Formation of intermolecular hydrogen bonds in light-sensitive crystals of C-2′-(o-oxyphenyl)vinyl-N-p-methylphenyl nitrone,C-2′-(2″-oxy-5″-bromophenyl)vinyl-N-p-methylphenyl nitrone,C-2′-(2″-oxy-5″-bromophenyl)-vinyl-N-phenyl nitrone,and C-2′-(o-oxyphenyl)vinyl-n-methyl nitrone

This paper studies the crystal structure of new substituted light-sensitive azomethine N-oxides (nitrones): C-2′-(o-oxyphenyl)vinyl-N-p-methylphenyl nitrone (1), C-2′-(2″-oxy-5″-bromophenyl)vinyl-N-p-methylphenyl nitrone (2), C-2′-(2″-oxy-5″-bromophenyl)-vinyl-N-phenyl nitrone (3), and C-2′-(o-oxyphenyl)vinyl-N-methyl nitrone (4). In contrast to the compounds studied earlier [1, 2], C-2′-(β-oxy-α-naphthyl)vinyl-N-p-methylphenyl nitrone (5), C-2′-(β-oxy-α-naphthyl)vinyl-N-phenyl nitrone (6), C-2′-(o-oxyphenyl) vinyl-N-phenyl nitrone (7), and C-2′-(o-oxyphenyl)vinyl-N-p-bromophenyl nitrone (8), the nitrones studies in this work have anti-rather than syn-orientations of the nitrone and hydroxyl groups. Due to this spatial arrangement of the proton-donating hydroxyl and proton-accepting nitrone groups, molecules in crystals 1–4 are bonded by intermolecular hydrogen bonds (IHB) to form chains but not centrosymmetric dimeric associates (CDA). Two types of chain arrangements were revealed: “head-to-tail” and “head-to-tail, tail-to-head”. It is shown that the introduction of an alkyl substituent instead of an aryl one at the nitrogen atom of the nitrone group in 4 leads to a change in the geometry of the IHB in the H-associate. It is proven that the hydroxyl proton can undergo an intermolecular O→O transfer in the chain of hydrogen bonds in crystals 1–4, which can give rise to photochemical transformations in these crystals. Institute of Chemical Physics in Chernogolovka, Russian Academy of Sciences. Translated fromZhurnal Strukturnoi Khimii, Vol. 37, No. 2, pp. 349–362, March–April, 1996. Translated by L. Smolina     

Synthesis of oxepane ring containing monocyclic, conformationally restricted bicyclic and spirocyclic nucleosides from D-glucose: a cycloaddition approach

Carbohydrate-derived substrates having (i) C-5 nitrone and C-3-O-allyl, (ii) C-4 vinyl and a C-3-O-tethered nitrone, and (iii) C-5 nitrone and C-4-allyloxymethyl generated tetracyclic isoxazolidinooxepane/-pyran ring systems upon intramolecular nitrone cycloaddition reactions. Deprotection of the 1,2-acetonides of these derivatives followed by introduction of uracil base via Vorbrüggen reaction condition and cleavage of the isooxazolidine rings as well as of benzyl groups by transfer hydrogenolysis yielded an oxepane ring containing bicyclic and spirocyclic nucleosides. The corresponding oxepane based nucleoside analogues were prepared by cleavage of isoxazolidine and furanose rings, coupling of the generated amino functionalities with 5-amino-4,6-dichloropyrimidine, cyclization to purine rings, and finally aminolysis.     

Influence of the side chain protecting group on the stereoselectivity of the 1,3-dipolar cycloaddition of d-talo-configured nitrones

Two new five-membered cyclic d-talo-configured nitrones were synthesized from d-mannose, and examined in 1,3-dipolar cycloadditions with vinyl acetate and vinylene carbonate. The stereoselectivity of the cycloadditions depends greatly on the protecting group of the vicinal diol attached to the nitrone C-5 carbon atom. Methyl protection resulted in limited syn/anti-selectivity, giving mixtures of the two isomeric exo-syn and exo-anti isoxazolidines in comparable amounts. On the other hand, the cyclohexylidene-substituted nitrone reacted more selectively in favour of the syn isomer. The difference in the diastereoselectivity was attributed to the specific spatial orientation of the nitrone C-5 substituent.     

Stereoselective Synthesis of Fluorinated Galactopyranosides as Potential Molecular Probes for Galactophilic Proteins: Assessment of Monofluorogalactoside–LecA Interactions

The replacement of hydroxyl groups by fluorine atoms on hexopyranoside scaffolds may allow access to invaluable tools for studying various biochemical processes. As part of ongoing activities toward the preparation of fluorinated carbohydrates, a systematic investigation involving the synthesis and biological evaluation of a series of mono- and polyfluorinated galactopyranosides is described. Various monofluorogalactopyranosides, a trifluorinated, and a tetrafluorinated galactopyranoside have been prepared using a Chiron approach. Given the scarcity of these compounds in the literature, in addition to their synthesis, their biological profiles were evaluated. Firstly, the fluorinated compounds were investigated as antiproliferative agents using normal human and mouse cells in comparison with cancerous cells. Most of the fluorinated compounds showed no antiproliferative activity. Secondly, these carbohydrate probes were used as potential inhibitors of galactophilic lectins. The first transverse relaxation-optimized spectroscopy (TROSY) NMR experiments were performed on these interactions, examining chemical shift perturbations of the backbone resonances of LecA, a virulence factor from Pseudomonas aeruginosa. Moreover, taking advantage of the fluorine atom, the ¹⁹F NMR resonances of the monofluorogalactopyranosides were directly monitored in the presence and absence of LecA to assess ligand binding. Lastly, these results were corroborated with the binding potencies of the monofluorinated galactopyranoside derivatives by isothermal titration calorimetry experiments. Analogues with fluorine atoms at C-3 and C-4 showed weaker affinities with LecA as compared to those with the fluorine atom at C-2 or C-6. This research has focused on the chemical synthesis of “drug-like” low-molecular-weight inhibitors that circumvent drawbacks typically associated with natural oligosaccharides.     

Stereoselectivity of 1,3-dipolar cycloadditions of l-valine-derived nitrones with methyl acrylate

Chiral nitrones derived from l-valine react with methyl acrylate to afford the corresponding diastereomeric 3,5-disubstituted isoxazolidines. The dibenzylsubstituted nitrone gave also 3,4-disubstituted isoxazolidine in 4% yield, additionally. The stereoselectivity was dependent on the steric hindrance of the nitrone and reaction conditions. High pressure decreased the reaction time of the cycloadditions. The major products were found to have the C-3/C-6 erythro and C-3/C-5 trans relative configuration. The major cycloadduct undergoes N-O cleavage and deprotection to a chiral diaminodiol derivative.     

Efficient Regioselective Synthesis of Mono-2-O-Sulfonyl-cyclodextrins by the Combination of Sulfonyl Imidazole and Molecular Sieves

Abstract

Cyclodextrins are cyclic oligosaccharides consisting of six or more α-1,4-linked D-glucopyranose units, which possess primary hydroxyl groups at the C-6 positions and secondary hydroxyl groups at the C-2 and C-3 positions. Because cyclodextrins have a hydrophobic and optically active interior, they have been utilized as transporters of hydrophobic molecules and small molecular mimics of enzymes. The chemical modification of cyclodextrins has been investigated in order to improve these characteristics. Sulfonations of the primary or secondary hydroxyl groups of cyclodextrin have been applied for further functionalization of cyclodextrin, and several methods for regioselective sulfonations have been developed. Among these strategies, selective monotosylation of the C-6 hydroxyl group is done relatively easily by reaction of α or β-cyclodextrin and p-toluenesulfonyl chloride in pyridine^1,2 or in alkaline aqueous solution.^3,4 However, sulfonation of the secondary hydroxyl groups is more difficult and new sulfonation methods must be developed to provide precursors for cyclodextrin analogues such as amino and sulfide analogues. Several strategies for the sulfonation of one C-2 hydroxyl group have been reported. However, because reaction conditions can require specific sulfonation reagent,⁵ alkaline condition,^3-7 strict anhydrous conditions,^8,9 or use of protected C-6 hydroxyl groups,^10,11 the methodology is not convenient to employ.     

Intramolecular nitrone cycloaddition reaction on carbohydrate-based precursors: application in the synthesis of spironucleosides and spirobisnucleosides

A simple synthesis of chiral spironucleosides and spirobisnucleosides is described. Intramolecular 1,3-dipolar nitrone cycloaddition reaction of d-glucose-derived precursors having olefin at C-3 and nitrone at C-5, C-1, or C-2 (in nor-series) furnished bisisoxazolidinospirocycles 4-7, 11, and 12 in good yields. Reductive ring opening of the isoxazolidine moieties in 4-6 followed by construction of a nucleoside base upon the generated amino groups smoothly yielded spirobisnucleosides 17 and 18 and spironucleosides 20 and 21.     

Asymmetric synthesis of epicylindrospermopsin via intramolecular nitrone cycloaddition. Assignment of absolute configuration

A synthesis of (-)-epicylindrospermopsin (2) was completed that establishes its absolute configuration and corroborates the corrected structural assignment previously made to this toxin by Weinreb et al. The hydroxylamine 3, prepared from 4-bromobenzyloxyacetaldehyde, was condensed with aldehyde 4, obtained in nine steps from (R)-methionine, to give nitrone 16. Intramolecular cycloaddition of 16 proceeded stereoselectively to yield the oxazabicyclo[2.2.1]heptane 17, which after reduction and deprotection afforded piperidine 18. The latter was transformed via cyclic urea 19 to the inverted C12 alcohol 20, and the derived azide 22 was cyclized to produce the guanidine moiety of 25. Final sulfation of the C12 hydroxyl group furnished (-)-2.     

Diastereoselective intermolecular radical addition to nitrones

The intermolecular radical addition to chiral nitrones 2, 4, 5, and 16 was studied. The isopropyl radical addition to Oppolzer's camphorsultam derivative 2 of glyoxylic nitrone proceeded with excellent diastereoselectivity to give the desired isopropylated product 3a accompanied by the diisopropylated product 3b. A high degree of stereocontrol in the reaction of cyclic nitrone 4 was achieved. The ethyl radical addition to nitrone 4 with triethylborane afforded the desired ethylated product 9a accompanied by the diethylated product 10a and the ethylated nitrone 11a. To evaluate the utility of cyclic nitrone 4, several alkyl radicals were employed in the addition reaction, which afforded the alkylated products 9b-d with excellent diastereoselectivities. In the presence of Mg(ClO(4))(2), the ethyl radical addition to BIGN 16 afforded selectively syn isomers. In contrast, the alkyl radical addition to 16 took place even in the absence of Lewis acid to give anti isomers.     

Addressing the Structural Complexity of Fluorinated Glucose Analogues: Insight into Lipophilicities and Solvation Effects

In this work, we synthesized all mono-, di-, and trifluorinated glucopyranose analogues at positions C-2, C-3, C-4, and C-6. This systematic investigation allowed us to perform direct comparison of ¹⁹F resonances of fluorinated glucose analogues and also to determine their lipophilicities. Compounds with a fluorine atom at C-6 are usually the most hydrophilic, whereas those with vicinal polyfluorinated motifs are the most lipophilic. Finally, the solvation energies of fluorinated glucose analogues were assessed for the first time by using density functional theory. This method allowed the log P prediction of fluoroglucose analogues, which was comparable to the C log P values obtained from various web-based programs.     

A concise stereoselective synthesis of (-)-erycibelline

(-)-Erycibelline, the dihydroxynortropane alkaloid isolated from Erycibe elliptilimba Merr. et Chun., was synthesized using a cyclic nitrone as advanced intermediate, wherein the key step was the SmI(2)-induced intramolecular reductive coupling of cyclic nitrone with aldehyde which resulted in good yield and stereoselectivity.     

[3+2] Cycloaddition reactions: a simple entry to the 1-aza-2-oxo-3,4,5,6-tetrahydroxybicyclo[3.3.0]octane ring system

The [3+2] intramolecular nitrone cycloaddition (INC) reaction on appropriately designed olefinic nitrones derived from d-glucose, having the nitrone at C-1 and α,β-unsaturated ester functionalities at C-5 of the sugar backbone, afforded the isoxazolidine fused carbocycles 11-13, which were subsequently transformed into the chiral, tetrahydroxylated cis-azabicyclo[3.3.0]octanones 14-18 in good yields.     

Syntheses of fluorine-containing mucin core 2/core 6 structures using novel fluorinated glucosaminyl donors

Syntheses of fluorinated mucin core 6 disaccharides and core 2 trisaccharides modified at the C-3 or C-4 position of the pertinent glucosamine residue required for mechanistic study of glycosyltransferases and sulfotransferases involved in the biosynthesis of O-glycans are reported. Novel fluorinated glucosaminyl donors were synthesized from 2-naphthylmethyl β-d-N-acetylglucosamine (β-O-NAP-GlcNAc) via double inversion of the C-3 or C-4 configuration. A one-step β-alkylation of GlcNAc was reported for the first time to afford β-O-NAP-GlcNAc in high yield, which constitutes the cornerstone of the synthetic strategy based on NAP-glycosides in oligosaccharides synthesis.     

13C-NMR spectral studies on the distribution of substituents in some cellulose derivatives

¹³C-NMR spectra of trityl cellulose (Tr-Cell), tosyl cellulose (Ts-Cell), cellulose S-methyl xanthate (Cell-M-Xan), and cellulose formate (CF) in dimethylsulfoxide-d₆ were analyzed at 50.4 MHz. It was found that the distribution of substituents in the anhydroglucose units of these cellulose derivatives can be estimated from their ring carbon spectra. The results showed that (i) in Tr-Cell having degree of substitution (DS) lower than 1, the hydroxyl groups at C-6 carbon position are selectively tritylated, (ii) in the case of Ts-Cell, the difference in the relative DS value among three different types of hydroxyl groups is not large, although the relative reactivities of hydroxyl groups toward tosylation decrease in the order C-6 > C-2 > C-3, (iii) in Cell-M-Xan, the hydroxyl groups at C-3 carbon position are mainly substituted, and (iv) the ease of formylation is C-6 > C-2 > C-3. The 100.8 MHz ¹³C-NMR spectra of O-methyl cellulose (MC) revealed that the reactivity order in commercial MC prepared from alkali cellulose is C-6 ? C-2 > C-3. Concerning MC, its water solubility was also discussed in terms of the distribution of substituents along the cellulose chain.     

Synthesis and properties of azoles and their derivatives XXXVIII. [2+3]-cycloaddition of C,C,N-triphenyl and Z-C,N-diphenyl nitrone ton-dec-1-ene in the light of semiempirical am-1 calculations

The activation parameters of the [2+3]-cycloaddition of C,C,N-triphenyl nitrone and Z-C,N-diphenyl nitrone to n-dec-1-ene were calculated by the AM-1 method. It was shown that the paths leading to the respective isoxazolidines containing an octyl group at the C-5 position of the heterocyclic ring are preferred.For communication XXXVII, see [1].Institute of Organic Chemistry and Technology, Technical University, Krakow 31-155, Poland. Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 9, pp. 1204–1208, September, 1998.     

Synthesis of chiral oxepanes and pyrans by 3-O-allylcarbohydrate nitrone cycloaddition (3-OACNC)

3-O-Allylcarbohydrate nitrone cycloaddition (3-OACNC) furnished pyran and oxepane derivatives from 3-O-allyl hexose N-benzyl nitrones and 3-O-allyl furanoside-5-aldehyde N-benzyl/methyl nitrones. The regioselectivity of 3-OACNC was found to depend on the following factors (a) the structural nature of the nitrone (b) substitution and stereochemistry at 3-C of the carbohydrate backbone (c) substitution at the terminus of the O-allyl moiety. Oxepanes or pyrans obtained from a particular set of a hexose nitrone and the corresponding furanoside nitrone were converted to enantiomeric cyclic ethers through degradation. A mixture of an oxepane and a pyran was formed in the intramolecular oxime olefin cycloaddition (IOOC) of a 3-O-allylcarbohydrate derived oxime.     

Regio- and chemoselective manipulation under mild conditions on glucosamine derivatives for oligosaccharide synthesis and its application toward N-acetyl-d-lactosamine and Lewis X trisaccharide

Special emphasis on regio- and chemoselective manipulation on a new glucosamine scaffold was laid, toward the short-step and efficient synthetic routes for oligosaccharides. First, the blocking of two hydroxyl groups at C-1 and C-6 positions of N-protected glucosamine at once by silylation followed by an oxazolidinone formation between C-3 hydroxyl and C-2 amino groups were established, to lead an expeditious way for a glycosyl acceptor for lactosamine synthesis. Second, without any effect on acetyl protective groups in the same molecule, the ring-opening of oxazolidinone and hydrolysis of resulting carbonate under mild conditions allowed the C-3 hydroxyl group to be free, which is indispensable for further extension to oligosaccharides, such as a LeX trisaccharide.     

Synthesis and Kinetic Evaluation of Inhibitors of the Phosphatidylinositol-Specific Phospholipase C from Bacillus cereus

Substrate analogues of phosphatidylinositol (1) were synthesized and evaluated as potential inhibitors of the bacterial phosphatidylinositol-specific phospholipase C (PI-PLC) from Bacillus cereus. The chiral analogues of the water-soluble phospholipid substrate 5 were designed to probe the effects of varying the inositol C-2 hydroxyl group, which is generally believed to serve as the nucleophile in the first step of the hydrolysis of phosphatidylinositols by PI-PLC. In the analogues 6-9, the C-2 hydroxyl group on the inositol ring of the phosphatidylinositol derivatives was rationally altered in several ways. Inversion of the stereochemistry at C-2 of the inositol ring led to the scyllo derivative 6. The inositol C-2 hydroxy group was replaced with inversion by a fluorine to produce the scyllo-fluoro inositol 7 and with a hydrogen atom to furnish the 2-deoxy compound 8. The C-2 hydroxyl group was O-methylated to prepare the methoxy derivative 9. The natural inositol configuration at C-2 was retained in the nonhydrolyzable phosphorodithioate analogue 10. The inhibition of PI-PLC by each of these analogues was then analyzed in a continuous assay using D-myo-inositol 1-(4-nitrophenyl phosphate) (25) as a chromogenic substrate. The kinetic parameters for each of these phosphatidylinositol derivatives were determined, and each was found to be a competitive inhibitor with K(i)'s as follows: 6, 0.2 mM; 10, 0.6 mM; 8, 2.6 mM; 9, 6.6 mM; and 7, 8.8 mM. This study further establishes that the hydrolysis of phosphatidylinositol analogues by bacterial PI-PLC requires not only the presence of a C-2 hydroxyl group on the inositol ring, but the stereochemistry at this position must also correspond to the natural myo-configuration. For future inhibitor design, it is perhaps noteworthy that the best inhibitors 6 and 10 each possess a hydroxyl group at the C-2 position. Several of the inhibitors identified in this study are now being used to obtain crystallographic information for an enzyme-inhibitor complex to gain further insights regarding the mechanism of hydrolysis of phosphatidylinositides by this PI-PLC.     

Synthesis and glycosidase inhibition of C-7 modified casuarine derivatives

A series of C-7 modified analogues of casuarine have been synthesized from sugar-derived nitrone and assayed against various glycosidases. Introduction of C-7 aminomethyl or amide group led to sharp decrease of the inhibitory activities.     

Intramolecular hydrogen bonding (P=O--H) stabilizes the chair conformation of six-membered ring phosphates

[reaction: see text] Six-membered cyclic phosphates (2-phenoxy-2-oxo-1,3,2-dioxaphosphorinanes) bearing an internal protected or unprotected hydroxyl group were designed, synthesized, and studied by NMR and computational methods. Selective opening of O-isopropylidene-protected 1,2-diols at the primary site was achieved with either triethylsilane or trimethylallylsilane in the presence of BF3.OEt2. Applied to 5,6-O-isopropylidenepentofuranosides, this reaction gave rise to the formation of the corresponding 1,3-diol precursors for the six-membered ring phosphates containing an O-isopropyl or O-1,1-dimethyl-3-butenyl functional group at C-6. The O-1,1-dimethyl-3-butenyl protecting group was efficiently removed after the phosphorylation with BF3.OEt2, and the six-membered cyclic phosphates containing free hydroxyl groups were obtained. A cyclic phosphate with a free hydroxyl group oriented cis to the phosphoryl group shows a vicinal coupling constant 3J(HP) that is in accordance with the chair conformation. This is due to the formation of a seven-membered intramolecular hydrogen-bonded ring structure that stabilizes the chair conformation. Thus, the strong tendency of the phenoxy group to be in an axial position is diminished by the internal hydrogen bonding interaction. Computational studies provided strong support for the experimental observation.