Guanine Substitutions Prevent Conformational Switch from Antiparallel to Parallel G-Quadruplex

Guanine quadruplexes, recently reported to form in vivo, represent a broad spectrum of non-canonical conformations of nucleic acids. The actual conformation might differ between water solutions and crowding or dehydrating solutions that better reflect the conditions in the cell. Here we show, using spectroscopic techniques, that most guanine substitutions prevent the conformational switch from antiparallel or hybrid forms to parallel ones when induced by dehydrating agents. The inhibitory effect does not depend on the position of the substitution, but, interestingly, on the type of substitution and, to some extent, on its destabilising potential. A parallel form might be induced in some cases by ligands such as N-methyl mesoporphyrin IX and even this ligand-induced switch is inhibited by guanine substitution. The ability or inability to have a conformation switch, based on actual conditions, might significantly influence potential conformation-dependent quadruplex interactions.     

Donor‐Induced Helical Inversion of 1,1′‐Binaphthyl Connecting with Two Molybdenum Complexes

An atropisomeric biaryl molecule with a given absolute configuration could present two opposite helical conformations through the rotation around C? C single bond. To the best of our knowledge, the biaryl system is the simplest helical inversion model apart from stereomutation between two enantiomers. Herein, we first report such true helical inversion phenomena of biaryl compounds. Two [Mo^VIO₂(L)]‐type complexes, in which L is a tridentate dioxoanionic pyridine O,N,O‐ligand, are coalesced on the 2,2′,3,3′‐positions of an (R)‐1,1′‐binaphthyl unit and an intramolecular dioxo bridge is formed by two Mo?O???Mo interactions. Exterior strong donors can coordinate to molybdenum to interrupt this dioxo bridge and inversions from negative to positive chirality are explicitly observed by circular dichroism spectroscopy, consistent with single‐crystal X‐ray diffraction analyses.     

Chiral Selectivity in the Binding of [4]Helicene Derivatives to Double‐Stranded DNA

The interaction of a series of chiral cationic [4]helicene derivatives, which differ by their substituents, with double‐stranded DNA has been investigated by using a combination of spectroscopic techniques, including time‐resolved fluorescence, fluorescence anisotropy, and linear dichroism. Addition of DNA to helicene solutions results to a hypochromic shift of the visible absorption bands, an increase of fluorescence quantum yield and lifetime, a slowing down of fluorescence anisotropy decay, and a linear dichroism in flow‐oriented DNA, which unambiguously points to the binding of these dyes to DNA. Both helicene monomers and dimeric aggregates, which form at higher concentration, bind to DNA, the former most probably upon intercalation and the latter upon groove binding. The binding constant depends substantially on the dye substituents and is, in all cases, larger with the M than the P enantiomer, by factors ranging from 1.2 to 2.3, depending on the dye.     

Chirality of Anisotropic Metal Nanowires with a Distinct Multihelix

Two‐dimensional (2D) anisotropic silver nanowire (AgNW) arrays, fabricated inside chiral mesoporous silica (CMS), exhibited strong and tunable plasmon circular dichroism (CD) signals in the visible and near‐IR regions due to collective dipole coupling between the anisotropic AgNWs. The multihelix with a helical channel orientation and helical arrays of opposite handedness in CMS played a predominant effects on the transversal and longitudinal chirality of the AgNWs, respectively.This behavior differs from both isotropic‐nanoparticle and single‐helix‐induced CD responses. This system will provide new insight into the optical activity of metal inorganic nanoparticles capped with chiral organic molecules and assembled in chiral environments.     

Introducing the Chiral Constrained α-Trifluoromethylalanine in Aib Foldamers to Control,Quantify and Assign the Helical Screw-Sense**

Oligomers of α-aminoisobutyric acid (Aib) are achiral peptides that adopt 3₁₀ helical structures with equal population of left- and right-handed conformers. The screw-sense preference of the helical chain may be controlled by a single chiral residue located at one terminus. ¹H and ¹⁹F NMR, X-ray crystallography and circular dichroism studies on new Aib oligomers show that the incorporation of a chiral quaternary α-trifluoromethylalanine at their N-terminus induces a reversal of the screw-sense preference of the 3₁₀-helix compared to that of a non-fluorinated analogue having an l -α-methyl valine residue. This work demonstrates that, among the many particular properties of introducing a trifluoromethyl group into foldamers, its stereo-electronic properties are of major interest to control the helical screw sense. Its use as an easy-to-handle ¹⁹F NMR probe to reliably determine both the magnitude of the screw-sense preference and its sign assignment is also of remarkable interest.     

Tricks of Light on Helices: Transformation of Helical Polymers by Photoirradiation

The following polymer structural transitions were achieved using light: preferred‐handed helix formation for poly(9,9‐di‐n‐octylfluoren‐2,7‐diyl), helix racemization (helix–helix transition) for poly(2,7‐bis(4‐t‐butylphenyl)fluoren‐9‐yl acrylate) and poly(2,5‐bis[4‐((S)‐2‐methylbutyloxy)phenyl]styrene), and helix decomposition for poly(2,7‐bis(4‐t‐butylphenyl)‐9‐methylfluoren‐9‐yl acrylate) and poly(2,7‐bis(4‐t‐butylphenyl)fluoren‐9‐ylmethyl methacrylate). Although these types of transitions and chemical transformations have been studied mainly using heat or chemicals as stimuli, light can also cause these structural alterations. In the helix construction and the helix–helix transition, a key transition is a twist‐coplanar conformational change of a biphenyl or an aryl–aryl unit in the side chain or the main chain of the polymer. Furthermore, the helix–helix transition was caused only by light and not by heat. The examples discussed in this review are expected to trigger off a new direction in synthesis and reaction of chiral polymers.     

500‐Fold Amplification of Small Molecule Circularly Polarised Luminescence through Circularly Polarised FRET

Strongly dissymmetric circularly polarised (CP) luminescence from small organic molecules could transform a range of technologies, such as display devices. However, highly dissymmetric emission is usually not possible with small organic molecules, which typically give dissymmetric factors of photoluminescence (g_PL) less than 10^?2. Here we describe an almost 10³‐fold chiroptical amplification of a π‐extended superhelicene when embedded in an achiral conjugated polymer matrix. This combination increases the |g_PL| of the superhelicene from approximately 3×10^?4 in solution to 0.15 in a blend film in the solid‐state. We propose that the amplification arises not simply through a chiral environment effect, but instead due to electrodynamic coupling between the electric and magnetic transition dipoles of the polymer donor and superhelicene acceptor, and subsequent CP Förster resonance energy transfer. We show that this amplification effect holds across several achiral polymer hosts and thus represents a simple and versatile approach to enhance the g‐factors of small organic molecules.     

Enantiospecific syntheses of copper cubanes, double-stranded copper/palladium helicates, and a (dilithium)-dinickel coronate from enantiomerically pure bis-1,3-diketones--solid-state self-organization towards wirelike copper/palladium strands

Enantiomerically pure, vicinal diols 1 afforded in a two-step synthesis (etherification and subsequent Claisen condensation) chiral bis-1,3-diketones H(2)L((S,S)) (3 a-c) with different substitution patterns. Reaction of these C(2)-symmetric ligands with various transition-metal acetates in the presence of alkali ions generated distinct polynuclear aggregates 4-8 by diastereoselective self-assembly. Starting from copper(II) acetate monohydrate and depending on the ratio of transition-metal ion to alkali ion to ligand, chiral tetranuclear copper(II) cubanes (C,C,C,C)-[Cu(4)(L((S,S)))(2)(OMe)(4)] (4 a-c) or dinuclear copper(II) helicates (P)-[Cu(2)(L((S,S)))(2)] (5) could be synthesized with square-pyramidal and square-planar coordination geometry at the metal center. In analogy to the last case, with palladium(II) acetate double-stranded helical systems (P)-[Pd(2)(L((S,S)))(2)] (6,7) were accessible exhibiting a linear self-organization of ligand-isolated palladium filaments in the solid state with short inter- and intramolecular metal distances. Finally, the introduction of hexacoordinate nickel(II) in combination with lithium hydroxide monohydrate and chiral ligand H(2)L((S,S)) (3 a) allowed the isolation of enantiomerically pure dinuclear nickel(II) coronate [(LiMeOH)(2) subset{(Delta,Lambda)-Ni(2)(L((S,S)))(2)(OMe)(2)}] (8) with two lithium ions in the voids, defined by the oxygen donors in the ligand backbone. The high diastereoselectivity, induced by the chiral ligands, during the self-assembly process in the systems 4-8 could be exemplarily proven by circular dichroism spectroscopy for the synthesized enantiomers of the chiral copper(II) cubane 4 a and palladium(II) helicate 6.     

Helical arrays of pendant fullerenes on optically active poly(phenylacetylene)s

Novel, optically active, stereoregular poly(phenylacetylene)s bearing the bulky fullerene as the pendant were synthesized by copolymerization of an achiral phenylacetylene bearing a [60]fullerene unit with optically active phenylacetylene components in the presence of a rhodium catalyst. The C60-bound phenylacetylene was prepared by treatment of C60 with N-(4-ethynylbenzyl)glycine in a Prato reaction. The obtained copolymers exhibited induced circular dichroism (ICD) in solution both in the main-chain region and in the achiral fullerene chromophoric region, although their ICD intensities were highly dependent on the structures of the optically active phenylacetylenes and the solution temperature. These results indicate that the optically active copolymers form one-handed helical structures and that the pendant achiral fullerene groups are arranged in helical arrays with a predominant screw sense along the polymer backbone. The structures and morphology of the copolymers on solid substrates were also investigated by atomic force microscopy.     

7,7,8,8‐Tetraaryl‐o‐quinodimethane Stabilized by Dibenzo Annulation: A Helical π‐Electron System That Exhibits Electrochromic and Unique Chiroptical Properties

When two benzene rings are fused to a tetraaryl‐o‐quinodimethane skeleton, sterically hindered helical molecules 1 acquire a high thermodynamic stability. Because the tetraarylbutadiene subunit contains electron‐donating alkoxy groups, 1 undergo reversible two‐electron oxidation to 2 ²⁺, which can be isolated as deeply colored stable salts. Intramolecular transfer of the point chirality (e.g., sec‐butyl) on the aryl groups to helicity induces a diastereomeric preference in dications 2 b ²⁺ and 2 c ²⁺, which represents an efficient method for enhancing circular‐dichroism signals. Thus, those redox pairs can serve as new electrochiroptical response systems. X‐ray analysis of dication 2 ²⁺ revealed π–π stacking interaction of the diarylmethylium moieties, which is also present in solution. The stacking geometry is the key contributor to the chirosolvatochromic response.     

Beta Sheets with a Twist: The Conformation of Helical Polyisocyanopeptides Determined by Using Vibrational Circular Dichroism

Detailed information on the architecture of polyisocyanopeptides based on vibrational circular dichroism (VCD) spectroscopy in combination with DFT calculations is presented. It is demonstrated that the screw sense of the helical polyisocyanides can be determined directly from the C?N‐stretch vibrational region of the VCD spectrum. Analysis of the VCD signals associated with the amide I and amide II modes provides detailed information on the peptide side‐chain arrangement in the polymer and indicates the presence of a helical β‐sheet architecture, in which the dihedral angles are slightly different to those of natural β‐sheet helices.     

Chiral molecular glass: synthesis and characterization of enantiomerically pure thiophene-based [7]helicene

Synthesis of thiophene-based [7]helicenes, which are functionalized for both design of organic chiral glasses with strong chiroptical properties and for further homologation to higher [n]helicenes, is reported. The key synthetic transformations are kinetic resolution of the intermediate diketone and the annelation step forming the center benzene ring by means of an intramolecular McMurry reaction. Based upon X-ray crystallographic determinations of the absolute configurations for (+)-enantiomers of the diketone and the [7]helicene, stereochemical correlation between the (R) axial chirality of the diketone and the (M) helical chirality of the [7]helicene is established. One such enantiopure trimethylsilyl-substituted [7]helicene possesses enchanced chiroptical properties and forms a chiral molecular glass.     

Reversible mutarotation in a macrocyclic ytterbium complex

M40 is a four-fold symmetry macrocyclic ligand endowed with axial and central chiral elements, all of R configuration. It promptly binds late lanthanides (Yb(III) and Lu(III) ) yielding a negative helicity, as witnessed by NIR-electronic circular dichroism. In the course of a few hours, a new conformation of the complex takes over, which has opposite helicity and allows for a dynamic free-bound equilibrium. Upon slow solvent evaporation, the original conformation is retrieved and the whole dynamic process can be started again, as in a sandclock, allowing one to envisage applications as a time-marker chiral switch.