A Förster Resonance Energy Transfer Ratiometric Probe Based on Quantum Dot-Cresyl Violet for Imaging Hydrogen Sulfide in Living Cells

Hydrogen sulfide (H₂S) has been confirmed as a significant endogenous gaseous signaling molecule involved in various physiological processes. In order to monitor H₂S in living cells, a Forster resonance energy transfer (FRET) ratiometric probe based on quantum dot-cresyl violet was developed. In this work, the quantum dot nanospheres via a facile ultrasonication emulsion strategy, and the mixture chloroform solution containing hydrophobic quantum dots and COOH-functionalized amphiphilic polymer were successfully transferred into the oil-in-water micelle. The negatively charged quantum dot nanospheres with quantum dots embedded in the polymer matrixes were successfully fabricated after the evaporation of chloroform. And then, these quantum dot nanospheres were condensed with positively charged cresyl violet-azide (CV-N₃) via electrostatic interaction to obtain the complexes (QDS-N₃). The as-prepared QDS-N₃ complexes were monodispersed nanospheres with an average diameter of about 120 nm. These complexes were taken up by the cell through endocytosis, and they were still stable even in wide pH range. In addition, the QDS-N₃ complexes exhibited no cellular toxicity which was verified by MTT assay. In this ratiometric probe, CV-N₃ as a FRET acceptor was conjugated to quantum dot nanospheres. The quantum dots emitted at 591 nm and served as the FRET donor; once the aryl azide on the CV-N₃ was reduced by H₂S to aniline, the probe emitted at 620 nm. The ratiometric probe allowed the elimination of interference of excitation intensity, intracellular environment and other factors. Furthermore, this method also offered a general protocol for preparing nanosensors for monitoring various small molecular in living cells.     

Plasmon Effect of Ag Nanoparticles on Förster Resonance Energy Transfer in a Series of Cationic Polymethine Dyes

Theoretical and Experimental Chemistry - Enhanced Förster resonance energy transfer was found for donor–acceptor pairs of cationic dyes in the presences of silver nanoparticles (NPs) in...     

How Quantum Dots Aggregation Enhances Förster Resonant Energy Transfer

As luminescent quantum dots (QDs) are known to aggregate themselves through their chemical activation by carbodiimide chemistry and their functionalization with biotin molecules, we investigate both effects on the fluorescence properties of CdTe QDs and their impact on Förster Resonant Energy Transfer (FRET) occurring with fluorescent streptavidin molecules (FA). First, the QDs fluorescence spectrum undergoes significant changes during the activation step which are explained thanks to an original analytical model based on QDs intra-aggregate screening and inter-QDs FRET. We also highlight the strong influence of biotin in solution on FRET efficiency, and define the experimental conditions maximizing the FRET. Finally, a free-QD-based system and an aggregated-QD-based system are studied in order to compare their detection threshold. The results show a minimum concentration limit of 80 nM in FA for the former while it is equal to 5 nM for the latter, favouring monitored aggregation in the design of QDs-based biosensors.     

Modulation of Excited-State Proton-Transfer Dynamics inside the Nanocavity of Microheterogeneous Systems: Microenvironment-Sensitive Förster Energy Transfer to Riboflavin

The excited-state proton-transfer efficiency of a tetraarylpyrene derivative, 1,3,6,8-tetrakis(4-hydroxy-2,6-dimethylphenyl)pyrene (TDMPP), was investigated thoroughly in the presence of various surfactant assemblies, such as micelles and vesicles. The confined microheterogeneous environments can significantly retard the extent of the excited-state proton-transfer process, resulting in a distinguishable optical signal compared to that in the bulk medium. Physical characteristics of the surfactant assemblies, such as order, interfacial hydration, and surface charge, influence the proton transfer process and allow multiparametric sensing. A higher degree of interfacial hydration facilitates the proton-transfer process, while the positively charged head groups of the surfactants specifically stabilize the anionic form of the probe (TDMPP−O*). Furthermore, Forster energy transfer from the probe to riboflavin was studied in a phospholipid membrane, wherein the relative ratio of the neutral versus anionic forms (TDMPP-OH/TDMPP−O*) was found to influence the extent of energy transfer. Overall, we demonstrate how an ultrafast photophysical process, that is, the excited-state proton transfer, can be influenced by the microenvironment.     

Energy transfer dynamics in Re(I)-based polynuclear assemblies: a quantitative application of Förster theory

The synthesis, structure, and photophysical properties of a new family of tetranuclear FeRe 3 chromophore-quencher complexes having the general form [Fe(pyacac) 3(Re(bpy')(CO) 3) 3](OTf) 3 (where pyacac = 3-(4-pyridyl)-acetylacetonate and bpy' is 4,4',5,5'-tetramethyl-2,2'-bipyridine (tmb, 1), 2,2'-bipyridine (bpy, 2), and 4,4'-diethylester-2,2'-bipyridine (deeb, 3)) are reported. Time-resolved emission data acquired in room-temperature CH 2Cl 2 solutions exhibited single exponential decay kinetics with observed lifetimes of 450 +/- 30 ps, 755 +/- 40 ps, and 2.5 +/- 0.1 ns for complexes 1, 2, and 3, respectively. The emission in each case is assigned to the decay of the Re (I)-based (3)MLCT excited state; the lifetimes are all significantly less than the corresponding AlRe 3 analogues (2250 +/- 100 ns, 560 +/- 30 ns, and 235 +/- 20 ns for 4, 5, and 6, respectively), which were also prepared and characterized. Electron transfer is found to be thermodynamically unfavorable for all three Re (I)-containing systems: this fact coupled with the absence of optical signatures for the expected charge-separated photoproducts in the time-resolved differential absorption spectra and favorable spectral overlap between the donor emission and the acceptor absorption profiles implicates dipolar energy transfer from the Re (I)-based excited state to the high-spin Fe (III) core as the dominant quenching pathway in these compounds. Details obtained from the X-ray structural data of complex 2 allowed for a quantitative application of Forster energy transfer theory by systematically calculating the separation and spatial orientation of the donor and acceptor transition moment dipoles. Deviations between the calculated and observed rate constants for energy transfer were less that a factor of 3 for all three complexes. This uncommonly high degree of precision testifies to both the appropriateness of the Forster model as applied to these systems, as well as the accuracy that can be achieved in quantifying energy transfer rates if relative dipole orientations can be accounted for explicitly.     

Exciton migration in rigid-rod conjugated polymers: an improved Förster model

The dynamics of interchain and intrachain excitation energy transfer taking place in a polyindenofluorene endcapped with perylene derivatives is explored by means of ultrafast spectroscopy combined with correlated quantum-chemical calculations. The experimental data indicate faster exciton migration in films with respect to solution as a result of the emergence of efficient channels involving hopping between chains in close contact. These findings are supported by theoretical simulations based on an improved Forster model. Within this model, the rates are expressed according to the Fermi golden rule on the basis of (i) electronic couplings that take account of the detailed shape of the excited-state wave functions (through the use of a multicentric monopole expansion) and (ii) spectral overlap factors computed from the simulated acceptor absorption and donor emission spectra with explicit coupling to vibrations (considered within a displaced harmonic oscillator model); inhomogeneity is taken into account by assuming a distribution of chromophores with different conjugation lengths. The calculations predict faster intermolecular energy transfer as a result of larger electronic matrix elements and suggest a two-step mechanism for intrachain energy transfer with exciton hopping along the polymer backbone as the limiting step. Injecting the calculated hopping rates into a set of master equations allows the modeling of the dynamics of exciton transport along the polyindenofluorene chains and yields ensemble-averaged energy-transfer rates in good agreement with experiment.     

Characterization of the Biological Activities of Human Luteinizing Hormone and Chorionic Gonadotropin by a Förster Resonance Energy Transfer-Based Biosensor Assay

A Förster resonance energy transfer (FRET)-based cyclic adenosine monophosphate (cAMP) biosensor was used to study the activation of the mutual receptor for human luteinizing hormone (hLH) and human chorionic gonadotropin (hCG) in living cells stably expressing the shared recombinant receptor for these hormones. This work demonstrates the applicability of a cAMP biosensor-based assay for the study of receptor-mediated signal transduction and the characterization of the biological activities of gonadotropins and their isoforms. The importance of this approach lies in the fact that only the active portion of the total hormone concentration elicits a measurable response. No significant differences in early receptor activation profiles were detected for either of the tested recombinant gonadotropins. However, the subsequent physiological regulations mediated by these hormones may be more complex. The ability to detect biologically active hormones at low concentrations forms the basis for the future quantification of human chorionic gonadotropin in embryo culture medium and the use of this information for unbiased embryo selection during in vitro fertilization. Herein, a novel method for describing the biological activities of gonadotropins in various samples and preparations is reported.     

Förster resonance energy transfer in nanoclusters of InP@ZnS colloidal quantum dots with dodecylamine ligand shells

Förster resonance energy transfer between InP@ZnS hydrophobic colloidal quantum dots of two different sizes has been studied in the closely packed nanoclusters formed spontaneously in an organic solvent upon the addition of a precipitating solvent. The quantum dots had a core@shell structure and were stabilized by dodecylamine ligands.     

Beyond the Förster formulation for resonance energy transfer: the role of dark states

Resonance Energy Transfer (RET) is investigated in pairs of charge-transfer (CT) chromophores. CT chromophores are an interesting class of π conjugated chromophores decorated with one or more electron-donor and acceptor groups in polar (D-π-A), quadrupolar (D-π-A-π-D or A-π-D-π-A) or octupolar (D(-π-A)(3) or A(-π-D)(3)) structures. Essential-state models accurately describe low-energy linear and nonlinear spectra of CT-chromophores and proved very useful to describe spectroscopic effects of electrostatic interchromophore interactions in multichromophoric assemblies. Here we apply the same approach to describe RET between CT-chromophores. The results are quantitatively validated by an extensive comparison with time-dependent density functional theory (TDDFT) calculations, confirming that essential-state models offer a simple and reliable approach for the calculation of electrostatic interchromophore interactions. This is an important result since it sets the basis for more refined treatments of RET: essential-state models are in fact easily extended to account for molecular vibrations in truly non-adiabatic approaches and to account for inhomogeneous broadening effects due to polar solvation. Optically forbidden (dark) states of quadrupolar and octupolar chromophores offer an interesting opportunity to verify the reliability of the dipolar approximation. In striking contrast with the dipolar approximation that strictly forbids RET towards or from dark states, our results demonstrate that dark states can take an active role in RET with interaction energies that, depending on the relative orientation of the chromophores, can be even larger than those relevant to allowed states. Essential-state models, whose predictions are quantitatively confirmed by TDDFT results, allow us to relate RET interaction energies towards allowed and dark states to the supramolecular symmetry of the RET-pair, offering reliable design strategies to optimize RET-interactions.     

Unidirectional Sidechain Engineering to Construct Dual-Asymmetric Acceptors for 19.23 % Efficiency Organic Solar Cells with Low Energy Loss and Efficient Charge Transfer

Achieving both high open-circuit voltage (V_oc) and short-circuit current density (J_sc) to boost power-conversion efficiency (PCE) is a major challenge for organic solar cells (OSCs), wherein high energy loss (E_loss) and inefficient charge transfer usually take place. Here, three new Y-series acceptors of mono-asymmetric asy-YC11 and dual-asymmetric bi-asy-YC9 and bi-asy-YC12 are developed. They share the same asymmetric D₁AD₂ (D₁=thieno[3,2-b]thiophene and D₂=selenopheno[3,2-b]thiophene) fused-core but have different unidirectional sidechain on D₁ side, allowing fine-tuned molecular properties, such as intermolecular interaction, packing pattern, and crystallinity. Among the binary blends, the PM6 : bi-asy-YC12 one has better morphology with appropriate phase separation and higher order packing than the PM6 : asy-YC9 and PM6 : bi-asy-YC11 ones. Therefore, the PM6 : bi-asy-YC12-based OSCs offer a higher PCE of 17.16 % with both high V_oc and J_sc, due to the reduced E_loss and efficient charge transfer properties. Inspired by the high V_oc and strong NIR-absorption, bi-asy-YC12 is introduced into efficient binary PM6 : L8-BO to construct ternary OSCs. Thanks to the broadened absorption, optimized morphology, and furtherly minimized E_loss, the PM6 : L8-BO : bi-asy-YC12-based OSCs achieve a champion PCE of 19.23 %, which is one of the highest efficiencies among these annealing-free devices. Our developed unidirectional sidechain engineering for constructing bi-asymmetric Y-series acceptors provides an approach to boost PCE of OSCs.     

Förster energy transfer in cholesteric mixtures: a new type of phototunable fluorescent material

A new approach to the creation of cholesteric glass‐forming materials with photovariable fluorescent properties is suggested. This approach is based on Förster type energy transfer from a photochemically active donor to a highly fluorescent acceptor. For this purpose, a cholesteric mixture containing two fluorescent dopants based on anthracene (Dianthr) and stilbene (DCM) was prepared and studied. The absorbance peak of DCM molecules overlaps the emission peak of Dianthr. The possibility of using energy transfer in cholesteric mixtures containing a photoactive energy donor capable of photobleaching is demonstrated. It is shown that UV irradiation of planarly oriented films of the mixture leads to photodimerization of the Dianthr dopant. This photoreaction results in a significant decrease in the emission intensity of the DCM dopant. In all cases the emitted light is strongly circularly polarized, and the degree of polarization does not change during photoreaction. Such types of photo‐patternable glass‐forming cholesteric materials combining fluorescent properties, the possibility of energy transfer between two fluorescent dyes and a photoactivity of one fluorescent component, provide new opportunities for optical data recording and storage.     

Estimating the size of laterally phase separated cholesterol domains in model membranes with Förster resonance energy transfer: a simulation study

In this work, we use two vertically-coupled square two-dimensional lattices to simulate membrane bilayers containing a uniform size distribution of cholesterol immiscible domains of a predetermined size distribution. We substitute cholesterols and phospholipids with their fluorescent analogs and calculate the efficiency of energy transfer as a function of acceptor concentration for four membrane configurations. The simulated efficiency of energy transfer as a function of acceptor concentration data is then fit with an analytical FRET model to estimate the domain size, in the same manner in which experimental FRET data is analyzed. The fitted model parameters (domain size and donor partition coefficient) are compared to the simulation inputs to test the applicability of the FRET model to estimating the size of laterally phase separated cholesterol domains. We show that the FRET model yields good size estimates for domains that range between 1 and 25 nm. We also find that the assumed fluorophore configuration in the FRET model leads to a constant under-prediction of these values. Finally, we demonstrate that when two parameters are open to the fit, the FRET model adequately predicts the donor partition coefficient in addition to the domain size.     

Interaction of an antituberculosis drug with nano-sized cationic micelle: Förster resonance energy transfer from dansyl to rifampicin in the microenvironment

In this contribution, we report studies on the interaction of an antituberculosis drug rifampicin (RF) in a macromolecular assembly of CTAB with an extrinsic fluorescent probe, dansyl chloride (DC). The absorption spectrum of the drug RF has been employed to study Förster resonance energy transfer (FRET) from DC, bound to the CTAB micelle using picosecond resolved fluorescence spectroscopy. We have applied a kinetic model developed by Tachiya to understand the kinetics of energy transfer and the distribution of acceptor (RF) molecules around the donor (DC) molecules in the micellar surface with increasing quencher concentration. The mean number of RF molecules associated with the micelle increases from 0.24 at 20 μm RF concentration to 1.5 at 190 μm RF concentration and consequently the quenching rate constant (k_q) due to the acceptor (RF) molecules increases from 0.23 to 0.75 ns^?1 at 20 and 190 μm RF concentration, respectively. However, the mean number of the quencher molecule and the quenching rate constant does not change significantly beyond a certain RF concentration (150 μm ), which is consistent with the results obtained from time resolved FRET analysis. Moreover, we have explored the diffusion controlled FRET between DC and RF, using microfluidics setup, which reveals that the reaction pathway follows one‐step process.     

Fluorescence resonance energy transfer (FRET) for DNA biosensors: FRET pairs and Förster distances for various dye-DNA conjugates

Fluorescence resonance energy transfer (FRET) between the extrinsic dye labels Cyanine 3 (Cy3), Cyanine 5 (Cy5), Carboxytetramethyl Rhodamine (TAMRA), Iowa Black Fluorescence Quencher (IabFQ), and Iowa Black RQ (IabRQ) has been studied. The F?rster distances for these FRET-pairs in single- and double-stranded DNA conjugates have been determined. In particular, it should be noted that the quantum yield of the donors Cy3 and TAMRA varies between single- and double-stranded DNA. While this alters the F?rster distance for a donor-acceptor pair, this also allows for detection of thermal denaturation events with a single non-intercalating fluorophore. The utility of FRET in the development of nucleic acid biosensor technology is illustrated by using TAMRA and IabRQ as a FRET pair in selectivity experiments. The differential quenching of TAMRA fluorescence by IabRQ in solution has been used to discriminate between 0 and 3 base pair mismatches at 60 degrees C for a 19 base sequence. At room temperature, the quenching of TAMRA fluorescence was not an effective indicator of the degree of base pair mismatch. There appears to be a threshold of duplex stability at room temperature which occurs beyond two base pair mismatches and reverses the observed trend in TAMRA fluorescence prior to that degree of mismatch. When this experimental system is transferred to a glass surface through covalent coupling and organosilane chemistry, the observed trend in TAMRA fluorescence at room temperature is similar to that obtained in bulk solution, but without a threshold of duplex stability. In addition to quenching of fluorescence by FRET, it is believed that several other quenching mechanisms are occurring at the surface.     

Quantum dots as simultaneous acceptors and donors in time-gated Förster resonance energy transfer relays: characterization and biosensing

The unique photophysical properties of semiconductor quantum dot (QD) bioconjugates offer many advantages for active sensing, imaging, and optical diagnostics. In particular, QDs have been widely adopted as either donors or acceptors in F?rster resonance energy transfer (FRET)-based assays and biosensors. Here, we expand their utility by demonstrating that QDs can function in a simultaneous role as acceptors and donors within time-gated FRET relays. To achieve this configuration, the QD was used as a central nanoplatform and coassembled with peptides or oligonucleotides that were labeled with either a long lifetime luminescent terbium(III) complex (Tb) or a fluorescent dye, Alexa Fluor 647 (A647). Within the FRET relay, the QD served as a critical intermediary where (1) an excited-state Tb donor transferred energy to the ground-state QD following a suitable microsecond delay and (2) the QD subsequently transferred that energy to an A647 acceptor. A detailed photophysical analysis was undertaken for each step of the FRET relay. The assembly of increasing ratios of Tb/QD was found to linearly increase the magnitude of the FRET-sensitized time-gated QD photoluminescence intensity. Importantly, the Tb was found to sensitize the subsequent QD-A647 donor-acceptor FRET pair without significantly affecting the intrinsic energy transfer efficiency within the second step in the relay. The utility of incorporating QDs into this type of time-gated energy transfer configuration was demonstrated in prototypical bioassays for monitoring protease activity and nucleic acid hybridization; the latter included a dual target format where each orthogonal FRET step transduced a separate binding event. Potential benefits of this time-gated FRET approach include: eliminating background fluorescence, accessing two approximately independent FRET mechanisms in a single QD-bioconjugate, and multiplexed biosensing based on spectrotemporal resolution of QD-FRET without requiring multiple colors of QD.     

The determination of the Förster distance (R0) for phenanthrene and anthracene derivatives in poly(methyl methacrylate) films

Experiments that employ direct resonance energy transfer (DET) to obtain information about distances or domain sizes in polymer systems require independent information about the magnitude of the characteristic (F?rster) energy transfer distance R(0). Values of R(0) are relatively straightforward to obtain by the traditional spectral overlap method (R(0)(SO)) for dyes in fluid solution, but are much more difficult to obtain for dyes in rigid polymer films. Here one can obtain a value for R(0) as a fitting parameter (R(0)(FF)) for donor fluorescence decay experiments for samples containing a random distribution of donor and acceptor dyes in the polymer film. In previous experiments from our group, we needed values of R(0) for various phenanthrene (Phe, donor) and anthracene (An, acceptor) derivatives. In this paper, we describe experiments which determine R(0) values by both methods for a series of Phe-An donor-acceptor pairs in poly(methyl methacrylate) and polystyrene films. Both the location of substituents on the donor and acceptor as well as the choice of the medium had an effect on the measured R(0), which varied between 2.0 and 2.6 nm. We also ascertained that there is some unknown factor, also prevalent in the work of others, which results in the F?rster radius being larger when determined by the F?rster fit method than by the method of spectral overlap.     

Multichromophoric Förster resonance energy transfer from b800 to b850 in the light harvesting complex 2: evidence for subtle energetic optimization by purple bacteria

This work provides a detailed account of the application of our multichromophoric F?rster resonance energy transfer (MC-FRET) theory (Phys. Rev. Lett. 2004, 92, 218301) for the calculation of the energy transfer rate from the B800 unit to the B850 unit in the light harvesting complex 2 (LH2) of purple bacteria. The model Hamiltonian consists of the B800 unit represented by a single bacteriochlorophyll (BChl), the B850 unit represented by its entire set of BChls, the electronic coupling between the two units, and the bath terms representing all environmental degrees of freedom. The model parameters are determined, independent of the rate calculation, from the literature data and by a fitting to an ensemble line shape. Comparing our theoretical rate and a low-temperature experimental rate, we estimate the magnitude of the BChl-Qy transition dipole to be in the range of 6.5-7.5 D, assuming that the optical dielectric constant of the medium is in the range of 1.5-2. We examine how the bias of the average excitation energy of the B800-BChl relative to that of the B850-BChl affects the energy transfer time by calculating the transfer rates based on both our MC-FRET theory and the original FRET theory, varying the value of the bias. Within our model, we find that the value of bias 260 cm-1, which we determine from the fitting to an ensemble line shape, is very close to the value at which the ratio between MC-FRET and FRET rates is a maximum. This provides evidence that the bacterial system utilizes the quantum mechanical coherence among the multiple chromophores within the B850 in a constructive way so as to achieve efficient energy transfer from B800 to B850.