted hydrogen‐bonded supramolecular networks in acetoguanaminium hydrogen phthalate,acetoguanaminium hydrogen maleate and acetoguanaminium 3‐hydroxypicolinate monohydrate

In 2,4‐diamino‐6‐methyl‐1,3,5‐triazin‐1‐ium (acetoguanaminium) hydrogen phthalate, C₄H₈N₅⁺·C₈H₅O₄⁻, (I), acetoguanaminium hydrogen maleate, C₄H₈N₅⁺·C₄H₃O₄⁻, (II), and acetoguanaminium 3‐hydroxypicolinate monohydrate, C₄H₈N₅⁺·C₆H₄NO₃⁻·H₂O, (III), the acetoguanaminium cations interact with the carboxylate groups of the corresponding anions via a pair of nearly parallel N—H...O hydrogen bonds, forming R₂²(8) ring motifs. In (II) and (III), N—H...N base‐pairing is observed, while there is none in (I). In (II), a series of fused R₃²(8), R₂²(8) and R₃²(8) hydrogen‐bonded rings plus fused R₂²(8), R₆²(12) and R₂²(8) ring motifs occur alternately, aggregating into a supramolecular ladder‐like arrangement. In (III), R₂²(8) motifs occur on either side of a further ring formed by pairs of N—H...O hydrogen bonds, forming an array of three fused hydrogen‐bonded rings. In (I) and (II), the anions form a typical intramolecular O—H...O hydrogen bond with graph set S(7), whereas in (III) an intramolecular hydrogen bond with graph set S(6) is formed.     

Bis{2‐[(phenylimino)ethyl]‐1H‐pyrrol‐1‐ido‐κ2N,N′}nickel(II): a supramolecular structure formed by C—H...π hydrogen bonds

In the title compound, [Ni(C₁₂H₁₁N₂)₂], the Ni^II cation lies on an inversion centre and has a square‐planar coordination geometry. This transition metal complex is composed of two deprotonated N,N′‐bidentate 2‐[(phenylimino)ethyl]‐1H‐pyrrol‐1‐ide ligands around a central Ni^II cation, with the pyrrolide rings and imine groups lying trans to each other. The Ni—N bond lengths range from 1.894 (3) to 1.939 (2) Å and the bite angle is 83.13 (11)°. The Ni—N(pyrrolide) bond is substantially shorter than the Ni—N(imino) bond. The planes of the phenyl rings make a dihedral angle of 78.79 (9)° with respect to the central NiN₄ plane. The molecules are linked into simple chains by an intermolecular C—H...π interaction involving a phenyl β‐C atom as donor. Intramolecular C—H...π interactions are also present.     

Two different one‐dimensional CdII halide coordination polymers constructed through bridging carboxylate ligands

Two cadmium halide complexes, catena‐poly[[chloridocadmium(II)]‐di‐μ‐chlorido‐[chloridocadmium(II)]‐bis[μ₂‐4‐(dimethylamino)pyridin‐1‐ium‐1‐acetate]‐κ³O:O,O′;κ³O,O′:O], [CdCl₂(C₉H₁₂N₂O₂)]_n, (I), and catena‐poly[1‐cyanomethyl‐1,4‐diazoniabicyclo[2.2.2]octane [[dichloridocadmium(II)]‐μ‐oxalato‐κ⁴O¹,O²:O^1′,O^2′] monohydrate], {(C₈H₁₅N₃)[CdCl₂(C₂O₄)]·H₂O}_n, (II), were synthesized in aqueous solution. In (I), the Cd^II cation is octahedrally coordinated by three O atoms from two carboxylate groups and by one terminal and two bridging chloride ligands. Neighbouring Cd^II cations are linked together by chloride anions and bridging O atoms to form a one‐dimensional zigzag chain. Hydrogen‐bond interactions are involved in the formation of the two‐dimensional network. In (II), each Cd^II cation is octahedrally coordinated by four O atoms from two oxalic acid ligands and two terminal Cl⁻ ligands. Neighbouring Cd^II cations are linked together by oxalate groups to form a one‐dimensional anionic chain, and the water molecules and organic cations are connected to this one‐dimensional zigzag chain through hydrogen‐bond interactions.     

Hydrogen‐bonded sheet structures in methyl 4‐(4‐chloroanilino)‐3‐nitrobenzoate and methyl 1‐benzyl‐2‐(4‐chlorophenyl)‐1H‐benzimidazole‐5‐carboxylate

In methyl 4‐(4‐chloroanilino)‐3‐nitrobenzoate, C₁₄H₁₁ClN₂O₄, (I), there is an intramolecular N—H...O hydrogen bond and the intramolecular distances provide evidence for electronic polarization of the o‐quinonoid type. The molecules are linked into sheets built from N—H...O, C—H...O and C—H...π(arene) hydrogen bonds, together with an aromatic π–π stacking interaction. The molecules of methyl 1‐benzyl‐2‐(4‐chlorophenyl)‐1H‐benzimidazole‐5‐carboxylate, C₂₂H₁₇ClN₂O₂, (II), are also linked into sheets, this time by a combination of C—H...π(arene) hydrogen bonds and aromatic π–π stacking interactions.     

Two (E)‐2‐arylidene‐1,4‐di‐p‐tosyl‐1,2,3,4‐tetrahydroquinoxaline compounds: supramolecular frameworks built with C—H...O and C—H...π(arene) hydrogen bonds and π–π stacking interactions

The pyrazine ring in two N‐substituted quinoxaline derivatives, namely (E)‐2‐(2‐methoxybenzylidene)‐1,4‐di‐p‐tosyl‐1,2,3,4‐tetrahydroquinoxaline, C₃₀H₂₈N₂S₂O₅, (II), and (E)‐methyl 2‐[(1,4‐di‐p‐tosyl‐1,2,3,4‐tetrahydroquinoxalin‐2‐ylidene)methyl]benzoate, C₃₁H₂₈N₂S₂O₆, (III), assumes a half‐chair conformation and is shielded by the terminal tosyl groups. In the molecular packing of the compounds, intermolecular C—H...O hydrogen bonds between centrosymmetrically related molecules generate dimeric rings, viz. R₂²(22) in (II) and R₂²(26) in (III), which are further connected through C—H...π(arene) hydrogen bonds and π–π stacking interactions into novel supramolecular frameworks.     

catena‐Poly[bis[silver(I)‐μ2‐4,4′‐bipyridine‐κ2N:N′] naphthalene‐2,6‐dicarboxylate tetrahydrate]: self‐assembly of a supramolecular framework via coordination bonds and supramolecular interactions

The ultrasonic reaction of AgNO₃, 4,4′‐bipyridine (bipy) and naphthalene‐2,6‐dicarboxylic acid (H₂NDC) gives rise to the title compound, {[Ag₂(C₁₀H₈N₂)₂](C₁₂H₆O₄)·4H₂O}_n. The NDC dianion is located on an inversion centre. The Ag^I centre is coordinated in a linear manner by two N atoms from two bipy ligands. The crystal structure consists of one‐dimensional Ag^I–bipy cationic chains and two‐dimensional NDC–H₂O anionic sheets, constructed by coordination bonds and supramolecular interactions, respectively.     

Two novel d10 transition metal complexes based on 1H‐benzimidazole‐5,6‐dicarboxylic acid: Synthesis,structure and multifunctional luminescence detection

Two new coordination complexes based on benzimidazole dicarboxylic acid, Zn(Hbidc)?H₂O ( 1 ) and Cd(Hbidc)(H₂O) ( 2 ), have been synthesized under hydrothermal conditions. The complexes were characterized using elemental analysis, infrared and UV–visible spectroscopies, powder X‐ray diffraction, thermogravimetry and single‐crystal X‐ray diffraction. Structural analyses showed that the crystal structures of 1 and 2 are different, due to the various modes of linking of the benzimidazole dicarboxylic acid. Complex 1 has a two‐dimensional network structure and 2 has a three‐dimensional network structure. In addition, we studied the performance of the fluorescence response of two complexes. Results showed that the complexes can be used as chemical sensors for multifunctional testing, such as for UO₂²⁺, xanthine and Fe³⁺ ions. Even if the concentration is very low, they could also be detected, showing that coordination complexes 1 and 2 have very high fluorescence sensitivity. The detection limit for UO₂²⁺ is 5.42 nM ( 1 ) and 0.02 nM ( 2 ), that for xanthine is 1.37 nM ( 1 ) and 0.28 nM ( 2 ), and that for Fe³⁺ ions is 0.76 nM ( 1 ) and 0.62 nM ( 2 ).     

Three‐dimensional supramolecular architecture in imidazolium hydrogen 2,3,5,6‐tetrafluoroterephthalate

The asymmetric unit of the title salt formed between 2,3,5,6‐tetrafluoroterephthalic acid (H₂tfbdc) and imidazolium (ImH), C₃H₅N₂⁺·C₈HF₄O₄⁻, contains one Htfbdc⁻ anion and one ImH₂⁺ cation, joined by a classical N—H...O hydrogen bond. The acid and base subunits are further linked by N—H...O and O—H...O hydrogen bonds into infinite two‐dimensional layers with R⁵₆(32) hydrogen‐bond motifs. The resulting (4,4) network layers interpenetrate to produce an interlocked three‐dimensional structure. The final three‐dimensional supramolecular architecture is further stabilized by the linkages of two C—H...O interactions.     

Five pseudopolymorphs of 6‐amino‐2‐thiouracil: absence of N—H...S hydrogen bonds

In order to study the preferred hydrogen‐bonding pattern of 6‐amino‐2‐thiouracil, C₄H₅N₃OS, (I), crystallization experiments yielded five different pseudopolymorphs of (I), namely the dimethylformamide disolvate, C₄H₅N₃OS·2C₃H₇NO, (Ia), the dimethylacetamide monosolvate, C₄H₅N₃OS·C₄H₉NO, (Ib), the dimethylacetamide sesquisolvate, C₄H₅N₃OS·1.5C₄H₉NO, (Ic), and two different 1‐methylpyrrolidin‐2‐one sesquisolvates, C₄H₅N₃OS·1.5C₅H₉NO, (Id) and (Ie). All structures contain R₂¹(6) N—H...O hydrogen‐bond motifs. In the latter four structures, additional R₂²(8) N—H...O hydrogen‐bond motifs are present stabilizing homodimers of (I). No type of hydrogen bond other than N—H...O is observed. According to a search of the Cambridge Structural Database, most 2‐thiouracil derivatives form homodimers stabilized by an R₂²(8) hydrogen‐bonding pattern, with (i) only N—H...O, (ii) only N—H...S or (iii) alternating pairs of N—H...O and N—H...S hydrogen bonds.