Vibrational spectra and structure of CH3Cl:NO complex: IR matrix isolation and DFT study

Infrared spectra of the CH(3)Cl:NO complex isolated in solid neon have been investigated. Most of the vibrational modes of the complex have been detected. The weak interaction between NO and CH(3)Cl in CH(3)Cl:NO is responsible for small shifts of the vibrational mode frequencies of both CH(3)Cl and NO molecules. The measured shifts range between -3.2 and + 3.8 cm(-1). On the basis of DFT calculations, different geometries have been explored for the complex, and it has been shown that the most stable structure is of C(1) symmetry. The calculated frequency shifts match well the experimental data.     

Infrared spectra and theoretical study ofE-3-(2-R-vinyl)-2-benzothiazolinones

The C=O stretching frequencies ofE-3-(2-R-vinyl)-2-benzothiazolinones (1 a–1 p) were measured in CCl₄ and CHCl₃ and correlated with ⁺ and * substituent constants. Thev(C=O) vs * (R) correlation was compared to an analogical relationship obtained with 3-R-2-benzothiazolinones (2). The electronic structure and geometry of compounds was investigated by CNDO/2 and PCILO methods. The results of both the spectral and theoretical studies showed forE-3-(2-R-vinyl)-2-benzothiazolinones a preference of the N—C-s-cis conformation (3), in which the substituent effects are transmitted to the C=O group very efficiently. The transmission factor for the CH=CH group was determined according to the definition ofJaffé. The role of inductive effects, delocalization of the nitrogen lone-pair electrons as well as the through-space interaction between the C=O and C=C bonds is discussed in terms of transmission mechanism and structural properties.

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Infrarotspektren und theoretische Untersuchungen vonE-3-(2-R-vinyl)-2-benzo-thiazolinonen

Zusammenfassung Es wurden die C=O-Streckfrequenzen vonE-3-(2-R-vinyl)-2-benzothiazolinonen (1 a–1 p) in CCl₄ und CHCl₃ gemessen und mit -, ⁺- und *-Substitutionskonstanten korreliert. Diev(C=O)-*-Korrelation wurde mit einer analogen Beziehung für 3-R-Benzothiazolinonen (2) verglichen. Die elektronische Struktur und die Geometrie der Verbindungen wurden mittels CNDO/2- und PCILO-Berechnungen untersucht. Es ergab sich dabei sowohl aus den spektros-kopischen als auch aus den theoretischen Ergebnissen eine N—C-s-cis-Konformation (3) für dieE-3-(2-R-vinyl)-2-benzothiazolinone, da dies eine günstige Geometrie zur Übermittlung von Substitutionseffekten zur C=O-Gruppe ergibt. Der Transmissionsfaktor für die CH=CH-Gruppe wurde nach der Definition vonJaffé bestimmt. Die Rolle von induktiven Effekten, der Delokalisierung des freien Elektronenpaares am Stickstoff und der C=O....C=C-Wechselwirkungen durch den Raum wurde auf Basis von Transmissionsmechanismen und strukturellen Eigenschaften diskutiert.

     

Structure, energy, and IR spectra of I2*-.nH2O clusters (n=1-8): a theoretical study

The authors report theoretical results on structure, bonding, energy, and infrared spectra of iodine dimer radical anion hydrated clusters, I(2) (-).nH(2)O (n=1-8), based on a systematic study following density functional theory. Several initial guess structures are considered for each size cluster to locate minimum energy conformers with a Gaussian 6-311++G(d,p) split valence basis function (triple split valence 6-311 basis set is applied for iodine). It is observed that three different types of hydrogen bonded structures, namely, symmetrical double hydrogen bonding, single hydrogen bonding, and interwater hydrogen bonding structures, are possible in these hydrated clusters. But conformers having interwater hydrogen bonding arrangements are more stable compared to those of double or single hydrogen bonded structures. It is also noticed that up to four solvent H(2)O units can reside around the solute in interwater hydrogen bonding network. At the maximum six H(2)O units are independently linked to the dimer anion having four double hydrogen bonding and two single hydrogen bonding, suggesting the hydration number of I(2) (-) to be 6. However, conformers having H(2)O units independently linked to the iodine dimer anion are not the most stable structures. In all these hydrated clusters, the odd electron is found to be localized over two I atoms and the two atoms are bound by a three-electron hemi bond. The solvation, interaction, and vertical detachment energies are calculated for all I(2) (-).nH(2)O clusters. Energy of interaction and vertical detachment energy profiles show stepwise saturation, indicating geometrical shell closing in the hydrated clusters, but solvation energy profile fails to show such behavior. A linear correlation is observed between the calculated energy of interaction and vertical detachment energy. It is observed that formation of I(2) (-)-water cluster induces significant shifts from the normal O-H stretching modes of isolated H(2)O. However, bending mode of H(2)O remains insensitive to the successive addition of solvent H(2)O units. Weighted average energy profiles and IR spectra are reported for all the hydrated clusters based on the statistical population of individual conformers at room temperature.     

Vibronically resolved electronic circular dichroism spectra of (R)-(+)-3-methylcyclopentanone: a theoretical study

The vibrationally resolved electronic circular dichroism (ECD) spectra of the two dominant conformers of (R)-(+)-3-methylcyclopentanone in gas phase are computed by density functional response theory, with a full account of Franck-Condon and Herzberg-Teller vibrational contributions at the harmonic level. Proper inclusion of the latter contributions was made possible by the recent implementation of effective-scaling computations of vibrational overlaps and of analytical gradients of time dependent DFT. The Coulomb-attenuated Becke three parameters Lee-Yang-Parr (CAM-B3LYP) functional reproduces both the position and the intensity of the experimental peaks, providing a remarkable improvement over the spectra obtained with the popular hybrid B3LYP functional, and allowing a confident assignment of the CD fine vibrational structure. Franck-Condon and Herzberg-Teller contributions are discussed in detail. The computed decrease of the CD intensity in the gas phase upon increase of the temperature of the sample follows the trend observed experimentally in different solvents.     

Synthesis, IR spectra, crystal structure and DFT studies on 1-acetyl-3-(4-chlorophenyl)-5-(4-methylphenyl)-2-pyrazoline

1-Acetyl-3-(4-chlorophenyl)-5-(4-methylphenyl)-2-pyrazoline has been synthesized and characterized by elemental analysis, IR and X-ray single crystal diffraction. Density functional (DFT) calculations have been carried out for the title compound by using the B3LYP method at the 6-311G** basis set level. The calculated results show that the predicted geometry can reproduce well the structural parameters. Predicted vibrational frequencies have been assigned and compared with experimental IR spectra and they are supported each other. On the basis of vibrational analyses, the thermodynamic properties of the title compound at different temperatures have been calculated, revealing the correlations between C(0)(p, m), S(0)(m), H(0)(m) and temperatures.     

Microhydration shell structure in Cl2*-.nH2O clusters: A theoretical study

We present the results of a detailed study on structure and electronic properties of hydrated cluster Cl2*-.nH2O (n = 1-7) based on a nonlocal density functional, namely, Becke's [J. Chem. Phys. 98, 1372 (1993)] half and half hybrid exchange-correlation functional with a split valence 6-311++G(d,p) basis function. Geometry optimizations for all the clusters are carried out with various possible initial guess structures without any symmetry restriction. Several minimum energy structures (conformers) are predicted with a small difference in total energy. There is a competition between the binding of solvent H2O units with Cl2*- dimer radical anion directly through ion-molecule interaction and forming interwater hydrogen-bonding network in Cl2*-.nH2O (n > or = 2) hydrated cluster. Structure having interwater H-bonded network is more stable over the structure where H2O units are connected to the solute dimer radical anion Cl2*- rather independently either by single or double H bonding in a particular size (n) of hydrated cluster Cl2*-.nH2O. At the maximum four solvent H2O units reside in interwater H-bonding network present in these hydrated clusters. It is observed that up to six H2O units are independently linked to the anion having four double H bondings and two single H bondings suggesting the primary hydration number of Cl2*- to be 6. In all these clusters, the odd electron is found to be mostly localized over the two Cl atoms and these two atoms are bound by a three-electron hemibond. Calculated interaction (between solute and different water clusters) and vertical detachment energy profiles show saturation at n = 6 in the hydrated cluster Cl2*-.nH2O (n = 1-7). However, calculated solvation energy increases with the increase in number of solvent H2O molecules in the cluster. Interaction energy varies linearly with vertical detachment energy for the hydrated clusters Cl2*-.nH2O (n < or = 6). Calculation of the vibration frequencies show that the formation of Cl2*(-)-water clusters induces significant shifts from the normal stretching modes of isolated water. A clear difference in the pattern of IR spectra is observed in the O-H stretching region of water from hexa- to heptahydrated cluster.     

Infrared signatures of HNO3 and NO3(-) at a model aqueous surface. A theoretical study

The infrared signatures of nitric acid HNO3 and its conjugate anion NO3(-) at the surface of an aqueous layer are derived from electronic structure calculations at the HF/SBK+* level of theory on the HNO3 x (H2O)3 --> NO3(-) x H3O(+) x (H2O)2 model reaction system embedded in clusters comprising 33, 40, 45, and 50 classical, polarizable waters, mimicking various degrees of solvation [Bianco, R.; Wang, S.; Hynes, J. T. J. Phys. Chem. A 2007, 111, 11033]. The molecular level character of the various bands is discussed, and the solvation patterns are described in terms of hydrogen bonding and resulting polarization of the species' intramolecular bonds. Connection is made with assorted experimental results, including surface-sensitive Sum Frequency Generation spectroscopy of aqueous nitric acid solutions, infrared spectroscopy of amorphous thin films of nitric acid monohydrate (NAM) and dihydrate (NAD), and infrared and Raman spectroscopic results for bulk aqueous solutions of nitric acid and nitrate salts.     

Cationic germanium fluorides: a theoretical investigation on the structure, stability, and thermochemistry of GeFn/GeFn+ (n = 1-3)

The structure, harmonic frequencies, enthalpies of formation, and dissociation energies of the GeF(n)(+) cations (n = 1-3) and of their neutral counterparts GeF(n) have been investigated at the MP2 and CCSD(T) levels of theory and discussed in connection with previous experimental and theoretical data. The CCSD(T,full)/cc-pVTZ-optimized geometries and MP2(full)/6-311G(d) harmonic frequencies are 1.744 A and 668.0 cm(-1) for GeF((2)Pi), 1.670 A and 798.6 cm(-1) for GeF(+)((1)Sigma(+)), 1.731 A/97.4 degrees and 267.0 (a(1))/673.1 (b(2))/690.6 (a(1)) cm(-1) for GeF(2)(C(2)(v),(1)A(1)), 1.666 A/116.9 degrees and 202.3 (a(1))/769.6 (a(1))/834.6 (b(2)) cm(-1) for GeF(2)(+)(C(2)(v),(2)A(1)), 1.706 A/112.2 degrees and 214.4 (e)/273.1 (a(1))/699.6 (a(1))/734.1 (e) cm(-1) for GeF(3)(C(3)(v),(2)A(1)), and 1.644 A and 211.4 (e')/229.9 (a(2)' ')/757.4 (a(1)')/879.3 (e') cm(-1) for GeF(3)(+)(D(3)(h),(1)A(1)). These calculated values are in excellent agreement with the experimental data reported for GeF, GeF(+), and GeF(2), and should be therefore of good predictive value for the still unexplored GeF(2)(+), GeF(3), and GeF(3)(+). The comparison of the CCSD(T,full)/cc-pVTZ enthalpies of formation at 298.15 K, -11.6 (GeF), -125.9 (GeF(2)), -180.4 (GeF(3)), 158.4 (GeF(+)), 134.1 (GeF(2)(+)), and 44.8 (GeF(3)(+)) kcal mol(-1), with the available experimental data, especially for the cations, shows discrepancies which suggest the need for novel and more refined measurements. On the other hand, the computed adiabatic ionization potentials of GeF, 7.3 eV, GeF(2), 11.2 eV, and GeF(3), 9.7 eV, are in good agreement with the available experimental estimates.     

Microhydration of X2 gas (X = Cl, Br, and I): a theoretical study on X2.nH2O clusters (n = 1-8)

Structure and properties of hydrated clusters of halogen gas, X2.nH2O (X = Cl, Br, and I; n = 1-8) are presented following first principle based electronic structure theory, namely, BHHLYP density functional and second-order Moller-Plesset perturbation (MP2) methods. Several geometrical arrangements are considered as initial guess structures to look for the minimum energy equilibrium structures by applying the 6-311++G(d,p) set of the basis function. Results on X2-water clusters (X = Br and I) suggest that X2 exists as a charge separated ion pair, X+delta-X-delta in the hydrated clusters, X2.nH2O (n > or = 2). Though the optimized structures of Cl2.nH2O clusters look like X2.nH2O (X = Br and I) clusters, Cl2 does not exist as a charge separated ion pair in the presence of solvent water molecules. The calculated interaction energy between X2 and solvent water cluster increases from Cl2.nH2O to I2.nH2O clusters, suggesting solubility of gas-phase I2 in water to be a maximum among these three systems. Static and dynamic polarizabilities of hydrated X2 clusters, X2.nH2O, are calculated and observed to vary linearly with the size (n) of these water clusters with correlation coefficient >0.999. This suggests that the polarizability of the larger size hydrated clusters can be reliably predicted. Static and dynamic polarizabilities of these hydrated clusters grow exponentially with the frequency of an external applied field for a particular size (n) of hydrated cluster.     

Molecular structure and vibrational spectra of 2,6-bis(benzylidene)cyclohexanone: a density functional theoretical study

The near-infrared Fourier transform (NIR-FT) Raman and Fourier transform infrared (FT-IR) spectral analyses of 2,6-bis(benzylidene)cyclohexanone (BBC) molecule, a potential drugs for the treatment of P388 leukemia cells, were carried out along with density functional computations. The optimized geometry of BBC using density functional theory shows that the energetically favored chair conformation is not observed for central cyclohexanone ring and is found to possess a nearly ‘half chair’ conformation and shows less expansion of the angles and more rotation about the bonds. The existence of intramolecular C–H?O improper, blue-shifted hydrogen bond was investigated by means of the NBO analysis. The lowering of carbonyl stretching vibration can be attributed to the mesomeric effect and the π-orbital conjugation induced by the unsaturation in the α-carbon atoms and co-planarity of the (–CHC–(CO)–CCH–) group.     

An experimental and theoretical study of the molecular structure and vibrational spectra of iodotrimethylsilane (SiIMe3)

The gas-phase molecular structure of iodotrimethylsilane (ITMS) has been determined from electron diffraction data. Infrared and Raman spectra have been completely assigned. The experimental work is supported by ab initio HF and MP2 calculations for the gas-phase structure determination and DFT(B3LYP) calculations, combined with Pulay's SQM method, for the vibrational spectra data.     

Synthesis, structure, and theoretical study of the nonclassical [CuTe(7)](3-) anion

The compound [PPh(4)](2)[NEt(4)][CuTe(7)] has been synthesized from the reaction of CuCl with a polytelluride solution in dimethylformamide at room temperature. The compound crystallizes with two formula units in the triclinic space group P(-)1 in a cell with dimensions a = 8.9507(18) A, b = 14.714(3) A, and c = 23.277(5) A and alpha= 86.32(3) degrees, beta= 80.17(3) degrees, and gamma= 75.63(3) degrees (T = -120 degrees C). Ab initio calculations indicate that the nonclassical [CuTe(7)](3)(-) anion is the result of joining Te(3)(2-) and [CuTe(4)](1-) fragments through donor-acceptor interactions.     

IR spectra of CO and NO adsorbed on CuO

The original heterogeneity of CuO surface is suggested to account for the presence of two states of surface copper cations with different effective charges.

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CuO, . , .

     

Theoretical study of structure, stability and infrared spectra of CH3X-SO3 (X = F, Cl, Br) complexes

Ab initio computational study of the electronic structure and infrared spectra of donor-acceptor complexes formed between SO3 and CH3X (X = F, Cl, Br) molecules was carried out at the MP2(full)/6-31G(d) level of theory. The calculated complexation energy at G2MP2 level shows that stability of complexes decrease, as CH3Cl-SO3 > CH3Br-SO3 > CH3F-SO3. The NBO partitioning scheme show that the lengthening of the C-F, C-Cl, and C-Br bond lengths, upon complexation, is due to an decreasing "s" character in these bonds.     

Multiple hydrogen-bonding interactions between macrocyclic triurea and F-, Cl-, Br-, I- and NO3(-): a theoretical investigation

The binding behaviors of the 27-membered macrocyclic triurea 1 towards the five anions, F(-), Cl(-), Br(-), I(-) and NO(3)(-), through multiple hydrogen-bonding interactions, were investigated at the B3LYP/6-311++G(d,p)//B3LYP/6-31(1)++G(d,p) (6-31(1)++G(d,p) is a hybrid basis set; for more details see computational methods) level. Three binding modes (I, II, and III) were found for all the five anions in the gas phase, and seven structural parameters have been used to describe these binding modes. Binding mode I and II have similar binding geometries and their coordination number of anions is six. Binding mode III exhibits completely different binding characteristics and the coordination number is three except for NO(3)(-). Our calculation revealed that the binding strength of binding modes follows the trend, mode II > I > III, with the exception of F(-) complex. The binding affinity of anions in the gas phase goes in this order: F(-) > Cl(-) > NO(3)(-) > Br(-) > I(-). The changes in the binding affinity for all 15 urea-anion complexes under the influence of solvent environment were examined using the IEF-PCM continuum solvation model. Although the binding affinities are weakened substantially because of solvent effect, these drastic changes do not affect the affinity order in the gas phase. The experimentally observed affinity strength in chloroform, Cl(-) > NO(3)(-) > Br(-), was confirmed by this work. Moreover, we found a high correlation between ΔE(bind) (1) and ΔE(In) (1,3-dimethylurea) for all three binding modes, implying that the affinity strength of 1 to these five anions is determined mainly by the proton-accepting ability of anions, not by steric effect.     

IR spectra and structure of 2-aryl-3-hydroxypyridines

The IR spectra of methyl, chloro, and phenyl derivatives of 3-hydroxypyridines in CCl₄ solutions and in the crystalline state were studied. A comparison of the frequencies, half widths, and integral intensities of the bands of the stretching vibrations of the hydroxyl groups in the spectra of solutions of the 3-hydroxypyridine derivatives in CCl₄ with the characteristic OH bands in the spectra of phenols demonstrates that 3-hydroxypyridines exist practically completely in the hydroxy form in dilute CCl₄ solutions. The shift in the OH bands in the spectra of 2-phenyl-3-hydroxypyridine derivatives indicates that the OH group forms a -hydrogen bond with the phenyl ring. The presence also of a band of a free OH group is evidence for the existence of s-cis and s-trans conformers relative to the C-O bond.Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 2, pp. 187–190, February, 1972.     

IR spectra and structure of 2- imino-1,3-dimethylbenzimidazolines

The fine structure of some N-substituted 2-imino-1,3-dimethyl-benzimidazolines is examined with the aid of IR spectroscopy. It is shown that the introduction of an alkyl or phenyl group into the imino group does not affect the C=N group or the imidazoline ring structure. In salts of 2-imino-1,3-dimethylbenzimidazoline and its N-substituted derivatives, the heterocyclic system has the benzimidazolium structure. The structure of 2-imino-1,3-dimethylbenzimidazolines in which the exocyclic nitrogen atom has electrophilic substituents which are conjugated with the heterocycle is characterized by a considerable contribution from dipolar forms, with the imidazole ring bearing a positive charge.Translated from Khimiya Geterotskilicheskikh Soedinenii, Vol. 6, No. 5, pp. 674–678, May 1970.