The OH radical-H2O molecular interaction potential

The OH radical is one of the most important oxidants in the atmosphere due to its high reactivity. The study of hydrogen-bonded complexes of OH with the water molecules is a topic of significant current interest. In this work, we present the development of a new analytical functional form for the interaction potential between the rigid OH radical and H(2)O molecules. To do this we fit a selected functional form to a set of high level ab initio data. Since there is a low-lying excited state for the H(2)O.OH complex, the impact of the excited state on the chemical behavior of the OH radical can be very important. We perform a potential energy surface scan using the CCSD(T)/aug-cc-pVTZ level of electronic structure theory for both excited and ground states. To model the physics of the unpaired electron in the OH radical, we develop a tensor polarizability generalization of the Thole-type all-atom polarizable rigid potential for the OH radical, which effectively describes the interaction of OH with H(2)O for both ground and excited states. The stationary points of (H(2)O)(n)OH clusters were identified as a benchmark of the potential.     

Investigations of the structure of H2O clusters adsorbed on TiO2 surfaces by near-infrared absorption spectroscopy

The overtone and combination bands of the fundamental vibration modes (nu(1), symmetric stretching; nu(2), bending; and nu(3), asymmetric stretching) attributed to the H(2)O molecules adsorbed on a TiO(2) surface could be observed in the near-infrared (NIR) region. Especially, two absorption bands attributed to the combination (nu(2) + nu(3)) and (nu(1) + nu(3)) modes of the H(2)O molecules adsorbed on the TiO(2) surface were observed at around 1940 and 1450 nm, respectively. From detailed investigations on the (nu(2) + nu(3)) combination band, it was found that H(2)O molecules absorbed on a TiO(2) surface aggregate to form clusters due to the high surface tension of H(2)O arising from the intermolecular hydrogen bonds, and the hydrogen-bonded H(2)O in the bulk part of the cluster and the hydrogen-bond-free H(2)O in the outside spherical part of the cluster could be easily distinguished. Furthermore, it was quantitatively confirmed that the relaxation of the surface energy accompanying the adsorption of H(2)O on the TiO(2) surface stabilized the adsorption states of the hydrogen-bonded H(2)O molecules, while on the other hand, the hydrogen-bond-free H(2)O molecules became unstable as compared to the liquid-phase H(2)O molecules.     

An interaction model for OH + H2O-mixed and pure H2O overlayers adsorbed on Pt(111)

A model potential for the adsorbate-adsorbate interaction among OH and H2O molecules adsorbed on a Pt(111) surface has been developed solely based on first-principle calculations. By combining this directional-dependent model potential for the lateral interaction with a lattice model of Ising type, large length scale structure calculations can be made. The strength of different hydrogen bonds can be analyzed in detail from this model potential. It is found that the hydrogen bond between OH and H2O molecules is stronger than that between two H2O molecules (0.4 eV per pair as compared to 0.2 eV per pair, respectively). Via the computed chemical potential for water in mixed OH + H2O overlayers the water uptake as a function of oxygen precoverage on Pt(111) has been determined. The results compare very well with recent experiments.     

Existence of hydration forces in the interaction between apoferritin molecules adsorbed on silica surfaces

The atomic force microscope, together with the colloid probe technique, has become a very useful instrument to measure interaction forces between two surfaces. Its potential has been exploited in this work to study the interaction between protein (apoferritin) layers adsorbed on silica surfaces and to analyze the effect of the medium conditions (pH, salt concentration, salt type) on such interactions. It has been observed that the interaction at low salt concentrations is dominated by electrical double layer (at large distances) and steric forces (at short distances), the latter being due to compression of the protein layers. The DLVO theory fits these experimental data quite well. However, a non-DLVO repulsive interaction, prior to contact of the protein layers, is observed at high salt concentration above the isoelectric point of the protein. This behavior could be explained if the presence of hydration forces in the system is assumed. The inclusion of a hydration term in the DLVO theory (extended DLVO theory) gives rise to a better agreement between the theoretical fits and the experimental results. These results seem to suggest that the hydration forces play a very important role in the stability of the proteins in the physiological media.     

The interaction of H(2)O(2) with ice surfaces between 203 and 233 K

The interaction of H(2)O(2) with ice surfaces at temperatures between 203 and 233 K was investigated using a low pressure, coated-wall flow tube equipped with a chemical ionisation/electron impact mass spectrometer. Equilibrium surface coverages of H(2)O(2) on ice were measured at various concentrations and temperatures to derive Langmuir-type adsorption isotherms. H(2)O(2) was found to be strongly partitioned to the ice surface at low temperatures, with a partition coefficient, K(linC), equal to 2.1 × 10(-5) exp(3800/T) cm. At 228 K, this expression results in values of K(linC) which are orders of magnitude larger than the single previous determination and suggests that H(2)O(2) may be significantly partitioned to the ice phase in cirrus clouds. The partition coefficient for H(2)O(2) was compared to several other trace gases which hydrogen-bond to ice surfaces and a good correlation with the free energy of condensation found. For this class of trace gas a simple parameterisation for calculating K(linC)(T) from thermodynamic properties was established.     

Theoretical investigation on RuO2 nanoclusters adsorbed on TiO2 rutile (110) and anatase (101) surfaces

Minimizing the energy of an $N$ -electron system as a functional of a two-electron reduced density matrix (2-RDM), constrained by necessary $N$ -representability conditions (conditions for the 2-RDM to represent an ensemble $N$ -electron quantum system), yields a rigorous lower bound to the ground-state energy in contrast to variational wave function methods. We characterize the performance of two sets of approximate constraints, (2,2)-positivity (DQG) and approximate (2,3)-positivity (DQGT) conditions, at capturing correlation in one-dimensional and quasi-one-dimensional (ladder) Hubbard models. We find that, while both the DQG and DQGT conditions capture both the weak and strong correlation limits, the more stringent DQGT conditions improve the ground-state energies, the natural occupation numbers, the pair correlation function, the effective hopping, and the connected (cumulant) part of the 2-RDM. We observe that the DQGT conditions are effective at capturing strong electron correlation effects in both one- and quasi-one-dimensional lattices for both half filling and less-than-half filling.     

The hydrophobic interaction between macroscopic surfaces

The aim of this paper is to review our current level of knowledge of the interaction between hydrophobic surfaces immersed in water. The strong attractive forces observed between such surfaces have generally been referred to as “the hydrophobic interaction”. Although the precise origin of this force has not yet been determined, we will examine recent experimental studies and relate them to other phenomena like cavity formation and repulsive hydration forces.     

Studies on the interaction of interface between morin and TiO2

For the first time, the interaction between morin and TiO(2) nanoparticles was investigated by UV-vis absorption, UV-vis diffuse reflectance spectrum, FT-IR, fluorescence, and three-dimensional fluorescence spectra techniques. The results showed that chemical bonds had formed between the surface atoms of TiO(2) nanoparticles and morin molecules. The fluorescence intensity of TiO(2)-morin nanocomposites was much higher than that of morin particles. In addition, the effect of TiO(2) concentrations on the fluorescence intensity of morin was also investigated.     

Surfactant adsorption on solid surfaces: recognition between heterogeneous surfaces and adsorbed surfactant aggregates

We study the possibility of the recognition of surface heterogeneities with surfactant adsorption by performing Monte Carlo simulations. It is found that when each patch size of a heterogeneous surface is capable of being commensurate with the size of aggregates adsorbed on the constituent homogeneous surfaces, the adsorption isotherm of the system will display both adsorption characteristics for each homogeneous surface. Otherwise, one or more adsorption characteristics will be spoiled or destroyed. Therefore, the adsorption isotherm of surfactants on a heterogeneous surface provides a signal of recognition.     

Photoinduced interaction between riboflavin and TiO(2) colloid

The adsorption of riboflavin on the surface of TiO(2) colloidal particles and the electron transfer process from its singlet excited state to the conduction band of TiO(2) were examined by absorption and fluorescence quenching measurements. The apparent association constants (K(app)) were determined. The quenching mechanism is discussed involving electron transfer from riboflavin to TiO(2).     

Mechanism of lateral interactions between molecules adsorbed on oxide surfaces

Comparison of the observed and calculated values for static and dynamic frequency shifts due to lateral interactions between CO molecules adsorbed on oxides indicates that these interactions are indirect and performed through a solid. Mechanism of static interaction includes relaxation, i.e. the displacement of surface atoms due to their adsorption.

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Peptide/TiO2 surface interaction: a theoretical and experimental study on the structure of adsorbed ALA-GLU and ALA-LYS

The adsorption on the TiO(2) surface of two dipeptides AE (L-alanine-L-glutamic acid) and AK (L-alanine-L-lysine), that are "building blocks" of the more complex oligopeptide EAK16, has been investigated both theoretically and experimentally. Classical molecular dynamics simulations have been used to study the adsorption of H-Ala-Glu-NH(2) and H-Ala-Lys-NH(2) dipeptides onto a rutile TiO(2) (110) surface in water solution. Several peptide conformers have been considered simultaneously upon the surface. The most probable contact points between the molecules and the surface have been identified. Carbonyl oxygens as well as nitrogen atoms are possible Ti coordination points. Local effects are responsible for adsorption and desorption events. Self-interaction effects can induce molecular reorientations giving less strongly adsorbed species. The chemical structure and composition of thin films of the two dipeptides AE and AK on TiO(2) were investigated by XPS (X-ray photoelectron spectroscopy) measurements at both O and N K-edges. Theoretical ab initio calculations (DeltaSCF) were also performed to simulate the spectra, allowing for a direct comparison between experiment and theory.     

Cooperativity between OH...O and CH...O hydrogen bonds involving dimethyl sulfoxide-H2O-H2O complex

The cooperativity between the O-H...O and C-H...O hydrogen bonds has been studied by quantum chemical calculations at the MP2/6-311++G(d,p) level in gaseous phase and at the B3LYP/6-311++G(d,p) level in solution. The interaction energies of the O-H...O and C-H...O H-bonds are increased by 53 and 58%, respectively, demonstrating that there is a large cooperativity. Analysis of hydrogen-bonding lengths, OH bond lengths, and OH stretching frequencies also supports such a conclusion. By NBO analysis, it is found that orbital interaction plays a great role in enhancing their cooperativity. The strength increase of the C-H...O H-bond is larger than that of the O-H...O H-bond due to the cooperativity. The solvent has a weakening effect on the cooperativity.     

Adsorption of organic molecules on rutile TiO2 and anatase TiO2 single crystal surfaces

The interaction of organic molecules with titanium dioxide surfaces has been the subject of many studies over the last few decades. Numerous surface science techniques have been utilised to understand the often complex nature of these systems. The reasons for studying these systems are hugely diverse given that titanium dioxide has many technological and medical applications. Although surface science experiments investigating the adsorption of organic molecules on titanium dioxide surfaces is not a new area of research, the field continues to change and evolve as new potential applications are discovered and new techniques to study the systems are developed. This tutorial review aims to update previous reviews on the subject. It describes experimental and theoretical work on the adsorption of carboxylic acids, dye molecules, amino acids, alcohols, catechols and nitrogen containing compounds on single crystal TiO(2) surfaces.     

Dynamics of fibronectin adsorption on TiO2 surfaces

In the present work we analyze the dynamics of fibronectin (FN) adsorption on two different stable titanium oxides, with varied surface roughness, and chemically similar to those used in clinical practice. The two types of titanium oxide surfaces used were TiO2 sputtered on Si (TiO2 sp) and TiO2 formed on commercially pure titanium after immersion in H2O2 (TiO2 cp). Surface characterization was previously carried out using different techniques (Sousa, S. R.; Moradas-Ferreira, P.; Melo, L. V.; Saramago, B.; Barbosa, M. A. Langmuir 2004, 20 (22), 9745-9754). Imaging and roughness analysis before and after FN adsorption used atomic force microscopy (AFM) in tapping mode, in air, and in magnetic alternating current mode, in liquid (water). FN adsorption as a function of time was followed by X-ray photoelectron spectroscopy (XPS), by radiolabeling of FN with 125I (125I-FN), and by ellipsometry. Exchangeability studies were performed using FN and HSA. AFM roughness analysis revealed that, before FN adsorption, both TiO2 surfaces exhibited a lower root-mean-square (Rq) and maximum peak with the depth of the maximum valley (Rmax) roughness in air than in water, due to TiO2 hydration. After protein adsorption, the same behavior was observed for the TiO2 sp substrate, while Rq and Rmax roughness values in air and in water were similar in the case of the TiO2 cp substrate, for the higher FN concentration used. Surface roughness was always significantly higher on the TiO2 cp surfaces. AFM led to direct visualization of adsorbed FN on both surfaces tested, indicating that after 10 min of FN incubation the TiO2 sp surface was partially covered by FN. The adsorbed protein seems to form globular aggregates or ellipsoids, and FN aggregates coalesce, forming clusters as the time of adsorption and the concentration increase. Radiolabeling of FN revealed that a rapid adsorption occurs on both surfaces and the amount adsorbed increased with time, reaching a maximum after 60 min of incubation. Time dependence is also observed for the evolution of the atomic (%) of N determined by XPS and by the increase of the thickness by ellipsometry. TiO2 cp adsorbs more FN than the TiO2 sp surfaces, after 60 min of adsorption, as shown by the radiolabeling data. FN molecules are also more strongly attached to the former surface as indicated by the exchangeability studies. The overall results provide novel evidence that FN spontaneously adsorbs as a self-assembly at TiO2 surfaces as a function of time. The aggregate structure is an intermediate feature shared by some protein fibrillar assemblies at interfaces, which is believed to promote cell adhesion and cytoskeleton organization (Pellenc, D.; Berry, H.; Gallet, O. J. Colloid Interface Sci. 2006, 298 (1), 132-144. Maheshwari, G.; Brown, G.; Lauffenburger, D. A.; Wells, A.; Griffith, L. G. J. Cell Sci. 2000, 113 (10), 1677-1686).     

Stereoselective interaction between DNA and chiral surfaces

ssDNA exhibits much different adsorption behaviors on enantiomer modified surfaces, which can be explained by the stereoselective H-bond interaction between DNA and the chiral surfaces. This effect not only may help to understand the stereospecific cell/substrate interaction and the origin of the chiral preference in nature but also brings novel insights to the study of DNA properties and the application in biochemical devices.     

Neutral and zwitterionic dopamine species adsorbed on silver surfaces: A DFT investigation of interaction mechanism

Biomolecules nondissociative adsorption on noble metals is a key process in metallic biosensors implying several questions related to the stability and orientation of such molecules. Here, the neurotransmitter dopamine (DA) adsorption on silver surface is investigated in the context of density functional theory (DFT). Two different dopamine isomers, the neutral (NDA) and zwitterionic (ZDA) species, and two different silver surfaces, Ag (110) and Ag(111), were considered. NDA shows relatively large binding energies, compared to previously studied π-π bonded systems. ZDA adsorbs even much more strongly although this species is less stable than NDA in vacuum. To elucidate the nature of the interaction between adsorbate and substrate, an electronic structure analysis was performed. Adsorbed NDA species suffers the loss of electronic charge, accompanied by a downshift of its molecular levels and the appearance of an attractive interaction of coulombic nature between adsorbate and substrate. The significant ZDA binding can be related to larger electron transfer and coupling between ZDA and Ag orbitals. Moreover, for both species, an important contribution of attractive noncovalent interactions of different degrees can be observed. The Ag substrate produces several modifications on NDA and ZDA vibrational frequencies. Noticeably relevant are the large red/blue shifts undergone by the N-H/O-H stretching bands of zwitterionic species, of up to −670/+430 cm⁻¹.     

The adsorption and dissociation of O2 on Cu low-index surfaces

The extended LEPS of O(2)-Cu single crystal plane systems is constructed by means of 5-MP (the 5-parameter Morse potential). Both the adsorption and dissociation of O(2) on Cu low-index surfaces are investigated with extended LEPS in detail. All critical characteristics of the system that we obtain, such as adsorption geometry, binding energy, eigenvalues for vibration, etc., are in good agreement with the experimental results. Our calculated results suggest there are many differences between O(2)-Cu (110) and O(2)-Pd (110) systems. On a Cu (110) surface, O(2) adsorbs in a tilted configuration and there are two lowest energy dissociation channels along the [001] and [10] directions, respectively. We speculate that the adsorption geometry of O(2) on the metal surfaces relates to the lattice constant of metal. Meanwhile, We use the concepts of the molecular dissociation limit and the surface dissociation distance to analyze again the dissociation mechanism of the O(2) on the low-index surfaces.     

Forces between hydrophilic surfaces adsorbed with apolipoprotein AII alpha helices

To provide better understanding of how a protein secondary structure affects protein-protein and protein-surface interactions, forces between amphiphilic alpha-helical proteins (human apolipoprotein AII) adsorbed on a hydrophilic surface (mica) were measured using an interferometric surface force apparatus (SFA). Forces between surfaces with adsorbed layers of this protein are mainly composed of electrostatic double layer forces at large surface distances and of steric repulsive forces at small distances. We suggest that the amphiphilicity of the alpha-helix structure facilitates the formation of protein multilayers next to the mica surfaces. We found that protein-surface interaction is stronger than protein-protein interaction, probably due to the high negative charge density of the mica surface and the high positive charge of the protein at our experimental conditions. Ellipsometry was used to follow the adsorption kinetics of this protein on hydrophilic silica, and we observed that the adsorption rate is not only controlled by diffusion, but rather by the protein-surface interaction. Our results for dimeric apolipoprotein AII are similar to those we have reported for the monomeric apolipoprotein CI, which has a similar secondary structure but a different peptide sequence and net charge. Therefore, the observed force curves seem to be a consequence of the particular features of the amphiphilic alpha-helices.