Anisotropic Electron Conductance Driven by Reaction Byproducts on a Porous Network of Dibromobenzothiadiazole on Cu(110)

Efficiency in charge‐transport is a fundamental but demanding prerequisite to allow better exploitation of molecular functionalities in organic electronics and energy‐conversion systems. Here, we report on a mechanism that enables a one‐dimensional conductance structure by connecting discrete molecular states at 2.1 eV through the pores of a metal–organic network on Cu(110). Two adjacent, periodic and isoenergetic contributions, namely a molecular resonance and the confined surface‐state, add‐up leading to anisotropic structures, as channels, observable in real‐space conductance images. The adsorption configurations of Br atoms, inorganic byproduct of the redox‐reacted 4,7‐dibromobenzo[c]‐1,2,5‐thiadiazole (2Br‐BTD) molecules on the copper surface, drive the confinement of the Cu surface state within the pores and critically control the channel continuity. Small displacements of the Br atoms change the local surface potential misaligning the energy levels. This work visualizes the effect of order‐disorder transitions caused by the movement of single atoms in the electronic properties of two‐dimensional organic networks.     

Pentacene nanorails on Au(110)

We studied the molecular orientation of pentacene monolayer phases on the Au(110) surface by means of near-edge X-ray absorption spectroscopy at the carbon K-shell and scanning tunneling microscopy. The highest coverage phase, displaying a (6 x 8) symmetry, is found to be formed by two types of differently oriented molecules mimicking regular arrays of nanorails. Flat-lying molecules, aligned side-by-side with the long molecular axis along the [001] direction, form long crosstie chains extending in the [110] direction. In between the adjacent flat chains, additional molecules, tilted by 90 degrees around their molecular axis, line up head-to-tail into rails extending along [110]. These molecules are very weakly hybridized with the substrate, as indicated by their lowest unoccupied molecular orbitals, which closely resemble those of the free molecule. The nanorail structure is found to be stable up to 420 K in vacuum and to also remain in place after exposure to air, thus being a template well suited for further self-assembly of organic heterostructures. The tilted quasi-free molecules open the possibility for an optimal lateral pi-coupling to other molecules or molecular assemblies.     

Crystal growth of para-sexiphenyl on clean and oxygen reconstructed Cu(110) surfaces

The formation of crystalline para-sexiphenyl (6P) films on Cu(110) and Cu(110)-(2 × 1)O (Cu-O) has been studied by low energy electron diffraction, X-ray absorption spectroscopy and both in situ and ex situ X-ray diffraction methods to elucidate the transition from the initial monolayers to crystalline thin films. It is found that, for Cu-O, a single and, for Cu(110), a double wetting layer is formed which then acts as a template for the subsequent 3D crystal growth. For both substrates the orientation of the long molecular axes of the 6P molecules in the first layers is conserved for the molecules in the bulk crystals growing on them. The main difference between both systems is that on Cu-O the first monolayer assembles in a form close to that of a 6P bulk plane which can be easily continued by crystallites grown upon them, while on the Cu(110) surface the 6P mono- and bi-layers differ substantially from the bulk structure. The bi-layer forms a complex periodically striped phase. Thin 6P films grow with the 6P(203) crystal plane parallel to the Cu-O substrate surface. For this orientation, the 6P molecules are stacked in layers and the molecules demonstrate only one tilt of the mean molecular plane with respect to the sample surface. On clean Cu(110), a more complex 6P(629) plane is parallel to the substrate surface and this orientation is likely a consequence of the super-molecular long-range periodicity of the second molecular layer striped phase.     

Epitaxial growth of pentacene films on Cu110

The molecular structure of thin pentacene (C(22)H(14)) films grown on a Cu(110) surface has been studied by means of He atom scattering, low energy electron diffraction, thermal desorption spectroscopy, x-ray photoelectron spectroscopy, and x-ray absorption spectroscopy. Depending on the actual film thickness three different crystalline phases have been identified which reveal a characteristic reorientation of the molecular plane relative to the substrate surface. In the monolayer regime the molecules form a highly ordered commensurate (6.5x2) structure with a planar adsorption geometry. For thin multilayers (thickness <2 nm) a second phase is observed which is characterized by a lateral ((-0.65 5.69) ( 1.90 1.37)) structure and a tilting of the molecular plane of about 28 degrees around their long axis which remains parallel to the surface. Finally, when exceeding a thickness of about 2 nm subsequent growth proceeds with an upright molecular orientation and leads to the formation of crystalline films which are epitaxially oriented with respect to the substrate. The present study thus demonstrates that also on metal substrates highly ordered pentacene films with an upright orientation of the molecular planes can be grown. Photoelectron spectroscopy data indicate further that thick films do not grow in a layer-by-layer mode but reveal a significant degree of roughness.     

Thin films of discotic liquid crystals and their applications

ABSTRACT

Discotic liquid crystals (DLCs) are considered as fascinating systems due to their unique property of self-assembly to yield different columnar structures. DLCs are organic semiconductors and create pathways for the development of numerous optical and electrical devices. The thin films of DLCs can be considered as low dimensional system which can exhibit remarkable optical and physical properties. In this article, we present a review on ultrathin films of some interesting DLC molecules at air–water and air–solid interfaces. The Langmuir monolayer and Langmuir–Blodgett films of DLC molecules are extensively studied. The ultrathin films of DLC molecules can yield highly anisotropic layer wherein the molecular orientation and aggregation can have large impact on the physicochemical properties of the film. Different surface phases with different molecular orientations as function of surface density and temperature can be obtained by forming the Langmuir monolayer of the DLC molecules at the air–water interface. The Langmuir monolayer in a particular phase can be deposited onto the active area of a device layer-by-layer by employing a highly controlled Langmuir–Blodgett technique. Here, we report some interesting results related on molecular orientation of the DLC molecules at different interfaces. Such aggregation of DLC molecules in ultrathin films may find applications in thin film-based electro-optical devices.     

Pentacene films on Cu(119)

The molecular structure of thin pentacene film grown on a Cu(119) surface has been studied by near-edge X-ray absorption fine structure spectroscopy and scanning tunneling microscopy. The interaction between the π-molecular orbitals delocalized on the aromatic rings and the underlying copper substrate was deduced from XAS spectra. Pentacene molecules arrange with the main axis almost parallel with the Cu terraces according to the measured polarization dependence of the C 1s absorption spectra. For thickness exceeding 4 nm an upright arrangement of the molecules was observed with a dense herringbone-like ordering. The present study thus demonstrates that highly ordered pentacene films can be obtained on a Cu(119) vicinal surface both in a flat orientation for low coverages and in a bulk-like herringbone orientation for higher coverages.     

Magnetically driven growth of anthracene thin films by organic molecular beam deposition

The possible use of a static magnetic field during organic molecular beam deposition of thin molecular films for inducing some preferential growth is discussed and the magnetic properties of diamagnetic molecules and molecular crystals are recalled. Considering prototypical materials, namely anthracene molecules and potassium phthalate substrates, which interact and may give rise to polycrystalline films with specific orientations, we show that in the presence of a magnetic field the films display a macroscopic preferential orientation as a result of minimization of the magnetic energy contribution. A very good agreement between the results of optical spectroscopy, atomic force microscopy, and predictions made on the basis of the anisotropic magnetic susceptibility of anthracene is found.     

Probing organic layers on the TiO2(110) surface

In this work, we use first principles simulations to provide features of the dynamic scanning force microscopy imaging of adsorbed organic layers on insulating surfaces. We consider monolayers of formic (HCOOH) and acetic (CH(3)COOH) acid and a mixed layer of acetic and trifluoroacetic acids (CF(3)COOH) on the TiO(2)(110) surface and study their interaction with a silicon dangling bond tip. The results demonstrate that the silicon tip interacts more strongly with the substrate and the COO(-) group than the adsorbed acid headgroups, and, therefore, molecules would appear dark in images. The pattern of contrast and apparent height of molecules is determined by the repulsion between the tip and the molecular headgroups and by significant deformation of the monolayer and individual molecules. The height of the molecule on the surface and the size of the headgroup play a large role in determining access of the tip to the substrate and, hence, the contrast in images. Direct imaging of the molecules themselves could be obtained by providing a functionalized tip with attraction to the molecular headgroups, for example, a positive potential tip.     

Molecular orientation of evaporated pentacene films on gold: alignment effect of self-assembled monolayer

Pentacene films deposited on self-assembled monolayers (SAMs) bearing different terminal functional groups have been studied by reflection-absorption IR, grazing angle XRD, NEXAFS, AFM, and SEM analyses. A film with pentacene molecules nearly perpendicularly oriented was observed on Au surfaces covered with an SAM of alkanethiol derivative of X-(CH2)(n)-SH, with X = -CH(3), -COOH, -OH, -CN, -NH(2), C(60), or an aromatic thiol p-terphenylmethanethiol. On the other hand, a film with the pentacene molecular plane nearly parallel to the substrate surface was found on bare Au surface. A similar molecular orientation was found in thinner ( approximately 5 nm) and thicker (100 nm) deposited films. Films deposited on different surfaces exhibit distinct morphologies: with apparently smaller and rod-shaped grains on clean bare Au surface but larger and islandlike crystals on SAM-modified surfaces. X-ray photoemission electron microscopy (X-PEEM) was used to analyze the orientation of pentacene molecules deposited on a SAM-patterned Au surface. With the micro-NEXAFS spectra and PEEM image analysis, the microarea-selective orientation control on Au was characterized. The ability to control the packing orientation in organic molecular crystals is of great interest in fabricating organic field effect transistors because of the anisotropic nature of charge transport in organic semiconducting materials.     

Study on the interaction between tetracene and Cu(110) surface

The electronic structure of tetracene on Cu (110) surface has been studied by using ultraviolet photoemission spectroscopy (UPS). The emission features from the organic molecule are located from 1 to 10 eV below the Fermi level, and they shift in binding energy with increasing the coverage of the organic material. For the surface with multilayer of tetracene, six well-resolved features were found at 1.90, 3.40, 4.70, 5.95, 6.95, and 9.15 eV below the Fermi level, respectively. On the surface with a lower coverage of tetracene, angle-resolved UPS measurements suggest that the molecular plane is parallel to the substrate. Density functional theory calculation confirms the flat-lying adsorption mode and shows that the tetracene molecule prefers to be adsorbed on the long bridge site with its long axis in the [110] azimuth.     

The self-assembly of porphine molecules on NaCl pre-covered Cu(110) surface

The self-assembly of porphine molecules on NaCl pre-covered Cu(110) surface has been investigated at a single molecular level by scanning tunneling microscopy. The pre-grown NaCl stripe pattern has been partly interrupted due to the adsorption of porphine molecules at RT. Annealing the sample at 333 K and 423 K gradually promotes the formation of self-assembly network composed of porphine molecules and Cu atoms. Annealing at 473 K helps to convert this self-assembly structure into organometallic nanoribbon through C–Cu–C connecting.     

Structure versus electron effects in the growth mode of pentacene on metal-induced Si(111)-square root(3) x square root(3) surfaces

The growth of pentacene films on different metal (Ga, Pb, Bi, Ag) induced Si(111)-(square root(3) x square root(3))R30 degrees surfaces is investigated by scanning tunneling microscopy. On surfaces with high atomic surface roughness, such as GaSi-square root(3), beta-PbSi-square root(3), and alpha-BiSi-square root(3), pentacene forms an initial disordered wetting layer followed by the growth of crystalline thin films. The growth behavior is independent of the metallicity of the substrate surface in this regime. On the other hand, on surfaces with low adatom surface roughness, pentacene molecules form self-organized structures without forming a wetting layer. Moreover, the molecular orientation is critically dependent on the surface metallicity. This work reveals that the growth mode of pentacene on solid surfaces is determined by the combined effects of structural and electronic properties of the substrate.     

Structure and energetics of diphenylalanine self-assembling on Cu(110)

We investigate the dynamical features of the adsorption of diphenylalanine molecules on the Cu(110) surface and of their assembling into supramolecular structures by a combination of quantum and classical atomistic modeling with dynamic scanning tunneling microscopy and spectroscopic experiments. Our results reveal a self-assembling mechanism in which isolated adsorbed molecules change their conformation and adsorption mode as a consequence of their mutual interactions. In particular, the formation of zwitterions after proton transfer between initially neutral molecules is found to be the key event of the assembling process, which stabilizes the supramolecular structures. Because of the constraints on the intermolecular bonds exerted by the surface-molecule interactions, the assembly process is strictly stereoselective, and may suggest a general model for patterning and functionalization of bare metal surfaces with short chiral peptides.     

Observations of carbon–carbon coupling of 4,4'-dibromo-p-terphenyl on Cu(110) surface at molecular level

The carbon–carbon couplings of 4,4'-dibromo-p-terphenyl(DBTP) on Cu(110) surface have been investigated at a single molecular level by scanning tunneling microscopy. After annealing at 353 K, a mixture of parallel non-organometallic and organometallic intermediates of DBTP molecules along the[1–10] direction of the surface has been observed. Further annealing at 393 K causes one group of molecules to form oligomers with para-para and para-meta motifs via Ullmann reaction and the other group of molecules to synthesize oligomers with meta-meta motifs via direct carbon–carbon coupling reaction. Statistical results directly reveal that the occurrence of reaction type is strongly related to the initial binding configuration of DBTP molecules.     

Edge-on bonding of benzene molecules in the second adsorbed layer on Cu(110)

The bilayer of benzene on Cu(110) was studied with temperature-programmed desorption (TPD), time-of-flight electron stimulated desorption ion angular distribution (TOF-ESDIAD), and scanning tunneling microscopy (STM). TPD spectra show that three well-defined adsorption states exist. The alpha layer corresponds to the first layer containing flat-lying benzene molecules. As coverage increases, the beta layer forms on top of the alpha layer, and eventually, a multilayer, gamma, forms. TPD measurements show that the number of benzene molecules in the beta layer is equal to the number of benzene molecules in the alpha layer. ESDIAD measurements establish that the orientation of the benzene molecules in the beta layer is edge-on, with two C-H bonds directed toward the surface. STM images of the beta layer reveal closely spaced edge-on benzene molecules arranged in repeating hexagons, as well as loosely spaced benzene molecules with greater apparent height, which are also edge-on species. Correlation between the different measurements suggests a structural model for the benzene bilayer.     

Adsorption of L-lysine on Cu(110): a RAIRS study from UHV to the liquid phase

The adsorption of L-lysine on a Cu(110) surface has been investigated under UHV conditions from the sublimation of a crystalline phase. The adsorption was characterized by Fourier transform reflection absorption infrared spectroscopy (FT-RAIRS) during exposure and Auger electron spectroscopy (AES). At room temperature, the lysine molecules' adsorption geometry varies as a function of the exposure. At low coverage, the molecules are adsorbed via the oxygen atoms of the deprotonated carboxylate group and the nitrogen atom of the amino group. At high coverage, close to the monolayer, the molecules reorient to be anchored to the surface via one oxygen of a sideways-tilted carboxylate moiety. This first step is followed by the growth of multilayers of nonoriented molecules. In contrast, adsorption on an oxygen-modified copper surface leads to a rather disordered layer. The results are compared with the adsorption carried out on a polycrystalline copper surface after immersion in solutions of lysine at various pH values. The adsorption was monitored by polarization modulation infrared spectroscopy (PM-IRRAS). The chemistry of the adsorbed molecules is function of the starting chemical form of the lysine molecules imposed by the pH of the solution. The combination of the two techniques and various sets of adsorption conditions will give important insight into the adsorption of biomolecules on metal surfaces and the influence of water and surface oxygen.     

Alignment mechanism of a nematic liquid crystal on a pre-rubbed polyimide film with laser-induced periodic surface structure

A periodic surface structure was prepared on a pre-rubbed polyimide (PI) film surface with a pulsed UV laser polarized perpendicular to the rubbing direction. The experimental results demonstrate that the rubbing-induced molecular anisotropic orientation was relaxed by the pulsed laser irradiation, and the laser induced molecular orientation was perpendicular to the line of the laser-induced periodic structure. The dichroism of the anisotropy of molecular orientation increased with the increase of laser energy. Since the direction of the laser-induced molecular anisotropy was perpendicular to the surface groove direction of the pre-rubbed PI surface, the effects of surface microgroove and anisotropic molecular orientation of the PI chain on liquid crystal (LC) alignment can be distinguished from each other. LC alignment was investigated by evaluating the anchoring energy of the PI surface, which was calculated according to Berreman's theory using the twist angle of the LC in the cells. The experimental results demonstrate that the exact alignment direction of the LC molecules is determined by the relative strength of both factors.     

Fivefold Symmetry and 2D Crystallization: Self-Assembly of the Buckybowl Pentaindenocorannulene on a Cu(100) Surface

The modification of metal electrode surfaces with functional organic molecules is an important part of organic electronics. The interaction of the buckminsterfullerene fragment molecule pentaindenocorannulene with a Cu(100) surface is studied by scanning tunneling microscopy, dispersion-enabled density functional theory, and force field calculations. Experimental and theoretical methods suggest that two adjacent indeno groups become oriented parallel to the surface upon adsorption under mild distortion of the molecular frame. The binding mechanism between molecule and surface is dominated by strong electrostatic interaction owing to Pauli repulsion. Two-dimensional aggregation at room temperature leads to a single lattice structure in which all molecules are oriented unidirectionally. Their relative arrangement in the lattice suggests noncovalent intermolecular interaction through C−H⋅⋅⋅π bonding.     

Conformation Controls Mobility: 2H-Tetranaphthylporphyrins on Cu(111)

The adsorption behavior and the mobility of 2H-Tetranaphthylporphyrin (2HTNP) on Cu(111) was investigated by scanning tunneling microscopy (STM) at room temperature (RT). The molecules adsorb, like the structurally related 2HTPP, in the “inverted” structure with the naphthyl plane restricted to an orientation parallel to the Cu surface. The orientation of the four naphthyl groups yields altogether 16 possible conformations. Due to the existence of rotamer pairs, 10 different appearances are expected on the surface, and all of them are identified by STM at RT. Most interestingly, the orientation of the naphthyl groups significantly influences the diffusion behavior of the molecules on Cu(111). We identify three different groups of conformers, which are either immobile, medium or fast diffusing at RT. The mobility seems to decrease with increasing size of the footprint of the conformers on the surface.     

Alignment mechanism of a nematic liquid crystal on a pre-rubbed polyimide film with laser-induced periodic surface structure

A periodic surface structure was prepared on a pre-rubbed polyimide (PI) film surface with a pulsed UV laser polarized perpendicular to the rubbing direction. The experimental results demonstrate that the rubbing-induced molecular anisotropic orientation was relaxed by the pulsed laser irradiation, and the laser induced molecular orientation was perpendicular to the line of the laser-induced periodic structure. The dichroism of the anisotropy of molecular orientation increased with the increase of laser energy. Since the direction of the laser-induced molecular anisotropy was perpendicular to the surface groove direction of the pre-rubbed PI surface, the effects of surface microgroove and anisotropic molecular orientation of the PI chain on liquid crystal (LC) alignment can be distinguished from each other. LC alignment was investigated by evaluating the anchoring energy of the PI surface, which was calculated according to Berreman's theory using the twist angle of the LC in the cells. The experimental results demonstrate that the exact alignment direction of the LC molecules is determined by the relative strength of both factors.