Divalent Cations Increase DNA Repair Activities of Bacterial (6‐4) Photolyases

The (6‐4) photolyases of the FeS‐BCP group can be considered as the most ancient type among the large family of cryptochrome and photolyase flavoproteins. In contrast to other photolyases, they contain an Fe‐S cluster of unknown function, a DMRL chromophore, an interdomain loop, which could interact with DNA, and a long C‐terminal extension. We compared DNA repair and photoreduction of two members of the FeS‐BCP family, Agrobacterium fabrum PhrB and Rhodobacter sphaeroides RsCryB, with a eukaryotic (6‐4) photolyase from Ostreococcus, OsCPF, and a member of the class III CPD photolyases, PhrA from A. fabrum. We found that the low DNA repair effectivity of FeS‐BCP proteins is largely stimulated by Mg²⁺ and other divalent cations, whereas no effect of divalent cations was observed in OsCPF and PhrA. The (6‐4) repair activity in the presence of Mg²⁺ is comparable with the repair activities of the other two photolyases. The photoreduction, on the other hand, is negatively affected by Mg²⁺ in PhrB, but stimulated by Mg²⁺ in PhrA. A clear relationship of Mg²⁺ dependency on DNA repair with the evolutionary position conflicts with Mg²⁺ dependency of photoreduction. We discuss the Mg²⁺ effect in the context of structural data and DNA binding.     

REDUCED NEAR-UV SENSITIVITY IN Phycomyces MUTANTS AFFECTED IN THE BIOSYNTHESIS OF 6,7-DIMETHYL-8-RIBITYLLUMAZINE

Riboflavin-requiring mutants of Phycomyces blakesleeanus with defects in the genes ribA, ribB, ribC and ribD were analyzed with respect to their contents of flavins, 6,7-dimethyl-8-ribityllu-mazine (DMRL) and pterins as well as their phototropic sensitivity. Strains were grown on minimal medium enriched with 10^?6M riboflavin (RB), and the concentrations of the respective pigments in sporangiophores were determined by HPLC. In strains A607 ribC401 and A641 ribC402 madA7 a loss of DMRL correlated with a loss of near-UV sensitivity. In general terms, the results suggest the participation of DMRL in photoreception, which does not necessarily imply DMRL as a photoreceptor chromophore. In more specific terms, the result could be understood on the basis of a UV/blue-light photoreceptor, which includes besides a flavin also a lumazine-like chromophore. Mutants C318 ribA I and C323 ribA4 accumulated DMRL, the immediate precursor of RB, as well as biopterin and neopterin. Mutant C322 ribB contained normal amounts of DMRL and pterins. Mutant C324 ribD5 had reduced amounts of neopterin and biopterin. The fact that some of the RB-requiring mutants displayed abnormal amounts of pterins indicates a common regulation for the flavin and the pterin pathway.     

The Missing Binary Tungsten Iodide Archetype Cluster W4I10

The tungsten iodide cluster W₄I₁₀ is obtained by thermal conversion of W₄I₁₃. The crystal structure of W₄I₁₀ was solved and refined by means of powder X‐ray diffraction techniques. The structure is based on a tetrahedral tungsten cluster core, two face capping, five edge‐bridging, and four apical iodido ligands of which two have bridging functionalities with adjacent clusters. Cluster chains in the structure are arranged following the motive of a kinked chain.     

An Ethenoadenine FAD Analog Accelerates UV Dimer Repair by DNA Photolyase

Reduced anionic flavin adenine dinucleotide (FADH^?) is the critical cofactor in DNA photolyase (PL) for the repair of cyclobutane pyrimidine dimers (CPD) in UV‐damaged DNA. The initial step involves photoinduced electron transfer from *FADH^? to the CPD. The adenine (Ade) moiety is nearly stacked with the flavin ring, an unusual conformation compared to other FAD‐dependent proteins. The role of this proximity has not been unequivocally elucidated. Some studies suggest that Ade is a radical intermediate, but others conclude that Ade modulates the electron transfer rate constant (k_ET) through superexchange. No study has succeeded in removing or modifying this Ade to test these hypotheses. Here, FAD analogs containing either an ethano‐ or etheno‐bridged Ade between the AN1 and AN6 atoms (e‐FAD and ε‐FAD, respectively) were used to reconstitute apo‐PL, giving e‐PL and ε‐PL respectively. The reconstitution yield of e‐PL was very poor, suggesting that the hydrophobicity of the ethano group prevented its uptake, while ε‐PL showed 50% reconstitution yield. The substrate binding constants for ε‐PL and rPL were identical. ε‐PL showed a 15% higher steady‐state repair yield compared to FAD‐reconstituted photolyase (rPL). The acceleration of repair in ε‐PL is discussed in terms of an ε‐Ade radical intermediate vs superexchange mechanism.     

Modular Molecules: Site‐Selective Metal Substitution,Photoreduction, and Chirality in Polyoxometalate Hybrids

The first members of a promising new family of hybrid amino acid–polyoxometalates have emerged from a search for modular functional molecules. Incorporation of glycine (Gly) or norleucine (Nle) ligands into an yttrium‐tungstoarsenate structural backbone, followed by crystallization with p‐methylbenzylammonium (p‐MeBzNH₃⁺) cations, affords (p‐MeBzNH₃)₆K₂(GlyH)[As^III₄(Y^IIIW^VI₃)W^VI₄₄Y^III₄O₁₅₉(Gly)₈‐ (H₂O)₁₄] ? 47 H₂O ( 1 ) and enantiomorphs (p‐MeBzNH₃)₁₅(NleH)₃ [As^III₄(Mo^V₂Mo^VI₂)W^VI₄₄Y^III₄O₁₆₀(Nle)₉(H₂O)₁₁][As^III₄(Mo^VI₂W^VI₂)‐ W^VI₄₄Y^III₄O₁₆₀(Nle)₉(H₂O)₁₁] (generically designated 2 : L ‐Nle, 2 a ; D ‐Nle, 2 b ). An intensive structural, spectroscopic, electrochemical, magnetochemical and theoretical investigation has allowed the elucidation of site‐selective metal substitution and photoreduction of the tetranuclear core of the hybrid polyanions. In the solid state, markedly different crystal packing is evident for the compounds, which indicates the role of noncovalent interactions involving the amino acid ligands. In solution, mass spectrometric and small‐angle X‐ray scattering studies confirm maintenance of the structure of the polyanions of 2 , while circular dichroism demonstrates that the chirality is also maintained. The combination of all of these features in a single modular family emphasizes the potential of such hybrid polyoxometalates to provide nanoscale molecular materials with tunable properties.     

Nicotinamide Adenine Dinucleotides Arrest Photoreduction of Class II DNA Photolyases in FADH˙ State

All light‐sensitive members of the photolyase/cryptochrome family rely on FAD as catalytic cofactor. Its activity is regulated by photoreduction, a light‐triggered electron transfer process from a conserved tryptophan triad to the flavin. The stability of the reduced flavin depends on available external electron donors and oxygen. In this study, we show for the class II photolyase of Methanosarcina mazei , Mm CPDII , that it utilizes physiologically relevant redox cofactors NADH and NADPH for the formation of the semiquinoid FAD in a light‐dependent reaction. Using redox‐inert variants Mm CPDII /W388F and Mm CPDII /W360F, we demonstrate that photoreduction by NADH and NADPH requires the class II ‐specific tryptophan cascade of Mm CPDII . Finally, we confirmed that mutations in the tryptophan cascade can be introduced without any substantial structural disturbances by analyzing crystal structures of Mm CPDII /W388F, Mm CPDII /W360F and Mm CPDII /Y345F.     

Singly Bonded Monoadduct rather than Methanofullerene: Manipulating the Addition Pattern of Trimetallic Nitride Clusterfullerene through One Endohedral Metal Atom Substitution

Bingel–Hirsch reactions of trimetallic nitride clusterfullerenes (NCFs) generally yield methanofullerene (cyclopropane) adducts instead of singly bonded derivatives, which have been reported for monometallofullerenes. Herein, we report the synthesis and characterization of the Bingel–Hirsch derivative of a mixed metal nitride clusterfullerene (MMNCF) TiY₂N@I_h‐C₈₀. Surprisingly, in contrast to the reported Bingel–Hirsch cyclopropane adducts of the analogous NCF Y₃N@I_h‐C₈₀, the Bingel–Hirsch derivative of TiY₂N@I_h‐C₈₀ is the first singly bonded monoadduct (labeled as TiY₂N@C₈₀‐Mono) to be reported, which was determined unambiguously by single‐crystal X‐ray crystallography. Besides, the reactivity of TiY₂N@I_h‐C₈₀ was found to be significantly improved relative to that of Y₃N@I_h‐C₈₀. Upon substituting one endohedral yttrium (Y) atom of Y₃N@I_h‐C₈₀ with titanium (Ti), the Bingel–Hirsch derivative changes from the cyclopropane to the singly bonded monoadduct, revealing that not only the reactivity but also the addition pattern of NCFs can be manipulated simultaneously through one endohedral metal atom substitution.     

Syntheses,Characterization, and Crystal Structures of a Dinuclear Complex and Coordination Polymer of Mercury(II) with Schiff Base Ligands containing N3 and N4 Donors

Two dinuclear mercury(II) iodide compounds, [Hg₂(L)(I)₄] ( 1 ) and [(L′)Hg(μ‐I)₂HgI₂]_n ( 2 ) [L = N,N′‐bis(phenyl(pyridin‐2‐yl)methylene)propane‐1,2‐diamine and L′ = N‐(phenyl(pyridin‐2‐yl)methylene)propane‐1,2‐diamine] were synthesized and characterized. The molecular structures of [Hg₂(L)(I)₄] ( 1 ) and [(L′)Hg(μ‐I)₂HgI₂]_n ( 2 ), which were determined by single‐crystal X‐ray diffraction, indicate that each Hg^II in 1 has a distorted tetrahedral environment around the metal atom with a HgN₂I₂ chromophore, whereas in 2 one mercury(II) atom adopts a distorted tetrahedral arrangement with a HgI₄ chromophore and the other has a distorted square pyramidal environment with HgN₃I₂ chromophore. In the solid state, compound 2 consists of a 1D coordination polymer structure.     

A Photoreducible Copper(II)‐Tren Complex of Practical Value: Generation of a Highly Reactive Click Catalyst

A detailed study on the photoreduction of the copper(II) precatalyst 1 to generate a highly reactive cuprous species for the copper(I)‐catalyzed alkyne‐azide cycloaddition (CuAAC) click reaction is presented. For the photoactive catalyst described herein, the activation is driven by a photoinduced electron transfer (PET) process harnessing a benzophenone‐like ketoprofenate chromophore as a photosensitizer, which is equally the counterion. The solvent is shown to play a major role in the Cu^II to Cu^I reduction process as the final electron source, and the influence of the solvent nature on the photoreduction efficiency has been studied. Particular attention was paid to the use of water as a potential solvent, aqueous media being particularly appealing for CuAAC processes. The ability to solubilize the copper‐tren complexes in water through the formation of inclusion complexes with β‐CDs is demonstrated. Data is also provided on the fate of the copper(I)‐tren catalytic species when reacting with O₂, O₂ being used to switch off the catalysis. These data show that partial oxidation of the secondary benzylamine groups of the ligand to benzylimines occurs. Preliminary results show that when prolonged irradiation times are employed a Cu^I to Cu⁰ over‐reduction process takes place, leading to the formation of copper nanoparticles (NPs). Finally, the main objective of this work being the development of photoactivable catalysts of practical value for the CuAAC, the catalytic, photolatent, and recycling properties of 1 in water and organic solvents are reported.     

Mononuclear eight-coordinate (NH4)3[YIII(Nta)2] and one-dimensional unlimited zigzag type nine-coordinate {K[YIII(Egta) · 4H2O}n complexes: Syntheses and structural determination

The title complexes (NH₄)₃[Y^III(Nta)₂] (I) (H₃Nta = nitrilotriacetic acid) and {K[Y^III(Egta)] · 4H₂O} _n (II) (H₄Egta = ethyleneglycol-bis-(2-aminoethylether)-N,N,N′,N′-tetraacetic acid) were prepared, and their molecular and crystal structures were determined by single-crystal X-ray diffraction techniques. Complex I crystallizes in the rhombohedral crystal system with R $ \bar 3 $ \bar 3 c space group. The central Y³⁺ ion is eight-coordinated by two nitrogen and six oxygen atoms, which come from two tetradentate Nta ligands. The crystal data are as follows: a = 7.9340(14) ?, c = 54.611(15) ?, V = 2977.1(11) ?³, Z = 6, ρ_calcd = 1.738 mg/cm³, μ = 3.011 mm⁻¹, F(000) = 1596, R = 0.0234 and wR = 0.0641 for 686 observed reflections with I ≥ 2σ(I). The {K[Y^III(Egta)] · 4H₂O} _n is nine-coordinated by two nitrogen and seven oxygen atoms and produces a 1D unlimited zigzag-type chain through a bridging carboxylic group. {K[Y^III(Egta)] · 4H₂O} _n crystallizes in the monoclinic crystal system with C2/c space group. The crystal data are as follows: a = 37.588(5) ?, b = 13.7101(19) ?, c = 8.6070(12) ?, β = 99.929(2)°, V = 4369.0(11) ?³, Z = 8, ρ_calcd = 1.753 mg/cm³, μ = 2.934 mm⁻¹, F(000) = 2368, R = 0.0385 and wR = 0.0800 for 4082 observed reflections with I ≥ 2σ(I).     

A Facile Method for the Synthesis of Binary Tungsten Iodides

The preparation of tungsten iodides in large quantities is a challenge because these compounds are not accessible using an easy synthesis method. A new, remarkably efficient route is based on a halide exchange reaction between WCl₆ and SiI₄. The reaction proceeds at moderate temperatures in a closed glass vessel. The new compounds W₃I₁₂ (W₃I₈?2 I₂) and W₃I₉ (W₃I₈? I₂) containing the novel [W₃I₈] cluster are formed at 120 and 150 °C, and remain stable in air. W₃I₁₂ is an excellent starting material for the synthesis of other metal‐rich tungsten iodides. At increasing temperature these trinuclear clusters undergo self‐reduction until an octahedral tungsten cluster is formed in W₆I₁₂. The synthesis, structure, and an analysis of the bonding of compounds containing this new trinuclear tungsten cluster are presented.     

Low‐Temperature N2 Binding to Two‐Coordinate L2Fe0 Enables Reductive Trapping of L2FeN2− and NH3 Generation

The two‐coordinate [(CAAC)₂Fe] complex [CAAC=cyclic (alkyl)(amino)carbene] binds dinitrogen at low temperature (T2 complex, [(CAAC)₂Fe(N₂)], was trapped by one‐electron reduction to its corresponding anion [(CAAC)₂FeN₂]^? at low temperature. This complex was structurally characterized and features an activated dinitrogen unit which can be silylated at the β‐nitrogen atom. The redox‐linked complexes [(CAAC)₂Fe^I][BAr^F₄], [(CAAC)₂Fe⁰], and [(CAAC)₂Fe^?IN₂]^? were all found to be active for the reduction of dinitrogen to ammonia upon treatment with KC₈ and HBAr^F₄?2 Et₂O at ?95 °C [up to (3.4±1.0) equivalents of ammonia per Fe center]. The N₂ reduction activity is highly temperature dependent, with significant N₂ reduction to NH₃ only occurring below ?78 °C. This reactivity profile tracks with the low temperatures needed for N₂ binding and an otherwise unavailable electron‐transfer step to generate reactive [(CAAC)₂FeN₂]^?.     

Alkaline Earth Cluster Compounds AE[W6I14] and the Solvate [Ca(C2H6SO)6][W6I14]

Alkaline earth tungsten iodide clusters AE[W₆I₁₄] with AE = Mg, Ca, Sr, Ba and the solvated compound [Ca(C₂H₆SO)₆][W₆I₁₄] were prepared and structurally characterized. A new synthesis was employed, starting from W₆I₂₂, which is an exceptional compound among binary tungsten iodides because it is soluble in common polar organic solvents. As evidence for the wide range of the applicability of W₆I₂₂, we report the synthesis of the new AE[W₆I₁₄] compounds in comparison to a solid‐state reaction departing from W₃I₁₂.     

(W6I8)Cl4 – A Basic Model Compound for Photophysically Active [(W6I8)L6]2– Clusters?

The heteroleptic cluster compound (W₆I₈)Cl₄ was prepared by thermal conversion of the homoleptic clusters W₆I₁₂ and W₆Cl₁₂ at 700 °C to yield a bright yellow powder. The presence of the smaller chlorido ligands in apical positions of [(W₆I₈)Cl₆]^2– creates nearly spherically clusters showing thermal and chemical inertness. Photoluminescence studies revealed a strong red phosphorescence from excited spin‐triplet states.     

Y16I19C8B4 – ein Yttriumboridcarbidhalogenid mit B2C4-Einheiten

Y₁₆I₁₉C₈B₄ – a Yttrium Boride Carbide Halide Containing B₂C₄ Units The new compound Y₁₆I₁₉C₈B₄ was prepared from Y, YI₃, C and B at 1050–1150 °C. The structure of a twinned crystal was determined by means of X-ray diffraction (space group P 1¯, a = 12.311(2) Å, b = 13.996(3) Å, c = 19.695(3) Å, α = 74.96(2)°, β = 89.51(2)°, γ = 67.03(2)°, Z = 2). Y₁₆I₁₉C₈B₄ is a semiconductor and contains nearly planar B₂C₄ units which are located in cages built up by 12 yttrium atoms. Assuming (B₂C₄)^12–, these units can be regarded as isoelectronic with B₂F₄. The yttrium cages are connected via faces to form rods, which are surrounded by iodine atoms. Bridging iodine atoms connect the rods so that layers are formed. The characteristic twinning observed can be understood from the geometry of the crystal structure.     

Intense Upconversion Luminescence of CaSc2O4:Ho3+/Yb3+ from Large Absorption Cross Section and Energy‐Transfer Rate of Yb3+

Concentration‐optimized CaSc₂O₄:0.2 % Ho³⁺/10 % Yb³⁺ shows stronger upconversion luminescence (UCL) than a typical concentration‐optimized upconverting phosphor Y₂O₃:0.2 % Ho³⁺/10 % Yb³⁺ upon excitation with a 980 nm laser diode pump. The ⁵F₄+⁵S₂→⁵I₈ green UCL around 545 nm and ⁵F₅→⁵I₈ red UCL around 660 nm of Ho³⁺ are enhanced by factors of 2.6 and 1.6, respectively. On analyzing the emission spectra and decay curves of Yb³⁺: ²F_5/2→²F_7/2 and Ho³⁺: ⁵I₆→⁵I₈, respectively, in the two hosts, we reveal that Yb³⁺ in CaSc₂O₄ exhibits a larger absorption cross section at 980 nm and subsequent larger Yb³⁺: ²F_5/2→Ho³⁺: ⁵I₆ energy‐transfer coefficient (8.55×10^?17 cm³ s^?1) compared to that (4.63×10^?17 cm³ s^?1) in Y₂O₃, indicating that CaSc₂O₄:Ho³⁺/Yb³⁺ is an excellent oxide upconverting material for achieving intense UCL.     

The Remarkably Robust,Photoactive Tungsten Iodide Cluster [W6I12(NCC6H5)2]

The new heteroleptic tungsten iodide cluster compound [W₆I₁₂(NCC₆H₅)₂] is presented. The synthesis is carried-out from Cs₂W₆I₁₄ and ZnI₂ under solvothermal conditions in benzonitrile solution, yielding red cube-shaped crystals. [W₆I₁₂(NCC₆H₅)₂] represents a heteroleptic [W₆I₈]-type cluster bearing four apical iodides and two benzonitrile ligands. Molecular [W₆I₁₂(NCC₆H₅)₂] clusters form a robust hydrogen bridged crystal structure with high thermal stability and high resistibility against hydrolysis. The electronic structure is analyzed by quantum chemical methods of the calculated electron localization function (ELF) and the band structure. Photoluminescence measurements are performed to verify and describe the photophysical properties of [W₆I₁₂(NCC₆H₅)₂]. Finally, the photocatalytic properties of [W₆I₁₂(NCC₆H₅)₂] are evaluated as a proof-of-concept.     

Silver Complexes of Dihalogen Molecules

The perfluorohexane‐soluble and donor‐free silver compound Ag( A ) ( A =Al(OR^F)₄; R^F=C(CF₃)₃) prepared using a facile novel route has unprecedented capabilities to form unusual and weakly bound complexes. Here, we report on the three dihalogen–silver complexes Ag(Cl₂) A , Ag(Br₂) A , and Ag(I₂) A derived from the soluble silver compound Ag( A ) (characterized by single‐crystal/powder XRD, Raman spectra, and quantum‐mechanical calculations).     

Multiaxial deformations of end‐linked poly(dimethylsiloxane) networks. III. Effect of entanglement density on strain‐energy density function

Strain‐energy density functions (W) of end‐linked polydimethylsiloxane (PDMS) networks with different entanglement densities were estimated as a function of the first and second invariants I₁ and I₂ of Green's deformation tensor on the basis of the quasi‐equilibrium biaxial stress‐strain data. Entanglement densities in the PDMS networks were controlled by varying the precursor PDMS concentration (?₀) in end‐linking. The deduced functional form of W [W = C₁₀(I₁ ? 3) + C₀₁(I₂ ? 3) + C₁₁(I₁ ? 3)(I₂ ? 3) + C₂₀(I₁ ? 3)² + C₀₂(I₂ ? 3)²] is independent of the degree of dilution at network preparation. The contribution of each term in I₁ and I₂ to total energy depends on whether the precursor PDMS solution before end‐linking belongs to the concentrated regime ?₀ > ?_c where many entanglement couplings of precursor chains exist or the moderately concentrated regime ?₀ < ?_c where pronounced entanglement couplings of precursor chains are absent. These results suggest that the rubber elasticity of the end‐linked networks is significantly influenced by the entangled state of precursor chains before end‐linking, and the extra terms in the estimated W that are absent in the prediction of the classical rubber elasticity theories [W = C (I₁ ? 3)] mainly originate from the effect of trapped entanglements. © 2002 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 40: 2780–2790, 2002     

Preparation and Characterization of GCE Coatings Combining DDDMAB and PDADMAC with FAD and HCM for Electrocatalytic Detection of Oxygen and Sulfur Oxoanions

Electrochemically active hybrid coatings based on cationic films, didodecyldimethylammonium bromide (DDDMAB), and poly(diallyldimethylammonium chloride) (PDADMAC) are prepared on glassy carbon electrode surface by cycling the film‐covered electrode repetitively in a pH 7 solution containing flavin adenine dinucleotide (FAD), and anionic hexacyanometalate (HCM) complexes, Fe(CN)₆^3? and Ru(CN)₆^4?. Cyclic voltammetric features of hybrid coatings resemble that of electron transfer process of surface‐confined redox species. Electrochemical quartz crystal microbalance (EQCM) was used to monitor the deposition of FAD on DDDMAB film. Cyclic voltammetric peak potentials of modified electrode were found to be shifted to more negative region with increasing pH of contacting solution with a slope value of 63.3mV per pH unit. The electrocatalytic behavior of FAD‐modified DDDMAB‐coated GCE and hybrid film electrodes was tested towards reduction of oxygen, S₂O₈^2?, SO₅^2? and oxidation of SO₃^2?. The application of FAD‐modified DDDMAB‐coated GCE for S₂O₈^2? estimation was demonstrated in amperometric mode. The sensitivity and detection limit (S/N=3) were 267.6 μA mM^?1 and 2×10^?6 M, respectively.