ATOP dyes. optimization of a multifunctional merocyanine chromophore for high refractive index modulation in photorefractive materials.

This paper reports synthesis, characterization and structural optimization of amino-thienyl-dioxocyano-pyridine (ATOP) chromophores toward a multifunctional amorphous material with unprecedented photorefractive performance. The structural (dynamic NMR, XRD) and electronic (UV/vis, electrooptical absorption, Kerr effect measurements) characterization of the ATOP chromophore revealed a cyanine-type pi-conjugated system with an intense and narrow absorption band (epsilon(max) = 140 000 L mol(-)(1) cm(-)(1)), high polarizability anisotropy (deltaalpha(0) = 55 x 10(-)(40) C V(-)(1) m(2)), and a large dipole moment (13 D). This combination of molecular electronic properties is a prerequisite for strong electrooptical response in photorefractive materials with low glass-transition temperature (T(g)). Other important materials-related properties such as compatibility with the photoconducting poly(N-vinylcarbazole) (PVK) host matrix, low melting point, low T(g), and film-forming capabilities were optimized by variation of four different alkyl substituents attached to the ATOP core. A morphologically stable PVK-based composite containing 40 wt % of ATOP-3 showed an excellent photorefractive response characterized by a refractive index modulation of Deltan approximately 0.007 and a gain coefficient of Gamma approximately 180 cm(-)(1) at a moderate electrical field strength of E = 35 V microm(-)(1). Even larger effects were observed with thin amorphous films consisting of the pure glass-forming dye ATOP-4 (T(g) = 16 degrees C) and 1 wt % of the photosensitizer 2,4,7-trinitro-9-fluorenylidene-malononitrile (TNFM). This material showed complete internal diffraction at a field strength of only E = 10 V microm(-)(1) and Deltan reached 0.01 at only E = 22 V microm(-)(1) without addition of any specific photoconductor.     

Triphenylamine-based highly active two-photon absorbing chromophores with push-pull systems

Two triphenylamine-based star-type push-pull chromophores (T1, T2) were designed and synthesized. Triphenylamine serves as the central core and acts as an electron-donating group surrounded by electron-withdrawing pentafluorobenzene or N,N-dimethyl substituted tetrafluorobenzene, which are connected by ethylene bridges. Single-crystal X-ray diffraction confirmed the structures and molecular arrangement of two chromophores. The systematic photophysical research of T1 and T2 absorption characteristics was carried out to gain a better understanding of how structure-property relationships affect the observed nonlinear optical absorption phenomenon. Complementary calculations based on density functional theory (DFT) further confirmed the experimental results. Both chromophores exhibited excellent two-photon absorption (TPA) properties in CH₂Cl₂. Notably, T2 has more remarkable nonlinear optical absorption effects with the TPA cross-section up to 4.24 × 10⁷ GM. By adjusting the electronic structures of the chromophores through introducing pentafluorobenzene or N,N-dimethyl as functional groups with different electron-donating or withdrawing behaviors, the TPA performance of the small organic molecule could be greatly enhanced. These molecular structures with push-pull systems were excellent candidates for different two-photon applications.     

Electron crystallography and organic materials with non-linear optical properties

Results of electron microscopic studies of crystal structures of a number of bis-benzylidene cyclohexanones are presented. It is shown that some of these compounds are efficient crystalline non-linear optically active (NLO) chromophores with second harmonic generation (SHG) properties. Appropriately functionalized chromophores of this type can be used as a polycondensation comonomer to produce partly crystalline main-chain NLO-active polymers. Electron diffraction crystal structural data, obtained for very small crystals, allowed us to get reasonable estimations of macroscopic crystal NLO-coefficients, relating quantum-chemically calculated molecular first hyperpolarizability components to crystal axes.     

Effect of strong electron correlation on the efficiency of photosynthetic light harvesting

Research into the efficiency of photosynthetic light harvesting has focused on two factors: (1) entanglement of chromophores, and (2) environmental noise. While chromophores are conjugated π-bonding molecules with strongly correlated electrons, previous models have treated this correlation implicitly without a mathematical variable to gauge correlation-enhanced efficiency. Here we generalize the single-electron/exciton models to a multi-electron/exciton model that explicitly shows the effects of enhanced electron correlation within chromophores on the efficiency of energy transfer. The model provides more detailed insight into the interplay of electron correlation within chromophores and electron entanglement between chromophores. Exploiting this interplay is assisting in the design of new energy-efficient materials, which are just beginning to emerge.     

Diffusion kinetics investigations of Nano Ag-doped holographic polymer dispersed liquid crystal gratings

ABSTRACT

In this paper, we use multicomponent mutual diffusion method to derive a one-dimensional non-local diffusion dynamic model to describe the diffusion kinetics of a dynamic holographic polymer dispersed liquid crystal grating (H-PDLC) doped with nano-silver. The physical mechanism of diffusion between monomer and liquid crystal, monomer and nano-silver particles is analysed using this model. Using coupled-wave theory, the H-PDLC’s diffraction efficiency curve with the expose time are simulated due to the vivid changing of effective refractive index modulation caused by the movement of concentration of each component with the expose time. Correspondingly, in the experiment, the diffraction efficiency of the grating is measured in real time, which shows the improvement for the holographic properties because of nano-silver doped H-PDLC. The simulation results have a good agreement with experimental data by fitting the corresponding parameters of the model. In addition, through comparing with simulation and experimental results with doping different concentrations of nano-silver particles, the recipe and diffraction characteristics of H-PDLC grating can be improved. Thus, the diffusion Kinetics model can be used to optimise the phase separation of the PDLC grating, and finally to improve the opto-electrical properties of H-PDLC gratings.     

Spectroscopic structure-property relationships of a series of polyaromatic platinum acetylides

To develop a structure-spectroscopic property relationship in platinum acetylides having poly(aromatic hydrocarbon) ligands, we synthesized a series of chromophores with systematic variation in the number of fused aromatic rings (nFAR) and ligand topology (polyacene (L), polyphenanthrene (Z), or compact(C)). We measured ground-state absorption, fluorescence, and phosphorescence spectra. We also performed nanosecond and femtosecond transient absorption experiments. To extend the range of compounds in the structure-property relationship, we did DFT calculations on an expanded series of chromophores. Both the DFT results and experiments show that the S(1) and T(1) state energies are a function of both nFAR and the ligand topology. In the L chromophores, the S(1) and T(1) state energies decrease linearly with nFAR. In contrast, the S(1) and T(1) state energies of the Z chromophores oscillate around a fixed value with increasing nFAR. The C chromophores have behavior intermediate between the L and Z chromophores. A parallel series of calculations on the ligands shows the same behavior. The S(1)-S(n) energy obtained from ultrafast time-resolved spectra has a linear variation in nFAR. The rate constant for nonradiative decay, k(nr), was calculated from the S(1) state lifetime and decreases with an increasing number of π electrons in the aromatic ring. The result is consistent with the spin-orbit coupling caused by the central platinum heavy atom decreasing with larger nFAR. The present work shows that the framework developed for the analysis of poly(aromatic hydrocarbon) properties is useful for the understanding of the corresponding platinum acetylide complexes.     

Better biomolecule thermodynamics from kinetics

Protein stability is measured by denaturation: When solvent conditions are changed (e.g., temperature, denaturant concentration, or pH) the protein population switches between thermodynamic states. The resulting denaturation curves have baselines. If the baselines are steep, nonlinear, or incomplete, it becomes difficult to characterize protein denaturation. Baselines arise because the chromophore probing denaturation is sensitive to solvent conditions, or because the thermodynamic states evolve structurally when solvent conditions are changed, or because the barriers are very low (downhill folding). Kinetics can largely eliminate such baselines: Relaxation of chromophores, or within thermodynamic states, is much faster than the transition over activation barriers separating states. This separation of time scales disentangles population switching between states (desired signal) from chromophore or population relaxation within states (baselines). We derive simple formulas to extract unfolding thermodynamics from kinetics. The formulas are tested with model data and with a difficult experimental test case: the apparent two-state folder PI3K SH3 domain. Its melting temperature T(m) can be extracted reliably by our "thermodynamics from kinetics approach," even when conventional fitting is unreliable.     

Optical grating recording in highly organized thin films of Disperse Red 1

Optical grating recording with submicrometer spatial resolution, which can handle grey-level patterns, has been investigated in photochromic material made of Disperse Red 1 (DR1) molecules vacuum-deposited on a glass substrate. Holographic gratings of periods Λ within the range of 0.6 μm - 12 μm were recorded by 514.5 nm light from cw Ar⁺ laser using a degenerate two-wave mixing technique. Despite the very small DR1 layer thickness (∼ 0.1 μm), the diffraction efficiency measured in a Raman-Nath scattering regime reached 2 %. The obtained amplitude gratings were analysed with an optical microscope and Fourier transforms. Grating profiles were analysed in relation to exposure conditions and in correlation with molecular organisation. Polarising microscopy studies revealed the presence of light-induced optical anisotropy. Following that, we have checked the possibility of polarisation-sensitive recording in this medium.     

Properties of polyethylene glycol supported tetraarylporphyrin in aqueous solution and its interaction with liposomal membranes

5,10,15,20-Tetrakis(4-hydroxyphenyl)porphyrin was functionalized by covalent attachment of poly(ethylene glycol) (PEG) chains of various molecular weights, 350, 2000, and 5000 Da. The properties of PEG-functionalized tetraarylporphyrins in aqueous solution and their interactions with liposomes have been studied. Electronic absorption spectroscopy, dynamic light scattering, atomic force microscopy, and fluorescence quenching were used to monitor aggregation of porphyrin chromophores and behavior of the attached PEG chains in the aqueous solution. The tendency for aggregation of porphyrin chromophores in aqueous solution and the efficiency of fluorescence quenching by KI decrease with increasing length of PEG chain linked to the porphyrin ring. The experimental results indicate that polymer clusters are present in aqueous solution of all pegylated porphyrins. The interactions between the pegylated porphyrins and phosphatidylcholine liposomes in the aqueous solution were studied using the fluorescence methods. The apparent binding constants of porphyrin chromophores to liposomes were determined. The degree of binding was found to be dependent on the molecular weight of the attached polymer.     

Ethoxy‐substituted Oligo‐phenylenevinylene‐Bridged Organic Dyes for Efficient Dye‐Sensitized Solar Cells

Organic dyes with ethoxy‐substituted oligo‐phenylenevinylene as chromophores were synthesized for dye‐sensitized solar cells (DSSCs), and the detailed relationships between the dye structures, photophysical properties, electrochemical properties, and performances of DSSCs were described. The dye S3O showed broad IPCE spectra in the spectral range of 350–750 nm, and the dye S1P showed solar energy‐to‐electricity conversion efficiency (() of up to 4.23% under AM 1.5 irradiation (100 mW/cm²) in comparison with the reference Ru‐complex (N719 dye) with an η value of 5.90% under similar experimental conditions.     

Orientation control of fluorescence resonance energy transfer using DNA as a helical scaffold

The efficiency of fluorescence resonance energy transfer (FRET) between two chromophores positioned at opposite ends of DNA base pair domains has been investigated. The base pair domain serves as a helical scaffold which defines both the distance between chromophores and the dihedral angle between their electronic transition dipole moments, each incremental base pair increasing the distance and stepping the dihedral angle. Fluorescence quantum yields and lifetimes have been determined for both the donor and acceptor chromophores. The experimental data are found to be in excellent accord with an oriented dipole model, rather than with the averaged dipole model conventionally assumed for FRET.     

Gel sculpture: moldable, load-bearing and self-healing non-polymeric supramolecular gel derived from a simple organic salt

An easy access to a library of simple organic salts derived from tert-butoxycarbonyl (Boc)-protected L-amino acids and two secondary amines (dicyclohexyl- and dibenzyl amine) are synthesized following a supramolecular synthon rationale to generate a new series of low molecular weight gelators (LMWGs). Out of the 12 salts that we prepared, the nitrobenzene gel of dicyclohexylammonium Boc-glycinate (GLY.1) displayed remarkable load-bearing, moldable and self-healing properties. These remarkable properties displayed by GLY.1 and the inability to display such properties by its dibenzylammonium counterpart (GLY.2) were explained using microscopic and rheological data. Single crystal structures of eight salts displayed the presence of a 1D hydrogen-bonded network (HBN) that is believed to be important in gelation. Powder X-ray diffraction in combination with the single crystal X-ray structure of GLY.1 clearly established the presence of a 1D hydrogen-bonded network in the xerogel of the nitrobenzene gel of GLY.1. The fact that such remarkable properties arising from an easily accessible (salt formation) small molecule are due to supramolecular (non-covalent) interactions is quite intriguing and such easily synthesizable materials may be useful in stress-bearing and other applications.     

Comparison between protein-polyethylene glycol (PEG) interactions and the effect of PEG on protein-protein interactions using the liquid-liquid phase transition

Phase transitions of protein aqueous solutions are important for protein crystallization and biomaterials science in general. One source of thermodynamic complexity in protein solutions and their phase transitions is the required presence of additives such as polyethylene glycol (PEG). To investigate the effects of PEG on the thermodynamic behavior of protein solutions, we report measurements on the liquid-liquid phase separation (LLPS) of aqueous bovine serum albumin (BSA) in the presence of relatively small amounts of PEG with an average molecular weight of 1450 g/mol (PEG1450) as a model system. We experimentally characterize two thermodynamically independent properties of the phase boundary: (1) the effect of PEG1450 concentration on the LLPS temperature, (2) BSA/PEG1450 partitioning in the two liquid coexisting phases. We then use a thermodynamic perturbation theory to relate the first property to the effect of PEG concentration on protein-protein interactions and the second property to protein-PEG interactions. As criteria to determine the accuracy of a microscopic model, we examine the model's ability to describe both experimental thermodynamic properties. We believe that the parallel examination of these two properties is a valuable tool for verifying the validity of existing models and for developing more accurate ones. For our system, we have found that a depletion-interaction model satisfactorily explains both protein-PEG interactions and the effect of PEG concentration on protein-protein interactions. Finally, due to the general importance of LLPS, we will experimentally show that protein-PEG-buffer mixtures can exhibit two distinct types of liquid-liquid phase transitions.     

Effect of sensitizer protonation on singlet oxygen production in aqueous and nonaqueous media

The yield of singlet molecular oxygen, O2(a(1)Delta(g)), produced in a photosensitized process can be very susceptible to environmental perturbations. In the present study, protonation of photosensitizers whose chromophores contain amine functional groups is shown to adversely affect the singlet oxygen yield. Specifically, for bis(amino) phenylene vinylenes dissolved both in water and in toluene, addition of a protic acid to the solution alters properties of the system that, in turn, result in a decrease in the efficiency of singlet oxygen production. In light of previous studies on other molecules where protonation-dependent changes in the yield of photosensitized singlet oxygen production have been ascribed to changes in the quantum yield of the sensitizer triplet state, Phi(T), and to possible changes in the triplet state energy, E(T), our results demonstrate that this photosystem can respond to protonation in other ways. Although protonation-dependent changes in the amount of charge-transfer character in the sensitizer-oxygen complex may influence the singlet oxygen yield, it is likely that other processes also play a role. These include (a) protonation-dependent changes in sensitizer aggregation and (b) nonradiative channels for sensitizer deactivation that are enhanced as a consequence of the reversible protonation/deprotonation of the chromophore. The data obtained, although complicated, are relevant for understanding and ultimately controlling the behavior of photosensitizers in systems with microheterogeneous domains that have appreciable pH gradients. These data are particularly important given the use of such bi-basic chromophores as two-photon singlet oxygen sensitizers, with applications in spatially resolved singlet oxygen experiments (e.g., imaging experiments).     

A tridentate CNO‐donor palladium(II) complex as efficient catalyst for direct C―H arylation: Application in preparation of imidazole‐based push–pull chromophores

A series of imidazolium chlorides for the formation of tridentate CNO‐donor palladium(II) complexes featuring N‐heterocyclic carbene moieties have been developed from cheap and readily available starting materials with high yields. Their palladium complexes were prepared by reactions between the ligand precursors and PdCl₂ using K₂CO₃ as base in pyridine with reasonable yields. These air‐stable metal complexes were characterized using ¹H NMR and ¹³C{¹H} NMR spectroscopy and elemental analyses. Heteronuclear multiple bond correlation experiments were performed to identify key NMR signals of these compounds. The structures of two of the complexes were also established by single‐crystal X‐ray diffraction analysis. One of these complexes was successfully applied in the direct C―H functionalization reactions between heterocyclic compounds and aryl bromides, producing excellent yields of coupled products. The coupling reactions were scalable, allowing grams of coupled products to be obtained with a mere 2 mol% of Pd loading. The catalyst system developed allowed the large‐scale preparation of several push–pull chromophores straightforwardly. Photophysical properties based on UV–visible and fluorescence spectroscopy for these chromophores were investigated. Deep blue photoluminescence with moderate quantum efficiency and twisted intramolecular charge transfer excited state were observed for these chromophores. Density functional theory (DFT) and time‐dependent DFT calculations were performed to support the experimental results.     

Periodic and high-temperature disordered conformations of polytetrafluoroethylene chains: an ab initio modeling

We report here the main results of a successful attempt to predict some macroscopic properties of representative polymers of technological relevance both in regular and disordered forms by using first principle quantum mechanical approaches at microscopic level. Until now, the prediction of the structural and thermal properties of those polymers has been mostly a domain of molecular mechanics methods. To overcome the limits of those classical computational tools whenever physical properties are significantly influenced by stereoelectronic effects (e.g., electron rich substituents), we employed methods rooted in the Density Functional Theory (DFT). A general computational strategy including the proper choice of periodic boundary conditions (PBC), functional, basis set, and model system size, has been tested and validated for saturated polymers such as polyethylene and isotactic/syndiotactic polypropylenes. On the basis of these results, a comprehensive study of poly(tetrafluoroethylene) (PTFE) chains in both regular periodic and disordered conformations has been performed. A statistical approach has been next applied to obtain the thermal concentration of defects and to reproduce the thermal behavior of the investigated polymer. At the end, a very good agreement with experimental X-ray diffraction and IR results has been achieved, definitely reaching a good understanding of the widely studied disorder phenomenon determining the main technological properties of poly(tetrafluoroethylene) (the trade Teflon) and, at the same time, identifying the proper computational tools to investigate perfluoro-compounds and other complex polymeric systems.     

Determination of the space-charge field amplitude in polymeric photorefractive polymers

The space-charge field built in a polymeric photorefractive polymer was calculated by a simple method based on the oriented gas model. When anisotropic chromophores in a photorefractive polymer were exposed to an external field, they oriented preferentially to exhibit a birefringence. Then, under illumination of two coherent beams and an external field, they reoriented to form a photorefractive grating. During the formation of the grating, the chromophores were reoriented by the space-charge field as well as by the external applied field. The birefringence induced in the material by an external electric field was determined by measuring the transmittance of the sample which is placed between crossed polarizers, where birefringence depicts the orientation of the chromophores. By measuring the diffraction efficiency with a modified degenerate four-wave mixing setup, the index amplitude of the grating was determined. Finally, the space-charge field was determined by comparing the diffraction efficiency with the birefringence with respect to the applied electric field. In our study, the space-charge field was about 20% of the external applied field, which coincided with previous results obtained from our laboratory.     

A semiempirical approach to the intra-phycocyanin and inter-phycocyanin fluorescence resonance energy-transfer pathways in phycobilisomes

A semiempirical methodology to model the intra-phycocyanin and inter-phycocyanin fluorescence resonance energy-transfer (FRET) pathways in the rods of the phycobilisomes (PBSs) from Fremyella diplosiphon is presented. Using the F?rster formulation of FRET and combining experimental data and PM3 calculation of the dipole moments of the aromatic portions of the chromophores, transfer constants between pairs of chromophores in the phycocyanin (PC) structure were obtained. Protein docking of two PC hexamers was used to predict the optimal distance and axial rotation angle for the staked PCs in the PBSs' rods. Using the distance obtained by the docking process, transfer constants between pairs of chromophores belonging to different PC hexamers were calculated as a function of the angle of rotation. We show that six preferential FRET pathways within the PC hexameric ring and 15 pathways between hexamers exist, with transfer constants consistent with experimental results. Protein docking predicted the quaternary structure for PCs in rods with inter-phycocyanin distance of 55.6 A and rotation angle of 20.5 degrees . The inter-phycocyanin FRET constant between chromophores at positions beta(155) is maximized at the rotation angle predicted by docking revealing the crucial role of this specific inter-phycocyanin channel in defining the complete set of FRET pathways in the system.     

Microscopic probing of the size dependence in hydrophobic solvation

We report small angle x-ray scattering data demonstrating the direct experimental microscopic observation of the small-to-large crossover behavior of hydrophobic effects in hydrophobic solvation. By increasing the side chain length of amphiphilic tetraalkyl-ammonium (C(n)H(2n+1))(4)N(+) (R(4)N(+)) cations in aqueous solution we observe diffraction peaks indicating association between cations at a solute size between 4.4 and 5 A?, which show temperature dependence dominated by hydrophobic attraction. Using O K-edge x-ray absorption we show that small solutes affect hydrogen bonding in water similar to a temperature decrease, while large solutes affect water similar to a temperature increase. Molecular dynamics simulations support, and provide further insight into, the origin of the experimental observations.     

Verbenone-based push–pull chromophores with giant first hyperpolarizabilities: A new structure–property correlation study

Novel chromophores Ch1–8 based verbenone bridge with various strong donors and acceptors were designed for applications in nonlinear optics, and the nonlinear optical (NLO) properties of those verbenone-type chromophores were systematically investigated using the bond length alteration (BLA) theory, two states model (TSM) and sum-over-states (SOS) model. The results show that several verbenone-based chromophores possess remarkably large molecular second-order hyperpolarizabilities, which is due to its electron distribution close to the cyanine limit, the appropriate strength of acceptor, rather large change in dipole moment and low excitation energy. Computed hyperpolarizability (β_tot) of Ch6 also approach an outstanding 2922 × 10⁻³⁰ esu in TFE. The hyperpolarizability density analyses and two states model (TSM) were carried out to make a further insight into the origination of molecular nonlinearity of this unique system, suggesting that tuning structure of acceptor and polarity of the medium have great influence on the second-order nonlinear optical properties. More importantly, chromophores Ch1–Ch8 exhibited distinct features in two-dimensional second order NLO responses, and the strong electro-optical Pockels effect and optical rectification responses. The excellent electronic sum frequency generations (SFG) and difference frequency generations (DFG) effect are observed in these verbenone-type chromophores. These chromophores have a possibility to be appealing second-order nonlinear optical (NLO) materials, data storage materials and DSSCs materials from the standpoint of large β values, high LHE, and excellent two-dimensional second order NLO responses.