An improved model of the fringing fields of a quadrupole mass filter

The fringing field region of a quadrupole mass filter is modelled using an iterative finite difference technique to solve Laplace's equation for the electrostatic potential. The results are used to formulate an expression f(z) such that the electrostatic potential of the fringing field, F(x, y, z, t) may be written in the form F(x, y, z, t) = f(z) φ(x, y, t), where φ(x, y, t) is the hyperbolic field of the quadrupole. The function f(z) is expressed in the form f(z) = 1 - exp {- az - bz²}), where a and b are constants and z is in units of r_O, where 2r_O is the spacing of the quadrupole rods. The effect of the distance from the quandrupole rods to the end plate of the quadrupole mass filter, d on f(z) is investigated and the results presented show that for d < 0.125 r_O the function f(z) does not alter significantly.     

Molecular energy parameters by solution thermodynamics

The relationships between statistical thermodynamics and equilibrium constants, either cumulative, stepwise or specific site constants are investigated. In order to show the link between equilibrium constants and statistical thermodynamic microscopic properties, a distinction has been introduced between non-reacting and reacting systems. The non-reacting systems are those for which continuous statistical distributions of enthalpies can be assumed. The distribution function can be obtained as an integral of the interparticle potential extended to the whole ensemble. Molecular partition functions ζ_A, are used to describe the properties of the ensembles. The reacting ensemble is represented by distinct distributions of enthalpies, each distribution being grouped around a mean value. Each level is representative of one species. Around each mean level the distribution is continuous as in non-reacting ensembles. The reacting ensemble of particles is described by a grand canonical molar partition function Z_M=(1+kγ(i)[A])^t where k is the specific site constant, γ(i) is the cooperativity function, [A] is the concentration of free ligand, and the power t indicates the maximum number of i sites in one class. The specific site constant k is proportional to the affinity of binding and is related to the depth of the minimum of the potential function. The factor γ_i is the cooperativity factor given by the value of the cooperativity function γ(i) at the ith level and indicates how the depth of the potential function is affected by previous binding of a ligand. The values of the stability constant and cooperativity factor can be optimized by a computer program. The derivatives of the partition function Z_M with respect to ln[A] correspond to the formation function 〈n〉 (first derivative) and to the buffer capacity B_C (second derivative). The derivatives of the partition function Z_M with respect to temperature are reaction enthalpy ΔH (first derivative with −(1/T)) and apparent heat capacity ΔC_p,app (second derivative with ln T). The denaturation heat obtained by integration of ΔC_p,app dT for many proteins explains why the denaturation enthalpy depends linearly upon T.     

Effect of Artabotrys odoratissimus extract as an environmentally sustainable inhibitor for mild steel corrosion in 0.5 M H2SO4 media

Artabotrys odoratissimus inhibitory effect on mild steel (MS) corrosion in 0.5 M H₂SO₄ solution has been assessed utilizing mass loss, electrochemical potentiodynamic polarization, and impedance spectroscopy techniques. The Artabotrys odoratissimus plant has a wide range of bioactive compounds. Phytochemicals were tested for ethanolic Artabotrys odoratissimus leaves extract (AOLE) using the FeCl₃ test, Salkowaski's test, and others. Corrosion tests were conducted at varying inhibitor concentrations and temperatures. The inhibitory impact of AOLE on corrosion of MS was reported to improve with increasing concentration. Polarization experiments revealed that AOLE is a mixed kind of inhibitor and the inhibition efficacy (η_w) for MS is 93.27% for 1.25 g/L AOLE. For Electrochemical impedance spectroscopy (EIS), maximal inhibitory efficacy (η_w) was 91.62% due to AOLE adsorption on the MS surface. The obtained results using each methodology are highly consistent and closely resemble each other. The adsorption of AOLE molecules on an MS surface from the bulk of the solution causes the inhibitor's inhibition action, and the adsorption mechanism follows Langmuir adsorption isotherm. The computed $\Delta G_{ads}^o$ values ranged between ?32.919 and ?33.520 kJ mol^?1, implying a spontaneous and exothermic inhibitory action. The thermodynamic and activation parameters are often used to understand corrosion inhibition mechanisms. The comparison of corrosion product and pure extract FT-IR spectrum indicates the nature of AOLE adsorption on the MS surface. The surface morphology of MS samples was assessed using atomic force microscopy (AFM), scanning electron microscope (SEM), and contact angle techniques.     

An unusual behaviour of N-(tert-butoxycarbonyl)- and N-pivaloyl-(methylthio)anilines in metallation reactions

The metallation reaction of N-Boc-and N-Piv-(methylthio)anilines are here described. The results show that N-Boc derivatives are metallated only by superbases to give products substituted at the thiomethylic group. N-Piv derivatives show a different behaviour: ortho-derivative is metallated by both butyllithium and superbase at the thiomethylic carbon atom, while para-derivative is metallated in ortho to the N-Piv group by butyllithium and at the thiomethylic carbon atom by superbase. The meta-derivative is metallated only by superbase at the thiomethylic carbon atom.     

Optical potential calculations for molecular collisions

The Feshbach optical formalism is applied to elastic, nonreactive atom-diatom scattering on a single potential energy surface. The optical potential depends on GQ, the resolvent of E-QHQ, where Q projects onto open as well as closed channels. A method for generating GQ is developed which goes beyond the free-space approximation by partitioning the radial part of the intermolecular separation into a set of intervals, on each of which the projected interaction QVQ is represented by a constant diagonal form. The resulting GQ is used in calculations on a model collinear system. The calculations are carried out with various approximations on the full nonlocal optical potential equation for Pψ Emphasis is placed on two of these, one of which is characterized by a local homogeneous equation for Pψ, and the other by a local inhomogeneous equation for Pψ.     

Microwave-assisted guanidinylation in solid phase peptide synthesis: comparison of various reagents

The guanidinylation of a peptide chain on a polymeric support under microwave conditions using derivatives of thioureas—S-alkylisothioureas, pyrazole-carboxamidine, and guanidine as guanidinylating reagents is described. The best results are obtained with N,N′-di-Z-S-methylisothiourea and N,N′-di-Z(2-Cl)-S-methylisothiourea. It is found that guanidinylation with reagents containing Boc groups is accompanied by side reactions.     

A master equation theory of excitonic annihilation phenomena for finite latices of low dimensionality

A master equation is written for the equation of motion for the vector p(t), in which the nth component corresponds to the probability of observing n excitons on a lattice with L sites. The dependence of the properties of p(t) on the magnitude of L, the intensity of excitation, the lattice dimensionality, and the magnitude of the biexcitonic annihilation rate is discussed. The dependence of the biexcitonic annihilation rate on the exciton density is discussed in the context of a simple simulation of exciton annihilation. The applicability of these ideas to excitonic annihilation in polymers is discussed.     

The structure of low temperature triplet energy traps in organic solids from pmdr spectroscopy 11. 1,3,5-Trichloro and hexachlorobenzenes

The new technique of polarized microwave PMDR spectroscopy is used to determine the structure of the low temperature (1.6 – 4.2°K) triplet energy traps. The structure of 1.3,5-trichlorobenzene (Tri-CB) and hexachlorobenzene (HCB) molecules in hexamethylbenzene (HMB) host as well as in their own neat crystals (present as x-traps) is determined from the linear polarization characteristics of their optically detected microwave zerofield (zf) transitions as well as from the analysis of their phosphorescence emission. The former technique gives the direction of the principal magnetic axes of these trap molecules in the crystal as well as the relative order of their zf levels.ln HMB host, deviation from trigonal symmetry is found to be only slight for HCB and absent for Tri-CB. ln the neat crystals, large deviations from trigonal symmetry are observed for the traps of both HCB and Tri-CB. In HCB x- traps, the HCB molecule is found to be slightly contracted along the CCl axis near parallel to the c′ crystal axes. Deviation From planarity is also strongly suggested by the large value of the zf parameter D. ln addition, the principal magnetic axis of the 2|E| moment for HCB x-traps is found to lie only 5° off the molecular N axis. The |D| + |E| and |D| — |E| moments, however, are 15° away from the A and B molecular axis, respectively.In Tri-CB neat crystal. two traps are observed optically with their phosphorescence origins 10 cm^?1 apart. The zf parameter E is found to have a non-zero value and is opposite in sign for the two traps. If the distortion is to be blamed on pseudo-Jahn-Teller forces, the results lead to the conclusion that the x-(shallow) trap is contracted while the y- (deep) trap is expanded along an in-plane axis going through the CCl bonds near parallel to the a axis of the Tri-CB crystal. The plane containing the |D| + |E| and |D| — |E| moments of the x-trap suffers a rotation around the N-molecular axis, which is almost parallel to the 2|E| moment. Th |D| + |E| moment is 10° off the A axis and the |D| — |E| moment is 10° off the B axis. The 2|E| transition moment of the y-trap lies off the molecular N axis and the plane containing the |D| + |E| and |D| — |E| moments moves upward from theThe results of these and other studies suggest that low temperature trapping in neat crystals of this type results from crystal induced geometrical and orientational changes in the molecules at point defects. The observed traps are those molecules for which the crystal field induced deformation leads to a lowering in their singlet-triplet transition energy as compared with that for the host lattice.     

Recent topics in the desymmetrization of meso-diols

The desymmetrization of meso compounds is one of the most effective strategies for asymmetric synthesis. This digest focuses on recent progress in the desymmetrization of meso-diols and their derivatives. The topics discussed here include methods for the enzymatic acylation of meso-diols and the hydrolysis of meso-diesters, acylation, related reactions of meso-diols with organocatalysts and metal catalysts, the oxidation of meso-diols by enzymes, organocatalysts, and metal catalysts, and the desymmetrization of meso-dicarbamates with metal catalysts. The desymmetrization of meso-diols using tandem reactions is also discussed.     

Stability of Rare-Earth Oxychloride Phases: Bond Valence Study

The crystal structures of the tetragonal rare earth (RE) oxychlorides, REOCl (RE=La-Nd, Sm-Ho, and Y) were studied by X-ray powder diffraction measurements, Rietveld analyses, and bond valence calculations. The tetragonal structure (space group P4/nmm, No. 129, Z=2) is stable for all but Er-Lu oxychlorides, which possess a hexagonal structure. The tetragonal structure consists of alternating layers of (REO)_nⁿ⁺ complex cations and Xⁿ⁻ anions, where the rare earth is coordinated to four oxygens and four plus one chlorines in a monocapped tetragonal antiprism arrangement. The Rietveld analyses yielded a coherent series of structural parameters. Preferred orientation and microabsorption effects were found significant. The evolution of interatomic distances and bond angles indicated that the reason for the preferred structure changing from tetragonal to hexagonal is the strain in the chlorine layer. The bond valence parameter B for the RE-O bonds had to be recalculated due to the covalent nature of the (REO)_nⁿ⁺ unit. The results obtained with the new parameter confirmed the strains in the chlorine layer to be the cause for the phase transition.     

Crystal structure and magnetic structure of TbOOH

The monoclinic modification of terbium oxide hydroxide, TbOOH, was prepared using hydrothermal technique. The crystal structure was investigated by three-dimensional single-crystal X-ray analysis and was refined to a conventional R-value of 8.1%. The space group is $\text{P2}{}_1\text{m}$, No. 11, with a = 6.04 Å, b = 3.69 Å, c = 4.33 Å, and β = 109.0°. The terbium atom is seven coordinated with oxygen atoms, and the structure is not hydrogen bonded.The compound is antiferromagnetic with a Néel temperature of 10°K. Neutron diffraction powder patterns were measured at 300°K and 4.2°K. The magnetic super lattice reflections were indexed on the basis of a monoclinic unit cell with the dimensions a_M = 2a, b_M = b, c_M = c, and β_M = β, where a, b, c, and β are the dimensions of the chemical unit cell. The structure contains two independent magnetic atoms. A nonclinear antiferromagnetic arrangement of the spins describes the magnetic structure. The spin at one atom has an angle of 43° with the ac plane and the projection of the spin on the ac plane has an angle of 59° with the a axis. The spin on the other atom has an angle of ?43° with the ac plane, the projection having the same angle of 59° with the a axis.     

Asymmetric Epoxidation of Olefins with Sodium Percarbonate Catalyzed by Bis-amino-bis-pyridine Manganese Complexes

Asymmetric epoxidation of a series of olefinic substrates with sodium percarbonate oxidant in the presence of homogeneous catalysts based on Mn complexes with bis-amino-bis-pyridine ligands is reported. Sodium percarbonate is a readily available and environmentally benign oxidant that is studied in these reactions for the first time. The epoxidation proceeded with good to high yields (up to 100%) and high enantioselectivities (up to 99% ee) using as low as 0.2 mol. % catalyst loadings. The epoxidation protocol is suitable for various types of substrates, including unfunctionalized alkenes, α,β-unsaturated ketones, esters (cis- and trans-), and amides (cis- and trans-). The reaction mechanism is discussed.     

Identification of the geometrical isomers of α-linolenic acid using gas chromatography/mass spectrometry with a binary decision tree

Gas chromatography, using a highly polar column, low energy (30 eV) electron ionization mass spectrometry and multivariate curve resolution, are combined to obtain the mass spectra of all eight geometrical isomers of α-linolenic acid. A step by step Student's t-test is performed on the m/z 50-294 to identify the m/z by which the geometries of the double bonds could be discriminated. The most intense peak discriminates between cis (m/z 79) and trans (m/z 95) at the central (carbon 12) position. The configuration at carbon 15 is then distinguished by m/z 68 and 236, and finally the geometry at carbon 9 is determined by m/z 93, 173, 191 and 236. A three-question binary tree is developed based on the normalized intensities of these ions by which the identity of any given isomer of α-linolenic is accurately determined. Application of Bayes theorem to data from independent samples shows that the complete configuration is determined correctly with a minimum probability of 87%.     

Aminolysis of glycal-derived allyl epoxides and activated aziridines. Effects of the absence of coordination processes on the regio- and stereoselectivity

The addition of primary and secondary aliphatic amines to glycal-derived allyl epoxides is completely 1,2-regio- and anti-stereoselective, whereas mixtures of the corresponding anti-1,2- [3-N-(substituted-amino) glycals] and anti-1,4-addition products (N-glycosyl amines) are obtained with N-(mesyl)-aziridines. In this way, structural moieties, otherwise difficult to synthesize, are obtained by means of a very simple protocol. The regio- and stereoselectivity observed with epoxides is the consequence of an isomerization process, whereas the result obtained with aziridines is explained by the absence of an effective substrate-nucleophile (amine) coordination.     

Experimental study of short- and long-time diffusion regimes of spherical particles in carboxymethylcellulose solutions

The behavior of latex particles in carboxymethylcellulose (CMC) solutions with different probe radii and solution concentrations is investigated. The diffusion processes of probe particles are studied by means of dynamic light scattering experiments. The existence of two diffusion regimes (a short-time regime and a long-time regime) is established for concentrations higher than the threshold value which changes for each probe dimension. Information is also provided about the relative weight of the probe population undergoing the two diffusion processes. This experimental evidence is discussed in connection with the existence of a defined volume (cage) in which short-time diffusion is the characteristic motion, while the long-time diffusion process dominates the motion over all the cages. Furthermore, there was found to be some deviation from Stokes-Einstein behavior.     

Some difficulties in the application of the concept of density of states

The problem of defining N(E), the density of states, for molecular systems is discussed. It is shown that a numeric evaluation of N(E) is often only approximate, even for continuous data, and is not well defined for quantized systems. The application of the concept of density of states is discussed, particularly with regard to the RRKM theory of unimolecular reactions. The sum of states, W(E), and density of states curves are evaluated for several harmonic and anharmonic model systems and the results discussed in order to illustrate the foregoing considerations.     

Monte Carlo simulation for the adsorption of symmetric triblock copolymers I. Configuration distribution and density profiles of adsorbed chains

Monte Carlo simulations for the adsorption of symmetric triblock copolymers from a nonselective solvent at a solid-liquid interface have been performed on a lattice model. In simulations, triblock copolymer molecules are modeled as self-avoiding linear chains composed of m segments of A and n segments of B arranged as A_m/2B_nA_m/2. Either segment A or segment B is attractive, while the other is non-attractive to the surface. The microstructure of the adsorbed layers, including the segment-density profiles and the size distribution of loops, tails and trains are presented. The effect of the adsorption energy, the bulk concentration, the chain composition, as well as the chain length on various adsorption properties has been studied. The results have shown that the size distribution of various configurations is dependent of the adsorption energy, the chain composition and the chain length. The mean length of the loops, trains and tails is insensitive to the bulk concentration. The mean length of the trains increases and that of the tails decreases as the adsorption energy and the length of the attractive segments increase. The mean length of the loops for the end-adsorbed copolymers appears a maximum and that for middle-adsorbed copolymers appears a minimum as the length of attractive segments increases. The length of the non-attractive segments affects mostly the size distribution of the tails. The longer the chain is, the larger the tail appears. The mean length of the tails and loops increases linearly as the length of the non-attractive segments increases, but that of the trains approximately is unchanged.     

Enantioselective synthesis of α-hydroxy-β-amino acids from α-amino acids mediated by sulfoxides

The synthesis of the optically pure (2S,3S)- and (2R,3S)-3-amino-2-hydroxybutanoic acids from commercially available (S)-alanine derivatives is reported. The key step of the synthetic sequence is the conversion of γ-amino sulfoxides into γ-amino alcohols by treatment with TFAA and sym-collidine. The efficiency of this non-oxidative Pummerer reaction (NOPR) is dependent on the stereochemistry of the starting sulfoxide.     

Two-photon ionization of an inner shell electron of the Cl atom

We have calculated, using second order perturbation theory, the two photon ionization cross section of a K-shell electron of chlorine forE=1.6 keV incident photons. Two classes of intermediate states must be considered, those in which a 1s electron moves to an emptyp-orbital, and those in which an electron from an occupiedp-orbital moves into the continuum. The first class of intermediate states is followed by the ejection of ap-electron into the continuum. The second class of intermediate states is followed by the transfer of a 1s electron into an emptyp-state. The largest contribution comes from 3p →d-continuum followed by 1s → 3p transition. Our result is σ⁽²⁾/I=2.06×10⁴¹ cm⁴/W where σ⁽²⁾ is the two photon ionization cross-section andI is the light intensity.