The Aluminum-Bromide-Catalyzed Adamantane Rearrangement of syn- and anti-Tricyclo[4.2.1.12,5]decane

In the presence of AlBr₃ in CS₂ at temperatures below 0°, syn-tricyclo[4.2.1.1^2,5]decane ( 1 ) isomerizes exclusively to anti-tricyclo[4.2.1.1^2,5]decane ( 2 ) at a higher rate than the latter rearranges to 2-exo,3-exo-trimethylene-8,9,10-trinorbornane ( 4 ). However, at temperature above 0°, the anti-isomer 2 isomerizes to 4 faster than 1 to 2 and 4 . As a consequence, hydride abstraction occurs at C(3) (→carbocation a , which rearranges to carbocation b (anti-skeleton)) in the syn-isomer 1 , and more readily at C(9) (→carbocation c ) than at C(3) (→carbocation b ) in the anti-isomer 2 .     

Investigation of the reaction between sodium hydroxide and syn-and anti-isomers of 5-substituted 2-(4-chlorobutyryl)-aminobenzophenones oximes

By the reaction of syn-isomers of 5-substituted 2-(4-chlorobutyryl)aminobenzophenones oximes with NaOH syn-isomers of 5-substituted 2-(2-oxopyrrolidin-1-yl)benzophenones oximes were obtained. Similarly the anti-isomers of 5-substituted 2-(4-chlorobutyryl)aminobenzophenones oximes treated with NaOH underwent cyclization into anti-isomers of 5-substituted 2-(2-oxopyrrolidin-1-yl)benzophenones oximes. Crystal and molecular structures were investigated of the syn-isomer of 5-methyl-2-(2-oxopyrrolidin-1-yl)benzophenone oxime, the anti-isomer of 5-bromo-2-(2-oxopyrrolidin-1-yl)benzophenone oxime, and the syn-isomer of 5-methyl-2-(4-chlorobutyryl)aminobenzo-phenone oxime. The fragmentation features under the electron impact of syn-and anti-isomers of 5-substituted 2-(2-oxopyrrolidin-1-yl)benzophenones oximes are discussed.     

Anchimeric assistance in vapor-phase acetate thermolysis

The occurrence of anchimeric assistance in the vapor-phase thermolysis of anti- and syn-7-acetoxy-7-methylnorbornene and 7-acetoxy-7-methylnorborane has been investigated. The relative rates of thermolysis were found to be 1.9, 0.87, and 1.0, respectively. The nature of the transition state for ester thermolysis is discussed in light of the small amount of anchimeric assistance found in the thermolysis of the anti-isomer.     

Beckmann Fragmentation and Rearrangement. Part VII. Fragmentation and cyclization of α-methylthio-ketoximes. Fragmentation reactions no. 27

α-Methylthio-propiophenone anti-oxime p-toluenesulfonate (tosylate) ( 12b ) fragments quantitatively in 80% ethanol yielding benzonitrile and a methylidenesulfonium ion 15 . The syn-isomer, however, undergoes a Beckmann rearrangement. The fragmentation of α-methylthio-isobutyropher one anti-oxime tosylate ( 13b ) is accompanied by cyclization to the 1, 2-thiazetin-1-ium ion 27 , which is hydrolyzed via the sulfimine 29 to the keto sulfide 20 and the keto sulfoxide 30 . A comparison of the rates of the α-alkylthio anti-ketoxime tosylates 12b and 13b and of the homomorphous oxime tosylates 16b and 17b shows that fragmentation and cyclization are strongly assisted by the sulfur atom. Whereas both the anti- and syn-isomers of α-amino ketoxime derivatives fragment quantitatively, only the anti-isomers of α-alkylthio ketoxime derivatives undergo facile fragmentation.     

Synthetic studies toward marine toxic polyethers (4) synthesis of segment -A of okadaic acid via anti-selectivity by heteroconjugate addition

Segment-A of okadaic acid was synthesized in an optically active form by coupling the lithium acetylide (segment-A₂) and the previously prepared segment-A₁. The key step was the preparation of $\text{anti}$-diastereoisomer for C-12/13 asymmetric center by means of heteroconjugate addition involving Mitsunobu inversion of $\text{syn}$-isomer or direct formation of $\text{anti}$-isomer by beta-chelation effect.     

Structural Diversity in Cyclometalated Diiridium(III) Complexes with Bridging syn and anti μ2-Oxamidato and μ2-Dithioxamidato Ligands

Six new diiridium complexes containing 2-methyl-6-phenylpyridyl as the cyclometalating ligand with a μ₂-oxamidato or a μ₂-dithioxamidato ligand as the bridge have been synthesized in 60–73 % yields. These complexes were revealed by multinuclear NMR spectroscopy to contain inseparable mixtures of diastereomers (rac, ΔΔ/ΛΛ and meso, ΔΛ) with bridges in anti and syn configurations. The remarkable variety of isomers present was confirmed by X-ray crystallography on single crystals grown from mixtures of each complex. In one complex with a N,N’-bis(4-trifluoromethylphenyl)-μ₂-oxamidato bridge, two single crystals of anti and syn isomers were structurally determined. Two single crystals of the μ₂-dithioxamidato bridge complex were found to contain rac and meso forms of the syn isomer. Hybrid DFT computations on the four isomers of each diiridium complex revealed negligible energetic preferences for one isomer despite the methyl groups in the 2-methyl-6-phenylpyridyl cyclometalating ligands being close to the neighboring methyl groups and the bridge, thus supporting the experimental findings of isomer mixtures. Two distinct broad emissions with maxima at 522–529 nm and at 689–701 nm observed in these complexes in dichloromethane are attributed to mixed metal-ligand to ligand charge transfer (MLLCT) excited states involving the pyridyl and bridge moieties respectively with the aid of electronic structure computations.     

Beckmann Fragmentation and Rearrangement. Part VI thian-3-one oximes. Fragmentation reactions no. 26

In 70% aqueous dioxane thian-3-one anti-oxime p-toluenesulfonate (tosylate) ( 8b ) undergoes concerted fragmentation to the methylidenesulfonium ion 14 , part of which recyclizes to 1,3-thiazepin-4-one ( 11 ). With the syn-isomer 8b rearrangement to 1,4-thiazepin-3-one ( 10 ) and fragmentation to 14 occur in the ratio 4:1. Analysis of the rate data in 80% ethanol shows that anti fragmentation is 142 times as fast as syn fragmentation, but only 26 times as fast as rearrangement of the ‘homomorphous’ thian-4-one oxime tosylate ( 18b ). A comparison of the rates of cyclohexanone oxime tosylate 20 , thian-3- and -4-one oxime tosylates reveals the rate retarding influence of sulfur. – The configurations assigned to the stereoisomeric thian-3-one oximes ( 8a ) in the literature have to be reversed in the light of present results.     

Synthesis of a New System Containing a Pyramidalized Double Bond: Lack of Reactivity of a Strongly Protected Pyramidalized Double Bond

The chemical reactivity of syn‐ 3 was investigated. The experimental results showed that the central double bond of this system is inert toward chemical reactions. To determine the reactivity of this central double bond, we synthesized syn‐ and anti‐ 7 and recorded their photoelectron spectra. Low first‐ionization potentials of syn‐ and anti‐ 7 (7.6 eV) clearly indicated that these compounds should be highly reactive.     

Eine ungewöhnliche Chlorwasserstoff-Abspaltung: syn-Eliminierung aus einem sterisch behinderten,aber freidrehbaren Halogenkohlenwasserstoff

An Unusual Dehydrochlorination: syn-Elimination from a Sterically Hindered, but Free Rotating Halogenated Hydrocarbon Depending on the solvent, the meso-3, 4-dichloro-2,2,5,5-tetramethylhexane undergoes base-promoted dehydrochlorination in a syn- or anti-periplanar manner, thus affording (Z)-3-chloro-2,2,5,5-tetramethyl-3-hexene and the thermodynamically less stable (E)-isomer, respectively. Alcoholate aggregates of different size (presumably, dimers and trimers or tetramers) are alternatively involved in these stereochemically distinct conversions, at least when potassium t-butoxide in t-butyl alcohol or tetrahydrofuran serves as a base/solvent system.     

Bimanes (1,5-diazabicyclo[3.3.0]octadienediones): Laser activity in syn-bimanes

The conversion of 3-methyl-4-benzyl-4-chloro-2-pyrazolin-5-one 10b was catalyzed by a mixture of potassium fluoride and alumina to give syn-(methyl, benzyl)bimane 6 (62%) without detectable formation of the anti isomer, A6 [a 1 : 1 mixture (87%) of the isomers 6 and A6 was obtained when the catalyst was potassium carbonate]. In a similar reaction syn-(methyl,carboethoxymethyl)bimane 7 (15%) with the anti isomer A7 (36%) was obtained from 3-methyl-4-carboethoxymethyl-4-chloro-2-pyrazolin-5-one 10c . syn-(Methyl, β-acetoxyethyl)bimane 8 (70%) was obtained from 3-methyl-4-β-acetoxyethyl-4-chloro-2-pyrazolin-5-one 10d (potassium carbonate catalysis) and was converted by hydrolysis to syn-(methyl, β-hydroxyethyl)bimane 9 (40%). Acetyl nitrate (nitric acid in acetic anhydride) converted anti-(amino,hydrogen)bimane 11 to anti-(amino,nitro)bimane 15 (91%), anti-(methyl,hydrogen)bimane 13 to anti-(methyl,nitro)(methyl,hydrogen)bimane 16 (57%), and degraded syn-(methyl,hydrogen)bimane 12 to an intractable mixture. Treatment with trimethyl phosphite converted syn-(bromomethyl,methyl)bimane 17 to syn-(dimethoxyphosphinylmethyl,methyl)bimane 18 (78%) that was further converted to syn-(styryl,methyl)bimane 19 (29%) in a condensation reaction with benzaldehyde. Treatment with acryloyl chloride converted syn-(hydroxymethyl,methyl)bimane 20 to its acrylate ester 21 (22%). Stoichiometric bromination of syn-(methyl,methyl)bimane 1 gave a monobromo derivative that was converted in situ by treatment with potassium acetate to syn-(acetoxymethyl,methyl)(methyl,methyl)bimane 47 . N-Amino-μ-amino-syn-(methylene,methyl)bimane 24 (68%) was obtained from a reaction between the dibromide 17 and hydrazine. Derivatives of the hydrazine 24 included a perchlorate salt and a hydrazone 25 derived from acetone. Dehydrogenation of syn-(tetramethylene)bimane 26 by treatment with dichlorodicyanobenzoquinone (DDQ) gave syn-(benzo,tetramethylene)bimane 27 (58%) and syn-(benzo)bimane 28 (29%). Bromination of the bimane 26 gave a dibromide 29 (92%) that was also converted by treatment with DDQ to syn-(benzo)bimane 28 . Treatment with palladium (10%) on charcoal dehydrogenated 5, 6, 10, 11-tetrahydro-7H,9H-benz [6, 7] indazol [1, 2a]benz[g]indazol-7,9-dione 35 to syn-(α-naphtho)bimane 36 (71%). The bimane 35 was prepared from 1,2,3,4-tetrahydro-1-oxo-2-naphthoate 37 by stepwise treatment with hydrazine to give 1,2,4,5-tetrahydro-3H-benz[g]indazol-3-one 38 , followed by chlorine to give 3a-chloro-2,3a,4,5-tetrahydro-3H-benz[g]indazol-3-one 39 , and base. Dehydrogenation over palladium converted the indazolone 34 to 1H-benz[g] indazol-3-ol 36 . Helicity for the hexacyclic syn-(α-naphtho)bimane 36 was confirmed by an analysis based on molecular modeling. The relative efficiencies (RE) for laser activity in the spectral region 500–530 nm were obtained for 37 syn-bimanes by reference to coumarin 30 (RE 100): RE > 80 for syn-bimanes 3, 5, 18 , and μ-(dicarbomethoxy)methylene-syn-(methylene,methyl)bimane 22 : RE 20–80: for syn-bimanes 1,2,4,20,24,26 , and μ-thia-syn-(methylene,methyl)bimane 50 : and RE 0-20 for 26 syn-bimanes. The bimane dyes tended to be more photostable and more water-soluble than coumarin 30. The diphosphonate 18 in dioxane showed laser activity at 438 nm and in water at 514 nm. Presumably helicity, that was demonstrated by molecular modeling, brought about a low fluorescence intensity for syn-(α-naphtho)bimane 36 , Φ0.1, considerably lower than obtained for syn-(benzo)bimane 28 , Φ0.9.     

Encapsulation-Controlled Photoisomerization of a Styryl Derivative: Stereoselective Formation of the Anti Z-Isomer in the Cucurbit[7]uril Cavity

The photochemical isomerization of a styrylpyridinium dye ( SP ) bearing an unsymmetrically attached benzo-15-crown-5 ether has been studied in aqueous solution in the absence and presence of cucurbit[7]uril (CB[7]). The detailed analysis of the UV/Vis and NMR spectra showes that the isomeric composition of the photostationary mixtures of SP can be modulated by the host-guest complexation with CB[7]. It was found that steric hindrance caused by encapsulation of SP in the host cavity induces the exclusive formation of the anti conformer of Z- SP in contrast with the mixture of both anti and syn conformers obtained during photoisomerization of the dye without CB[7]. Remarkably, the displacement of anti Z- SP from CB[7] does not lead to the transformation of the anti Z-isomer into the syn Z-isomer pointing out the conformational memory of the system. The results provide an interesting example of the supramolecular stereorecognition by the achiral CB[7] host.     

Nichtplanare Doppelbindung in einem kristallinen Derivat von anti-Sesquinorbornen (anti-Tetracyclo[6.2.1.13,6.02,7]dodec-2(7)-en)

Non-Planar Double Bond in a Crystalline Derivative of anti-Sesquinorbornene (anti-Tetracyclo[6.2.1.1^3,6.0^2,7]dodec-2(7)-ene) The olefinic double bond of the title compound 2 has been observed by X-ray techniques to deviate from planarity by 13.2 (0.3)° (symmetric out-of-plane bending). Empirical force field calculations for the parent hydrocarbon 1 (anti-sesquinorbornene) give a much larger corresponding deviation of 35.6°. The calculated nonplanar double bond deformations in anti-sesquinorbornene 1 as well as in the syn-isomer 4 and other related olefins are a consequence of substantial widenings of the exocyclic C(sp³)–C(sp²–Csp³) angles when keeping the double bond planar. The considerable computational exaggeration of this novel out-of-plane bending mechanism is attributed to various possible force field deficiencies.     

Bishomochinon

Two isomeric 2,4,6,8-tetrabromo-cyclooctane-1,5-diones ( 8a and 8b ) are formed in the tetrabromination of cyclooctane-1,5-dione ( 7 ). Treatment of a mixture of 8a and 8b with triethylamine gives rise to anti- 1,3-dibromo-bishomoquinone ( 9 ), which is reduced with zinc to anti-bishomoquinone ( 4 ) in a 65% overall yield. Either 8a or 8b , when heated with copper powder in a high vacuum, affords 1-bromo( 11 ) and 1,3-dibromo-anti-bishomoquinone ( 9 ), anti-bishomoquinone ( 4 ) itself as well as its sys-isomer ( 5 ). The anti-configuration was assigned to 4 on the basis of its reduction to two diols, one of which showed NMR. coupling of its two isochronic carbinol protons with one cis-vicinal proton and one trans-vicinal proton. Spectral data of the compounds are discussed. Of particular interest is the inversion of the chemical shifts of exo- and endo-methylene protons when comparing the NMR.-spectra of anti- and syn-bishomoquinone.     

G‐Quadruplex Secondary Structure Obtained from Circular Dichroism Spectroscopy

A curated library of circular dichroism spectra of 23 G‐quadruplexes of known structure was built and analyzed. The goal of this study was to use this reference library to develop an algorithm to derive quantitative estimates of the secondary structure content of quadruplexes from their experimental CD spectra. Principal component analysis and singular value decomposition were used to characterize the reference spectral library. CD spectra were successfully fit to obtain estimates of the amounts of base steps in anti–anti, syn–anti or anti–syn conformations, in diagonal or lateral loops, or in other conformations. The results show that CD spectra of nucleic acids can be analyzed to obtain quantitative structural information about secondary structure content in an analogous way to methods used to analyze protein CD spectra.     

Synthesis and Photochemistry of syn- and anti-9,10-Epoxy-1, 4-dihydro-1,4-ethanonaphthalene-2,3-diones

The title epoxydiketones were prepared stereoselectively, direct epoxidation of 3a-c with MCPBA produced syn isomers la-c whereas epoxidation of 4a-d followed by saponification of the spirolactone rings gave anti isomers 2a-c. The stereochemistry of 1a and 2a was established by X-ray diffraction, whereas that of the remaining epoxydiketones was determined from the correlation of visible, ¹H, and ¹³C NMR spectral data; the differences between spectra of the corresponding syn and anti isomers are explained in terms of through-space interaction and steric effects. Photolysis of syn isomers 1a-c afforded the corresponding naphthalenes 8a-c in almost quantitative yields; in contrast, irradiation of anti isomers 2a-c gave complicated mixtures. The quantum yield of disappearance of 1a was 52 times that of 2a. Reaction mechanisms are proposed to account for the product formation. The differences in the photochemical behavior of the title syn and anti isomers are rationalized in terms of stereoelectronic effects of the epoxy rings in the syn isomers.     

A High‐Barrier Molecular Balance for Studying Face‐to‐Face Arene–Arene Interactions in the Solid State and in Solution

An atropisomeric molecular balance was developed to study face‐to‐face arene–arene interactions. The balance has a large central 1,4,5,8‐naphthalene diimide surface that forms intramolecular arene–arene interactions with two pendent arms. The balance adopts distinct syn and anti isomers with varying numbers of intramolecular interactions. Thus, the strength of the arene–arene interaction could be quantitatively measured by NMR spectroscopy from the anti/syn ratios. The size of the arene arms was easily varied, which allowed examination of the relationship between arene size and strength of the interaction. A nonlinear size dependence was observed in solution with larger arene arms having a disproportionately stronger arene–arene interaction. The intramolecular arene–arene interactions were also characterized in the solid state by X‐ray crystallography. These studies were facilitated by the kinetic stability of the syn and anti isomers at room temperature due to the high isomerization barrier (ΔG=27.0 kcal mol^?1). Thus, the anti isomer could be selectively isolated and crystallized in its folded conformation. The X‐ray structures confirmed that the anti isomers formed two strong intramolecular arene–arene interactions with face‐to‐face geometries. The solid‐state structure analysis also reveals that the rigid framework may contribute to the observed nonlinear size trend. The acetate linker is slightly too long, which selectively destabilizes the balances with smaller arene arms. The larger arene arms are able to compensate for the longer linker and form effective intramolecular arene–arene interactions.     

The Structure and Conformation of (CH3)3CSNO

The gas‐phase molecular structure of (CH₃)₃CSNO was investigated by using electron diffraction, allowing the first experimental geometrical parameters for an S‐nitrosothiol species to be elucidated. Depending on the orientation of the ?SNO group, two conformers (anti and syn) are identified in the vapor of (CH₃)₃CSNO at room temperature, the syn conformer being less abundant. The conformational landscape is further scrutinized by using vibrational spectroscopy techniques, including gas‐phase and matrix‐isolation IR spectroscopy, resulting in a contribution of ca. 80:20 for the anti:syn abundance ratio, in good agreement with the computed value at the MP2(full)/cc‐pVTZ level of approximation. The UV/Vis and resonance Raman spectra also show the occurrence of the conformational equilibrium in the liquid phase, with a moderate post‐resonance Raman signature associated with the 350 nm electronic absorption.     

Stereodivergent Organocatalytic Intramolecular Michael Addition/Lactonization for the Asymmetric Synthesis of Substituted Dihydrobenzofurans and Tetrahydrofurans

A stereodivergent asymmetric Lewis base catalyzed Michael addition/lactonization of enone acids into substituted dihydrobenzofuran and tetrahydrofuran derivatives is reported. Commercially available (S)‐(?)‐tetramisole hydrochloride gives products with high syn diastereoselectivity in excellent enantioselectivity (up to 99:1 d.r._syn/anti, 99 % ee_syn), whereas using a cinchona alkaloid derived catalyst gives the corresponding anti‐diastereoisomers as the major product (up to 10:90 d.r._syn/anti, 99 % ee_anti).     

Sequential Hydrogen Tunneling in o-Tolylmethylene

o-Tolylmethylene 1 is a metastable triplet carbene that rearranges to o-xylylene 2 even at temperatures as low as 2.7 K via [1,4] H atom tunneling. Electron paramagnetic resonance (EPR) and electron nuclear double resonance (ENDOR) spectroscopical techniques were used to identify two conformers of 1 (anti and syn) in noble gas matrices and in frozen organic solutions. Conformer-specific kinetic measurements revealed that the rate constants for the rearrangements of the anti and syn conformers of 1 are very similar. However, the orbital alignment in the syn conformer is less favorable for the hydrogen transfer reaction than the orbital configuration in the anti conformer. Our spectroscopic and quantum chemical investigations indicate that anti 1 and syn 1 rapidly interconvert via efficient quantum tunneling forming a rotational pre-equilibrium. The subsequent second tunneling reaction, the [1,4] H migration from anti 1 to 2 , is rate-limiting for the formation of 2 . We here present an efficient strategy for the study of such tunneling equilibria.     

Equilibres conformationnels de glucides au niveau de liaisons σ sp2-sp3 C-C. III Dérivés d'oximes d'aldéhydo-sucres utilisation de tris-dipivaloylméthanato-europium

A series of sugar oximes and O-methyloximes of the general formula RCH?NOR′ (R′ ? H, CH₃) have been studied by PMR. spectroscopy. These compounds exist in solution as a mixture of the syn and anti isomers. The conformational equilibrium of the syn isomers seems to consist exclusively of the eclipsed rotamers, whereas for the anti isomers there appears to be a significant contribution from bisecting rotamers. Using tris-dipivaloylmethanato-europium it is found that the α proton of the anti oximes is much more deshielded than the corresponding proton of the syn isomers, which means that the downfield shift of a particular proton does not depend exclusively on its distance from the oxygen of the oxyimino group.