Conformation-specific Raman bands and electronic conjugation in substituted thioanisoles

Nonresonant Raman spectra and conformational stability are studied for thioanisole (TA) and substituted analogues [4-XTA, X = NO(2) (1), CN (2), H (3), CH(3) (4), and NH(2) (5)] at the 4-position. The ring-substituent (SCH(3)) vibrational modes of out-of-plane bending and torsional types are calculated to have strong Raman scattering activities only for the vertical conformers. Agreement between observed and calculated Raman spectra is analyzed numerically. The conformational stability of the SCH(3) rotation changes systematically to the electron-withdrawing character of the substituents. The rotational barrier is calculated satisfactorily by B3LYP/6-31++G(d,p) calculations, whereas the second- to fourth-order M?ller-Presset perturbation theory and coupled-cluster with single- and double-excitation calculations tend to overestimate conformational energy barriers with respect to coplanar forms. The coplanar form is obtained for 1 and 2, whereas the vertical conformer is favorable for 4 and 5. The origin of the conformational energy difference, DeltaE, is demonstrated on the basis of canonical molecular orbitals and natural bond orbitals (NBOs) of the ground state. The natural bond orbital interaction between a nonbonding n(S) orbital of the S atom and a pi orbital of the benzene ring is shown to stabilize the coplanar form predominantly. A linear relationship is obtained between the energy of the highest occupied molecular orbitals and DeltaE. The n(S)-pi interaction energy, E(2), based on the NBO representation and the Hammet constants also change linearly with respect to DeltaE.     

Structural and conformational properties and intramolecular hydrogen bonding of (methylenecyclopropyl)methanol, as studied by microwave spectroscopy and quantum chemical calculations

The microwave spectra of (methylenecyclopropyl)methanol (H(2)C=C(3)H(3)CH(2)OH) and one deuterated species (H(2)C=C(3)H(3)CH(2)OD) have been investigated in the 20-80 GHz spectral range. Accurate spectral measurements have been performed in the 40-80 GHz spectral interval. The spectra of two rotameric forms, denoted conformer I and conformer IX, have been assigned. Both these rotamers are stabilized by intramolecular hydrogen bonds formed between the hydrogen atom of the hydroxyl group and the pseudo-pi electrons on the outside of the cyclopropyl ring, the so-called "banana bonds". The carbon-carbon bond lengths in the ring are rather different. The bonds adjacent to the methylene group (H(2)C=) are approximately 7 pm shorter that the carbon-carbon bond opposite to this group. It is found from relative intensity measurements of microwave transitions that conformer IX, in which the hydrogen bond is formed with the banana bonds of the long carbon-carbon bond, is 0.4(3) kJ/mol more stable than conformer I, where the hydrogen bond is formed with the pseudo-pi electrons belonging to the shortest carbon-carbon bond of the ring. The microwave study has been augmented by quantum chemical calculations at the MP2/6-311++G, G3 and B3LYP/6-311++G levels of theory.     

5‐Amino‐4‐(4‐diethyl­amino­phenyl)‐2‐(4‐hydroxy­phenyl)‐7‐(pyrrolidin‐1‐yl)‐1,6‐naphthyridine‐8‐carbo­nitrile

In the title compound, C₂₉H₃₀N₆O, the naphthyridine moiety is planar with a dihedral angle between the fused rings of 1.9 (1)°. The phenol ring is nearly coplanar, while the diethyl­amino­phenyl substituent is orthogonal to the central naphthyridine ring and the pyrrolidine ring makes an angle of 11.2 (1)° with it. The O atom of the hydroxy substituent is coplanar with the phenyl ring to which it is attached. The molecular structure is stabilized by a C—H?N‐type intramolecular hydrogen bond and the packing is stabilized by intermolecular C—H?π, O—H?N and N—H?O hydrogen bonds.     

Pentacoordinate 1H-phosphirenes: reactivity, bonding properties, and substituent effects on their structures and thermal stability

The synthesis, reactivity, and bonding properties of several pentacoordinate P-phenyl-substituted 1H-phosphirenes are discussed. X-ray crystallographic analysis of one of them reveals a highly distorted square pyramidal (SP) arrangement around the phosphorus. NMR studies confirm that they retain the SP structure in solution and demonstrate that the endocyclic P-C bonds in the three-membered ring have a very high degree of p character, which results from their being both basal bonds in the SP structure and endocyclic bonds of the three-membered ring. Structural parameters of the three-membered ring of the pentacoordinate phosphirenes obtained by experiment and theoretical calculations are very close to those of a tetracoordinate phosphirenium cation. Thus, by analogy with tetracoordinate phosphirenium cations, it can be considered that a sigma-pi interaction between the sigma orbital of the apical bond and the pi orbital of the C=C bond in the three-membered ring is operative in pentacoordinate phosphirenes. The sigma-pi interaction is found to lower the reactivity of the C=C bond of the three-membered ring. The reactivities of the pentacoordinate phosphirenes are also affected by the substituent on the carbon atom in the three-membered ring.     

Conformational analysis of some 11, 12-dihydrodibenz[B,F][1, 5]oxazocin-6-one derivatives by NMR spectroscopy

A variable temperature 200 MHz ¹H NMR investigation of some N-acylsubstituted 11, 12-dihydrodibenz[b, f][1, 5]oxazocin-6-ones showed the presence at room temperature of at least two conformationally restricted diastereomers (and their enantiomers) which molecular mechanics calculations strongly suggested to be a boat-like structure (major conformer) and a pseudo-chair and/or twistboat-like structure (minor conformer). The diastereomersinterconvert through a bond rotation mechanism just above room temperature (51-54°C, depending upon the nature of the N-acyl substituent), and the boat enantiomers interconvert at higher temperatures (75-95°C, depending upon the nature of the N-acyl substituent and the substitution pattern of the aromatic rings) via a ring inversion process. The N-acyl groups exocyclic to the eight-membered ring are shown to wholly exist - probably as a result of severe dipole: dipole interactions - in the sterically disfavoured conformation where the alkyl substituent bonded to the exocyclic carbonyl carbon atom is trans to the benzylic methylene group. Corresponding N-unsubstituted derivatives exhibit rapid ring inversion on the NMR time scale at room temperature.     

Vibrational assignments, normal coordinate analysis, B3LYP calculations and conformational analysis of methyl-5-amino-4-cyano-3-(methylthio)-1H-pyrazole-1-carbodithioate

The Raman and infrared spectra of solid methyl-5-amino-4-cyano-3-(methylthio)-1H-pyrazole-1-carbodithioate (MAMPC, C7H8N4S3) were measured in the spectral range of 3700-100 cm(-1) and 4000-200 cm(-1) with a resolution of 4 and 0.5 cm(-1), respectively. Room temperature 13C NMR and (1)H NMR spectra from room temperature down to -60 °C were also recorded. As a result of internal rotation around C-N and/or C-S bonds, eighteen rotational isomers are suggested for the MAMPC molecule (Cs symmetry). DFT/B3LYP and MP2 calculations were carried out up to 6-311++G(d,p) basis sets to include polarization and diffusion functions. The results favor conformer 1 in the solid (experimentally) and gaseous (theoretically) phases. For conformer 1, the two -CH3 groups are directed towards the nitrogen atoms (pyrazole ring) and CS, while the -NH2 group retains sp2 hybridization and C-CN bond is quasi linear. To support NMR spectral assignments, chemical shifts (δ) were predicted at the B3LYP/6-311+G(2d,p) level using the method of Gauge-Invariant Atomic Orbital (GIAO) method. Moreover, the solvent effect was included via the Polarizable Continuum Model (PCM). Additionally, both infrared and Raman spectra were predicted using B3LYP/6-31G(d) calculations. The recorded vibrational, 1H and 13C NMR spectral data favors conformer 1 in both the solid phase and in solution. Aided by normal coordinate analysis and potential energy distributions, confident vibrational assignments for observed bands have been proposed. Moreover, the CH3 barriers to internal rotations were investigated. The results are discussed herein are compared with similar molecules whenever appropriate.     

Theoretical studies on conformational preferences of modified nucleic acid base N6-(N-glycylcarbonyl) adenine

Conformational preferences of modified nucleic acid base N⁶-(N-glycylcarbonyl) adenine, gc⁶Ade, have been investigated using the quantum chemical PCILO (Perturbative configuration interaction using localized orbitals) method. The multidimensional conformational space has been searched using selected grid points formed by combining various torsion angles that take favored values derived from energy variation with respect to each torsion angle individually. The theoretically predicted most stable, minimum energy conformation of the molecule is such that the substituent on N(6) spreads away from the imidazole moiety of the adenine ring, thus keeping distal orientation. The preferred molecular orientation is stabilized by an intramolecular hydrogen bond from N(11)H of the amino acid to N(1) of the adenine. The carboxylic group of the substituent is trurned away in relation to N(11)H…?N(1) and is perpendicular to the plane through the rest of the molecule The alternative stable conformation corresponding to an 0.8 kcal/mol higher energy has a coplanar carboxylic group turned towards the same side as N(11)H…?N(1) and is exhibited in the crystal structure of the nucleoside derivative, gc⁶A. Energetically, the carboxyl group may change its orientation over a wide range, without much destabilization. This suggests probing by the carboxyl group of the molecular environment in the vicinity of the anticodon in tRNA.     

Molecular structure of phenylsilane: a study by gas-phase electron diffraction and ab initio molecular orbital calculations

The molecular structure of phenylsilane has been determined accurately by gas-phase electron diffraction and ab initio MO calculations at the MP2(f.c.)/6-31G* level. The calculations indicate that the perpendicular conformation of the molecule, with a Si–H bond in a plane orthogonal to the plane of the benzene ring, is the potential energy minimum. The coplanar conformation, with a Si–H bond in the plane of the ring, corresponds to a rotational transition state. However, the difference in energy is very small, 0.13 kJ mol⁻¹, implying free rotation of the substituent at the temperature of the electron diffraction experiment (301 K). Important bond lengths from electron diffraction are: <r_g(C–C)>=1.403±0.003 Å, r_g(Si–C)=1.870±0.004 Å, and r_g(Si–H)=1.497±0.007 Å. The calculations indicate that the C_ipso–C_ortho bonds are 0.010 Å longer than the other C–C bonds. The internal ring angle at the ipso position is 118.1±0.2° from electron diffraction and 118.0° from calculations. This confirms the more than 40-year old suggestion of a possible angular deformation of the ring in phenylsilane, in an early electron diffraction study by F.A. Keidel, S.H. Bauer, J. Chem. Phys. 25 (1956) 1218.     

2′‐Deoxy‐5‐propynyluridine: a nucleoside with two conformations in the asymmetric unit

The title compound, 1‐(2‐deoxy‐β‐d ‐erythro‐pentofuranosyl)‐5‐(prop‐1‐ynyl)pyrimidin‐2,4(1H,3H)‐dione, C₁₂H₁₄N₂O₅, shows two conformations in the crystalline state: conformer 1 adopts a C2′‐endo (close to ²E; S‐type) sugar pucker and an anti nucleobase orientation [χ = −134.04 (19)°], while conformer 2 shows an S sugar pucker (twisted C2′‐endo–C3′‐exo), which is accompanied by a different anti base orientation [χ = −162.79 (17)°]. Both molecules show a +sc (gauche, gauche) conformation at the exocyclic C4′—C5′ bond and a coplanar orientation of the propynyl group with respect to the pyrimidine ring. The extended structure is a three‐dimensional hydrogen‐bond network involving intermolecular N—H...O and O—H...O hydrogen bonds. Only O atoms function as H‐atom acceptor sites.     

Spectra and structure of silicon containing compounds. XXXII. Raman and infrared spectra,conformational stability,vibrational assignment and ab initio calculations of n-propylsilane-d0 and Si-d3

The infrared (3100-40 cm(-1)) and Raman (3100-20 cm(-1)) spectra of gaseous and solid n-propylsilane, CH(3)CH(2)CH(2)SiH(3) and the Si-d(3) isotopomer, CH(3)CH(2)CH(2)SiD(3), have been recorded. Additionally, the Raman spectra of the liquids have been recorded and qualitative depolarization values obtained. Both the anti and gauche conformers have been identified in the fluid phases but only the anti conformer remains in the solid. Variable temperature (-105 to -150 degrees C) studies of the infrared spectra of n-propylsilane dissolved in liquid krypton have been recorded and the enthalpy difference has been determined to be 220+/-22 cm(-1) (2.63+/-0.26 kJ mol(-1)) with the anti conformer the more stable form. A similar value of 234+/-23 cm(-1) (2.80+/-0.28 kJ mol(-1)) was obtained for deltaH for the Si-d(3) isotopomer. At ambient temperature it is estimated that there is 30+/-2% of the gauche conformer present. The potential function governing the conformation interchange has been estimated from the far infrared spectral data, the enthalpy difference, and the dihedral angle of the gauche conformer, which is compared to the one predicted from ab initio MP2/6-31G(d) calculations. The barriers to conformational interchange are: 942, 970 and 716 cm(-1) for the anti to gauche, gauche to gauche, and gauche to anti conformers, respectively. Relatively complete vibrational assignments are proposed for both the n-propylsilane-d(0) and Si-d(3) molecules based on the relative infrared and Raman spectral intensities, infrared band contours, depolarization ratios, and normal coordinate calculations. The geometrical parameters, harmonic force constants, vibrational frequencies, infrared intensities, Raman activities and depolarization ratios, and energy differences have been obtained for the anti and gauche conformers from ab initio MP2/6-31G(d) calculations. Structural parameters and energy differences have also been obtained utilizing the larger 6-311 + G(d,p) and 6-311 + G(2d,2p) basis sets. From the isolated Si-H stretching frequency from the Si-d(2) isotopomer the r(0) distances of 1.484 and 1.485 A have been determined for the SiH(s) and SiH(a) bonds, respectively, for the anti conformer, and 1.486 A for the SiH bond for the gauche conformer. Utilizing previously reported microwave rotational constants for the anti conformer and the determined SiH distances along with ab initio predicted parameters 'adjusted r(0)' parameters have been obtained for the anti conformer. The results are discussed and compared to those obtained for some similar molecules.     

2-Deoxy-beta-D-erythro-pentofuranose: hydroxymethyl group conformation and substituent effects on molecular structure, ring geometry, and NMR spin-spin coupling constants from quantum chemical calculations.

The effect of hydroxymethyl conformation (gg, gt, and tg rotamers about the C4-C5 bond) on the conformational energies and structural parameters (bond lengths, bond angles, bond torsions) of the 10 envelope forms of the biologically relevant aldopentofuranose, 2-deoxy-beta-D-erythro-pentofuranose (2-deoxy-D-ribofuranose) 2, has been investigated by ab initio molecular orbital calculations at the HF/6-31G level of theory. C4-C5 bond rotation induces significant changes in the conformational energy profile of 2 (2gt and 2tg exhibit one global energy minimum, whereas 2gg exhibits two nearly equivalent energy minima), and structural changes, especially those in bond lengths, are consistent with predictions based on previously reported vicinal, 1,3- and 1,4-oxygen lone pair effects. HF/6-31G-optimized envelope geometries of 2gg were re-optimized using density functional theory (DFT, B3LYP/6-31G), and the resulting structures were used in DFT calculations of NMR spin-spin coupling constants involving 13C (i.e., J(CH) and J(CC) over one, two, and three bonds) in 2gg according to methods described previously. The computed J-couplings were compared to those reported previously in 2gt to assess the effect of C4-C5 bond rotation on scalar couplings within the furanose ring and hydroxymethyl side chain. The results confirm prior predictions of correlations between 2J(CH), 3J(CH), 2J(CC) and 3J(CC), and ring conformation, and verify the usefulness of a concerted application of these couplings (both their magnitudes and signs) in assigning preferred ring and C4-C5 bond conformations in aldopentofuranosyl rings. The new calculated J-couplings in 2gg have particular relevance to related J-couplings in DNA (and RNA indirectly), where the gg rotamer, rather than the gt rotamer, is observed in most native structures. The effects of two additional structural perturbations on 2 were also studied, namely, deoxygenation at C5 (yielding 2,5-dideoxy-beta-D-erythro-pentofuranose 4) and methyl glycosidation at O1 (yielding methyl 2-deoxy-beta-D-erythro-pentofuranoside 5) at the HF/6-31G level. The conformational energy profile of 4 resembles that found for 2gt, not 2gg, indicating that 4 is an inappropriate structural mimic of the furanose ring in DNA. Glycosidation failed to induce differential stabilization of ring conformations containing an axial C1-O1 bond (anomeric effect), contrary to experimental data. The latter discrepancy indicates that either the magnitude of this differential stabilization depends on ring configuration or that solvent effects, which are neglected in these calculations, play a role in promoting this stabilization.     

Do single-electron lithium bonds exist? Prediction and characterization of the H3C...Li-Y (Y=H, F, OH, CN, NC, and CCH) complexes

A new kind of single-electron lithium bonding complexes H(3)C...LiY (Y=H, F, OH, CN, NC, and CCH) was predicted and characterized in the present paper. Their geometries (C(3v)) with all real harmonic vibrational frequencies were obtained at the MP2/aug-cc-pVTZ level. For each H(3)C...LiY complex, single-electron Li bond is formed between the unpaired electron of CH(3) radical and positively charged Li atom of LiY molecule. Due to the formation of the single-electron Li bond, the C-H bonds of the CH(3) radical bend opposite to the LiY molecule and the Li-Y bond elongates. Abnormally, the three H(3)C...LiY (Y=CN, NC, and CCH) complexes exhibit blueshifted Li-Y stretching frequencies along with the elongated Li-Y bonds. Natural bond orbital analyses suggest ca. 0.02 electron transfer from the methyl radical (CH(3)) to the LiY moiety. In the single occupied molecular orbitals of the H(3)C...LiY complexes, it is also seen that the electron could of the CH(3) radical approaches the Li atom. The single-electron Li bond energies are 5.20-6.94 kcal/mol for the H(3)C...LiY complexes at the CCSD(T)aug-cc-pVDZ+BF (bond functions) level with counterpoise procedure. By comparisons with some related systems, it is concluded that the single-electron Li bonds are stronger than single-electron H bonds, and weaker than conventional Li bonds and pi-Li bonds.     

Polar effects and structural variation in 4-substituted 1-phenylbicyclo[2.2.2]octane derivatives: a quantum chemical study

The transmission of polar effects through the bicyclo[2.2.2]octane framework has been investigated by ascertaining how the geometry of a phenyl group at a bridgehead position is affected by a variable substituent at the opposite bridgehead position. We have determined the molecular structure of several Ph-C(CH(2)-CH(2))(3)C-X molecules (where X is a charged or dipolar substituent) from HF/6-31G and B3LYP/6-311++G molecular orbital calculations and have progressively replaced each of the three -CH(2)-CH(2)- bridges by a pair of hydrogen atoms. Thus the bicyclo[2.2.2]octane derivatives were changed first into cyclohexane derivatives in the boat conformation, then into n-butane derivatives in the anti-syn-anti conformation, and eventually into assemblies of two molecules, Ph-CH(3) and CH(3)-X, appropriately oriented and kept at a fixed distance. For each variable substituent the deformation of the benzene ring relative to X = H remains substantially the same even when the substituent and the phenyl group are no longer connected by covalent bonds. This provides unequivocal evidence that long-range polar effects in bicyclo[2.2.2]octane derivatives are actually field effects, being transmitted through space rather than through bonds. Varying the substituent X in a series of Ph-C(CH(2)-CH(2))(3)C-X molecules gives rise to geometrical variation (relative to X = H) not only in the benzene ring but also in the bicyclo[2.2.2]octane cage. The two deformations are poorly correlated. The rather small deformation of the benzene ring correlates well with traditional measures of long-range polar effects in bicyclo[2.2.2]octane derivatives, such as sigma(F) or sigma(I) values. The much larger deformation of the bicyclo[2.2.2]octane cage is controlled primarily by the electronegativity of X, similar to deformation of the benzene ring in Ph-X molecules. Thus the field and electronegativity effects of the substituent are well separated and can be studied simultaneously, as they act on different parts of the molecular skeleton.     

Conformation of N‐methyl‐4‐piperidyl 2,4‐dinitrobenzoate

The crystal structure of N‐methyl‐4‐piperidyl 2,4‐di­nitro­benzoate, C₁₃H₁₅N₃O₆, (I), at 130 (2) K reveals that, in the solid state, the mol­ecule exists in the equatorial conformation, (Ieq). Thus, the through‐bond interaction present in the axial conformation, (Iax), is not strong enough to overcome the syn–diaxial interactions between the axial methyl substituent and the axial H atoms on the two piperidyl ring C atoms either side of the ester‐linked ring C atom. The carboxyl­ate group in (I) is orthogonal to the aromatic ring, in contrast with other 2,4‐di­nitro­benzoates, which are coplanar. The piperidyl–ester C—O bond distance is 1.467 (3) Å, which is actually shorter than other equatorial cyclo­hexyl–ester C—O distances. This shorter piperidyl–ester C—O bond distance is due to the reduced electron demand of the orthogonal ester group.     

Conformational stability and vibrations of aminopropylsilanol molecule

Density functional theory (DFT), using the B3-LYP/6-31G(d,p) method have been used to investigate the conformation and vibrational spectra of aminopropylsilanetriol (APST) NH2CH2CH2CH2Si(OH)3. The potential function for CCCSi torsion gives rise to two distinct conformers trans and gauche. The predicted energy of the more stable trans conformer is 337 cm-1 less than the energy of gauche conformer. The calculated barriers to the conformation interchange are: 1095, 2845 and 438 cm-1 for the trans to gauche, gauche to gauche and gauche to trans conformers, respectively. For the trans conformer the potential energy curve for the Si(OH)3 groups torsion in APST has been calculated changing the HOSiC dihedral angle. The barrier for the internal rotation of 3065 cm-1 has been obtained. The optimized molecular structure of APST dimer calculated for trans conformer has a SiOSi angle of 143.2 degrees, and a SiOSi bond length of 0.164 nm. A complete vibrational assignment for both conformers as well as for trans-dimer is supported by the normal coordinate analysis, calculated IR intensities as well as Raman activities. On the basis of the results, the vibrational spectra of APST aqueous solution and APST polymer have been analyzed. The average error between the observed and calculated frequencies is 14 cm-1.     

Intramolecular electron transfer in heterosubstituted benzene derivatives as probed by dissociative electron attachment

The electron transmission and dissociative electron attachment spectra of the 1-chloroalkyl benzene derivatives, C(6)H(5)(CH(2))(3)Cl and C(6)H(5)(CH(2))(4)Cl, and of the sulfur and silicon derivatives, C(6)H(5)SCH(2)Cl, C(6)H(5)Si(CH(3))(2)CH(2)Cl and C(6)H(5)CH(2)Si(CH(3))(2)CH(2)Cl, are presented for the first time. The relative Cl(-) fragment anion currents generated by electron attachment to the benzene pi* LUMO are measured in the series C(6)H(5)(CH(2))(n)Cl, with n = 1-4, and in the heteroatomic compounds. The Cl(-) yield reflects the rate of intramolecular electron transfer between the pi-system and the remote chlorine atom, which in turn depends on the extent of through-bond coupling between the localized pi* and sigma*(Cl-C) orbitals. In compounds C(6)H(5)(CH(2))(n)Cl the Cl(-) current rapidly decreases with increasing length of the saturated chain. This decrease is significantly attenuated when a carbon atom of the alkyl skeleton is replaced with a third-row heteroatom. This greater ability to promote through-bond coupling between the pi* and sigma*(Cl-C) orbitals is attributed to the sizably lower energy of the empty sigma*(S-C) and sigma*(Si-C) orbitals with respect to the sigma*(C-C) orbitals. In the sulfur derivative the increase of the Cl(-) current is larger than in the silicon analogue. In this case, however, other negative fragments are observed, due to dissociation of the S-C bonds.     

Shape of 4S- and 4R-hydroxyproline in gas phase

The alpha-amino acids 4(S)-hydroxyproline and 4(R)-hydroxyproline have been studied under isolation conditions in gas phase using laser-ablation molecular-beam Fourier transform microwave spectroscopy. Two conformers of each molecule have been detected in the jet-cooled rotational spectrum. The most stable conformer in both molecules exhibits an intramolecular N...H-O hydrogen bond (configuration 1) between the hydrogen atom of the carboxylic group and the nitrogen atom. The second conformer is characterized by an intramolecular N-H...O=C hydrogen bond (configuration 2). The conformers of 4(R)-hydroxyproline adopt a C(gamma)-exo puckering, while those of 4(S)-hydroxyproline present a C(gamma)-endo ring conformation. These ring conformations, which show the same propensity observed in collagen-like peptides, are stabilized by additional intramolecular hydrogen bonds involving the 4-hydroxyl group, with the exception of the most stable form of 4(S)-hydroxyproline for which a n-pi interaction between the oxygen atom of the 4-hydroxyl group and the carboxyl group carbon seems to be established. A gauche effect could be also contributing to stabilize the observed conformers.     

Vibrational analyses of vinylsulfonamide CH2CHSO2NH2

The structure and conformational stability of vinylsulfonamide CH2CHSO2NH2 were investigated by DFT-B3LYP/6-311+G** and ab initio MP2/6-311+G** calculations. From the calculations the molecule was predicted to exist predominantly in the gauche-syn (vinyl group nearly eclipses one of the SO bonds and the NH2 and the SO2 moieties eclipse each other) conformation with the possibility of low abundance of the cis-syn and the gauche-anti forms. The asymmetric potential function for the internal rotation about CS bond was determined for the molecule. The vibrational frequencies were computed at DFT-B3LYP level for the gauche-syn conformer of the molecule and its d2(C2H3SO2ND2) and d3(C2D3SO2NH2) deuterated species. Normal coordinate calculations were then carried out and the potential energy distributions were calculated for the molecule.     

Cobalt-mediated selective B-H activation and formation of a Co-B bond in the reaction of the 16-electron CpCo half-sandwich complex containing an o-carborane-1,2-dithiolate ligand with ethyl diazoacetate

The reaction of the 16-electron half-sandwich complex CpCo(S(2)C(2)B(10)H(10)) (1; Cp = cyclopentadienyl) with ethyl diazoacetate (EDA) at ambient temperature leads to compounds CpCo(S(2)C(2)B(10)H(10))(CHCO(2)Et) (2), CpCo(S(2)C(2)B(10)H(8))(CHCO(2)Et)(CH(2)CO(2)Et)[CH(CO(2)Et)(CH(2)CO(2)Et)] (3), CpCo(S(2)C(2)B(10)H(9))(CH(2)CO(2)Et)(CHCO(2)Et)(2) (4), CpCo(S(2)C(2)B(10)H(9))(CHCO(2)Et)(CH(2)CO(2)Et) (5), and CpCo(S(2)C(2)B(10)H(9))(CHCO(2)Et)(2)(CH(2)CO(2)Et) (6). In 2, the EDA molecule has been inserted into one Co-S bond in 1 with the loss of N(2) to form an 18-electron compound containing a three-membered metallacyclic ring. In 3, two B-H bonds of the carborane cage have been activated and the unusual B4-H bond activation leads to the formation of a stable Co-B bond. Two EDA molecules are inserted into the Co-B3 bond to generate an unexpected six-membered heterocyclic ring Co-B-B-C-C-O. In 4, a stable Co-B bond is present as well but in the position B3/B6, and two EDA molecules are inserted into one Co-S bond to produce a five-membered heterocyclic ring Co-C-C-C-O. In 5, one EDA is inserted into the Co-B bond with the formation of a C-B bond in the position B3/B6. One more EDA is inserted into the Co-S bond in 5 to generate 6. Upon heating, 6 loses the BH vertex close to the two carbon atoms to lead to CpCo(S(2)C(2)B(9)H(9))(CHCO(2)Et)(CH(2)CO(2)Et)(2) (7) containing a nido-C(2)B(9) unit. All of the new compounds 2-7 were characterized by NMR spectroscopy ((1)H, (11)B, and (13)C), mass spectrometry, IR spectroscopy, and elemental analysis, and their solid-state structures were further characterized by X-ray structural analysis.     

Mono and double polar [4 + 2(+)] Diels-Alder cycloaddition of acylium ions with O-heterodienes

Gas-phase reactions of acylium ions with alpha,beta-unsaturated carbonyl compounds were investigated using pentaquadrupole multiple-stage mass spectrometry. With acrolein and metacrolein, CH(3)-C(+)(double bond)O, CH(2)(double bond)CH-C(+)(double bond)O, C(6)H(5)-C(+)(double bond)O, and (CH(3))(2)N-C(+)(double bond)O react to variable extents by mono and double polar [4 + 2(+)] Diels-Alder cycloaddition. With ethyl vinyl ketone, CH(3)-C(+)(double bond)O reacts exclusively by proton transfer and C(6)H(5)-C(+)(double bond)O forms only the mono cycloadduct whereas CH(2)(double bond)CH-C(+)(double bond)O and (CH(3))(2)N-C(+)(double bond)O reacts to great extents by mono and double cycloaddition. The positively charged acylium ions are activated O-heterodienophiles, and mono cycloaddition occurs readily across their C(+)(double bond)O bonds to form resonance-stabilized 1,3-dioxinylium ions which, upon collisional activation, dissociate predominantly by retro-addition. The mono cycloadducts are also dienophiles activated by resonance-stabilized and chemically inert 1,3-dioxonium ion groups, hence they undergo a second cycloaddition across their polarized C(double bond)C ring double bonds. (18)O labeling and characteristic dissociations displayed by the double cycloadducts indicate the site and regioselectivity of double cycloaddition, which are corroborated by Becke3LYP/6-311++G(d,p) calculations. Most double cycloadducts dissociate by the loss of a RCO(2)COR(1) molecule and by a pathway that reforms the acylium ion directly. The double cycloadduct of the thioacylium ion (CH(3))(2)N-C(+)(double bond)S with acrolein dissociates to (CH(3))(2)N-C(+)(double bond)O in a sulfur-by-oxygen replacement process intermediated by the cyclic monoadduct. The double cycloaddition can be viewed as a charge-remote type of polar [4 + 2(+)] Diels-Alder cycloaddition reaction.