Carbon-13 NMR studies of 1-aryl-3-phenyl-2-thioxo-4-imidazolidinones. Conformational isomerism and substituent effects

Characteristic ^13C chemical shift ranges and substituent shifts of heterocyclic ring carbon atoms have been identified for a number of 1-aryl-3-phenyl-2-thioxo-4-imidazolidinones. ¹³CNMR spectra may be used to detect slow internal rotation about the aryl C? N-1 bond in compounds with diastereomeric rotational isomers; many corresponding carbon atoms in the rotamers have distinctly different chemical shifts. The δ-effects originating from aryl ortho substituents are both electronic and steric in origin.     

Synthesis and 1H NMR spectra of some 1-aryl-2,5-pyrrolidinediones

Three 1-aryl-2,5 pyrrolidinediones, two of which are novel, were prepared by reaction of the requisite primary aromatic amines with succinic anhydride, followed by treatment with acetic anhydride. The ¹H nmr spectra for the derivatives in which aryl is 1-naphthyl and 1-anthracenyl exhibit 32-line multiplets for the four aliphatic hydrogens, indicating that all four are in different environments. Examination of molecular models demonstrates that the pyrrolidinedione and aryl ring systems cannot be coplanar and that rotation about the nitrogen-aryl bond is restricted. Molecular mechanics calculations reveal that a dihedral angle of 50–65° for the two ring systems results in the minimum steric interaction energy.     

Carbon-13 NMR spectra of 3-aryl-2-thioxo-4-imidazolidinones. Conformational isomerism and substituent effects

A ¹³C NMR study of a series of 3-aryl-2-thioxo-4-imidazolidinones, which are capable of existing as enantiomeric or diastereomeric rotational isomers about the aryl C? N bond, shows that rates of internal rotation are slow at the probe temperature. The effects of hetero- and aryl-ring substituents on hetero-ring carbon atoms have been established.     

1H and 13C NMR spectral study of some 3-aryl-5r-aryl-6t-carbethoxycyclohex-2-enones-a study of four-bond 1H-1H couplings

Nine 3-aryl-5r-aryl-6t-carbethoxycyclohex-2-enones 2a-2i have been synthesized. For all these compounds, (1)H and (13)C NMR spectra have been recorded. For two compounds, 2D spectra have been recorded. The spectral data suggest that these compounds adopt sofa conformation in solution with H-5, H-6 and H-4t occupying axial-like positions and H-4c occupying equatorial-like positions. In 3-phenyl-5r-(o-chlorophenyl)-6t-carbethoxycylohex-2-enone (2b), the o-chlorophenyl group is oriented such that the chlorine atom is in between H-4c and H-5. Allylic coupling of H-2 is observed only with H-4t. Evidence has been obtained for four-bond coupling between 1,3-diaxial and 1,3-axial-equatorial protons.     

Conformational analysis of new 14-membered ring diketal dilactam macrocycles: molecular mechanics, liquid and solid state NMR studies

A conformational study of new diversely substituted 14-membered diketal dilactam macrocycles was conducted by NMR spectroscopy in liquid and solid states, molecular mechanics calculations and, for one compound, a previous X-ray analysis. The results obtained by the different techniques show that the conformations depend closely on whether the molecules are chiral or achiral and on the stereochemistry of the ketal OMe groups. In achiral compounds, the most stable conformation of each compound has, in both the liquid and solid states, the two NH-CO links positioned perpendicular to the macrocycle plane, lending to the trans-7,7′-OMe macrocycles 6b and 7b a rectangular [3434]-type structure. In contrast, in chiral compounds, the most stable conformations are not the same in the liquid and solid phases. In the liquid state the conformations are set by the presence of one or two N₄-H?O_1′, N_4′-H?O₁ intramolecular hydrogen bonds that position the amide group parallel to the macrocycle plane, whereas in the solid state the amide moieties again adopt a perpendicular position which can be stabilized, when the 3-R substituent is not too bulky, by intermolecular N-H?OC bonds between parallel sheets, and exceptionally, in the cis-7,7′-OMe-3,3′-Ph compound 1c, by a π-π stacking effect between the phenyl groups.     

Conformational analysis of oxazolidines by molecular and quantum mechanics and NMR spectroscopy

A combined experimental (¹HNMR) and theoretical (molecular mechanics and PCILO) study of (4S,5S,6R)-4-carbome-thoxyethylenyl-N-carbobenzyloxy-5-methyl-6-phenyl oxazolidine has been carried out with the purpose of contributing to a better understanding of the steric and electronic factors responsible for the observed diastereoisomeric selectivity in the dihydroxylation of oxazolidines leading to optically active α, β dialkoxyaldehydes.     

1H NMR spectra of oxiranes. cis-Arylmethyl oxiranes substituted in the phenyl ring

The ¹H NMR parameters for a number of cis-arylmethyl oxiranes are reported and discussed in comparison with those of trans derivatives and styrene oxides substituted in the phenyl ring. While the macroscopic behaviour of the results is in agreement with a perturbative mechanism through the oxirane ring that is mainly electrostatic in character, a small contribution due to conjugative interaction is not excluded. It seems likely that the effect of substituents in the phenyl ring is mainly transmitted through bonds rather than through space, and that the different polarisation of the C? H bonds in the oxirane ring is mainly responsible for the different behaviour of the protons in cis- and trans- arylmethyl oxiranes towards the effect of substituents.     

Preparation and C NMR study on 1-aryl-3,3-difluoro-2-(phenylethynyl)cyclopropenes: long distance Hammett substituent effect

Coupling of 1-aryl-3,3-difluoro-2-chlorocyclopropenes and phenylacetylene using Sonogashira reaction with Pd(OAc)₂ and CuI as the catalyst with K₂CO₃ as a base yields phenylethynylcyclopropenes in high selectivity and good yields. The ¹³C chemical shifts of C? of ∼105 ppm on acetylene group significantly different from phenylacetylene (84 ppm) suggest that the acetylene group possesses less sp hybrid character due to an unusual long distance Hammett substituent effect. It is also confirmed by the substituent parameter analysis, while the Cβ and C? display the strong resonance effect (their values are 6.89 and 3.37, respectively).     

Conformational study of N-vinyl-2-isopropyl- and N-vinyl-2-cyclopropylpyrroles by1H and13C NMR

In N-vinyl-2-isopropylpyrrole the isopropyl group is in a conformation with the CH₃ group in an anti position to the vinyl group. On introducing a substituent at the 3 position of the ring the isopropyl group passes into a gauche and (or) a syn conformation, leading to an increase in the dihedral angle between the plane of the vinyl group and the pyrrole ring. In N-vinyl-2-cyclo-propylpyrrole the cyclopropyl group is 80% in the gauche form, which is attributed to the repulsion between the electrons of the -shells of the cyclopropyl and pyrrole fragments.Translated from Izvestiya Akademii Nauk SSSR, Seriya Khimicheskaya, No. 5, pp. 1031–1038, May, 1991.     

Conformational analysis: crystallographic,NMR, and molecular mechanics studies of flexible sulfonic esters

Two novel X-ray structures of the sulfonic ester derivatives 2-(6-iodo-1,3-benzodioxol-5-yl)ethyl 4-nitrobenzenesulfonate, 3, and 2-(6-iodo-1,3-benzodioxol-5-yl)ethyl 4-methylbenzenesulfonate, 4, have been obtained in a study aimed at analyzing the structures and conformations of sulfonic ester derivatives that are routinely used in alkaloid syntheses. The crystal structure of 4 is highly unusual, containing four independent molecules that belong to two distinct conformational types: (1) a hairpin conformation (stabilized mainly by intramolecular pi-stacking) and (2) a stepped conformation (stabilized mainly by intermolecular pi-stacking). Compound 3, on the other hand, crystallizes exclusively as the hairpin conformer. New MM+ force field parameters for sulfonic esters have been developed using the X-ray data, empirical rules, and DFT calculations to estimate the bond dipole parameters. Grid searches of conformational space for 3 and 4 using MM methods show that there are several gas-phase conformations within 5 kcal/mol of the global minimum and that the lowest energy conformations (by approximately 4.6 kcal/mol) are of the hairpin type. Analysis of the MM conformational energies suggests that the dominant intramolecular interaction stabilizing the hairpin conformations of 3 and 4 is van der Waals attraction. Moreover, the lattice energies for packing the hairpin conformations of 3 and 4 are approximately 4 kcal/mol more favorable than for the stepped conformations. Various intermolecular interactions contribute to the complexity of the observed crystal structures of 3 and 4, including electrostatic attraction between O and I atoms in neighboring molecules. Langevin dynamics (LD) simulations at several temperatures (6.0 ns, friction coefficient = 2.5 ps(-1)) indicate that the conformational exchange rates are approximately 10(10)-10(11) s(-1) over the temperature range 213-400 K, accounting for the temperature-independent (1)H NMR spectra of 3 and 4.     

1H, 2H and 13C NMR spectra and molecular dynamics of some solid alkylene-aromatic polyesters

Molecular dynamics of some mesomorphic main–chain alkylene–aromatic polyesters have been investigated by means of NMR spectra of various nuclei over a wide temperature range. In solid polymers regions of different molecular mobilities coexist and their fractions are determined by the sample temperature and thermal history. The sample annealing leads to the growth of rigid fraction. It was found that below the glass transition temperature the only forms of large–scale mobility are the torsional vibrations and flips of para–phenylene groups, while spacer groups are virtually rigid. Above the glass temperature almost all phenylene rings undergo flipping motions and methylene groups of the spacer take part in complicated motions of both anisotropic and isotropic character.     

A 1H NMR study of tautomerism in some 1-arylamino-3-aryliminopropenes

¹H n.m.r. spectra at ambient temperatures reveal that an equilibrium exists between the ‘all-trans’ and ‘all-cis’ isomers of some of the 1-arylamino-3-aryliminopropenes. The ‘all-cis’ isomer predominates in nonpolar solvents, whereas the ‘all-trans’ isomer is favoured in hydrogen bonding solvents. From a consideration of the magnitudes of the ³J coupling constants, it is reported that the ‘cis-trans’ isomer is the most stable form of the 4-nitrophenyl derivative in dimethyl sulphoxide.     

Conformational study of a strained tolanophane by dynamic 1H NMR spectroscopy and computational methods

The existence of a short C–H ⋯ π (alkyl–alkyne) interaction in the structure of a strained and relatively rigid tolanophane is expected to hinder the rotation about the C–C sp³ single bond. Variable-temperature NMR experiments (performed in three solvents, CDCl₃, THF-d₈, and acetone-d₆) and ab initio density functional calculations were carried out to investigate its dynamic nature. An energy barrier of 48.6 kJ/mol is determined at coalescence (210 K) with acetone-d₆ which is in good agreement with calculation result (54 kJ/mol). Correspondence: Hossein Reza Darabi, Chemistry and Chemical Engineering Research Center of Iran, Pajoohesh Blvd., km 17, Karaj Hwy, 14968-13151 Tehran, Iran.     

The 1H NMR spectra of p-substituted phenyl 2-chloro-2-fluoroethyl sulphides

The 60 MHz ¹H NMR spectra of p-substituted phenyl 2-chloro-2-fluoroethyl sulphides have shown characteristic patterns; in the ABC portion of an ABCX spin system (X = ¹⁹F) of the compounds, one of the subspectra shows an ABC pattern and the other apparently an AB₂ pattern. These spectral patterns have been analysed and the ¹H NMR data obtained are discussed briefly.     

Correlation between 2H NMR side-chain order parameters and sequence conservation in globular proteins

Side-chain 2H NMR relaxation data have been collected for the SH3 domain from the Fyn tyrosine kinase and analyzed with respect to sequence preference and per-residue solvent accessibility. Residues that are highly preferred at a given position show a tendency to be less mobile than average with a coefficient of correlation that is greater than that obtained when side-chain flexibility and solvent accessibility are compared. The same trend is observed for five of six additional proteins considered. This provides evidence for the existence of conserved structural features other than hydrophobic burial that govern side-chain motions. Through examination of an SH3 domain structural alignment, we identify side-chain hydrogen bonding of threonine residues and a specific secondary structural element as potential determinants of protein internal dynamics.     

Conformational studies of N-carbomethoxy-2-alkoxyindolenines by dynamic NMR, crystallography, and molecular mechanics

The synthesis of N-carbomethoxy-2-alkoxyindolenines and the transformation to their tautomeric indoles is reported. Variable-temperature ¹H NMR studies of these 2-alkoxyindolenines evidenced dynamic processes involving two low-energy E and Z equilibrating conformers around the N-C(O) carbamate bond, for which the barriers (ΔG^≠) between the two conformations are in the order of 12.5-13.9 kcal/mol, as deduced from computational NMR line shape simulations. The rotational barrier decreases as the bulkiness of the alkoxyl group increases, with the E conformer being always more stable. Molecular mechanics calculations evidenced a preferred quasi-axial position of the alkoxyl group in the five-membered ring as the steric effect increases, in agreement with X-ray diffraction studies.     

Stereochemicai study of 7-aryl-1,7,8,8a-tetrahydro-3(2H)indolizinones by1H and13C NMR

Stereochemistry of 7-aryl-1,7,8,8a-tetrahydro-3(2H)-indolizinones was studied by¹H and¹³C NMR. Complete assignment of¹H NMR signals and analysis of¹H-¹H coupling constants were performed using the iterative PANIC program. Values of³ J _6,7,³ J _7,8endo, and⁴ J _5,7 allow one to unambiguously identify the correspondingexo- andendo-stereoisomers. For stereoisomers with exo-orientation of H(7), complete assignment of¹³C NMR signals was performed on the basis of analysis of the¹³C-¹H coupling constants using two dimensional heteronuclear shift-correlating spectroscopy.Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 3, pp. 591–593, March, 1996.     

Tricyanovinylation of 2-aryl-1-vinylpyrroles: solvent- and substituent controlled chemo- and regioselectivity

2-Aryl-1-vinylpyrroles in acetone, THF and benzene react with tetracyanoethene chemo- and regiospecifically across the vinyl group to give 3-(2-arylpyrrol-1-yl)-1,1,2,2-cyclobutanetetracarbonitriles in 88-94% yield. The latter, upon recrystallization from EtOH, eliminates HCN and entirely rearranges to afford stereospecifically trans-(3E)-4-(2-arylpyrrol-1-yl)-1,3-butadiene-1,1,2-tricarbonitriles. In DMSO, along with the above [2+2]-cycloaddition, tricyanovinylation of the pyrrole ring occurs to form the corresponding 3- and 5-tricyanovinylpyrroles, the product ratio being dependent on the substituents in the pyrrole ring and the reaction conditions.     

Conformational analysis of thia crown ether derivatives by NMR spectroscopy and molecular mechanics calculations

Summary Addition of sulfur dichloride to tetrachlorocatechol-bisallylether (1) yields the 9- and 10-ring thia crown ether derivatives2 and3, respectively, together with the dithia-18-crown-6-ether4. The 10-membered ring compound3 represents the first thia macrocycle containing bothMarkovnikov andanti-Markovnikov constitution of the -chloro-thio structural segments in the same molecule. By¹H and¹³C NMR spectroscopy, equal amounts of two preferred conformers of the only isolated diastereomer of3 were observed at temperatures below –50°C. The signals were assigned to these conformers using COSY, HETCOR, and phase sensitive NOESY spectra at low temperatures. The preferred conformations and the relative configuration were determined using the different effects of _gauche -and _anti -positions in¹³C NMR chemical shifts and analyzing vicinal³ J _H,H coupling constants. These results were confirmed by molecular mechanics calculations.Dedicated to Prof. Dr.Rolf Borsdorf on the occasion of his 65^th birthday     

Conformational analysis—131: A molecular mechanics treatment of phosphines

The molecular mechanics method (1973 force field) has been extended to include the general class of phosphaalkanes. Structural data on simple molecules were fit well, and equilibria between conformations can be calculated in general in agreement with experiment, in sofar as experimental data are known. Phosphacyclohexane and a few simple derivatives have been studied in some detail. It is concluded that the force field developed is adequate for the prediction of structures and energy differences, but it is not possible to calculate heats of formation, due to the lack of experimental data.