Thermodynamics of protonation of amino acid carboxylate groups from 50 to 125°C

Flow calorimetry has been used to study the interaction of glycine, DL--alanine, DL-2-aminobutyric acid, -alanine, 4-aminobutyric acid, and 6-aminocaproic acid with protons in aqueous solutions from 323.15 K to 398.15 K and at 1.52 MPa. LogK, H°, S°, and C _p ^° for the protonation of the carboxylate groups of these amino acids have been obtained at each temperature studied. Equations are given expressing these values as functions of temperature. The protonation reactions are exothermic at lower temperatures and become endothermic as temperature increases. The logK, H°, and S° values are close together over the temperature range studied for the protonation of -amino acids, i.e., glycine, DL--alanine, and 2-aminobutyric acid. At each temperature, the magnitudes of these thermodynamic quantities increase as the number of methylene groups between the amino group and the carboxylate group increases. The C _p ^° value for the protonation of the carboxyl group is found to lie between those of an isocoulombic reaction and a charge reduction reaction. At 323.15 K, the protonation reactions of the carboxylate groups have larger C _p ^° values which approach those associated with charge reduction reactions. As the temperature increases, C _p ^° decreases and approaches those found for isocoulombic reactions. This result is explained by considering long-range and short-range solvent effects. The trend in H° and S° with temperature and with charge separation in the zwitterions is interpreted in terms of solvent-solute interactions and the electrostatic interaction of the two oppositely charged groups within the molecule.     

Thermochemistry of aqueous solutions of alkylated nucleic acid bases V. Enthalpies of hydration of N-methylated adenines

Enthalpies of solution in water, H _sol ^o , and of sublimation, H _subl ^o , were determined experimentally for a number of crystalline N-methyl adenines: m⁶Ade, m ₂ ^6,6 Ade, m⁹Ade, m ₂ ^6,9 Ade, and m ₃ ^6,6,9 Ade. Derived standard enthalpies of hydration H _hydr ^o , were corrected for the calculated cavity terms H _cav ^o to yield enthalpies of interaction H _int ^o of the solutes with their hydration shells. The increments of H _int ^o per unit area of the water-accessible molecular surface S _B , H _int ^o (CH₃)/S _B (CH₃), for the particular methyl groups: is considered to be the net effect of the gain in the energy resulting from van der Waals' interactions and of the loss in the energy due to polar interactions upon methyl substitution. It proved to vary somewhat numerically in agreement with the theoretically predicted hydration schemes of adenine. Comparison of H _int ^o /S _B value for adenine with those previously determined for uracil and thymine indicates that the aminopurine moiety is less hydrated than the diketopyrimidine ring.     

Thermodynamic quantities for the protonation of amino acid amino groups from 323.15 to 398.15 K

Flow claorimetry has been used to study the interaction of protons with glycine, DL--alanine, -alanine, DL-2-aminobutyric acid, 4-aminobutyric acid, and 6-aminocaproic acid in aqueous solutions at temperatures from 323.15 to 398.15 K. By combining the measured heats for amino acid solutions titrated with NaOH solutions with the heat of ionization for water, the log K, H^o, S^o, and C_p ^o values for the protonation of the amino groups of these amino acids have been obtained at each temperature studied. Equations are given expressing these values as functions of temperature. The H^o and S^o values increase while log K values decrease as temperacture increases. The trends for log K, H^o, S^o, and C_p ^o are discussed in terms of changes in long-range and short-range solvent effects. The trend in H^o, S^o, and C_p ^o values with temperature and with charge separation in the zwitterions is interpreted in terms of solvent-solute interactions and the electrostatic interaction between the two oppositely charged groups within the molecule.     

Determination of enthalpy of ionization of water from 250 to 350° C

The enthalpy changes at zero ionic strength (H°) for the ionization of water (H₂O=H⁺+OH^–) were determined by flow calorimetry from the heats of mixing of aqueous NaOH and HCl solutions in the temperature range 250 to 350°C. Pitzer ion-interaction models developed by other workers were used to calculate enthalpies of dilution of aqueous NaOH, HCl, and NaCl solutions for the extrapolation of H values from the conditions of the experiment to infinite dilution. Equations are derived for thermodynamic quantities (log K, H°, S°, C _p ^° and V°) for the ionization of water using the H° values determined in this study from 250 to 350°C and literature log K and H° values from 0 to 225°C. Smoothed values of log K, H°, S°, C _p ^° , and V° are presented at rounded temperatures from 0 to 350°C and at the saturation pressure of water for each temperature. The equations in the present study provide a better representation of experimental thermodynamic data from 0 to 350°C than the Marshall-Franck equation.     

Solubility of inert gases and liquid hydrocarbons in water

The thermodynamic statistical model based on the distribution of molecular populations among energy levels has been employed for the analysis of the solubility of hydrocarbons and other inert gases or liquids in water at different temperatures. The statistical distribution is described by a convoluted partition function Z_G·_s. The product of a grand canonical partition function Z_G represents the distribution of the species in the reaction while the canonical partition function Z_G represents the properties of the solvent. The first derivative of the logarithm of the partition function with respect to 1/T is the apparent enthalpy which is the result of the contributions of the separate partition functions, {H_aap}_T=H^o+n_wC_p,wT, where {H_app}_T refers to Z_G, n_wC_p,wT=–H_w to _s, and H^o is the change in enthalpy of hydrocarbon-water reaction. The plot {H_app}_T vs/ T results in a straight line with slope n_w at constant C_p,w. The apparent enthalpy is obtained from the coefficients of the polynomial fitting of the solubility data, as a function of 1/T. Alternatively, the apparent enthalpy can be determined calorimetrically. The enthalpy thus obtained is a linear function of the Kelvin temperature. The values of n_w range from 1.6, 1.9, 5.6 to 5.8 for helium, hydorgen, butane and hexane, respectively. For fluorocompounds the range of n_w is 10.1 to 11.1 indicating that n_w is a function of the number of water molecules expelled from the cage of solvent to form a cavity to host the solute molecule. The analysis of several sets of calorimetric or solubility data with the present molecular thermodynamic model yields values of H^o and n_w consistent with the size of the dissolved molecules.List of Symbols p pressure - H _ij average enthalpy - H _i level enthalpy (=H) - H _i enthalpy difference - H _ij intersublevel energy difference - i index of level - j index of sublevel - Z_G grand canonical partition function - _S canonical partition function - Z_G- convoluted partition function - –G ^o/RT standard Gibbs energy normalized toRT - –H ^o/RT standard enthalpy normalized toRT - S ^o/R standard entropy normalized toR - C _p molar heat capacity - T absolute temperature - H _G- enthalpy of the convoluted ensemble - H _G enthalpy of the solute - H enthalpy of the solvent - H _app apparent enthalpy - H _w enthalpy of water - C_yH_z hydrocarbon - W water - K _s solubility equilibrium constant - x ₂ molar fraction of solute - C_yH_zW_(x-nw) hydrocarbon molecule trapped in a cavity - K _H Henry constant - P _s solubility product - [W] concentration of water - reference temperature - a, b, c, d coefficients of the fitting polynomial - {H _app}_T apparent enthalpy at temperatureT - {H }_T standard enthalpy at temperatureT - {H _w}_T water contribution to enthalpy at temperatureT - C _p,w isobaric molar heat capacity of water - L Ostwald coefficient - C _p isobaric heat capacity difference - Bunsen coefficient - C _p,app apparent isobaric heat capacity difference - n _C number of carbon atoms in the chain - h _w interaction enthalpy of one water molecule - H ₀ intercept for the extrapolated enthalpy     

Diffuse reflectance spectroscopic studies of supported molybdenum oxide catalysts for propene metathesis

Diffuse reflectance spectra of 10 wt.% MoO₃ supported on -Al₂O₃ and SiO₂ have been measured after various steps of treatment. -Al₂O₃ was pretreated by 0.05 and 1.0 wt.% KOH. The comparison of spectral data and catalytic properties allows to predict the optimal oxidation state of molybdenum ions in surface clusters (approximately Mo⁵⁺), necessary to obtain supported MoO₃ catalysts for propene metathesis with high activity and selectivity.

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, -Al₂O₃ SiO₂ 10% . . -Al₂O₃ 0,05% 1,0% KOH. ( Mo⁵⁺), .

     

Thermodynamics of protonation of AMP,ADP, and ATP from 50 to 125°C

The interaction of adenosine 5-monophosphate (AMP), adenosine 5-diphosphate (ADP), and adenosine 5-triphosphate (ATP) ions with protons in aqueous solution has been studied calorimetrically from 50 to 125°C and 1.52 MPa. At each temperature, the reaction of acidic AMP with tetramethylammonium hydroxide was combined with the heat of ionization for water to obtain the enthalpy of protonation of AMP, while the reactions of HCl with deprotonated tetramethylammonium salts of ADP and ATP were used to obtain the enthalpies of protonation of ADP and ATP. Equilibrium constant K, enthalpy change H^o, entropy change S^o, and heat capacity change C _p ^o values were calculated for the stepwise protonation reactions as a function of temperature. The reactions involving the first protonation of AMP, ADP, and ATP and the third protonation of ADP and ATP were endothermic over the temperature range studied, while that involving the second protonation is exothermic for AMP and ADP, but is exothermic below 100°C and endothermic at 125°C in the case of ATP. Consequently, log K values for the first and third protonation reactions (phosphate groups) increase while those for the second protonation reaction (N₁-adenine) decrease in the cases of AMP and ADP and go through a minimum in the case of ATP as temperature increases. The H^o values for all protonation reactions increase with temperature. The magnitude and the trend for the H^o, S^o, and C _p ^o values with temperature are discussed in terms of solvent-solute interactions. The magnitude of the C _p ^o values for the second protonation is consistent with little interaction between the phosphate ion and the protonated N₁ site of the adenine moiety in AMP, but indicates moderate interaction between these groups in ADP, and strong interaction in ATP.     

Acid properties of some phosphonocarboxylic acids

Thermodynamic acid dissociation constants were determined for phosphonoacetic acid (PAA) in aqueous solution at 25°C by coulometric titrations at different ionic strengths and extrapolation of the results to I=0. The respective values are pK₁2.0, pK₂=5.11±0.04, and pK₃=8.69±0.05. The enthalpy and entropy of dissociation for the second and the third dissociation steps, determined from the temperature dependence of pK's, are H ₂ ^o =0.2±0.3 kcal-mole^–1, S ₂ ^o =22.6±0.9 e.u., H ₃ ^o =1.3±0.4 kcal-mole^–1, and S ₃ ^o =11.7±0.4 e.u. Phosphorus-31 and carbon-13 NMR studies of PAA solutions as a function of pH gave the deprotonation sequence of the triacid. Acidity constants were also determined for phosphonoformic acid, 2-phosphonopropionic acid, and 3-phosphonopropionic acid at an ionic strenght of 0.05.To whom correspondence should be addressed.     

Enthalpies of solution of thymine and uracil in water and dimethylsulfoxide

Enthalpies of solution of thymine and uracil in water and in dimethylsulfoxide (DMSO) were measured calorimetrically in the temperature range 25–40°C. H _s ^o at 25°C for thymine and uracil in water were found to be 23.1±0.5 and 29.5±0.3 kJ-mol^–1, respectively. In DMSO, H _s ^o were 7.9±0.1 and 10.2±0.1 kJ-mol^–1, respectively. In aqueous solution C _p ^o for the two nucleic acid bases were relatively large and positive with C _p ^o of thymine being larger. Both transfer quantities H _t ^o and C _p,t ^o for the proceses H₂ODMSO for the two nucleic acid bases were negative. It is proposed that, the differences in the values obtained for the two bases is due principally to increased order in the water adjacent to the methyl group in thymine.     

The position of plutonium/III/ in the lanthanide series in respect to thermodynamic functions of complex formation with nitrates and thiocyanates

The position of Pu/III/ within lanthanides in respect to G⁰, H⁰ and S⁰ of complex formation with nitrate and thiocyanate ligands was determined by the extraction method. It was found that in respect to G⁰, Pu/III/ is a light pseudolanthanide for nitrate ligands and a heavy pseudolanthanide for thiocyanate ligands. A comparison of the positions of Pu/III/ and Am/III/ in respect to G⁰, H⁰ and S⁰ shows that the radius of plutonium is greater than that of americium in the An/NO₃/ ₅ ^2– complex and smaller in the An/NCS/₃/TBP/_n complex. The increase in the radii between plutonium and americium in the thiocyanate complex points out to a contribution from 5f orbitals to bonding.     

Strain Energies of α-Alkylsubstituted Styrenes, 1,1-Di-phenyl-ethene,Tri-, and Tetra-phenyl-ethene

The standard (p° = 0.1 MPa) molar enthalpies of formation _fH°_m (1 or cr) at the temperature T = 298.15 K were determined by using combustion calorimetry for -ethyl-styrene (A), -iso-propyl-styrene (B), -tert-butyl-styrene (C), 1,1-di-phenyl-ethene (D), tri-phenyl-ethene (E), and tetra-phenyl-ethene (F). The standard molar enthalpies of vaporization _l ^g H°_m or sublimation _cr ^g H°_m of compounds A to F were obtained from the temperature variation of the vapor pressure measured in a flow system. Molar enthalpies of fusion _cr ^l H°_m of solid compounds were measured by d.s.c. Resulting values of _fH°_m (g) were obtained at the temperature T = 298.15 K and used to derive strain enthalpies of phenylalkenes. The interactions of the substituents are discussed in terms of deviations of _fH°_m (g)from the group additivity rules. These values provide a further improvement on the group-contribution methodology for estimation of the thermodynamic properties of organic compounds.     

Heats of solution of 1∶1 electrolytes in 1-propanol,and derived enthalpies of transfer from water

Heats of solution of 13 11 electrolytes in 1-propanol have been determined calorimetrically at various electrolyte concentrations, and extrapolated to zero concentration to give H _s ^o values for these electrolytes. Together with literature data on three additional 11 electrolytes, these measurements yield a self-consistent set of single-ion enthalpies of transfer from water to 1-propanol. Values are tabulated for 10 univalent cations and five univalent anions. It is shown that the H _t ^o (Ph ₄ As⁺)=H _t ^o (Ph ₄ B^–) assumption yields chemically reasonable single-ion values. Using this assumption, it may be deduced that all the univalent ions studied have about the same enthalpy in 1-propanol as in methanol.     

Rates of Dissociative Ionic Reactions in Aqueous Mixtures Correlated with Opposing Gibbs Energies of Transfer of Single Ions: Solvolysis of Chloropentacyanocobaltate(III) Anions in Water + Ethanol and Water + Urea

The kinetics of the solvolysis of Co(CN)₅Cl^3– have been investigated in water with an added structure former, ethanol, and with added urea, which has only a weak effect on the solvent structure. As this solvolysis involves a rate-determining dissociative step corresponding closely to a 100%; separation, Co³⁺ Cl^-, in the transition state, a Gibbs energy cycle relating Gibbs energies of activation in water and in the mixtures to Gibbs energies of transfer of individual ionic species between water and the mixtures, G _t ^o (i), can be applied. The acceleration of the reaction found with both these cosolvents results from the compensation of the retarding positive G _t ^o (Cl^- by the negative term [G _t ^o [Co(CN) ₅ ^2- ]-G _t ^o [Co(CN)₅Cl^3- arising from G _t ^o [Co(CN)₅Cl^3-]> G _t ^o [Co(CN) ₅ ^2- ]. Moreover, only a small tendency to extrema in the enthalpies and entropies of activation is found with both these cosolvents, as was also found with added methanol or ethane-1,2-diol, but unlike the extrema found when hydrophobic alcohols are added to water. With the latter, much greater negative values for G _t ^o [Co(CN) ₅ ^2- ]- _t ^o [Co(CN)₅Cl^3-] are found. When G G _t ^o [Co(CN) ₅ ^2- ]-G G _t ^o [CO(CN)₅Cl^3-] becomes low enough not to compensate for the positive G _t ^o (Cl^-), as with added hydrophilic glucose, the reaction is retarded. Compensating contributions of the various G _t ^o (i) involved in the Gibbs energy cycle with added methanol or ethane-1, 2-diol allow log (rate constant) to vary linearly with the reciprocal of the relative permittivity of the medium.     

Nonadiabatic transitions at the limit of almost-adiabatic perturbations with random motion along the terms

Conclusions The investigation carried out has shown that in the diffusion approximation, which is valid when the effective length of the free path =v_ov is much smaller than the dimension of the nonadiabatic region, an adiabatic limit is achieved only under the condition v_v 1. This case cannot be described when (4) is assumed to be valid for , since this equation is fulfilled only when v_v 1. It is perfectly natural that the use of Eq. (4) produces a strong interaction between the terms of the quantum subsystem, i.e., we do not attain an adiabatic limit. In the work it was shown that at the adiabatic limit the rate of transitions between the terms decreases rapidly with increasing v_v.The condition v_v 1 strongly restricts the region for the applicability of (4) and, therefore, of (12). In this sense, expression (21) is a significant generalization of (14), since it was obtained only under the. assumption and V_D 1. However, the range of parameters which satisfy these inequalities corresponds to a fairly narrow group of processes; therefore, it would be of interest to also investigate the region of a. This question will be the subject of the next report.Translated from Teoreticheskaya i Éksperimental'naya Khimiya, Vol. 17, No. 1, pp.3–9, January–February, 1981.In conclusion, we express our sincerest thanks to I. V. Aleksandrov, S. Ya. Umanskii, and M. Ya. Ovchinnikova for numerous and useful discussions.     

On the nature of surface sites for heterolytic dissociation of hydrogen on Al2O3

A quantum-chemical analysis of the models for geminal OH groups of Al₂O₃ and of the processes of their dehydroxylation with further dissociative chemisorption of hydrogen has been carried out. Calculations were performed by the SCF MO LCAO method using STO-3G basis set in terms of the cluster approach.

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OH- Al₂O₃ . , STO-3G .

     

High precision retention time measurements in gas chromatography. I. A simple differentiating time printer for large sample sizes

Summary A differentiating time printer (DTP) apparatus has been constructed from standard laboratory equipment by connecting a differentiating CR circuit via an operational amplifier to an electronic temperature regulator that triggers the print out of a line frequency driven register. The electronic resolution is 0.1 s, giving a relative standard deviation _rel, which is determined by the stability of the line frequency at sufficiently long retention times. In Lund this corresponds to a best _rel = 0.02% and to a mean _rel = 0.03%. For late and broad peaks in real GC the noise caused the print-out of extra time values, especially with fronting peaks from ordinary 1/8 columns. However, a comparison with the simultaneously recorded chromatograms was generally sufficient to pick out the proper retention times. For large sample sizes the corrected retention time t increased with peak height, the later the peak in the chromatogram. The In t _n+1 /t _n values from a series of n-paraffins showed good linear correlations with peak height h_n+1 and peak area A_n+1, giving standard deviations around the line approaching that expected from _rel. The accuracy of the system was mainly determined by the effect of a non-zero triggering level on the derived signal and by the time displacement expected from a large time constant. A rough estimate of the time error was made by simulating GC peaks with a cosine wave generator.     

Model calculations of changes of thermodynamic variables for the transfer of nonpolar solutes from water to water-d2

A recently introduced modified hydration shell hydrogen bond model for rationalizing the thermodynamic consequences of hydrophobic hydration is adapted for use with heavy water. The required adjustment of parameters employs the assumption that breaking hydrogen bonds in water-d₂ involves a greater enthalpy change and a larger entropy increase than bond breaking in ordinary water. It also makes some use of information derived from studies of gas solubilities in the two solvents, although a review of the data leads to serious questions about the reliability of results obtained in this way. The model permits calculations of hydrogen bonding contributions to the changes, G _t ^o , H _t ^o , S _t ^o , and C _p,t ^o , for transfer of nonpolar solutes from water to water-d₂ and implies that such data should show regular trends. Although some of the numerical results depend strongly on the values chosen for the parameters, the pattern defined by these trends is nearly independent of parameters. Predicted values of C _p,t ^o are large and positive for all nonpolar solutes, while S _t ^o is expected to be negative near 0°C, becoming progressively less negative on warming and eventually positive. Both of these quantities should be proportional to the molecular surface area of the solute. Analogous predictions regarding G _t ^o and H _t ^o can also be made, but only if it is permissible to neglect possible contributions to these quantities from van der Waals interactions.     

First and second thermodynamic mixing properties of ethylbenzene +n-alkanes: Experimental and theory

Isobaric expansibilities _P and isothermal compressibilities _T have been determined at 25 and 45°C for binary mixtures of ethylbenzene + n-tetradecane and + n-hexadecane and the corresponding excess functions (V ^E /T)_P and (V ^E /P)_T have also been obtained. With these data and supplementary literature values, the following second order mixing properties are also reported at 25°C: _S ^E , (V ^E /P)_T, C_V and (VT). All mixing quantities have been compared with the results obtained at 25°C by using the Prigogine-Flory-Patterson theory of liquid mixtures. The predicted values suggest that the ability of ethylbenzene as a breaker of the pure n-C_n orientations is similar to what we found for toluene and higher than for p-xylene.     

Kinetics of ammonia decomposition of polycrystalline rhodium at pressures between 0.013 and 103 kPa

The rates of ammonia decomposition on polycrystalline Rh wires between 600 and 1800 K and at pressures between 13.3 Pa and 103 kPa were measured and fitted with a Langmuir-Hinshelwood unimolecular reaction rate expression. At high temperatures and pressures the reaction seems to be mass transfer controlled.

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Rh 600–1800 K 13,3 –103 . , -. .

     

Effect of intramolecular rotational reorganization of reagents on the ratio between free energies of activation and reaction

Conclusions The relationship between the free energies of activation G and reaction G_o for proton transfer processes have been analyzed, taking into account the effect of hindered rotation of the reagents. We have shown that the considered effect can considerably affect the shape of the G=f(G_o) curve.Translated from Izvestiya Akademii Nauk SSSR, Seriya Khimicheskaya, No. 1, pp. 77–81, January 1989.