Structural characterization of Elisabatin B and Elisabatin C

X-ray structures of Elisabatin B (1) and Elisabatin C (2) have been determined. Crystal data for 1: Triclinic, P (No. 2), a = 7.528(2) Å, b = 9.404(2) Å, c = 11.414(2) Å, = 75.363(3)°, = 86.668(4)°, = 89.683(4)°, and Z = 2. Crystal data for 2: Monoclinic, P2₁/c (No. 14), a = 8.242(2) Å, b = 14.870(2) Å, c = 13.060(2) Å, = 101.458(3)°, and Z = 4. Both compounds are highly unsaturated leading to extended aromatic conjugation. They show different intermolecular O–HO hydrogen bonds, via which 1 forms dimers, and 2 zig-zag polymeric chains.     

Structure and properties of potential nonlinear optical materials

The synthesis, structure and properties of four ferrocene derivatives of 2-amino-1,2,3-triazole are reported. Solvatochromism is used as a screening process to assess the potential nonlinear optical behavior of these compounds. In general, this technique involves a number of assumptions, which may not be valid for organometallic complexes. Compound 3 crystallizes in space group P-1 with cell dimensions a = 5.771(2), b = 19.048(5), c = 19.343(5) Å and = 61.104(4), = 88.410(5), = 89.858(5)°; compound 5 crystallizes in space group P2₁/c with cell dimensions a = 12.545(2), b = 13.308(2), c = 20.513(4) Å and = 104.035(3)°; compound 9 crystallizes in space group P2₁/n with cell dimensions a = 12.599(4), b = 14.734(4), c = 13.619(5) Å, and = 107.63(2); compound 11 crystallizes in space group P-1 with cell dimensions a = 7.638(3), b = 9.619(4), c = 12.692(5) Å and = 77.588(7), = 78.416(7), = 71.357(7).     

Crystallographic characterization of N,N′-diarylformamidines bearing an alkoxy substituent at either the meta- or ortho-position

Crystal structures of four diphenylformamidines bearing phenyl substituents ortho-CH₃O (1), ortho-C₂H₅O (2), meta-CH₃O (3), and meta- ⁿ BuO (4) are reported. In each of the structures, formamidine exists as an unsymmetrical cyclic hydrogen bond dimer, and the geometry of the amidine unit is consistent with the localized C–N and C=N bonds. Interesting conformations due to the orientation of aryl groups were also observed. Crystal Data: 1, orthorhombic, Pbca, a = 11.297(1) Å, b = 15.092(1) Å, c = 16.380(2) Å, V = 2792.6(4) ų, Z = 8; 2, triclinic, P , a = 9.651(1) Å, b = 11.974(1) Å, c = 14.583(2) Å, = 101.789(2)°, = 99.320(2)°, = 99.048(2)°, V = 1595.9(3) ų, Z = 4; 3, orthorhombic, Pbca, a = 15.562(2) Å, b = 8.626(1) Å, c = 20.110(2) Å, V = 2699.4(5) ų, Z = 8; 4, monoclinic, P2₁/c, a = 14.525(2) Å, b = 15.534(2) Å, c = 8.818(1) Å, = 93.113(2)°, V = 1986.6(4) ų, Z = 4.     

Molecular structures of two conjugated ene-ynes derived from thiophene

The crystal structures of two conjugated ene-yne derivatives of thiophene are described, 2,5-di-(trimethylsilylethynyl)-3,4-dibromothiophene (1), is triclinic P witha=6.3281(4)Å,b=9.7421(6)Å,c=16.3669(9)Å; =80.516(5)°, =84.810(5)°, =74.072(5)°,Z=2,R=0.054; 2,3,4,5-tetra(trimethylsilylethynyl)thiophene (2), is monoclinic, P2₁/c with a=20.928(2)Å b=5.852(1)Å,c=23.907(2)Å; =100.245(6)°,Z=4,R=0.049. The ethynylic C atoms of both compounds lie near the thiophene plane, with deviations in the range 0.010(3)–0.455(4)Å. The phenyl groups of2 form a dihedral angle of 13.0(4)°.     

A new class of flexible energetic salts. Part 7: The structures of the guanidinium and hydroxyguanidinium salts of dinitramide

The crystal structures of two amine base salts of dinitramide, the guanidinium 1, and the hydroxyguanidinium 2, have been determined. 1 crystallizes in the triclinic space group with cell dimensions a = 8.325(2) Å, b = 9.301 (2) Å, c = 9.868(2) Å, = 84.73(3)°, = 69.25(3)°, = 67.55(3)°, while 2 crystallizes in the noncentric monoclinic space group Pc with cell dimensions a = 7.098 (2) Å, b = 3.5160 (10) Å, c = 14.358(3) Å, = 98.940(10)°. The structures of 1 and 2 contain protonated amine cations and dinitramide anions linked by hydrogen bonding. In both structures the conformations adopted by the dinitramine anions can be related to the types of hydrogen bonds it forms with the surrounding amine cations.     

The synthesis and structural characterization of silyl-substituted fluorenes

Three silyl-substituted fluorenes have been prepared by direct synthetic methods and structurally characterized by X-ray diffraction. The three silyl-substituted fluorenes studied were 9-trimethylsilylfluorene (1), 9-(tert-butyldimethyl)silylfluorene (2), and 2,7-di-tert-butyl-9-trimethylsilylfluorene (3). Complex 1 is orthorhombic, P2₁2₁2₁, a = 6.2681(14) Å, b = 14.329(3) Å, c = 15.231(4) Å, Z = 4. Complex 2 is monoclinic, P2₁/c, a = 12.1953(10) Å, b = 6.9977(6) Å, c = 19.6536(17) Å, = 93.818(2), Z = 4. Complex 3 is monoclinic, P2₁/c, a = 11.9954(9) Å, b = 9.8978(7) Å, c = 18.5464(13) Å, = 92.456(2), Z = 4. The long carbon–silicon bonds effectively remove any significant intramolecular interactions as little distortion is exhibited around the sp ³-carbon atom and the fluorenyl backbone demonstrates near planarity. The bulky silicon substituents also prevent intermolecular interactions, as only a few close contacts less than 4.0 Å exist in all three solid state structures.     

Cyclohexanone inclusion compounds of related multipedal hosts

The structures of the cyclohexanone inclusion compounds of (1) hexakis (3-hydroxy-3, 3-diphenyl-2-propynyl) benzene (H1) (triclinic, P1¯, a = 8.957(4), b = 16.69(1), c = 17.201(4) Å, = 93.82(3), = 97.61(3), and = 93.13(5)°); (2) 1,2,3,5,6,7-hexakis(3-hydroxy-3,3-diphenyl-2-propynyl)naphthalene (H2) (monoclinic, P2₁/n, a = 9.444(5), b = 18.353(5), c = 31.59(1) Å, and = 92.18(3)°) and (3) tetra(3-hydroxy-3,3-diphenyl-2-propynyl)ethylene (H3) (triclinic, P1¯, a = 14.208(2), b = 14.710(4), c = 17.915(2) Å, = 91.06(1), = 89.98(1), and = 110.60(2)°) have been determined. A second cyclohexanone inclusion compound with H1 with a different host to guest ratio (4: triclinic, P1¯, a = 9.512(2), b = 15.327(3),c = 16.151(3) Å, = 114.89(2), = 95.19(2), and = 102.67(2)°) was obtained from a 50:50 molar solution of cyclohexanone and 1,4-dioxane, which confirms the selectivity of this host for compounds with carbonyl functional groups. The thermal analysis results of all these cyclohexanone inclusion compounds are reported.     

A structural study on gallium and indium β-diketonates

In an attempt to prepare pentacoordinate chlorobis(-diketonato) gallium(III) and indium(III) complexes only the corresponding tris-products, Ga(PhCOCHCOPh)₃ (1), Ga(^tBuCOCHCO^tBu)₃ (1a), and In(PhCOCHCOPh)₃ (2), could be isolated. The crystal and molecular structures of 1 and 2 were determined. Both the complexes were found to have triclinc crystal system, with P1 space group. Cell parameters: 1 – a = 9.913(3) Å, b = 10.534(6) Å, c = 18.05(2) Å, = 93.86(5)°, = 94.40(4)°, = 106.58(4)°, V = 1805(2) ų, z = 2; 2 – a = 10.507(3) Å, b = 11.448(3) Å, c = 16.322(4) Å, = 107.38(2)°, = 97.38(2)°, = 102.23(2)°, V = 1792(1) ų, z = 2.     

Structures of Z-(nitrostilbene)chromium tricarbonyl complexes: The effect of metal coordination on the nonplanarity of the stilbene system

The structures of the nitrostilbene complexes Z-(4-R–C₆H₄–CH=CH–C₆H₄-4-NO₂)Cr(CO)₃ (R=Me₂N,1; H,2; F₃C,3), are reported. The copounds were prepared as part of a study of the synthesis of organometallic complexes with potential nonlinear optics applications. For Z-(4-Me₂N–C₆H₄–CH=CH–C₆H₄-4-NO₂)Cr(CO)₃,1, triclinic, ,a=7.214 (3) Å,b=7.340 (3) Å,c=17.238 (9)Å, =88.23 (5)°, =88.76 (4)°, =87.66 (3) °,Z=2. For Z-(C₆H₅–CH=CH–C₆H₄-4-NO₂)Cr(CO)₃,2, monoclinic, P2₁/C,a=12.255 (3) Å,b=9.415 (1) Å,c=13.579 (4) Å, =105.60 (2)°,Z=4. For Z-(4-F₃C–C₆H₄–CH=CH–C₆H₄-4-NO₂)Cr(CO)₃,3, triclinic, ,a=7.094 (2) Å,b=8.057 (5) Å,c=17.295 (9) Å, =87.95 (5)° =85.94 (4)°, =64.24 (5)°,Z=2. The structural data show that the Z isomers exhibit bond lengths and angles similar to those observed in the E isomers, but the stilbene fragment is considerably more nonplanar. As a consequence, these molecules are unlikely to behave as NLO materials.     

Synthesis, characterization, and crystal structure of 1-(4-chloro-benzoyl)-3-naphthalen-1-yl-thiourea

1-(4-Chloro-benzoyl)-3-naphthalen-1-yl-thiourea has been synthesized and characterized by elemental analysis, IR spectroscopy, and mass spectrometry. The crystal and molecular structure of the title compound has been determined from single crystal X-ray diffraction data. It crystallizes in the triclinic space group P-1, with a = 6.962(1) Å, b = 10.770(3) Å, c = 11.738(2) Å, = 65.76(2)°, = 80.03(1)°, = 84.86(2)°, and D _calc= 1.432 g cm^–1 for Z = 2. The thermal behavior of the compound has been studied by DTA and TG. The antibacterial activities of the title compound were investigated for three Gram (+) and two Gram (–) bacteria by employing broth microdilution method and subsequently, inhibitory activity against yeast-like fungi was also determined.     

Hydrogen-bonded coordination network in crystal structures of [Cu(3-PM)4Cl2] and [Cu(4-PM)4Cl]Cl, (PM = pyridylmethanol)

The crystal and molecular structures of [Cu(3-PM)₄Cl₂] (1) and [Cu(4-PM)₄Cl]Cl (2) have been determinated by X-ray crystallography. Complex 1 crystallizes in the triclinic system, space group P–1, with lattice parameters a = 7.972(2) Å, b = 8.293(2) Å, c = 10.707(2) Å, = 105.73(3)°, = 90.04(3)°, = 110.38(3)°, and Z = 1 at 100 K. The coordination geometry of each Cu atom is approximately octahedral formed by four nitrogen atoms of pyridine rings of 3-pyridylmethanol molecules in the equatorial plane and two chlorine atoms occupying the axial positions. The O—HsO, C—HsCl, and O—HsCl intermolecular hydrogen bonds and s stacking link the molecules in 3-D hydrogen-bonded coordination network. Complex 2 crystallizes in the tetragonal system, space group P4/n, with lattice parameters a = 10.464(1) Å, c = 11.339(2) Å, and Z = 2 at 217 K and a = 10.352(1) Å, c = 11.201(2) Å, and Z = 2 at 293 K. The coordination geometry of Cu atom in the [Cu(4-PM)₄Cl]⁺ ion is approximately square pyramidal formed by four nitrogen atoms of pyridine rings of 4-pyridylmethanol molecules in equatorial plane and one chlorine atom in axial position. The O—HsCl and C—HsCl intermolecular hydrogen bonds link the molecules in 2-D hydrogen-bonded coordination network.     

Synthesis and crystal structure of 1-(1′,3′-dimethyl-5′-chloropyrazol-4′-carbonyl′-3-(2′-chlorophenyl)-5-amino-4-cyanopyrazole

The title compound 1-(1,3-dimethyl-5-chloropyrazol-4-carbonyl)-3-(2-chlorophenyl)-5-amino-4-cyanopyrazole (C₁₆H₁₂Cl₂N₆O) has been synthesized and characterized by X-ray diffraction: Triclinic, space group P1, with a = 8.6712(8) Å, b = 9.5091(10) Å, c = 11.2170(11) Å = 71.531(2)°, = 84.683(2)°, = 74.099(2)° Z = 2; V = 843.7(14) ų. C(10), O(1), C(11), and N(2) atoms are coplanar with the average deviation of 0.0071 Å, which form 11.03° and 43.93° dihedral angles with pyrazole planes (I) and (II), respectively.     

Crystal structures and energy refinement of some 2,2′-disubstituted biphenyl compounds

Synthesis and structural determination by X-ray crystallography of three substituted biphenyl structures are reported: (2) is monoclinic P2₁/n witha=10.805(4),b=8.079(3),c=16.232(6)Å, =100.96(5)°: (4) is monoclinic P2₁/n witha=9.966(3),b=10.007(3),c=13.053(4) Å, =96.74(5)°; (5) is triclinic witha=12.033(5),b=16.903(8),c=9.752(4)Å, =94.70(3)°, =112.56(3)° =76.12(3)°. In all compounds the biphenyl has two identical substituents in an ortho position to the center inter-ring bond and present variable inter-ring twist angles. In the process of investigating molecular geometry, we are interested in studying whether the calculated conformations of our molecules can fit the crystallographic structures.     

Mercury(II) halide complexes with N-donor organic ligands: crystal and molecular structure of HgI2R, R = 1,10-phenanthroline, 2,9-dimethyl-1,10-phenanthroline, bipyridine

The synthesis, characterization and single crystal X-ray structure of three compounds of general formula HgI₂R (R = phen[1], dmph [2] and bpy[3]) are presented. The crystal data for the three compounds are: [1], triclinic, space group P (#2) a = 7.902(2), b = 9.479(2), c = 10.002(2) Å, = 91.45(2), = 111.34(2), = 100.82(2)° [2]: monoclinic, space group C2/c (#15) a = 15.670(3), b = 11.640(2), c = 9.730(2) Å, = 114.57(3)° [3]: triclinic, space group P1¯ (#2) a = 9.472(1), b = 9.507(1), c = 9.023(1) Å, = 98.46(1), = 102.89(1), = 119.62(1)°. Compounds [1] and [2] are monomers, with highly distorted tetrahedral environments around Hg. In [3], instead, there is a significant intermolecular I···Hg interaction leading to the formation of softly bound dimers linking two pentacoordinated cations. The structure is compared with related ones in the literature.     

Synthesis and structure of 1,12-bis-(N-naphthalamido)-4,9-bis-(2,4,6-trimethylbenzenesulfonyl)-4,9-diaza-dodecane

1,12-Bis-(N-naphthalamido)-4,9-bis-(2,4,6-trimethylbenzenesulfonyl)-4,9-diaza-dodecane 1 was obtained from 1,8-naphthalic anhydride on successive reactions with 3-aminopropanol, 4-methylbenzenesulfonyl chloride and 1,4-bis-(2,4,6-trimethylbenzenesulfonamido)butane. The molecular structure of 1 was investigated by X-ray crystallography, NMR, and mass spectrometry. The molecule crystallizes in the triclinic space group, . The cell parameters are a = 8.1548(12), b = 15.878(3), c = 18.005(3) Å, = 97.685(10), = 93.260(15), and = 101.754(11)°. The asymmetric unit consists of the halves of two independent molecules, with Z = 2.     

Two-dimensional nickel(II) tetraaza macrocyclic complex linked by hydrogen bonds

The complex [Ni(L)](PDC) 2H₂O (L = 3,14-dimethyl-2,6,13,17-tetraazatricyclo[16,4, 0^1.18,0^7.12]docosane; PDC = 3,5-pyrazoledicarboxylate) has been synthesized and characterized by X-ray crystallography. It crystallizes in the monoclinic system P2₁/c with a = 9.739(4) Å, b = 10.491(3) Å, c = 16.884(3) Å, = 97.17(2)°, V = 1711.5(8) ų, Z = 4. The coordination environment around the nickel(II) ion exhibits a slightly distorted square-plane with four secondary amines of the macrocycle. The title compound is interconnected to give a two-dimensional network through the hydrogen-bonding interactions.     

Syntheses and structural characterization of two novel α-diketone bisacylhydrazones

Benzil bis(3,4,5-trimethoxybenzohydrazone) (I) and 3,3-dimethoxybenzil bis(benzohydrazone) (II) were synthesized by condensation, acid catalyzed, of the proper -diketone and the corresponding hydrazide. Compound I crystallizes in the monoclinic system, space group P2₁/n, with a = 11.464(2), b = 21.098(4), c = 13.837(2) Å, = 109.50(1)° V = 3154.8(9) ų and D _c = 1.319 g/cm³ for Z = 4. Compound II crystallizes in the triclinic system, space group P , with a = 11.106(3), b = 11.728(10), c = 10.656(5) Å, = 91.86(2), = 92.68(3), = 110.00(2)° V = 1301.1(7) ų and D _c = 1.293 g/cm³ for Z = 2.     

The crystal and molecular structures of highly substituted cubanes: 1,2,4,7-tetra(carboxymethyl)cubane and 1,2,3,5,7-penta(carboxymethyl)cubane

The structures of the title compounds, 1,2,4,7-tetra(carboxymethyl)cubane 1 and 1,2,3,5,7-penta(carboxymethyl)cubane2, have been determined.1 crystallized in the space group with cell dimensionsa=6.098(2),b=10.686(2),c=13.459(2) Å, =69.82(1), =77.01(1), =74.00(1)°, while2 crystallized in the monoclinic space group P2₁/c with cell dimensionsa=15.139(2),b=12.775(1),c=9.849(2) Å, =107.01(1)°. These molecules were derived from their parent carboxylic acids by esterification with methanol. They are unusual for several reasons. The first is that they both contain substituents on adjacent carbon atoms in the cubane framework. There are only a few reports in the literature of this type of cubane structure. The second molecule is unique in that it has five substituents attached to a cubane moiety. This is the one of the few cubane derivatives with more than four substituents to be structurally characterized and results in a cubane molecule in which there are three faces with three substituents and three faces with only two substituents.     

The crystal and molecular structure of bis(melamine)silver(I) perchlorate, Ag(C3H6N6)2ClO4

The crystal structure of the title compound, Ag(mela)₂ClO₄ (mela = melamine), has been investigated by X-ray diffraction techniques, the crystals are triclinic, space group P1¯, with a = 5.236(2), b = 7.5385(9) c = 19.063(3) Å, = 99.91(1), = 90.53(2), = 108.32(2)° and Z = 2. The Ag atom has a coordination geometry with two strong bonds (2.162(2) and 2.179(4) Å) to the nitrogen of the melamines and two weak bonds (2.776(4) and 2.785(4) Å) to oxygen atoms of the ClO^– ₄anions. The N—Ag—N vector is markedly nonlinear (angle at Ag 167.7(2)°).     

A study of two geometric isomers of 1,1′-bi-3-cyanocyclohex-2-enylidene

The preparation, separation, crystal structure and ¹H NMR spectra are reported for the two geometrical isomers of 1,1-bi-3-cyanocyclohex-2-enylidene. The E-isomer crystallized as thin plates in the monoclinic space group P2₁/n with a = 5.3980(5), b = 7.0757(7), c = 15.300(2) Å, = 94.571(2)°, and Z = 2. The structure has symmetry C_2h. The Z-isomer crystallized as needles in the triclinic space group P1¯ with a = 7.0790(6), b = 11.3155(9),c = 15.386(1) Å, = 104.943° = 90.164(2)°, = 99.494(2)°, and Z = 4. The compound crystallized with two molecules per asymmetric unit. In C₆D₆, ¹H NMR signals of the 2-vinyl protons appear almost identical. However, in a mixture of C₆D₆ and pyridine-d ₅, the 2-vinyl protons can be distinguished. The structures compare favorably with MM2 calculations.