syn,E-1-cyclopentano-4-ethyl-3-thiosemicarbazone and syn,E-1-cyclopentano-4-phenyl-3-thiosemicarbazone

The structures of two thiosemicarbazones are described: syn,E-1-cyclopentano-4-ethyl-3-thiosemicarbazone (1) and syn,E-1-cyclopentano-4-phenyl-3-thiosemicarbazone (2). Crystal data: for 1: tetragonal, P4₃ (#78), a = b = 8.922(7) Å, c = 12.899(13) Å, and Z = 4; for 2: monoclinic a = 15.163(18) Å, b = 7.482(5) Å, c = 12.467(15) Å, = 119.04(7)°, and Z = 4. In 1, molecules are linked by hydrogen-bonding into infinite chains with non-planar 9-ring subunits in which thioamides interact with the H—N—C—N—N groups of neighbors. Thioamide groups in 2 form dimers linked by N—B···HS hydrogen-bonds with a planar 8-ring as in solid state structures of carboxylic acids. The semicarbazide syn conformation fosters formation of N—H···N intramolecular hydrogen-bonding in each structure. The solid state structures are consistent with their infrared and proton nuclear magnetic resonance spectra.     

Structures of Eight Thio(semi)carbazones Derived from 2-Acetylpyrazine, 2-Acetythiazole and Acetophenone

Abstract  The structures of eight related thio(semi)carbazones are described. These are syn,1E-2-acetylpyrazine-3-thiosemicarbazone (1), syn,1E,4Z-2-acetylpyrazine-4-ethyl-3-thiosemicarbazone, (2) and syn,1Z-2-acetylpyrazine-4,4-dimethyl-3-thiosemicarbazone (3), syn,1E,4Z-2-acetylthiazole-4-phenyl-3-thiosemicarbazone (4), syn,1Z-phenyl-4,4-dimethyl-3-thiosemicarbazone (5), syn,1E,4Z-phenyl-4-methyl-3-thiosemicarbazone (6), syn,1E,4Z-phenyl-4-ethyl-3-thiosemicarbazone (7), syn,1E,4Z-2-acetophenone-5-(N-aminothionyl)-3-thiocarbazone (8). Crystal data: for 1: triclinic, P-1, a = 5.4053(10) ?, b = 7.435(3) ?, c = 11.772(4) ?, α = 81.70(3)°, β = 82.59(2)°, γ = 77.38(2)°, and Z = 2: for 2: triclinic, P-1, a = 7.322(3) ?, b = 7.8239(16) ?, c = 9.783(4) ?, α = 87.73(2)°, β = 79.46(3)°, γ = 80.41(2)°, and Z = 2; for 3: orthorhombic, Pnma, a = 13.5210(15) ?, b = 6.6914(5) ?, c = 11.7214(10) ?, and Z = 4; for 4: triclinic, P-1, a = 5.7058(7) ?, b = 9.8776(15) ?, c = 11.869(2) ?, α = 76.389(12)°, β = 86.364(13)°, γ = 88.322(12)°, and Z = 2; for 5: triclinic, P-1, a = 7.5362(3) ?, b = 8.6331(4) ?, c = 9.8753(4) ?, α = 91.401(4)°, β = 102.532(4)°, γ = 110.540(4)°, and Z = 2; for 6: monoclinic, P2(1)/c, a = 10.7178(4) ?, b = 5.5866(2) ?, c = 18.7647(9) ?, β = 104.392(5)°, and Z = 4; for 7: monoclinic, P2(1)/c, a = 8.9557(3) ?, b = 9.7418(4) ?, c = 13.6864(5) ?, β = 94.044(4)°, and Z = 4; for 8: triclinic, P-1, a = 9.8091(5) ?, b = 10.6173(4) ?, c = 16.4691(7) ?, α = 75.540(4)°, β = 80.305(4)°, γ = 65.192(4)°, and Z = 4. Structures 1, 2, 4, 5, 7, and 8 form intramolecular N4–H···N1 hydrogen-bonds. Structures 3 and 5 exist in the tautomeric form in which N1 is protonated. Graphical Abstract  Structures of thio(semi)carbazones were found to fall into two categories: those with intramolecular N4-H…N1 hydrogen-bonds, and those which show a tautomeric form in which N1 is protonated.      

Crystal and molecular structure of the bidentate ligand 2,2-di(1-pyrazolyl)propane,CH3C(C3N2H3)2CH3

The title compound lies on a site of C₂ symmetry, with the two planar pyrazolyl moieties oriented at 86.1° to one another. The hydrogen atoms were located and refined.     

Crystal and molecular structure of di(1-pyrazolyl)methane,CH2(C3N2H3)2

The title compound consists of two planar pyrazolyl fragments oriented at 73.0° to each other and linked to a common carbon atom. All hydrogen atoms were located unambiguously and their positions were refined.     

Crystal structures of 3-[1-Benzenesulfonyl-3-phenylsulfanyl-1H-indol-2-yl]-1-[4-(methyl (I)/methoxy (II) phenyl)]-2-phenyl-propane-1-one

The compounds 3-(1-Benzenesulfonyl-3-phenylsulfanyl-1H-indol-2-yl)-1-[4-methyl (I)/methoxy (II)phenyl)]-2-phenyl-propane-1-one crystallize in triclinic space group P . The details are: compound I a = 11.941(6) ?, b = 12.154(7) ?, c = 13.006(7) ?, α = 63.124(8)°, β = 84.464(9)°, γ = 64.810(8)°, V = 1519.7(14) ?³, Z = 2, D _cal = 1.284 Mg m⁻³, and R = 0.0382 (wR = 0.0978); compound II a = 11.897(6) ?, b = 12.268(6) ?, c = 13.001(7) ?, α = 61.919(8)°, β = 83.480(8)°, γ = 64.676(7)°, V = 1504.0(14) ?³, Z = 2, D _cal = 1.333 Mg m⁻³, and R = 0.0422 (wR = 0.1049). The indole ring system in both the molecules I and II are not strictly planar and the dihedral angles formed by the pyrrole and benzo planes are 4.0(7)° and 3.5(8)°, respectively. The C–HO, C–Hπ and ππ types of interactions stabilize the molecules in the unit cell in addition to van der Waal's forces in I and II.     

Crystal and Molecular Structure of the 1:2 Salt Formed Between 1,2-(4-Pyridyl)Ethane and 2-(4-Hydroxyphenylazo)Benzoic Acid

Abstract  Proton transfer occurred during co-crystallization of 1,2-(4-pyridyl)ethane with 2-(4-hydroxyphenylazo)benzoic acid to yield a salt comprising a 1:2 ratio of 1,2-bis(4-pyridinium)ethane dications and 2-(4-hydroxyphenylazo)benzoate anions. Centrosymmetrically related anions associate by charge-assisted O–H···O hydrogen bonds to form 24-membered {···OC₃N₂C₄OH}₂ synthons. These are connected into a supramolecular polymer via charge-assisted N–H···O hydrogen bonds involving the 1,2-bis(4-pyridinium)ethane dications. The compound crystallizes in the triclinic space group P−1 with a = 8.517(4) ?, b = 9.110(5) ?, c = 10.477(5) ?, α = 96.850(13)°, β = 94.446(12)°, γ = 104.946(10)° and Z = 1 {two anions and a dication}. Index Abstract  Supramolecular chains mediated by charge-assisted O–H···O and N–H···O hydrogen bonding are found in the salt containing a 1:2 ratio of 1,2-bis(4-pyridinium)ethane dications and 2-(4-hydroxyphenylazo)benzoate anions.      

Synthesis,Characterization and Crystal Structure of Ethyl 2-amino-4-(4-fluorophenyl)-6-phenylcyclohexa-1,3-diene-1-carboxylate

Ethyl 2-amino-4-(4-fluorophenyl)-6-phenylcyclohexa-1,3-diene-1-carboxylate was synthesized from ethyl 6-(4-bromophenyl)-4-(4-fluorophenyl)-2-oxocyclohex-3-ene-1-carboxylate and ammonium acetate in glacial acetic acid. The synthesized compound was characterized by elemental analysis, FT-IR, thermogravimetric analysis (TGA), differential thermal analysis (DTA), UV-Visible, and single-crystal X-ray diffraction. The title compound, ethyl 2-amino-4-(4-fluorophenyl)-6-phenylcyclohexa-1,3-diene-1-carboxylate, C₂₁H₂OFNO₂, crystallizes in the orthorhombic space group Pbca with the following unit-cell parameters: a = 17.417(2), b = 9.7287(9), c = 21.014(2) Å, and Z = 8. The crystal structure was solved by direct methods using single-crystal X-ray diffraction data collected at room temperature and refined by full-matrix least-squares procedures to a final R-value of 0.0644 for 1616 observed reflections. An intramolecular N–H…O hydrogen bond generates an S(6) graph-set motif. In the crystal, molecules are linked by N–H…O hydrogen bonds, forming a two-dimensional network.     

Complexation with diol host compounds. Part 36: inclusion compounds of 1,1,6,6-tetraphenylhexa-2,4-diyne-1,6-diol with benzene, toluene and mesitylene

The title compound 1,1,6,6-tetraphenylhexa-2,4-diyne-1,6-diol (H) forms inclusion compounds with benzene, toluene and mesitylene. H·C₆H₆ (1) and H·C₇H₈ (2) crystallize in the triclinic space group P(-1) with unit cell dimensions for 1: a = 13.001(3) ?, b = 15.284(3) ?, c = 16.744(3) ?, α = 99.26(3)°, β = 74.78(3)°, γ = 64.96(3)°, Z = 4 and for 2: a = 12.922(3) ?, b = 15.159(3) ?, c = 16.562(3) ?, α = 68.12(3)°, β = 73.99(3)°, γ = 66.00(3)°, Z = 4. The hydroxyl groups of adjacent host molecules are involved in hydrogen bonding. H·C₉H₁₂ (3) exhibits a different packing arrangement with weak hydrogen bonding between the hydroxyl hydrogen of the host and the phenyl ring of the guest. The crystal system of compound 3 is monoclinic with space group C2/c, a = 23.750(5) ?, b = 8.4746(17) ?, c = 17.760(4) ?, α = 90°, β = 123.40(3)°, γ = 90°, Z = 4. The thermal behaviour of these compounds has also been studied.     

Crystal structures of N1, N5‐dibenzoyltetrahydro‐4‐methyl‐1, 5‐benzodiazepin‐2‐one (DBTBO) and tetrahydro‐4‐methyl‐1, 5‐benzodiazepin‐2‐one (TBO)

Adducing structural analogies between the two fused systems, N1, N5‐Dibenzoyltetrahydro‐4‐methyl‐1,5‐benzodiazepin‐2‐one, C₂₄H₂₀N₂O₃ (DBTBO CCDC 200341) and Tetrahydro‐4‐methyl‐1,5‐benzodiazepin‐2‐one, C₁₀H₁₂ N₂O (TBO CCDC 200342) helps to find the pharmacological differences from the view point of variant hetero atom substitutions in the hetero cycle. Both the diazepines crystallized in identical monoclinic space group P2₁/n with a = 14.1134(1) Å, b = 9.2444(1) Å, c = 16.3812(1) Å; β = 107.11(1)º, V = 2042.7(3) ų for DBTBO and a = 9.3363(7) Å, b = 10.4895(8) Å, c = 9.9852(7) Å, β = 91.314(1)º, V = 977.62(1) ų for TBO, respectively. The two structures were solved by direct methods and refined by full‐matrix least‐squares procedure to final R‐values of R1 = 0.0575(DBTBO) and R1 = 0.0984(TBO). Structural differences include non‐identical boat conformations of these seven‐membered rings and the different non‐bonding interactions in the benzodiazepine pair.     

Crystal structure of [Cu2(II)(dmpa)2(p-Cl-C6H5COO)2] (Hdmpa = N,N-dimethyl-3-amino-1-propanol)

The copper complex, [Cu₂(II)(dmpa)₂(p-Cl-C₆H₅COO)₂], has been prepared and its structure determined using X-ray crystallography. The dimer is a di-₂-alkoxo complex which is a five-coordinate copper dimer with unsupported alkoxo bridges. The complex crystallizes in the triclinic space group P-1 with a = 11.384(2), b = 14.636(5), c = 9.609(2) Å, = 100.07(2), = 104.33(3), = 72.79(2)°, V = 1471.8(7) ų, and Z = 2. The structure is comprised of discrete binuclear clusters in which the metal atoms are bridged by two alkoxo oxygens of the dmpa^– ligands. The Cu-O and Cu-N distances are in good agreement with those found for other copper(II) aminoalcoholato complexes. The Cu···Cu distance is 2.9765(6) Å. In the crystal, every two dimeric coordination molecules are combined together by the recognition through intermolecular hydrogen-bonding interactions between the apical water molecule and the non-coordinated O atom from the p-chlorobenzoato ligand, forminga tetramer.     

Molecular structure and 1H, 13C NMR assignments of 1,3,5-tris(imidazol-1-ylmethyl)-2,4,6-trimethylbenzene

The molecule 1,3,5-tris(imidazol-1-ylmethyl)-2,4,6-trimethylbenzene (titmb) crystallizes as a monohydrate in the monoclinic space group C2/c with a = 20.888(4), b = 13.220(2), c = 14.385(2) Å, = 90.36(1)°. Two of three imidazole groups are on one side of the central benzene ring, and the other one is on the opposite side. The crystal packing of titmb is stabilized by O-H--N hydrogen bonding between the water molecule and nitrogen atoms of the imidazole group. The complete ¹H and ¹³C NMR assignments for titmb were carried out by 2D NMR spectral measurements.     

Crystal and molecular structure of trans‐(±)‐3‐acetoxy‐2‐(4‐methoxyphenyl)‐4‐oxo‐2,3,4,5‐tetrahydro‐1,5‐benzothiazepine‐1‐oxide

The title compound is a structurally related isomer of diltiazem, a well known drug. This compound (C₁₈H₁₇NO₅S) crystallizes in the space group P2₁/n with a = 13.803(4), b = 7.704(3), c = 16.093(3) Å, β = 105.37(2)º, Z = 4, V = 1650.1(9) ų. The least‐squares refinement gave residual index R = 0.067 for 2831 observed reflections. The distorted seven‐membered ring in the molecule shows twist‐boat conformation. Hydrogen bonds in which the amide group at one molecule and a carbonyl group in the adjacent molecule are involved to form centrosymmetric dimers in the crystal. (© 2006 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim)     

Crystal structure and low-temperature emission of 2,9-dimethyl-1, 10-phenanthrolinebis(triphenylphosphinesulfide)copper(I)

The synthesis and crystal structure of a luminescent Cu(I) complex containing triphenylphosphine sulfide and the -diimine 2,9-dimethyl-1, 10-phenanthroline (dmp) is described. The coordination geometry about the Cu(I) center is pseudo-tetrahedral. Interplanar interactions between phenyl groups on the phosphine sulfide ligands and the phenanthroline exist, but are significantly less than those previously reported for the Cu(I) triphenylphosphine analog. The complex displays emission from a single metal-centered charge-transfer state at 77K in a 41 ethanol/methanol (v/v) glass. This is in contrast to the triphenylphosphine complex, which exhibits dual luminescence from a charge-transfer and an intraligand state at 77K. Crystal data: orthorhombic, P2₁2₁2₁,a=9.4226(9) Å,b=15.757(1) Å,c=30.494(6) Å,V=4527.4(6) ų, andR=0.053 (1021 reflections).     

Crystal structure and hydrogen bonding of propargylammonium hexafluorosilicate, 2(C3H6N)+ (SiF6)2?

The X-ray crystal structure of propargylammonium hexafluorosilicate, 2(C₃H₆N)⁺ (SiF₆)²⁻, is determined. The SiF₆ anion is involved in N−H...F and C−H...F interactions with eight surrounding cations. This involves two-three-and four-center N−H...F hydrogen bonds, and additional C−H...F interactions with C...F distances down to 2.963(6) ?. The alkynyl C−H donors form only C−H...F interactions of unfavorable geometries.     

Structure determination and hydrogen bonding of 1-naphthoxyacetic acid, a potential plant growth hormone

1-Napthoxyacetic acid crystallizes in the centrosymmetric space group C2/c (No. 15) with cell dimensions of a=14.273(2)Å, b=5.845(1)Å, c=24.211(1)Å, =105.815(2)°. The structure of the title compound reveals a carboxyl group-naphthalene ring dihedral angle of 4.85(14)°, O—H- - -O hydrogen bonded dimer, hydrogen bond distance of 2.640(2)Å, hydrogen bond angle of 172(2)°, and a cis configuration of O2 (double bond) and O3 relative to the C11—C12 bond all of which indicate that the title compound may be effective as a plant growth hormone.     

Molecular structure and crystal packing of uncomplexed 1,6-bis(N-cyano-p-methoxy-anilino)-2,4-hexadiyne, C22H18N4O2

The X-ray crystal structure of 1,6-bis(N-cyano-p-methoxy-anilino)-2,4-hexadiyne, C₂₂H₁₈N₄O₂, is determined. The crystal packing is dominated by phenyl stacking interactions. Weak C–H···N hydrogen bonds help align the molecules. C–H··· hydrogen bonding is not apparent.     

Thermal and phase behaviour studies of hydrogen-bonded compounds (SA:nOBA) using POM,DSC and image-processing techniques

A novel series of hydrogen-bonded liquid crystals are synthesised. The hydrogen bond is formed between non-mesogenic salicylic acid and the mesogenic p-n-alkoxy benzoic acids with n = 4–8, 10–12 and 16. The formation of hydrogen bond is confirmed from infrared studies. The transition temperatures and the phase identification are made with the use of polarising microscope (POM) attached with a hot stage. Further, the heats of transition and enthalpies are obtained by employing the differential scanning calorimeter (DSC). Along with POM and DSC, textural image analysis is done by image-processing techniques using MATLAB software and transition temperatures are identified. The results reveal that the compounds with the chain number n = 7, 8, 10–12 show the manifestation of smectic-B phase by quenching smectic-C phase.     

Synthesis, Fourier-transform Raman and infrared spectroscopic analysis, and crystal structure of (NiL)2, (L = bis(2,4-dimethyldipyrrin-3-yl)methane)

The Ni(II) complex with bis(2,4-dimethyldipyrrin-3-yl)methane, (NiL)₂, has been synthesized and characterized by ¹H-NMR, UV–Vis, FT-IR, FT-Raman, MS, and elemental analysis. X-ray diffraction analysis at room temperature indicates that the complex crystallizes in triclinic system, space group P–1 with a = 11.344(4), b = 12.703(4), c = 14.936(5) Å, = 87.017(6)°, = 75.379(5)°, = 75.318(5)°, M _r = 826.31, V = 2014.5(11) ų, Z = 2. The crystal structure of the title complex reveals that it is a dinuclear double-stranded helical entity. The ligands perform as tetradentate ligands and the ratio of Ni(II) to ligand is 2:2. The central Ni(II) atom is tetracoordinated by four nitrogen donors of two ligands and the coordination geometry of Ni(II) can be considered as a distorted tetrahedron configuration. The IR and Raman spectral analysis, assignment, and discussion are presented.