基态MgB2分子的结构与分析势能函数

应用群论及原子分子反应静力学方法推导MgB₂分子的电子状态及其离解极限,采用密度泛函B3LYP和从头计算QCISD方法在6-311++G**基组水平上,对MgB₂分子可能的状态进行优化计算,得出MgB₂的三重态能量最低,其稳定构型为C_2v,平衡核间距R_e=2.2977,键角α_BMgB=41.5521°,能量为-248.9645a.u.同时还计算了基态的简正振动频率:对称伸缩振动频率ν（B₂）=315.4430 cm^-1,反对称伸缩振动频率ν（A₁）=418.1883 cm^-1和弯曲振动频率ν（A₁）=968.9672 cm^-1.在此基础上,使用多体项展式理论方法,导出了基态MgB₂分子的解析势能函数,其等势面准确再现了基态MgB₂平衡结构和离解能,并由此讨论了B+MgB和Mg+BB分子反应的势能面静态特征. 关键词： 2')" href="#">MgB₂ 多体项展式理论 解析势能函数     

Theoretical studies on the SiC radical: electronic structure, spectroscopy and spin-orbit couplings

The potential energy curves (PECs) of twenty-five ??-S states and twenty ?? states generated from eight ??-S states of the SiC radical are calculated by using an ab initio quantum chemical method. The PEC calculations are performed for internuclear separations from 0.10 to 1.00 nm using the complete active space self-consistent field method, which is followed by the internally contracted multireference configuration interaction (MRCI) approach in combination with a correlation-consistent aug-cc-pV6Z basis set. To improve the quality of the PECs, core-valence correlation and relativistic corrections are included. Core-valence correlations are included using a cc-pCVTZ basis set. Relativistic corrections are calculated using the third-order Douglas-Kroll Hamiltonian approximation at the level of cc-pV5Z basis set. The spin-orbit coupling effect is accounted for by the Breit-Pauli Hamiltonian in combination with the aug-cc-pVTZ basis set. To obtain more reliable results, the PECs determined by the MRCI calculations are corrected for size-extensivity errors by means of the Davidson modification. The PECs are extrapolated to the complete basis set (CBS) limit by the total-energy extrapolation scheme. The spectroscopic parameters are obtained by fitting the vibrational levels, which are calculated by solving the ro-vibrational Schr?dinger equation using the Numerov??s method. The spectroscopic results are compared with those reported in the literature. Excellent agreement has been found between the present results and the measurements. The vibrational manifolds of the first 30 vibrational states are calculated for each electronic state of the non-rotating radical. Comparison with the measurements demonstrates that the present results are accurate. The spectroscopic parameters and the molecular constants reported here are expected to be reliable predicted results.     

Synthesis,experimental and theoretical analysis,and antiproliferative activity of 2-(4-methoxyphenylamino)-2-oxoethyl methacrylate

In this study 2-(4-methoxyphenylamino)-2-oxoethyl methacrylate (MPAEMA) has been synthesized and characterized experimentally (FTIR, NMR). Theoretically, physical, electronic and vibrational properties of MPAEMA molecule have been investigated using density functional theory (DFT) calculations at B3LYP/6-311++G(d,p) basis set. Bond distance, FTIR spectrum, NMR spectra and vibrational frequencies have been carried out. The calculated FTIR and NMR spectra of the headline molecule from the DFT have been compared with the measured ones, and good results have been obtained. UV spectrum characteristics and the electronic properties, like frontier orbitals, and band gap energy of MPAEMA have also been recorded by time-dependent (TD-DFT) method based on optimized structure with different solvent. The experimental results have been compared with theoretical values. Both experimental and theoretical methods have shown that the compound has successfully been synthesized. Cytotoxicity of MPAEMA has been investigated by XTT cell proliferation assay. IC50 values of MPAEMA have been identified as 1.8 mM on HeLa cell line.     

Beryllium oxide (BeO) nanotube provides excellent surface towards adenine adsorption: A dispersion-corrected DFT study in gas and water phases

Zigzag (5, 0) BeO nanotube (BeONT) has been examined in detail towards adsorption properties of adenine nucleobase on its surface via D2-DFT calculation method in the gas and water phases. A detailed surface study reveals that there are four orientations for nucleobase adsorption that none of the vibrational spectrums demonstrated imaginary frequency, recognizing that all of the relaxed structures are at the minimum of energy. The minimum and maximum adsorption energies are both in chemisorption regime with calculated values of −140 (−118 BSSE corrected) and −191 (−168 BSSE corrected) in the gas phase, and −181 and −310 kJ/mol in the water phase, using meta-hybrid functional (ꞷB97XD) and 6-31G** basis set. For all positions, BeONT showed p-type semiconducting property because of receiving electronic charge from adenine molecule. Our findings suggest that BeONT could be used as a possible strong carrier for adenine molecule in practical applications.     

Molecular structure,spectroscopic properties (FT-IR,Micro-Raman,and UV-vis), and DFT calculations of minaprine

Molecular geometry, experimental vibrational wavenumbers, electronic properties, and quantum chemical calculations of minaprine (C₁₇H₂₂N₄O · 2HCl), (with synonym, dihydrochloride salt of N-(4-methyl-6-phenyl-3-pyridazinyl)-4-morpholineethamine) which is widely used as a psychotropic drug at medicinal treatment, in the ground state by using density functional theory (DFT/B3LYP) method with 6–31++G(d,p) basis set have been presented for the first time. The comparison of the observed fundamental vibrational frequencies were in a very good agreement with the experimental data. Furthermore, UV-vis TD-DFT calculations, the highest occupied molecular orbitals (HOMO-1, HOMO), lowest unoccupied molecular orbitals (LUMO, LUMO + 1), molecular electrostatic potential (MEP) surface, atomic charges and thermodynamic properties of minaprine molecule have been theoretically calculated and simulated at the mentioned level.     

Scaled Quantum Chemical Studies of the Molecular Structure and Vibrational Spectra of Minoxidil

The Fourier transform Raman and Fourier transform infrared spectra for minoxidil have been recorded in the region 4000—100 cm^?1 and 4000—450 cm^?1, respectively. The structural and spectroscopy data of the molecule in the ground state were calculated by using density functional theory methods with 6-311G (d, p) basis set. A detailed vibrational analysis of the title compound has been done using normal coordinate analysis following the scaled quantum mechanical force field methodology. The calculated molecular geometry parameters and scaled vibrational wavenumbers are well compared with the experimental data. The electronic properties, such as excitation energies, absorption wavelength, highest occupied molecular orbital (HOMO), and lowest unoccupied molecular orbital (LUMO) energies were performed by time-dependent density functional theory approach, and the results are in good agreement with experimental absorption spectrum. The charge delocalizations of these molecules have been analyzed using natural bond orbital analysis. The molecule orbital contributions are studied by density of energy states. Fukui functions, local softness, and electrophilicity indices for selected atomic sites of the title compound are determined. Finally, the thermal behaviors of the compound have been calculated by different temperature.     

Chemisorbed hydrogen: Electron scattering,resonance levels,and vibration frequency

Several physical properties of atomic hydrogen chemisorbed on tungsten are computed on the basis of our earlier density functional calculations. The differential scattering cross-section of 50–100 eV electrons by a chemisorbed hydrogen atom is computed and compared with that of an isolated hydrogen atom. The relevance of this cross-section to LEED experiments is discussed. An electronic resonance level associated with the hydrogen atom is found at 5.6 eV below the Fermi level, in very good agreement with recent photo-emission data. The vibrational excitation energy perpendicular to the metal plane is calculated to be 200 meV, compared to the observed 140 meV.     

Density functional theory study on Ni-doped MgnNi (n=1-7) clusters

The possible geometrical and the electronic structures of small MgnNi(n = 1-7) clusters are optimised by the density functional theory with a LANL2DZ basis set.The binding energy,the energy gap,the electron affinity,the dissociation energy and the second difference in energy are calculated and discussed.The properties of Mg n Ni clusters are also discussed when the number of Mg atom increases.     

On the convergence of zero-point vibrational corrections to nuclear shieldings and shielding anisotropies towards the complete basis set limit in water

ABSTRACT

The method and basis set dependence of zero-point vibrational corrections (ZPVCs) to nuclear magnetic resonance shielding constants and anisotropies has been investigated using water as a test system. A systematic comparison has been made using the Hartree–Fock, second-order Møller–Plesset perturbation theory (MP2), coupled cluster singles and doubles (CCSD), coupled cluster singles and doubles with perturbative triples corrections (CCSD(T)) and Kohn–Sham density functional theory with the B3LYP exchange-correlation functional methods in combination with the second-order vibrational perturbation theory (VPT2) approach for the vibrational corrections. As basis sets, the correlation consistent basis sets cc-pVXZ, aug-cc-pVXZ, cc-pCVXZ and aug-cc-pCVXZ with X = D, T, Q, 5, 6 and the polarisation consistent basis sets aug-pc-n and aug-pcS-n with n = 1, 2, 3, 4 were employed. Our results show that basis set convergence of the vibrational corrections is not monotonic and that very large basis sets are needed before a reasonable extrapolation to the basis set limit can be performed. Furthermore, our results suggest that coupled cluster methods and a decent basis set are required before the error of the electronic structure approach is lower than the inherent error of the VPT2 approximation.     

DFT studies on the vibrational and electronic spectra of acetylsalicylic acid

The following is a theoretical and experimental study on the vibrational and electronic properties of acetylsalicylic acid (ASA). Vibrational information was obtained by FT-IR and Raman spectroscopy which agree well with harmonic vibrational frequency calculations. The calculations were carried out using density functional theory B3LYP methods with 6-311G** and LANL2DZ basis sets. The vibrational assignments were calculated by Gaussview. Absorption UV-Vis experiments of ASA reveal three maximum peaks at 203, 224 and 277 nm, which are in agreement with calculated electronic transitions using TD-B3LYP/6-311G**.     

Copper(II) and nickel(II) complexes of tetradentate Schiff base ligand: UV-Vis and FT-IR spectra and DFT calculation of electronic,vibrational and nonlinear optical properties

The experimental fourier transform infrared (FT-IR) and ultraviolet-visible (UV-Vis) spectra of copper(II) and nickel(II) complexes of the deprotonated tetradentate Schiff base ligand N,N′-bis(2-hydroxybenzylidene)-2,2-dimethyl-1,3-propanediamine (H₂L) are compared with their corresponding theoretical ones. The applied theoretical method is based on the density functional theory and time-dependent density functional theory at the UPBE0/PBE0 levels using Def2-TZVP basis set. The computational optimised geometric parameters of the complexes are in good agreement with their corresponding experimental data. The FT-IR and UV-Vis spectra of the complexes were reproduced on the basis of their optimised structures. The vibrational assignments of some fundamental modes of the complexes are performed. The highest occupied molecular orbital (HOMO) and the lowest unoccupied molecular orbital (LUMO) energies are calculated. The analyses of the calculated electronic absorption spectra of the complexes are carried out to elucidate the electronic transitions assignments and their characters. Second-order nonlinear optical property of the complexes is evaluated by the above-mentioned theoretical method that implies much greater values for the complexes in comparison with the corresponding value of urea.     

Vibrational spectroscopy investigation using density functional theory on 7‐chloro‐3‐methyl‐2H‐1,2,4‐ benzothiadiazine 1,1‐dioxide

The solid phase Fourier transform infrared (FTIR) and Fourier transform (FT) Raman spectral analysis of 7‐chloro‐3‐methyl‐2H‐1,2,4‐benzothiadiazine 1,1‐dioxide (diazoxide), an antihypertensive agent was carried out along with density functional computations. The optimized geometry, wavenumber and intensity of the vibrational bands of diazoxide were obtained by DFT‐B3LYP level of theory with complete relaxation in the potential energy surface using 6‐31G(d,p) basis set. A complete vibrational assignment aided by the theoretical harmonic frequency analysis has been proposed. The harmonic vibrational wavenumbers calculated have been compared with experimental FTIR and FT Raman spectra. The observed and the calculated wavenumbers are found to be in good agreement. The experimental spectra coincide satisfactorily with those of calculated spectra. Copyright © 2009 John Wiley & Sons, Ltd.     

Computational studies of vibrational spectra and molecular properties of 6-methyluracil using HF, DFT and MP2 methods

Theoretical investigations of atomic charges, conformers, frontier molecular orbitals, molecular geometries, thermodynamic properties, hyperpolarizabilities and harmonic vibrational frequencies of 6-methyluracil (6MU) have been carried out using ab initio Hartree-Fock (HF), density functional theory (DFT) and second order M?ller-Plesset (MP2) methods. All calculations were performed using the GAMESS-US program package with the basis sets 6-31G(d,p) and 6-311G(d,p). FT-IR and Raman spectra of 6MU were recorded in the regions 50–4000 cm⁻¹ and 60–4000 cm⁻¹ respectively. Optimized geometries were obtained using the global optimization procedure. The calculated structural parameters for two conformers of 6MU have been compared with experimentally observed values. The energy barrier (ΔE=ELUMO-EHOMO) between the HOMO and LUMO is predicted on the basis of theoretical calculations. The simulated TD-DFT spectrum has been compared with experimental electronic spectrum for 6MU. The calculated potential energy distribution (PED) values have been utilized to perform vibrational assignment of the infrared and Raman spectra.     

Quantum-chemical calculation on 5-phenyl-2-(4-pyridyl)pyrimidine

The molecular geometry and vibrational frequencies of 5-phenyl-2-(4-pyridyl)pyrimidine in the ground state have been calculated by the density functional theory with B3LYP/6-311G(d) as the basis set. The observed frequencies of 5-phenyl-2-(4-pyridyl)pyrimidine and those calculated are nearly the same. The form of the modes for all fundamentals is based on potential energy distribution calculations.     

三碘甲状腺素团簇结构与光谱性质的密度泛函理论研究

我们利用密度泛函理论(DFT),在B3LYP/Lan12mb基组水平上,得到了三碘甲状腺素团簇的几何和电子结构.在此基础上,利用含时密度泛函理论(TDDFT),使用相同的基组和采用极化连续介质模型(PCM),对其溶剂效应下的吸收光谱进行研究．研究结果表明,优化所得三碘甲状腺素团簇的对称性为C₁;在基态稳定结构基础上,研究了该分子的红外和拉曼分子振动谱特性,同时研究了其输运性质,即三碘甲状腺素团簇为p型输运材料;通过含时密度泛函理论,在优化好的基态结构基础上,又计算了它的溶剂效应,进一步得出该分子在水溶剂中的吸收光谱特性.     

Density functional theory study of structural,electronic,and thermal properties of Pt,Pd, Rh,Ir, Os and PtPdX(X= Ir,Os, and Rh) alloys

The structural, electronic, mechanical, and thermal properties of Pt, Pd, Rh, Ir, Os metals and their alloys Pt Pd X(X= Ir, Os and Rh) are studied systematically using ab initio density functional theory. The groundstate properties such as lattice constant and bulk modulus are calculated to find the equilibrium atomic position for stable alloys. The electronic band structure and density of states are calculated to study the electronic behavior of metals on making their alloys. The electronic properties substantiate the metallic behavior for all studied materials. The firstprinciples density functional perturbation theory as implemented in quasi-harmonic approximation is used for the calculations of thermal properties.We have calculated the thermal properties such as the Debye temperature, vibrational energy, entropy and constant-volume specific heat. The calculated properties are compared with the previously reported experimental and theoretical data for metals and are found to be in good agreement. Calculated results for alloys could not be compared because there is no data available in the literature with such alloy composition.     

Vibrational spectroscopy and DFT calculations of di‐amino acid peptides: α‐ and β‐N‐acetyl‐L‐Asp‐L‐Glu in the solid state

Experimental vibrational spectroscopic studies and density functional theory (DFT) calculations of the di‐amino acid peptide derivatives α‐ and β‐N‐acetyl‐L‐Asp‐L‐Glu have been undertaken. Raman and infrared spectra have been recorded for samples in the solid state. DFT simulations were conducted using the B3‐LYP correlation functional and the cc‐pVDZ basis set to determine energy minimized/geometry optimized structures (based on a single isolated molecule in the gaseous state). Normal coordinate calculations have provided vibrational assignments for fundamental modes, including their potential energy distributions. Significant differences are observed between α‐ and β‐N‐acetyl‐L‐Asp‐L‐Glu both in the computed structures and in the vibrational spectra. The combination of experimental and calculated spectra provide an insight into the structural and vibrational spectroscopic properties of di‐amino acid peptide derivatives. Copyright © 2009 John Wiley & Sons, Ltd.     

杀草强分子的拉曼光谱的密度泛函理论研究

本文采用密度泛函理论(density functional theory,DFT),在B3LYP杂化泛函,6-31++g(d,p)(C,H,N)和LanL2DZ(Ag)基组下对杀草强分子及其Ag复合物的结构进行了优化;通过频率计算,获得了杀草强分子及其Ag复合物的拉曼光谱,并利用势能函数分布(PED)对拉曼光谱进行了指认,结合SERS光谱推测了杀草强和增强基底之间的吸附方式;采用含时密度泛函理论(time dependent density functional theory,TDDFT)对杀草强分子和杀草强分子-Ag复合物进行了激发态的分析计算。     

2-巯基-5-甲基-1, 3, 4-噻二唑分子的拉曼、红外光谱和简正振动分析

实验测量了2-巯基-5-甲基-1, 3, 4-噻二唑分子的拉曼和红外光谱, 采用B3LYP混合泛函和6-31+G(d, p)基函数组, 计算了该分子的最稳定构型和振动频率。以实验频率为标准采用简正振动分析方法得到了该分子各振动频率的势能分布, 从而对其振动频率归属做出了全面地指认。     

Vibrational assignments and electronic structure calculations for 6‐thioguanine

The Fourier transform Raman and Fourier transform infrared (FT‐IR) spectra of thioguanine have been recorded. Ab initio and density functional computations of the vibrational (IR) spectrum, the molecular geometry, Highest Occupied Molecular Orbital (HOMO)–Lowest Unoccupied Molecular Orbital (LUMO) energy gaps and polarizabilities were studied. On the basis of the comparison between calculated and experimental results and the comparison with related molecules, assignments of fundamental vibrational modes are examined. The observed and simulated spectra were found to be well comparable. The electronic transition energies and intensities of spectral lines were carried out using TDDFT and ZINDO methods. Copyright © 2009 John Wiley & Sons, Ltd.