Optical activity,solvation state,and conformations ofL-α-alanine in water-organic solvents

The solvation effect on the conformational equilibrium ofL--alanine in binary water-organic solvents (H₂O-acetonitrile, H₂O-DMF) was studied. This manifests itself in changes in the optical activity and CD intensity. Equilibrium constants for the substitution of water molecules by organic solvent molecules were determined.Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 6, pp. 1054–1057, June, 1993.     

Optical rotatory properties of synthetic polymers. I. Optical inversion of poly(propylene oxide)

(+)-1,2-Diethoxypropane, a model diether for the repeating unit of poly(propylene oxide), was prepared, and its behavior in solutions regarding optical rotatory dispersion and proton magnetic resonance was compared with those of the polymer. It was found that the model compound and the poly(propylene oxide) show essentially the same optical properties in solutions. By using the Brewster model of optical activity, it was concluded that the solvation of the polymer may well modify the polarizability of the optically active species to cause changes in the order of the polarizabilities of four atoms directly attached to the asymmetric carbon atom. The explanation is shown to be applicable also to some of related polymers.     

E.p.r. and spectroscopic studies of configurational changes in 1,4-diazacycloheptane copper(II) complexes

Summary E.p.r. and spectroscopic studies of bis(1,4-diazacycloheptane)copper(II) perchlorate, bromobis(1,4-diazacycloheptane)copper(II) perchlorate and dibromo-bis(1,4-diazacycloheptane)copper(II), were carried out in MeNO₂, DMSO and H₂O solutions as well as in the polycrystalline state. The ligation of bromide ion to bis(1,4-diazacycloheptane)copper(II) along thez-axis was investigated. The e.p.r. spectra are explained in terms of energy changes involving the electronic ground state and the lowest excited state as a function of ligation of nucleophiles to the metal atom along thez-axis. In the polycrystalline state, the weaker the apical interaction (square-planar species) the lower theg-value and the higher the copper(II) hyperfine coupling constant. In the liquid state, theg-values observed in non-coordinating solvents such as MeNO₂ are similar to those for the polycrystalline material suggesting structural similarity in the two states. The electronic absorption maxima for the three complexes in the liquid state shift to higher energy with an increase in tetragonal distortion around copper(II). In strongly coordinating solvents the e.p.r. spectra and absorption maxima are independent of the anion present. The increasing strength of solvation results in an increase in the wavelength of the optical transition and theg-values, and a decrease in the copper(II) hyperfine coupling constant. It appears that an increase in the basicity of the solvent has the same effect on thed-orbital energy levels and on the unpaired electron density on copper(II)_as does increasing the electronegativity of the substituents on the ligand.     

Study of preferential solvation of 2,6-diaminoanthraquinone in binary mixtures by absorption and fluorescence studies

The role of solute-solvent and solvent-solvent interaction on the preferential solvation characteristics of 2,6-diaminoanthraquinone (DAAQ) has been analysed by monitoring the optical absorption and fluorescence emission spectra. Binary mixtures consist of dimethylformamide (DMF)-ethanol (EtOH), DMF-dimelthylsulfoxide (DMSO), benzene (BZ)-DMF and acetonitrile (ACN)-DMF. The optical absorption spectra maximum and emission spectra maximum of DAAQ show the changes with varying the solvents and change in the composition in the case of binary mixtures. Non-ideal solvation characteristics are observed in all binary mixtures. It is found that at certain concentrations two mixed solvents interact to form a common structure with a nu(12) (wave number in cm(-1)) value not always intermediate (nu(1) and nu(2)) between the values of the solvents mixed. Synergistic effect is observed in the case of DMF-EtOH mixtures. The preferential solvation parameters local mole fraction X(2)(L), solvation index delta(S2), exchange constant K(12) are calculated in all binary mixtures expect in the case of DMF-BZ mixture and DMF-EtOH mixture in the ground state. We have also monitored excitation wavelength effect on the probe molecule in aprotic polar and protic polar solvents.     

Induction of Preferential Helical Screw Senses in Optically Inactive Polysilanes via Chiral Solvation

Two optically active solvents were synthesised, (S)‐(–)‐2‐methyl‐1‐propoxybutane and (S)‐(–)‐(2‐methylbutoxymethyl)benzene. The main chain conformations of poly(methylphenylsilane) and poly(hexylmethylsilane) in these solvents were investigated using optical UV‐visible and circular dichroism spectroscopy. It was observed that dissolving these inherently achiral polysilanes in optically active solvents induces the polymer chains to adopt preferred helical screw senses. This is the first example of induction of optical activity in conjugated polymers through chiral solvation.     

Solvatons. II. Aqueous dissociation of hydrides in the MINDOS approximation

A simple electrostatic model of solvation is presented which allows the interaction with solvent to be included systematically within semiempirical SCF calculations. Solvent effects are incorporated into the Hamiltonian for a solute molecule through a series of imaginary particles, solvatons, which represent the oriented solvent distribution around the solute.The proposed model is based on an algorithm for approximating the enthalpy of solvation of each atomic center from its charge in the molecular system and the experimental hydration enthalpies of its various ions. The calculated atomic solvation energy of one center is then modified to include the interaction with other charged atomic centers in the molecule. The method, developed here for the MINDO/3 approximation, has been applied to the calculation of the aqueous dissociation of a series of hydrides. In general, it leads to fairly accurate solvation enthalpies andpK _a values when applied to systems with fixed molecular geometries. A general discussion of the problems associated with the development of a solvation model within a semiempirical framework is also presented.     

Synthesis of Fluorobenzene and Benzimidazole Nucleic‐Acid Analogues and Their Influence on Stability of RNA Duplexes

Six different ribonucleoside phosphoramidites with fluorobenzenes or fluorobenzimidazoles as base analogues, one abasic site, and inosine were synthesized and incorporated into oligoribonucleotides. The oligomers were investigated by means of UV and CD spectroscopy to assess the contribution of H‐bonding, base stacking, and solvation to the stability of the RNA duplex. CD Spectra show that the incorporation of modified nucleosides does not lead to changes in the structure of RNA. The T_m differences determined are based on changes in base stacking and solvation. Individual contributions of base stacking and solvation of the modified nucleosides could be determined. In fluorobenzene⋅fluorobenzimidazole‐modified base pairs, a duplex‐stabilizing force was found that points to a weak F⋅⋅⋅H H‐bond.     

Solvation of transition metal complexes: thermochemical approaches

Conclusion and extensions We hope that this Review has made readers more aware of solvation of inorganic complexes, and of the importance of such knowledge in understanding their chemistryperhaps particularly their reactivity. The approach just set out for inorganic complexes should be of considerable value in the field or organometallic chemistry. In particular, informed use of solvation characteristics should help in optimising conditions for organometallic reactions and in homogeneous catalysis. Unfortunately, solvation data on reactants are too sparse (the subject index ofComprehensive Organometallic Chemistry contains justthree entries under solubility!) for serious examination of reactivity trends in terms of initial state and transition state contributions to be possible in almost all areas. Moreover, there are some fundamental problems over transfer parameters. Thus, a favourite electrochemical assumption is that the ferrocene/ferrocinium redox potential is independent of solvent. Yet, the dependence of rate constants on medium for outer-sphere electron transfer in the ferrocene/ferrocinium system can only be understood⁽⁶⁶⁾ in terms of specific solvation effects which are incompatible with the parallel solvation changes of these two substrates implicit in the redox potential assumption. The solvation of organometallic species should prove a most rewarding area for continued study, but it will be some time before the overall picture becomes as clear as in the more limited area of classical transition metal complexes considered in the present Review.     

Parallel variable selection of molecular dynamics clusters as a tool for calculation of spectroscopic properties

Clusters of a solute and a few solvent molecules obtained from molecular dynamics (MD) are a powerful tool to study solvation effects by advanced quantum chemical (QC) methods. For spectroscopic properties strongly dependent on the solvation, however, a large number of clusters are needed for a good convergence. In this work, a parallel variable selection (PVS) method is proposed that in some cases efficiently reduces the number of clusters needed for the averaging. The mass, charge, or atomic density MD distributions are used as a secondary variable to preselect the most probable cluster geometries used for averaging of solute spectral properties. When applied to nuclear magnetic resonance chemical shift of a model alcohol, the method allowed one to significantly reduce the total computational time, by a factor of 10. Even larger savings were achieved for the modeling of Raman and Raman optical activity spectra of (S)‐lactamide molecule dissolved in water. The results thus suggest that the PVS method can be generally used for simulations of spectroscopic properties of solvated molecules and makes multiscale MD/QC computations more affordable. © 2012 Wiley Periodicals, Inc.     

Solvent effects on Raman optical activity spectra calculated using the polarizable continuum model

The integral equation formulation of the polarizable continuum model (IEFPCM) has been extended to the calculation of solvent effects on vibrational Raman optical activity spectra. Gauge-origin independence of the differential scattering intensities of right and left circularly polarized light is ensured through the use of London atomic orbitals. Density functional theory (DFT) calculations have been carried out for bromochlorofluoromethane, methyloxirane, and epichlorhydrin. The results indicate that solvent effects on the ROA differential scattering intensities can be substantial, and vary in sign and magnitude for different vibrational modes. It is demonstrated that both direct and indirect effects are important in determining the total solvent effects on the ROA differential scattering intensities. Local field effects are shown to be in general small, whereas electronic nonequilibrium solvation has a profound effect on the calculated solvent effects compared to an equilibrium solvation model. For molecules with several conformations, the changes in the relative stability of the different conformers also lead to noticeable changes in the ROA spectra.     

Die spontane Spaltung von 3,3-Diäthyl-5-methylpiperidin-2,4-dion(Methyprylon) in die optischen Isomeren. Eine Rötgenstrukturanalyse eines isodimorphen Systems von Mischkristallen

The Spontaneous Resolution of the 3,3-Diethyl-5-methylpiperidine-2,4-dione (Methyprylon) into its Optical Isomers. An X-Ray Structure Analysis of an Isodimoophous System of Mixed Crystals Repeated recrystallizations from acetone of a racemic mixture of the title compound successively result in a spontaneous resolution into optical isomers [1]. In this process batches of mixed crystals of increased optical purity are formed [2]. This phenomena was investigated on a molecular basis using X-ray diffraction methods. The mixed crystals belong to the space group P2₁2₁2₁ and their diffraction patterns give no indication of major disorders. There is a linear relationship between the changes in unit cell parameters a and b and the optical rotation of the sample. The structures of the mixed crystals from four fractions belonging to two different crystalline modifications have been determined. The molecular shape is such that most of the atomic positions of the two enantiomers superimpose almost perfectly. Occupation factors determined for the asymmetric C- sites agree well with the optical activity of the crystals fraction.     

Effect of polyion conformation on dye binding. IV. Fluorescence of auramine O in relation to its binding to synthetic polyacids

The effect of polymer conformation, polymer concentration, and added salt concentration on the quantum yield ? of Auramine O (AuO) is discussed in connection with dialysis equilibrium data. The quantum yield per bound dye molecule (?/q) assumes different values which are related principally to solvation changes in the environment of the binding sites. Binding to globular compact a states results in high ?/q, whereas low ?/q (of the order of magnitude of ? of free AuO) are observed for the binding to expanded solvated b states. The quantum yield of bound AuO is therefore affected by the organic nature of the environment, but shows little or no relation to the amount of bound dye molecules.     

A Thermodynamic Study on the Binding of Human Serum Albumin with New Synthesized Anti Cancer Pd (II) Complex

The thermodynamics of the interaction between new synthesized anti-cancer drug (2,2′-bipyridin n-butyl dithiocarbamato Pd (II), ButPd), and HSA was investigated at pH=7 by isothermal titration calorimetry. A new solvation model was used to reproduce the enthalpies of HSA interaction by ButPd within a broad range of complex concentrations. The solvation parameters attained from the new model were attributed to the structural change and biological activity of HSA. The binding parameters for the interaction of ButPd and HSA indicated that the considerable conformational changes in HSA were not observed after being bound with ButPd. It was found that HSA has three identical and cooperative binding sites for ButPd.     

Calculation of solvation and binding free energy differences between VX-478 and its analogs by free energy perturbation and AMSOL methods

Summary VX-478 belongs to a novel class of HIV-1 protease inhibitors that are based on N,N-disubstituted benzene sulfonamides. Force field parameters for the N,N-dialkyl benzene sulfonamide moiety have been assembled from the literature and from our own ab initio calculations. These parameters were employed to calculate solvation and binding free energy differences between VX-478 and two analogs. The free energy perturbation method has been used to determine these differences using two approaches. In the first approach, intergroup interaction terms only were included in the calculation of free energies (as in most reports of free energy calculations using AMBER). In the second approach, both the inter- and intragroup interaction terms were included. The results obtained with the two approaches are in excellent agreement with each other and are also in close agreement with the experimental results. The solvation free energies of N,N-dimethyl benzene sulfonamide derivatives (truncated models of the inhibitors), calculated using continuum solvation (AMSOL) methods, are found to be in qualitative agreement with the experimental and free energy perturbation results. The binding and solvation free energy results are discussed in the context of structure-based drug design to show how physicochemical properties (for example aqueous solubilities and bioavailabilities) of these HIV-1 protease inhibitors were improved, while maintaining their inhibitory potency.     

Ab initio structural study of some substituted ibuprofen derivatives as possible anti‐inflammatory agents

The formation energies of a series of substituted derivatives in α‐position of ibuprofen (2‐p‐isobutyl‐phenyl‐propionic acid) are determined, at the ab initio level RHF/6‐311G** with full geometry optimization, in their neutral and anionic forms and in the gas phase and water solution to correlate their physical–chemical properties with their anti‐inflammatory activity. Conformational calculations on the acidic moiety were also performed on five of them. The ab initio methods foresee that all these molecules present two preferred conformations in which the substituting atom in α‐position is lying approximately in the aromatic ring plane, in contrast with the results obtained with semiempirical methods. In this article, the protonation energy in solution, the solvation energy, the HOMO energy of the neutral form, and the lipophilicity will be considered as possible factors of anti‐inflammatory activity. The protonation energy in solution, together with the lipophilicity, are verified to be good activity factors: The smaller the protonation energy and the lipophilicity, the larger the anti‐inflammatory activity. In contrast, the larger the solvation energy, the smaller the activity. © 2003 Wiley Periodicals, Inc. Int J Quantum Chem, 2004     

Proton magnetic resonance studies of compounds with bridgehead nitrogen. 38—solvent effects in the 1H NMR spectra of nitrogen heterocyclic systems containing a 1,3-arrangement of heteroatoms

Solvent effects on the ¹H NMR parameters of perhydro-oxazolo[3,4?a]pyridine, perhydropyrido[1,2?c]?[1,3]oxazine and perhydrothiazolo[3,4?a]pyridine derivatives are described. Particularly marked are changes in the proton-proton geminal coupling constants of the NCH₂O and NCH₂S methylene protons with solvent and these are attributed to reaction field and solvation effects rather than to changes in the position of conformational equilibria.     

Large Solvation Effect in the Optical Rotatory Dispersion of Norbornenone

The anomalously large chiroptical response of (1R,4R)‐norbornenone has been probed under complementary vapor‐phase and solution‐phase conditions to assess the putative roles of environmental perturbations. Measurements of the specific rotation for isolated (gas‐phase) molecules could not be reproduced quantitatively by comprehensive quantum‐chemical calculations based on density‐functional or coupled‐cluster levels of linear‐response theory, which suggests that higher‐order treatments may be needed to accurately predict such intrinsic behavior. A substantial, yet unexpected, dependence of the dispersive optical activity on the nature (phase) of the surrounding medium has been uncovered, with the venerable Lorentz local‐field correction reproducing solvent‐mediated trends in rotatory dispersion surprisingly well, whereas more modern polarizable continuum models for implicit solvation performed less satisfactorily.     

Extension of solution‐reaction‐surface description to examination of nonequilibrium solvation effect for microsolvated reaction

A microscopic method to examine a nonequilibrium solvation effect is reported. The solution reaction is simplified as a barrier‐crossing reaction within a solution reaction surface that corresponds to a two‐dimensional space determined by solute and solvent reactive coordinates. For this simplification, the motions within the space spanned by nonreactive coordinates are frozen. We derive three rate constant expressions: (1) in the nonadiabatic solvation limit, (2) in the equilibrium solvation limit, and (3) of the transition‐state theory. This method was applied to the examination of the contact‐ion‐pair formation of t‐BuCl in four waters. We found that the nonadiabatic solvation picture overestimates the nonequilibrium solvation effect. © 2000 John Wiley & Sons, Inc. Int J Quant Chem 77: 791–796, 2000     

One-dimensional model for water and aqueous solutions. II. Solvation of inert solutes in water

The two one-dimensional models introduced in Part I are used to study the thermodynamics of solvation of inert solutes in water. It is shown that the anomalously large Gibbs energy of solvation of inert solutes in water, on one hand, and the large negative entropy of solvation, on the other hand, arise from different molecular sources. While the primitive model can give rise to a large positive solvation Gibbs energy, it fails to show large negative entropy and enthalpy of solvation. It is remarkable that the primitive cluster model can show both the large positive Gibbs energy and enthalpy of solvation.     

Correlation and solvation effects. IV. A systematic analysis of the influence of cavity size and shape on solvation properties in the polarizable continuum model with electron correlation

From the standpoint of models that use a polarizable continuum to represent the solvent in studying the phenomenon of solvation, a systematic and detailed analysis is made of the influence of the cavity size and shape on calculated energies. The solute is represented by its ab initio wavefunction, and the electronic part of the solvation energy is calculated including terms that take into account electron correlation up to third order. The analysis shows the convenience of modeling the cavity according to considerations of homogeneity, which are based fundamentally on how the solute wavefunction is constructed, i.e., the basis set used.