Phonon-assisted excitation energy transfer in photosynthetic systems

The phonon-assisted process of energy transfer aiming at exploring the newly emerging frontier between biology and physics is an issue of central interest.This article shows the important role of the intramolecular vibrational modes for excitation energy transfer in the photosynthetic systems.Based on a dimer system consisting of a donor and an acceptor modeled by two two-level systems,in which one of them is coupled to a high-energy vibrational mode,we derive an effective Hamiltonian describing the vibration-assisted coherent energy transfer process in the polaron frame.The effective Hamiltonian reveals in the case that the vibrational mode dynamically matches the energy detuning between the donor and the acceptor,the original detuned energy transfer becomes resonant energy transfer.In addition,the population dynamics and coherence dynamics of the dimer system with and without vibration-assistance are investigated numerically.It is found that,the energy transfer efficiency and the transfer time depend heavily on the interaction strength of the donor and the high-energy vibrational mode,as well as the vibrational frequency.The numerical results also indicate that the initial state and dissipation rate of the vibrational mode have little influence on the dynamics of the dimer system.Results obtained in this article are not only helpful to understand the natural photosynthesis,but also offer an optimal design principle for artificial photosynthesis.     

Vibrational energy redistribution and vibrational dynamics of methanol mixed with Rhodamine 101 dye

Vibrational energy transfer that occurs after photoexcitation can be tracked in the first several femtoseconds by ultrafast time- and frequency-resolved CARS (coherent anti-Stokes Raman scattering) spectroscopy. Vibrational energy transfer from high-frequency modes to lower ones through chemical bond of pure methanol and methanol/Rhodamine 101 (Rh101) solution is detected. Through comparison and analysis of the experimental results, it is found that surrounding molecules have a significant influence on vibrational energy transfer and vibrational couplings among relevant modes.     

Vibrational dynamics of nitromethane mixed with IR780 dye studied by coherent anti‐stokes Raman spectroscopy

Vibrational coupling between different kinds of molecules in liquid mixture is studied by multiplex coherent anti‐Stokes Raman spectroscopy (CARS). To identify vibrational coherence, fs‐probe with high time resolution and narrowband‐probe with high spectral resolution are adopted in CARS experiments. Using liquid nitromethane (NM) mixed with organic dye IR780 perchlorate as the sample, we can clearly observe the interference between different vibrational modes. The intermolecular vibrational interaction between NM and IR780 molecules results in the vibrational coherence transfer (VCT) in the form of a change of phase correlation. Compared with symmetric bending vibration of NO₂, coherence transfer is found to be easier to take place between C―N bond of NM and vibrations of IR780, which indicates the selectivity of intermolecular vibrational interaction. The selectivity is deduced to be related to the coordination between intramolecular and collective motion of molecules. Copyright © 2016 John Wiley & Sons, Ltd.     

Scanning the energy dissipation process of energetic materials based on excited state relaxation and vibration–vibration coupling

The energy dissipation mechanism of energetic materials(EMs) is very important for keeping safety. We choose nitrobenzene as a model of EM and employ transient absorption(TA) spectroscopy and time-resolved coherent anti-stokes Raman scattering(CARS) to clarify its energy dissipation mechanism. The TA data confirms that the excited nitrobenzene spends about 16 ps finishing the twist intramolecular charge transfer from benzene to nitro group, and dissipates its energy through the rapid vibration relaxation in the initial excited state. And then the dynamics of vibrational modes(VMs) in the ground state of nitrobenzene, which are located at 682 cm~(-1)(v_1), 854 cm~(-1)(v_2), 1006 cm~(-1)(v_3), and 1023 cm~(-1)(v_4),is scanned by CARS. It exhibits that the excess energy of nitrobenzene on the ground state would further dissipate through intramolecular vibrational redistribution based on the vibrational cooling of vi and v_2 modes, v_1 and v_4 modes, and v_3 and v_4 modes. Moreover, the vibration-vibration coupling depends not only on the energy levels of VMs, but also on the spatial position of chemical bonds relative to the VM.     

Intramolecular vibrational dynamical barrier due to extremely irrational couplings

The intramolecular vibrational dynamics due to extremely irrational couplings is demonstrated by contrast to the resonance couplings, for the three-mode case of H分子物理学 分子内振动弛豫 甚高频无理耦合 共鸣 振动动力学intramolecular vibrational relaxation, extremely irrational couplings, resonanceProject supported by the National Natural Science Foundation of China (Grant No~20373030) and the Foundation for Key Program of Ministry of Education, China (Grant No~306020) and the Specialized Research Fund for the Doctoral Program of Higher Educatio2007-03-04The intramolecular vibrational dynamics due to extremely irrational couplings is demonstrated by contrast to the resonance couplings, for the three-mode case of H2O as an example. The extremely irrational couplings are shown to impose such strong hindrance to intramolecular vibrational relaxation （IVR） that they act as barriers. They restrict the direct action/energy transfer between the two stretching modes, though they allow the transfer between a stretching and a bending modes. In contrast, the resonance is more mediated by the bending mode and leads to chaotic IVR. It is also shown that there is a region in the dynamical space in which resonance and extremely irrational couplings coexist.     

Energy transfer between two aggregates in light-harvesting complexes

Energy transfer processes between two aggregates in a coupled chromophoric-pigment(protein)system are studied via the standard master equation approach.Each pigment of the two aggregates is modeled as a two-level system.The excitation energy is assumed to be transferred from the donor aggregate to the acceptor aggregate.The model can be used to theoretically simulate many aspects of light-harvesting complexes(LHCs).By applying the real bio-parameters of photosynthesis,we numerically investigate the efficiency of energy transfer(EET)between the two aggregates in terms of some factors,e.g.,the initial coherence of the donor aggregate,the coupling strengthes between the two aggregates and between different pigments,and the effects of noise from the environment.Our results provide evidence for that the actual numbers of pigments in the chromophoric rings of LHCs should be the optimum parameters for a high EET.We also give a detailed analysis of the effects of noise on the EET.     

Spectroscopy of vibrational modes in metal nanoshells

In this work we study the spectrum of vibrational modes in metal nanoparticles with a dielectric core. Vibrational modes are excited by the rapid heating of the particle lattice that takes place after laser excitation, and can be monitored by means of pump-probe spectroscopy as coherent oscillations of transient optical spectra. In nanoshells, the presence of two metal surfaces results in a substantially different energy spectrum of acoustic vibrations than for solid particles. We calculated the energy spectrum as well as the damping of nanoshell vibrational modes. The oscillator strength of the fundamental breathing mode is larger than that in solid nanoparticles. At the same time, in very thin nanoshells, the fundamental mode is overdamped due to instantaneous energy transfer to the surrounding medium. PACS 78.67.-n; 78.67.Bf; 63.22.+m     

Role of Mode-mode Coupling in Short-time Excited State Decay

Master equation of a relevant electronic and vibrational system is derived for a special diabatic basis corresponding to vertical processes. It is shown that bath modes contribute dynamically to the inter-state coupling only at short times. For long times the bath-induced inter-state coupling is static and increases with the contribution of bath modes to the Stokes shift and to the Herzberg-Teller correction of the excited state. Simultaneously, the time evolution of excited state population is studied numerically for the system consisting of two electronic levels interacting with two vibrational modes, coupled to a heat bath. A mutual coupling of the vibrational modes in the excited state is taken into account (Duschinsky effect). Excited state population relaxes faster if interacting vibrational mode dissipates its energy via vibrational mode of a smaller eigenfrequency. Fast component of excited state depopulation cannot be achieved via coherent mode-mode coupling, if the second mode is not directly coupled to the electronic inter-state transition.     

Ultrafast proton transfer dynamics of 2-(2'-hydroxyphenyl)benzoxazole dye in different solvents

The excited-state intramolecular proton transfer of 2-(2-hydroxyphenyl)benzoxazole dye in different solvents is investigated using ultrafast femtosecond transient absorption spectroscopy combined with quantum chemical calculations.Conformational conversion from the syn-enol configuration to the keto configuration is proposed as the mechanism of excited-state intramolecular proton transfer.The duration of excited-state intramolecular proton transfer is measured to range from 50 fs to 200 fs in different solvents.This time is strongly dependent on the calculated energy gap between the N-S;and T-S;structures in the S;state.Along the proton transfer reaction coordinate,the vibrational relaxation process on the S;state potential surface is observed.The duration of the vibrational relaxation process is determined to be from8.7 ps to 35 ps dependent on the excess vibrational energy.     

Charge transfer excitons: dynamic theory of vibronic spectra

The vibronic spectra of charge transfer excitons (CTE) in a molecular one-component or alternatingly ordered two-component chain are treated in the framework of a dynamic approach (neglecting thermal excitations of the intramolecular vibrations). The model introduces two mechanisms of coupling between CTEs and vibrational quanta: (1) shift of the equilibrium positions of the nuclei in the ionized donor or acceptor; (2) change of the vibrational frequency in the ionized molecule. This model allows to generalize the simple CTE Hamiltonian and the vibronic Hamiltonian of Frenkel excitons. The linear optical susceptibility is calculated in the vibronic region (one CTE and one vibrational quantum). The double splitting of vibronics of CTEs was analyzed: (1) the splitting connected with the location of the intramolecular vibration on the donors or on the acceptors; (2) the splitting connected with the symmetry of the vibronic spectra (in the degenerate case). The general structure of the vibronic spectra of CTEs is established. It contains structureless absorption lines, which correspond to two-particle bands (the phonon is excited on a neutral molecule neighboring the donor or the acceptor) and Lorentz-type lines of one-particle states, which correspond to the bound propagation of the CTE and the phonon.     

Vibrational energy transfer in a protein molecule

Mode coupling in a protein molecule was studied by a molecular dynamics simulation of the intramolecular vibrational energy transfer in myoglobin at near zero temperature. It was found that the vibrational energy is transferred from a given normal mode to a very few number of selective normal modes. These modes are selected by the relation between their frequencies, like Fermi resonance, governed by the third order mode coupling term. It was also confirmed that the coupling coefficients had high correlation with how much the coupled modes geometrically overlapped with each other.     

Coherent molecular vibrational dynamics of CH2 stretching modes in polyethylene studied by femtosecond‐CARS

We have studied the coherent molecular vibrational dynamics of CH₂ stretching modes in polyethylene by time‐resolved femtosecond coherent anti‐Stokes Raman spectroscopy. We observed that the coherent vibrational relaxation of symmetric CH₂ stretching modes in polyethylene at room temperature is much faster than that previously measured in polyvinyl alcohol. In addition, it was detected that, at low temperature, the coherent vibrational relaxation of the symmetric stretching modes evidently becomes slower compared with that at room temperature. These temperature‐dependent measurements enable us to discriminate the contribution of pure dephasing mechanism, due to phonons and two‐level systems in polymer, from the contribution of lifetime of the vibrational excited state to the coherent vibrational relaxation of CH₂ stretching modes. We conclude that the coherent vibrational relaxation of symmetric CH₂ stretching modes at room temperature consists of the contribution of lifetime and approximately 1.5 times larger contribution of pure dephasing. Copyright © 2015 John Wiley & Sons, Ltd.     

Coherent coupling between vibrational modes of C-H bonds at different positions studied by femtosecond time-resolved coherent anti-Stokes Raman scattering

We performed femtosecond time-resolved coherent anti-Stokes Raman scattering(fs-CARS) measurements on liquid toluene and PVK film.For both samples,we selectively excited the CH stretching vibrational modes and observed the expected quantum beat signals.The frequency of the well-defined beats is in good agreement with the energy difference between the two simultaneously excited modes,which demonstrates that a coherent coupling between the vibrational modes of the C-H chemical bonds exists at the different positions of the molecules.The dephasing times of the excited modes are obtained simultaneously.     

Coherent coupling between vibrational modes of Cben H bonds at different positions studied by femtosecond time-resolved coherent anti-Stokes Raman scattering

We performed femtosecond time-resolved coherent anti-Stokes Raman scattering (fs-CARS) measurements on liquid toluene and PVK film. For both samples, we selectively excited the CH stretching vibrational modes and observed the expected quantum beat signals. The frequency of the well-defined beats is in good agreement with the energy difference between the two simultaneously excited modes, which demonstrates that a coherent coupling between the vibrational modes of the C-H chemical bonds exists at the different positions of the molecules. The dephasing times of the excited modes are obtained simultaneously.     

Manifestations of charged lattice defects in excitonic luminescence and control over properties of wide-band scintillation crystals

A fast energy transfer from the host crystal to impurity centres and charged lattice defects (e.g., vacancies in an ionic crystal) is due to the two-site exciton motion on high vibrational levels. At low temperatures this motion occurs in a coherent directional way with the sound velocity whereas a small separation between vibrational levels provides an easy exciton trapping by shallow potential wells near impurity centres. Charged defects have a much larger trapping section than isovalent impurity centres and manifest themselves in luminescence at a concentration smaller by two orders of magnitude.     

Highly localized vibronic wavepackets in large reactive molecules

The ultrafast dynamics of the internal conversion of S₁ azulene and the excited-state intramolecular proton transfer in 2-(2^′-hydroxyphenyl)benzothiazole (HBT) were investigated by pump–probe spectroscopy with tunable pulses as short as 20 fs. In both cases we find very pronounced oscillatory contributions to the transients, which are due to vibrational wavepacket motion in the excited state. The damping times are on the order of 1 ps even for these large reactive molecules in solution at room temperature. For azulene only 2 out of 48 vibrational modes participate and in HBT only 4 out of 69. This high degree of localization of the wavepacket seems to be a general feature, and supports hopes that even for systems of chemical interest coherent control might be possible. Received: 24 January 2000 / Published online: 24 July 2000     

Effectiveness of charge separation from the long-lived second excited state of donors

In molecular zinc-porphyrin-based donor–acceptor systems, the electron transfer from the second singlet excited state S₂ is accompanied by ultrafast recombination into the first excited state, resulting in a low quantum yield of the thermalized charge-separated state (20%). It is demonstrated that the quantum yield of ultrafast charge separation in donor–acceptor triads D–A₁–A₂ can be close to 100% in molecular systems with lifetimes of the S₂ state longer than 150 ps. As prototypes of such systems, donor–acceptor diads D–A₁ and triads D–A₁–A₂ are considered, wherein the xanthione molecule plays the role of a donor. The ranges of the model parameters are determined in which the efficiency of charge separation is high. The twostage photoinduced charge transfer is studied within the framework of a multichannel stochastic model that takes into account the reorganization of a polar solvent and a high-frequency intramolecular vibrational mode.     

Influence of intramolecular vibrations in charge redistribution at the pentacene-graphite interface

We have investigated the relation between the intramolecular vibrational modes of pentacene and the charge redistribution at the pentacene-graphite interface by using high-resolution electron-energy-loss-spectroscopy. The three main vibrational peaks shift to lower energies as the pentacene film thickness decreases. In order to discuss this energy shift, we have calculated the vibrational energies of a free pentacene molecule by changing its charge state. We have also calculated the vibrational energies of a pentacene molecule adsorbed on a graphite sheet by changing the pentacene-graphite distance. Taking the experimental and calculation results into account, we conclude that the observed energy shifts result from an intramolecular charge redistribution. The present results indicate that the effect of an intramolecular charge redistribution is essential to discuss the origin of an energy shift observed in a vibrational study of an organic molecule/substrate interface.     

Mediation of long range charge transfer by Kondo bound States

We present a theory of nonequilibrium long range charge transfer between donor and acceptor centers in a model polymer mediated by magnetic exciton (Kondo) bound states. Our model produces electron tunneling lengths easily exceeding 10 A, as observed recently in DNA and organic charge transfer systems. This long ranged tunneling is effective for weak to intermediate donor-bridge coupling, and is enhanced both by weak to intermediate strength Coulomb hole-electron attraction (through the orthogonality catastrophe) and by coupling to local vibrational modes.     

Non-linear mode coupling in symmetrically kinked bars

A theoretical and experimental study of energy transfer between the vibrational modes of a symmetrically kinked bar with clamped ends is described. Two non-linear mechanisms responsible for energy transfer from one mode to another at twice the frequency are identified. The first arises from the interaction between shear and tensional forces at the kink and the second from unbalanced moments across the kink. In the system studied, the first of these mechanisms is dominant. A further related mechanism is responsible for energy transfer to modes at three times the base frequency. When a kinked bar with mode frequencies of a few hundred hertz is shaped so that two modes have the desired 2 to 1 frequency relation and is excited by striking it at a node of the higher mode, then the amplitude of that mode rises from zero to a maximum in a time of order 0.1 s and then decays. Theory and experiment are in quite good agreement in relation to the time delay to the maximum amplitude and the magnitude of this maximum. The results contribute to an understanding of the vibrational behaviour of certain musical gongs and are also relevant to other systems.