Atomistic molecular dynamics simulations of peptide amphiphile self-assembly into cylindrical nanofibers

Relaxation of a self-assembled structure of 144 peptide amphiphile (PA) molecules into cylindrical nanofibers is studied using atomistic molecular dynamics simulations including explicit water with physiological ion concentration. The PA for these studies includes a hydrophobic alkyl chain that is attached to the N-terminus of the sequence SLSLAAAEIKVAV. The self-assembly is initiated with PA molecules in a roughly cylindrical configuration, as suggested from previous experimental and theoretical investigations, and the cylindrical configuration that results is found to be stable during 40 ns simulations. In the converged structure of the resulting nanofiber, the cylinder radius is ～44 ?, a result that is consistent with experimental results. Water and sodium ions can penetrate into the peptide portion of the fiber but not between the alkyl chains. Even though each PA has an identical sequence, a broad distribution of secondary structure is found in the converged structure of the nanofiber. The β-sheet population for the SLSL and IKV segments of the peptide is ～25%, which is consistent with previous circular dichroism results. We also found that the epitope sequence IKVAV is located on the surface of the nanofiber, as designed for the promotion of the neurite growth. Our findings will be useful for designing new PA fibers that have improved bioactive properties.     

A composite polyaniline/graphene–coated polyamide6 nanofiber mat for electrochemical applications

In this study, polyamide6 (PA6) nanofiber mats were fabricated through the electrospinning process. The nanofibers were coated by polyaniline (PANI) using the in situ polymerization of aniline in the presence of graphene oxide. The composite of the PANI/graphene oxide–coated nanofiber mat was treated with hydrazine monohydrate to reduce graphene oxide to graphene, and this was followed by the reoxidation of PANI. Field emission scanning electron microscopy (FESEM), Fourier transform infrared spectroscopy (FTIR), wide angle X‐ray diffraction (WAXD), thermal gravimetric analysis (TGA), tensile strength tests, electrical conductivity measurements, cyclic voltammetry (CV), and charge/discharge measurements were conducted on the composite PA6/graphene nanofiber mats. It was found that the surface of the PA6 nanofibers was coated uniformly with the granular PANI and graphene oxide. Besides, the composite nanofibers showed good tensile and thermal properties. Their electrical conductivity and specific capacitance, when used as a separator in the cell, were 1.02 × 10^?4 S/cm and 423.28 F/g, respectively. Therefore, the composite PANI/reduced graphene oxide–coated PA6 nanofiber mats could be regarded as suitable candidates for application in energy storage devices.     

Supramolecular self-assembly of block copolymer based on rigid surfactant

The supramolecular self-assembling of pyridine-containing amphiphilic block copolymers (PS-b- P4VP and PS-PI-P2VP) and 4-biphenylcarboxylic acid (BPCA) in selective solvents has been systematically studied. BPCA molecules are able to complex with the vinylpyridine (VP) moieties through hydrogen bonding, which leads to a transformation of spherical block copolymer micelles into structured nanofibers in solutions. The effects of molar ratio of BPCA to the VP repeat units, solvent selectivity, and copolymer composition on the supramolecular complex nanofiber formation have been systematically investigated by atomic force microscopy (AFM), transmission electron microscopy (TEM), and scanning electron microscopy (SEM). The formation mechanism of supramolecular self-assembly nanofibers was discussed.     

Mechanical characterization of nanofibers using a nanomanipulator and atomic force microscope cantilever in a scanning electron microscope

The mechanical characterization of polymeric nanofibers is essential to explore the potential for their applications in structural materials, such as nanofiber-reinforced polymer composites. A ‘hooking’ method using a nanomanipulator and atomic force microscope (AFM) cantilever was developed in a scanning electron microscope (SEM). First, a single electrospun nanofiber was suspended over a trench in a substrate. The midpoint of the nanofiber was then hooked by the AFM cantilever. As the AFM cantilever moved in the transverse direction of the nanofiber, the nanofiber was elongated until it fractured. The hooking and elongation processes were controlled by a nanomanipulator. This method features an affordable configuration and loading mechanism, because it does not rely on the firm grip of the nanofiber at both ends. Nanofibers with different diameters were tested using this method, demonstrating that nanofibers with a smaller diameter have greater strength and, thus, are highly suitable for use as a nano-reinforcement in composite applications.     

Self-Assembly Molecularly Imprinted Nanofiber for 4-HA Recognition

In this paper, we provided a self-assembly strategy to prepare surface molecularly imprinted polyaniline (PANI) nanofiber. The route provides simplicity, convenience, low cost, and high-productivity due to the omission of the template guided materials and their post-treatment. The molecularly imprinted PANI nanofibers could selectively bind the template (4-hydroxybenzoic acid) molecules, and the nanofibers have large adsorption capacity and fast uptake kinetics for target species. The PANI nanofibers could provide a good material for imprinting various organic or biological molecules toward applications in chemical/biological sensors and bioassay.     

The fabrication of photosensitive self-assembly Au nanoparticles embedded in silica nanofibers by electrospinning

In this study, we demonstrated a simple, efficient, and low-cost method to fabricate large-area self-assembly Au nanoparticles (AuNPs) encapsulated within silica nanofibers (Au/SiO₂). The method is based on electrospinning and thermal decomposition of hybrid nanofibers prepared from the solution of tetraethylorthosilicate (TEOS), polyvinylpyrrolidone (PVP) and AuNPs. This study employed the electrospinning technique for the first time as a successful method for preparing a self-organized AuNP peapod chain in a silica nanofiber matrix, under mild conditions. It has the advantage of easily controlling the diameters of the silica nanofibers as well as the concentration of the AuNPs in the spinning solution. The Au/SiO₂ hybrid nanofibers fabricated by this method exhibited an obvious photoelectric response under the illumination wavelength around the Au/SiO₂ nanofibers surface plasmon resonance (SPR) absorption band, whereas no photoelectric response was observed for the pure silica fibers. The excellent characteristics of photoelectric response suggest that the electrospinning technique has a great potential for large-scale fabrication of functional nanofiber devices. The ability of coupling light responses into the nanosystems dependent on metallic nanoparticle SPR opens up new prospects for the construction of nanoscale waveguiding devices, sensors and optoelectronics.     

Preparation and characterization of polyaniline/polysulfone nanocomposite ultrafiltration membrane

Novel nanocomposite membrane was prepared through the filtration of polyaniline (PANI) nanofiber aqueous dispersion with polysulfone (PS) ultrafiltration (UF) membrane. Scanning electron microscope (SEM) images showed that PANI nanofiber layer was formed on the PS membrane surface. Atomic force microscopy (AFM) analysis indicated that the nanocomposite membrane had rougher surface than the PS substrate membrane. Compared with the PS substrate membrane, the nanocomposite membrane had much better permeability for the good hydrophilicity of PANI nanofiber layer, and had almost the same rejection performance. In addition, the nanocomposite membrane had positive surface potential under acidic condition because PANI could be protonated easily by acid. During the filtration of BSA solution, the nanocomposite membrane showed much better antifouling performance than the substrate membrane for the hydrophilicity and steric hindrance effect of its nanofiber layer. Moreover, under acidic solution condition, strong electrostatic repulsion between PANI nanofibers and BSA existed and improved membrane antifouling performance further.     

An effective continuum approach for modeling non-equilibrium structural evolution of protein nanofiber networks

We quantify the formation and evolution of protein nanofibers using a new phase field modeling framework and compare the results to transmission electron microscopy measurements (TEM) and time-dependent growth measurements given in the literature. The modeling framework employs a set of effective continuum equations combined with underlying nanoscale forces and chemical potential relations governing protein nanofiber formation in solution. Calculations based on the theoretical framework are implemented numerically using a nonlinear finite element phase field modeling approach that couples homogenized protein molecular structure via a vector order parameter with chemical potential relations that describe interactions between the nanofibers and the surrounding solution. Homogenized, anisotropic molecular and chemical flux relations are found to be critical in obtaining nanofiber growth from seed particles or a random monomer bath. In addition, the model predicts both sigmoidal and first-order growth kinetics for protein nanofibers for unseeded and seeded models, respectively. These simulations include quantitative predictions on time scales of typical protein self-assembly behavior which qualitatively match TEM measurements of the RADA16-I protein and growth rate measurements for amyloid nanofibers from the literature. For comparisons with experiments, the numerical model performs multiple nanofiber protein evolution simulations with a characteristic length scale of ～2.4 nm and characteristic time scale of ～9.1 h. These results provide a new modeling tool that couples underlying monomer structure with self-assembling nanofiber behavior that is compatible with various external loadings and chemical environments.     

Surface Functionalization of PEO Nanofibers Using a TiO2 Suspension as Sheath Fluid in a Modified Coaxial Electrospinning Process

Convenient and integration fabrication process is a key issue for the application of functional nanofibers. A surface functionalization method was developed based on coaxial electrospinning to produce ultraviolet(UV) protection nanofibers. The titanium dioxide(TiO₂) nanoparticles suspension was delivered through the shell channel of the coaxial spinneret, by which the aggregation of TiO₂ nanoparticles was overcome and the distribution uniformity on the surface of polyethylene oxide(PEO) nanofiber was obtained. With the content of TiO₂ increasing from 0 to 3%(mass fraction), the average diameter of nanofibers increased from (380±30) nm to (480±100) nm. The surface functionalization can be realized during the electrospinning process to gain PEO/TiO₂ composite nanofibers directly. The uniform distribution of TiO₂ nanoparticles on the surface of nanofibers enhanced the UV absorption and resistance performance. The maximum UV protection factor(UPF) value of composite nanofibers reaches 2751. This work presented a novel surface-functionalized way for the preparation of composite nanofiber, which has great application potential in the field of micro/nano system integration fabrication.     

Peptide amphiphile nanofibers template and catalyze silica nanotube formation

Hollow silica nanotubes with tunable dimensions have been synthesized by condensation of tetraethoxysilane (TEOS) on peptide-amphiphile nanofiber templates followed by calcination. Peptide-amphiphile nanofibers direct silica mineralization by providing nucleation sites and catalyze silica polymerization at their surface. The catalytic activities of peptide-amphiphiles containing lysine, histidine, or glutamic acid were compared and only peptide amphiphiles containing lysine or histidine were found to be good catalytic templates. Depending on the reaction conditions, and the size of the PA assembler, the nanotube wall thickness could be varied between 5 and 9 nm.     

Effects of oligoDNA template length and sequence on binary self-assembly of a nucleotide bolaamphiphile

Templated self-assembly of nucleotide bolaamphiphile 1 (in which a 3'-phosphorylated thymidine moiety is connected to each end of a long oligomethylene chain) with a 10-, 20-, 30-, or 40-meric single-stranded oligoadenylic acid (2, 3, 4, or 5) led to the formation of right-handed helical nanofibers in 0.1x Tris/EDTA (TE) buffer solutions. The helical pitch increased as the length of the oligoadenylic acid template increased. DNA composed of oligoadenylic and oligocytidylic acid sequences (6, 7, and 8) also acted as templates to induce the formation of helical nanofiber structures. The diameter of the nanofibers remained constant (6-6.6 nm) irrespective of the template used. The binary self-assembly of 1 with 4 also produced higher-order, double-stranded nanofibers.     

Nanoparticle‐enhanced bamboo‐like tubular nanofibers for active capture of particulate matter

We proposed a thought of active capture of particles by improving the interaction force between fibers and particles. Nanoparticle‐enhanced tubular nanofibers (Ag‐SPNTs) were prepared by template‐free cationic polymerization followed by surface modification. Ag‐SPNTs have coarse surface and bamboo‐like tubular structure with a diameter of approximately 80‐150 nm. Ag nanoparticles were embedded on the nanofibers surface, and the content of Ag nanoparticles in the nanofibers could be tuned by changing the concentration of [Ag(NH₃)₂]⁺ in the preparation process. f‐d curve measured by AFM showed that increasing the content of Ag nanoparticles in the nanofibers resulted in the enhanced interaction force between the nanofiber surface and particles. Particle matter capture test showed that the number of captured microscaled/naonoscaled particles on the fiber surface increased obviously for the nanoparticle‐enhanced tubular nanofibers (Ag‐SPNTs) compared to the nanofibers without nanoparticle (SPNTs), probably due to the increased interaction force and adhesion energy between fiber surface and particles. Filtration property test showed that the Ag‐SPNTs fiber films had a better filtration performance with a higher filter efficiency and QF value than that of SPNTs. © 2019 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2019     

Fabrication and electrochemical instrumentation of redox‐active nanofiber mat for polyaniline incorporated with poly(imide sulfonate)

In this study, we demonstrate the fabrication of an electrochemically active nanofiber mat that is a composite of high‐performance poly(imide sulfonate) (PIS) and polyaniline (PANI). First, a nonconductive nanofiber mat comprising nanofibers having diameters of ca. 300 nm was fabricated by the electrospinning of ionomeric PIS in N,N‐dimethylformamide (DMF). Then, the nanofibers were modified using PANI, which was synthesized by the oxidative polymerization of aniline, yielding an electrochemically active nanofiber mat having a diameter of ca. 350 nm. It was confirmed that PANI was successfully incorporated onto the PIS nanofiber mats by X‐ray photoelectron spectroscopy. Subsequently, we conducted electrochemical measurements of the PANI‐modified nanofiber mats using a tailor‐made attachment in which the working electrode gently comes in contact with the nanofiber mat surface. This attachment was observed to be widely useful in the cyclic voltammetry measurements related to redox‐active nanofibers. These observations are expected to contribute to the advancements in application development of the electrochemically active nanofiber mats.     

Enhancement of conductivity by diameter control of polyimide-based electrospun carbon nanofibers

Oxydianiline-pyromellitic dianhydride poly(amic acid) (ODA-PMDA PAA) was polymerized with a catalyst support of triethyl amine for controlling molecular weight. This polymer was used for electrospinning in the preparation of PAA nanofibers, a precursor of carbon nanofibers. Here the amount of catalyst and concentration of PAA solution were optimized to produce polyimide-based carbon nanofibers approximately 80 nm in diameter. The effects of molecular weight of PAA, bias voltage, and spinning rate on the morphology of electrospun PAA and polyimide nanofibers have been evaluated. We showed that the conductivity of the carbon nanofiber mat decreased with increasing nanofiber diameter, where the conductivity of polyimide-based carbon nanofiber mat was much higher than those of other types of carbon nanofiber mat. The key ingredient to increase conductivity in a carbon nanofiber mat was found to be the number of cross junctions between nanofibers.     

Electrostatic effects on nanofiber formation of self-assembling peptide amphiphiles

Self-assembling peptide amphiphile molecules have been of interest to various tissue engineering studies. These molecules self-assemble into nanofibers which organize into three-dimensional networks to form hydrocolloid systems mimicking the extracellular matrix. The formation of nanofibers is affected by the electrostatic interactions among the peptides. In this work, we studied the effect of charged groups on the peptides on nanofiber formation. The self-assembly process was studied by pH and zeta potential measurements, FT-IR, circular dichroism, rheology, atomic force microscopy, scanning electron microscopy and transmission electron microscopy. The aggregation of the peptides was triggered upon neutralization of the charged residues by pH change or addition of electrolyte or biomacromolecules. Understanding the controlled formation of the hydrocolloid gels composed of peptide amphiphile nanofibers can lead us to develop in situ gel forming bioactive collagen mimetic nanofibers for various tissue engineering studies including bioactive surface coatings.     

Self-assembled chitin nanofibers and applications

Self-assembled natural biomaterials offer a variety of ready-made nanostructures available for basic science research and technological applications. Most natural structural materials are made of self-assembled nanofibers with diameters in the nanometer range. Among these materials, chitin is the second most abundant polysaccharide after cellulose and is part of the exoskeleton or arthropods and mollusk shells. Chitin has several desirable properties as a biomaterial including mechanical strength, chemical and thermal stability, and biocompatibility. However, chitin insolubility in most organic solvents has somewhat limited its use. In this research highlight, we describe recent developments in producing biogenic chitin nanofibers using self-assembly from a solution of squid pen β-chitin in hexafluoroisopropanol. With this solution based assembly, we have demonstrated chitin-silk composite self-assembly, chitin nanofiber fabrication across length-scales, and manufacturing of chitin nanofiber substrates for tissue engineering.     

Ion condensation onto self‐assembled nanofibers

Self‐assembled peptide amphiphile (PA) nanofibers are a class of supramolecular materials with promising applications in nanotechnology. Alignment of nanofibers, which is essential for biomaterials applications, is achieved at low salt concentrations in the PA nanofiber suspensions. Regardless of its importance, the effect of ion concentration on the properties of these nanostructures remains unexplored. Using atomistic molecular dynamics simulations, canonical PA nanostructures are investigated to elucidate the relationship between counterion condensation and morphological changes. Simulations reveal that nanofibers with the highest cross‐section density have expanded radii. This expansion decreases the accessible volume for sodium counterions and diminishes the counterion translational entropy, while also reducing the total electrostatic potential. Interestingly, we show that the competition between these effects leads to a fraction of condensed counterions independent of the fiber radius. © 2017 Wiley Periodicals, Inc. J. Polym. Sci., Part B: Polym. Phys. 2017 , 55, 901–906     

Self-assembly of peptide-amphiphile nanofibers: the roles of hydrogen bonding and amphiphilic packing

The role of hydrogen bonding and amphiphilic packing in the self-assembly of peptide-amphiphiles (PAs) was investigated using a series of 26 PA derivatives, including 19 N-methylated variants and 7 alanine mutants. These were studied by circular dichroism spectroscopy, a variety of Fourier transform infrared spectroscopies, rheology, and vitreous ice cryo-transmission electron microscopy. From these studies, we have been able to determine which amino acids are critical for the self-assembly of PAs into nanofibers, why the nanofiber is favored over other possible nanostructures, the orientation of hydrogen bonding with respect to the nanofiber axis, and the constraints placed upon the portion of the peptide most intimately associated with the biological environment. Furthermore, by selectively eliminating key hydrogen bonds, we are able to completely change the nanostructure resulting from self-assembly in addition to modifying the macroscopic mechanical properties associated with the assembled gel. This study helps to clarify the mechanism of self-assembly for peptide amphiphiles and will thereby help in the design of future generations of PAs.     

Self-assembly combining two bioactive peptide-amphiphile molecules into nanofibers by electrostatic attraction

We describe a new approach to peptide-amphiphile (PA) nanofiber preparation that allows PAs with different bioactive amino acid sequences to be combined into a single fiber. Oppositely charged PAs are synthesized separately and then mixed to produce gels of nanofiber networks at physiological pH. Transmission electron microscopy reveals the formation of fibers approximately 7 nm in diameter and several micrometers long in these dimeric systems. On the basis of NMR and microscopy, we suggest that these nanofibers are cylindrical micelles of mixed composition, formed due to electrostatic attraction between the oppositely charged PAs. This strategy for self-assembly may be useful in cell therapies that can be implemented without invasive surgery or in in vitro tissue engineering.     

浸润性可调的导电聚苯胺/聚丙烯腈同轴纳米纤维

聚苯胺(PANI)因其具有可调的导电性、优异的化学稳定性、简单的制备方法等特点, 在化学电源、抗静电涂层、电磁屏蔽材料、抗腐蚀、传感器等领域具有广泛的应用前景[^1~4]. 由于聚苯胺的刚性分子链使得聚苯胺几乎不溶不熔, 难以加工应用, 因此, 将导电聚合物直接制成纳米纤维一直是合成纤维界所希望的目标之一. 此外, 由于材料尺度的减小, 使纳米材料的表面与界面性质,尤其是表面浸润性变得更为突出.浸润性是固体表面的重要特征之一, 它主要由表面的化学组成和微观结构共同决定^[5,6]. 可调的浸润性在超疏水材料、药物传输、仿生材料和微流体等领域具有重要的应用价值^[7~10] , 引起人们广泛关注.