Theoretical studies of Cu(I) sites in faujasite and their interaction with carbon monoxide

Sitting, coordination, and properties of Cu(I) cations in zeolite faujasite are investigated using a combined quantum mechanics-interatomic potential function method. The coordination of Cu(I) ions depends on their location within the zeolite lattice. Cu(I) located inside the hexagonal prisms (site I') and in the plane of six-membered aluminosilicate rings on the walls of sodalite units (site II) is threefold coordinated, whereas Cu(I) located in the supercages (site III) is twofold coordinated. In agreement with available experimental data Cu(I) appears to be more strongly bound in sites I' and II than in site III. The binding energy of site II Cu(I) ions increases with the number of Al atoms, but only closest Al atoms have a substantial influence. The CO molecule binds more strongly onto sites with weaker bound cations and lower coordination. We assign the two CO stretching IR bands observed for Cu(I)-Y zeolites to sites II with one Al (2157-2161 cm(-1)) and two Al atoms (2140-2148 cm(-1)) in the six-membered aluminosilicate ring. For Cu(I)-X we tentatively assign the high frequency band to site III (2156-2168 cm(-1)) and the low-frequency band to site II with three Al atoms in the six-membered ring (2136-2138 cm(-1)).     

不同硅铝比的MCM-22分子筛的气相硅烷化处理

对不同硅铝比的MCM-22分子筛进行气相硅烷化处理,并采用X射线衍射、固体核磁、N₂吸附-脱附和甲苯吸附等技术对样品进行了表征. 结果显示,原料硅铝比为50~100的MCM-22分子筛均可以利用气相硅烷化,在不脱除骨架铝的基础上,将Si(OH)₂柱撑结构引入其层间超笼系统,从而使层间距增大,孔体积增加; 将密度泛函理论用于计算硅烷化前后的MCM-22分子筛的N₂吸附等温线,成功得到十元环孔道和超笼体系的比表面积和孔体积,发现气相硅烷化使MCM-22分子筛超笼体系的比表面积和孔体积增大,而十元环孔道减小.另外,气相硅烷化可有效提高不同硅铝比MCM-22分子筛的甲苯平衡吸附量.     

Density functional calculations on the distribution, acidity, and catalysis of Ti(IV) and Ti(III) ions in MCM-22 zeolite

Isolated Ti species in zeolites show unique catalytic activities for a variety of chemical reactions. In this work, density functional calculations were used to explore three current concerns: 1) the distributions of Ti(IV) and Ti(III) ions in the MCM-22 zeolite; 2) the Lewis acidity of the Ti(IV) and Ti(III) sites; and 3) activation of alkane C-H bonds by photocatalysis with Ti-doped zeolites. Neither the Ti(IV) nor Ti(III) ions are randomly distributed in the MCM-22 zeolite. The orders of relative stability are very close for the eight Ti(IV) and Ti(III) sites, and the T3 site is the most probable in both cases. The wavelengths for Ti(IV)-Ti(III) excitations were calculated to lie in the range λ=246.9-290.2 nm. The Ti3(IV) site shows Lewis acidity toward NH(3) in two different modes, and these two modes can coexist with each other. The calculated Ti(IV) coordination numbers, Ti(IV)-O bond elongations, and charge transfers caused by NH(3) adsorption are in good agreement with previous results. Similarly, two different NH(3) adsorption modes exist for the Ti3(III) site; the site that exhibits radical transfer from the lattice O to N atoms is preferred due to the higher adsorption energy. This indicates that the Ti3(III) site does not show Lewis acidity, in contrast to the Ti3(IV) site. At the Ti3(III) site, the energy barrier for activating the methane C-H bond was calculated to be 33.3 kJ mol(-1) and is greatly reduced by replacing the hydrogen atoms with methyl groups. In addition, the reactivity is improved when switching from MCM-22 to TS-1 zeolite. The studies on the various Ti species reveal that lattice O atoms rather than Ti(III) radicals are crucial to the activation of alkane C-H bonds. This work provides new insights into and aids understanding of the catalysis by isolated Ti species in zeolites.     

Mononuclear-dinuclear equilibrium of grafted copper complexes confined in the nanochannels of MCM-41 silica

Following the structural concept of copper-containing proteins in which dinuclear copper centers are connected by hydroxide bridging ligands, a bidentate copper(II) complex has been incorporated into nano-confined MCM-41 silica by a multistep sequential grafting technique. Characterization by a combination of EPR spectroscopy, X-ray photoelectron spectroscopy (XPS), UV/Vis spectroscopy, IR spectroscopy , and solid-state (13)C and (29)Si cross-polarization magic-angle spinning (CP-MAS) NMR suggests that dinuclear Cu complexes are bridged by hydroxide and other counterions (chloride or perchlorate ions), similar to the situation for EPR-undetectable [Cu(II)···Cu(II)] dimer analogues in biological systems. More importantly, a dynamic mononuclear-dinuclear equilibrium between different coordination modes of copper is observed, which strongly depends on the nature of the counterions (Cl(-) or ClO(4)(-)) in the copper precursor and the pore size of the silica matrix (the so-called confinement effect). A proton-transfer mechanism within the hydrogen-bonding network is suggested to explain the dynamic nature of the dinuclear copper complex supported on the MCM-41 silica.     

Role of the Tyr-Cys cross-link to the active site properties of galactose oxidase

The catalytically relevant, oxidized state of the active site [Cu(II)-Y·-C] of galactose oxidase (GO) is composed of antiferromagnetically coupled Cu(II) and a post-translationally generated Tyr-Cys radical cofactor [Y·-C]. The thioether bond of the Tyr-Cys cross-link has been shown experimentally to affect the stability, the reduction potential, and the catalytic efficiency of the GO active site. However, the origin of these structural and energetic effects on the GO active site has not yet been investigated in detail. Here we present copper and sulfur K-edge X-ray absorption data and a systematic computational approach for evaluating the role of the Tyr-Cys cross-link in GO. The sulfur contribution of the Tyr-Cys cross-link to the redox active orbital is estimated from sulfur K-edge X-ray absorption spectra of oxidized GO to be about 24 ± 3%, compared to the values from computational models of apo-GO (15%) and holo-GO (22%). The results for the apo-GO computational models are in good agreement with the previously reported value for apo-GO (20 ± 3% from EPR). Surprisingly, the Tyr-Cys cross-link has only a minimal effect on the inner sphere, coordination geometry of the Cu site in the holo-protein. Its effect on the electronic structure is more striking as it facilitates the delocalization of the redox active orbital onto the thioether sulfur derived from Cys, thereby reducing the spin coupling between the [Y·-C] radical and the Cu(II) center (752 cm(-1)) relative to the unsubstituted [Y·] radical and the Cu(II) center (2210 cm(-1)). Energetically, the Tyr-Cys cross-link lowers the reduction potential by about 75 mV (calculated) allowing a more facile oxidation of the holo active site versus the site without the cross-link. Overall, the Tyr-Cys cross-link confers unique ground state properties on the GO active site that tunes its function in a remarkably nuanced fashion.     

Crystal structures of the NO and N2O4 sorption complexes of fully dehydrated fully Cd2+-exchanged zeolite X (FAU): coordination of neutral NO and N2O4 to Cd2+

The structures of the nitric oxide and dinitrogen tetroxide sorption complexes of dehydrated fully Cd2+-exchanged zeolite X (FAU) have been determined using single-crystal X-ray diffraction in the cubic space group Fdm at 21(1) degrees C. Ion exchange was accomplished by allowing an aqueous stream 0.05 M in Cd2+ to flow past each crystal for 5 days. Each crystal was then dehydrated at 500 degrees C and 2 x 10(-6) Torr for 2 days, followed by exposure to 100 Torr of zeolitically dry NO or NO2/N2O4 gas. The structures were determined in these atmospheres. The unit cell constants at 21(1) degrees C are 24.877(2) A for the dark-yellow NO complex, |Cd46(NO)16|[Si100Al92O384]-FAU, and 24.735(2) A for the black N2O4 complex, |Cd46(N2O4)25.5|[Si100Al92O384]-FAU. The structure of the NO complex was refined to R1 = 0.072 and wR2 = 0.134. In this structure, Cd2+ ions occupy four crystallographic sites. Fifteen Cd2+ ions occupy site I (at the centers of the double 6-rings (D6Rs)), and one occupies site I' (in the sodalite cavity opposite a D6R). The remaining 30 Cd2+ ions occupy two different sites II (near 6-rings in the supercages): 16 coordinate to nitric oxide molecules and 14 do not. Sixteen NO molecules lie in the supercage where each interacts weakly with a Cd2+ ion: Cd-N = 2.57(22) A. The observed N-O bond distance is 1.28(25) A and Cd-N-O is 118(10) degrees. The structure of the N2O4 complex was refined to R1 = 0.084 and wR2 = 0.216. In this structure, Cd2+ ions occupy only three crystallographic sites. The 16 D6Rs per unit cell are filled with 11.5 Cd2+ ions at site I and 9 Cd2+ ions at site I': 11.5 + 9/2 = 16. The remaining 25.5 Cd2+ ions occupy site II where each coordinates at 2.43(8) A to a nitrogen atom of a N2O4 molecule. At the coordinating nitrogen atom, O-N-O is 147(10) degrees and the N-O bond lengths are 1.07(9) and 1.23(10) A. At the second nitrogen atom, O-N-O is 140(10) degrees, and the N-O bond lengths are 1.03(13) and 1.42(12) A. The imprecisely determined N-N bond length, 2.74(17) A, appears to be very much lengthened by coordination to Cd2+. The Cd-N-N angle is 144(10) degrees. This appears to be the first crystallographic report of the coordination of N2O4 to a cation.     

Molecular dynamics simulation of the cation motion upon adsorption of CO2 in Faujasite zeolite systems

Molecular Dynamics simulations have been carried out in NaX and NaY Faujasite systems to deepen understanding of the cation rearrangement during the CO2 adsorption process suggested by our recent diffusivity measurements. This study is a major contribution since the rearrangement of the cations in Faujasite, the most promising adsorbent for CO2 storage, can represent a significant breakthrough in understanding the adsorption and diffusion processes at the mircroscopic scale. For NaY, it has been shown that at low and intermediate loadings, SII cations can migrate toward the center of the supercage due to strong interactions with the adsorbates, followed by a hopping of SI'cation from the sodalite cage into the supercage to fill the vacant SII site. The SI cations are only displaced at a higher loading, leading to cation de-trapping out of the double six rings into the vacant SI' sites. For NaX, the SIII' cations which occupy the most accessible adsorption sites move significantly upon coordination to the carbon dioxide molecules. The SI' and SII cations remain consistently located in their initial sites whatever the loading. Indeed, the most probable migration mechanism involves SIII' cation displacements into nearby vacant SIII' sites.     

A series of new phases in the alkali metal-Nb(V)/Ta(V)-Se(IV)/Te(IV)-O systems

Six new phases in the alkali metal-Nb(V)/Ta(V)-Se(IV)/Te(IV)-O systems have been prepared by solid-state reactions at high-temperatures. Their structures were determined by single-crystal X-ray diffraction studies. AM(3)O(6)(QO(3))(2) (A = K, Rb, M = Nb, Ta, Q = Te; A = K, M = Nb, Q = Se) are isomorphous and their structures feature a 3D network with 1D 4- and 6-MRs tunnels along the a-axis which is composed of 2D layers of corner-sharing MO(6) octahedra bridged by QO(3) groups. The alkali metal ions are located at the above 1D tunnels of 6-MRs. The structure of Cs(3)Nb(9)O(18)(TeO(3))(2)(TeO(4))(2) features a thick Nb-Te-O layer built of corner-sharing NbO(6) octahedra, TeO(3) and TeO(4) groups. The 2D layer of the NbO(6) octahedra with 1D tunnels of 6-MRs along the c-axis are formed by 1D chains of NbO(6) chains along the c-axis and linear Nb(4)O(21) tetramers by corner-sharing. The TeO(3) and TeO(4) groups are grafted on both sides of the niobium-oxide layer via Nb-O-Te or/and Te-O-Te bridges. The caesium(i) ions are located at the above 1D tunnels of 6-MRs. TGA, UV-vis and infrared spectral measurements as well as electronic structure calculations have also been performed.     

Speciation of CuO in MCM-41 during oxidation of naphthalene

By extended X-ray absorption fine structural (EXAFS) spectroscopy, copper oxide clusters with a square-plane structure are found in the channels of mesoporous molecular sieve MCM-41. Bond distances of Cu–O and Cu–Cu are 1.90 and 2.80 Å, respectively. Oxidation of naphthalene at 723 K for 4 h in MCM-41 leads to structural perturbation of the clusters (e.g., Cu–O: −0.02 Å and Cu–Cu: +0.02 Å) with little change in their coordination numbers.     

n- and isoalkane adsorption mechanisms on zeolite MCM-22

Low-coverage adsorption properties (Henry constants, adsorption enthalpy, and entropy) of linear and branched alkanes (C3-C8) on zeolite MCM-22 were determined using the chromatographic technique at temperatures between 420 and 540 K. It was found that adsorption enthalpy and entropy of linear alkanes vary in a nonmonotonic way with carbon number. The adsorption behavior of alkanes was rationalized on the basis of the pore geometry. Short molecules prefer to reside in the pockets of the MCM-22 supercage, where they maximize energetic interaction with the zeolite. Longer molecules reside in the larger central part of the supercage. For carbon numbers up to six, singly branched alkanes are selectively adsorbed over their linear counterparts. This preference originates from the entropic advantage of singly branched molecules inside MCM-22 supercages, where these species have high rotational freedom because of their small length.     

Potassium Phthalocyanine, KPc: one-dimensional molecular stacks bridged by K+ ions

We report the synthesis of potassium phthalocyanine (KPc) and its structural characterization by synchrotron X-ray powder diffraction. We find that while KPc adopts the beta-polymorphic structural type (monoclinic space group P21/a) common for many MPc solids, its structure is characterized by unique features. The K+ ions, which are statistically disordered over two symmetry-equivalent positions, reside in the intrastack spacing of the rodlike molecular assemblies and strongly bond equidistantly to selected N atoms of the two neighboring Pc rings along the chain direction with an unusual 5-fold coordination. The K+-stuffed slipped stacks of Pc units display much greater intrastack and slippage distances than those of other beta-MPc polymorphs. They may be thought as comprising disordered dimeric (Pc)22- units; this leads to electron pairing and is consistent with the observed nonmagnetic response of the system.     

Pathway from chain to dimer in Cu(I) camphor hydrazone complexes

The chemical reactivity, molecular structure, and surface characteristics of Cu(I) camphor hydrazone compounds indicate that exist a structural pathway for conversion of coordination polymers into dimers and vice versa. By X-ray diffraction analysis two polymorphic forms of the chain compound [{CuCl}(2)(Me(2)NNC(10)H(14)O)](n) were identified that essentially differ in the structural arrangement and geometry of the non-linear copper atom. The characterization of the dimer complexes [{Cu(Me(2)NNC(10)H(14)O)}(2)(μ-X)(2)] (X = Cl or Br) was also achieved by X-ray diffraction analysis showing the unusual arrangement of the camphor hydrazone ligands that occupy the same side of the molecule. Bond lengths and torsion angles show that one of the polymorphic forms is structurally close to the related dimer. The surface composition of the coordination polymers [{CuX}(2)(YNC(10)H(14)O)](n) (X = Cl, Y = NMe(2), NH(2); X = Br, Y = NH(2)) and dimers [{Cu(Me(2)NNC(10)H(14)O)}(2)(μ-X)(2)] (X = Cl or Br) studied by X-ray Photoelectron Spectroscopy corroborate the molecular properties and the reactivity trend.     

噻吩分子及其与异辛烷二元混合物在MCM-22分子筛中吸附的蒙特卡罗模拟

应用巨正则蒙特卡罗模拟方法研究了噻吩分子以及噻吩与异辛烷混合物在MCM-22分子筛中的吸附和分布. 通过模拟获得了噻吩分子在MCM-22分子筛中不同温度(298、363 和393 K)下的吸附等温线和等量吸附热, 以及298 K时噻吩和异辛烷分子二元混合物在MCM-22分子筛中的吸附及分布情况. 结果表明, 吸附温度和吸附压力对噻吩分子在MCM-22分子筛吸附都有影响, 但等量吸附热受温度和吸附量影响较小. 对于二元混合物的吸附, 噻吩和异辛烷在分子筛中存在竞争吸附过程, 噻吩能够大量吸附在MCM-22分子的十元环和超笼中, 而异辛烷主要吸附在MCM-22分子筛的超笼系统, 从而可以将噻吩分子与异辛烷分子分离开来.     

Formation and stability of cellulose–copper–NaOH crystalline complex

We investigated the crystal structure of alkali-celluloses, Na-cellulose IIA and II(Cu), formerly known as Na-cellulose IIB, by synchrotron X-ray diffraction. Na-cellulose IIA, formed from cellulose I by high-concentration NaOH treatment, has a fiber repeat of 15 Å and a threefold-like helical conformation. Na-cellulose II(Cu), prepared by treating cellulose I with copper-saturated alkali solution, also has a fiber repeat of 15 Å with threefold helical symmetry. Incorporation of Cu(II) ions into cellulose was confirmed by multiwavelength anomalous diffraction. Monitoring by X-ray diffraction revealed that the formation of this complex from cellulose I is remarkably slow, probably because of the involvement of copper ion. The stability of alkali-cellulose II(Cu) was tested to estimate the influence of the presence of copper in the crystal. Na-cellulose II(Cu) characteristically dissolved in aqueous ammonia solution, indicating strong coordination of copper ion to cellulose.     

Dioxygen activation at a single copper site: structure, bonding, and mechanism of formation of 1:1 Cu-O2 adducts

To evaluate the fundamental process of O(2) activation at a single copper site that occurs in biological and catalytic systems, a detailed study of O(2) binding to Cu(I) complexes of beta-diketiminate ligands L (L(1) = backbone Me; L(2) = backbone tBu) by X-ray crystallography, X-ray absorption spectroscopy (XAS), cryogenic stopped-flow kinetics, and theoretical calculations was performed. Using synchrotron radiation, an X-ray diffraction data set for L(2)CuO(2) was acquired, which led to structural parameters in close agreement to theoretical predictions. Significant Cu(III)-peroxo character for the complex was corroborated by XAS. On the basis of stopped-flow kinetics data and theoretical calculations for the oxygenation of L(1)Cu(RCN) (R = alkyl, aryl) in THF and THF/RCN mixtures between 193 and 233 K, a dual pathway mechanism is proposed involving (a) rate-determining solvolysis of RCN by THF followed by rapid oxygenation of L(1)Cu(THF) and (b) direct, bimolecular oxygenation of L(1)Cu(RCN) via an associative process.     

4,6-bis(supermesitylphosphanylidenemethyl)dibenzofuran. Synthesis, X-ray structure and reactivity towards group 11 metals

New kinetically stabilized mono- and bis-phosphaalkene ligands (2 and 3, respectively) were synthesized via the phospha-Wittig approach. Ligand 3 was characterized by X-ray diffraction. The coordinating behaviour of the bidentate ligand was investigated towards group 11 metal centers in order to test its capacity to bind two coordination sites located in a trans-fashion. The [Au(3)][BF4], [Ag(3)(H2O)][BF4] and [Cu(3)(CH3CN)][BF4] complexes 4 , 5 and 6, respectively, were characterized by X-ray diffraction. The peculiar geometries of 4 and 6 were rationalized by means of DFT calculations.     

Synthesis,structure and electrochemical behavior of an organic-inorganic hybrid compound based on Dawson-type polyoxometalates

An organic-inorganic hybrid compound constructed from Wells-Dawson polyanion clusters and metal-organic complex subunits, [Cu(phen)₃][Cu(phen)₂Cu(phen)₂(P₂W₁₈O₆₂)]·2H₂O (1) has been prepared hydrothermally and characterized by elemental analysis, IR, UV, cyclic voltammetry (CV) and single-crystal X-ray diffraction. Crystal structural analysis indicates that two terminal oxygen atoms of the Wells-Dawson polyanion located in the “belt” site coordinate with Cu²⁺. Three Cu ions have different coordination environments: Cu1 and Cu2 are five-coordinate, while Cu3 is six-coordinate. The bisupporting polyoxoanions [Cu(phen)₂Cu(phen)₂(P₂W₁₈O₆₂)]^2? are polymerized into a 1D chain by hydrogen bonding interactions, then the chains are stacked into a two-dimensional structure via offset, face-to-face, π ··· π stacking interactions. CV reveals that 1 exhibits three chemically-reversible processes.     

A selective chemosensor for detection of Ag(I) and Cu(I) based on an acenaphthoquinone derivative and its complexes

A new Schiff base, acenaphthoquinone bis(diphenylmethlenehydrazone) (L), was synthesized and employed as a chemosensor for detecting Ag(I) and Cu(I). Experimental results showed that the chemosensor exhibited high selectivity and sensitivity. The sensitivity of the chemosensor for Ag(I) or Cu(I) was not affected by other metal ions, such as Ni(II), Nd(III), Zn(II), Fe(III), Cu(II), Na(I), La(III), K(I), and Co(II). Complexes 1 and 2 were synthesized by coordination of L with Ag(I) and Cu(I), respectively. The crystal structures of 1 and 2 were determined by single-crystal X-ray diffraction. They had the same space group P2₁/c. Based on theoretical calculation, mechanism of the chemosensor detecting Ag(I) and Cu(I) was suggested.     

Cu-Pd/MCM-22催化剂上二甲醚低温水解反应

 考察了分子筛的类型、硅铝比及Cu和Pd改性对分子筛催化剂上二甲醚低温水解活性的影响. 结果表明,酸性的MCM-22和HZSM-5分子筛催化剂具有较高的二甲醚水解活性,且其活性随着分子筛硅铝比的增加而降低. 这表明分子筛的类型及酸性对催化剂性能有重要影响,具有超笼结构的MCM-22分子筛上B酸中心的良好可接近性,使得该分子筛催化剂的水解活性较相同硅铝比的HZSM-5分子筛高. 与改性前相比, Cu和Pd改性后的MCM-22催化剂显示出更高的二甲醚水解活性.     

Synthesis,characterization and crystal structures of dinuclear macrocyclic Schiff base copper(I) complexes bearing different bridges

Utilizing a new 20-membered macrocyclic Schiff base ligand with two coordination sites formed from the [2+2] condensation of 1,3-diaminopropane and benzene-1,3-dicarboxaldehyde in the presence of CuX (X = Cl⁻, Br⁻, I⁻) salts, air-stable dicopper(I) complexes were synthesized in acetonitrile, intramolecularly linked via two halide groups, and characterized by different physico-chemical techniques. The single crystal X-ray diffraction technique indicates these complexes consist of two N₂X₂ donor sets that have distorted tetrahedral coordination environments around the copper(I) ions. In these halogen-bridged binuclear Cu₂LX₂ systems the Cu?Cu separation can be controlled, as this distance is reduced on increasing the halide size and hence the X?X repulsion, with the rigidity of the macrocycle playing a significant role.