PHOTOPHYSICAL PROPERTIES OF NUCLEIC ACID COMPONENTS—1. THE PYRIMIDINES: THYMINE, URACIL, N, N-DIMETHYL DERIVATIVES AND THYMIDINE

Abstract— Low-temperature (and some room temperature) absorption and emission, fluorescence and phosphorescence, data including quantum yields and lifetimes have been obtained from the title pyrimidine bases as a function of the nature of the solvent environment. Modest vibrational resolution has been observed for the first time in the absorption spectra, particularly for thymine and uracil. The excitation spectra also show structure. The quantum yields of fluorescence (φ_F) and phosphorescence are independent of the excitation wavelength. Thymine, thymidine and uracil have profoundly different photophysical properties in polar-aprotic vs polar-protic solvents. The N, N-dimethyl substitution of thymine and uracil produces photophysical changes comparable to the solvent change for the unsubsti-tuted bases. The species involved in the emission processes is the keto (lactam) form. It is probable that ^1,3(n,π*) state(s) has(have) changed order relative to a lowest ¹(π,π*) state as a consequence of both the solvent change and N, N-dimethyl substitution. The lowest triplet state is assigned as ³(n π*). We propose that an important factor contributing to the previously reported excitation wavelength dependence of φ_F and φ_T1 (φ_isc) for nucleic-acid components is the equilibrium coexistence of H-bonded and non-H-bonded forms each having different photophysical properties. Consideration is given of the impact of the significantly different photophysical properties of nucleic-acid bases as a function of the nature of the solvent upon the photochemical properties.     

FLUORESCENCE CHARACTERISTICS OF INDOLES IN NON-POLAR SOLVENTS: LIFETIMES, QUANTUM YIELDS AND POLARIZATION SPECTRA

Abstract— Fluorescence lifetimes, quantum yields and polarization spectra were measured for indole, 3-methylindole and 2,3-dimethylindole in non-polar solvents. The results indicate simultaneous emission from thermally equilibrated ¹L_a and ¹L_b levels, with ¹L_a→¹ A dominating the 2,3-dimethylindole emission, and ¹L_b→¹ A dominating the indole emission. These results are consistent with previous assignments of the 0-0 transitions in absorption for these compounds. Radiative rates are: ¹L_a→¹ A , 2·0 × 10⁸ S^-1 and ¹L_b→¹ A . 0·62 → 10⁸ S^-1. In addition, the temperature dependence of the excitation and emission spectra are presented, which show that aggregation occurs with these indoles in hydrocarbons below approximately - 110°C. Possible applications to tryptophyl emission in the hydrophobic interiors of proteins are briefly discussed.     

PHOTOPHYSICAL PROPERTIES OF NUCLEIC ACID COMPONENTS—II. EFFECT OF N, N'DIMETHYL SUBSTITUTION ON INTERSYSTEM CROSSING IN PYRIMIDINE BASES

Abstract— The intersystem crossing quantum yields to the lowest triplet states of N, N'dimethyluracil and N, N'dimethylthymine are 0.02 and ≥0.004, respectively. The very low yields are interpreted in terms of a ¹( n , π*) to ¹(π.π*) state order change compared with the unsubstituted parents.     

STUDIES ON THE TRIPLET EXCITED STATE OF 4-THIOURIDINE

Abstract— The absorption spectra, lifetimes, extinction coefficients and intersystem crossing quantum yields of the lowest triplet T ₁ of 4-thiouridine have been determined both in acetonitrile and in water. An ordering of ^1,3(n,π)* and ^1,3(π,π)* states is suggested. Triplet quenching rate constants with various pyrimidine bases or amino acids are reported.     

CHEMILUMINESCENT REACTIONS OF SO

Abstract— The rapid bimolecular reaction SO + O₃= SO₂+O₂+ 106 kcal/mole
yields electronically excited SO₂ in the ³B ₁ and ¹B₂ states with some vibrational excitation, as well as SO₂ in its electronic ground state. It is shown that k₁ = 1.5 x 10¹² exp (-2100/ RT ) cm² mole^-1 s-¹ and that the formation of electronically excited SO₂ involves higher activation energies.     

TRIPLET EXCITED STATES OF PYRIMIDINE NUCLEOSIDES AND NUCLEOTIDES

Abstract— The triplet absorption spectra, lifetimes, extinction coefficients, e_TT, and intersystem crossing quantum yields to the lowest triplet T₁, ø_T1, of thymidine, thymidine monophosphate, uridine and uridine monophosphate, have been determined in various solvents at 300 K.
The effect of H-bonding on ø_T1, of these nucleosides and nucleotides and also of uracil has been determined and discussed. This effect allows, an ordering of ^l,3 n, π* and ^1,3 π, π* states in protic and aprotic solvents.     

CHEMILUMINESCENCE AND THE FORMATION OF SINGLET OXYGEN IN THE OXIDATION OF CERTAIN POLYPHENOLS AND QUINONES

Abstract— The possibility of ¹O₂ (¹Δ_g) participation in the oxidation of polyphenols and quinones has been investigated in two systems: (1) the system involving autooxidation leading to oxidative polymerization and destruction, and (2) the modified Trautz-Schorigin reaction, i.e. oxidation of polyphenols and HCHO with H₂O₂ in concentrated alkaline solutions. The red band with maximum at 635 nm observed in chemiluminescence of pyrocatechol, adrenaline, pyrogallol, gallic acid, adrenochrome and p -benzoquinone corresponds to the transition 2O₂(¹Δ_g) → 2O₂(³Σ^-_g). Emission bands in the range 475–540 nm arise from the superposition of the 2O₂(¹Δ_g) → 2O₂(³Σ^-_g) transition and radiative deactivation of excited oxidation products. In system (2) chemiluminescence has a broad band from 580 nm beyond 800 nm and much higher intensity than in system (1). Formaldehyde was found to enhance light emission in system (1) by a factor of about 30. The influence of solvents, including D₂O in which ¹O₂ has varying lifetimes, on kinetics of chemiluminescence as well as quenching effect of β-carotene, hydroquinone, cysteine, bilirubin and biliverdin strongly support the involvement of ¹O₂ in the chemiluminescence of both systems.     

POTENTIAL PHOTOSENSITIZERS FOR PHOTODYNAMIC TUMOR THERAPY—I. PHOTOPHYSICAL PROPERTIES OF TWO CHLORIN DERIVATIVES

Abstract— Photophysical properties of two chlorin type molecules (CHLI) and (CHLII) were investigated in different solvents. Quantum yields of fluorescence φ_F of S, → T, intersystem crossing φ_T, and of singlet oxygen (¹Δ_g) formation φ_Δ, as well as the Stern-Volmer constants for the quenching of the S, states by oxygen and the bimolecular rate constants of quenching of ¹Δ_g by the chlorins were measured. The values of φ_T and φ_Λ can be given as 0.57 and 0.58 for CHLI and 0.69 and 0.58 for CHLII. The values of the fluorescence quantum yields, the strong absorption of the chlorins in the red (Λ > 630 nm) and the high values of the quantum yields for ¹Δ_g formation recommend the chlorin derivatives as potential markers and photosensitizers for tumor therapy.     

THE PHOTOPHYSICS OF p-AMINOBENZOIC ACID

Abstract— The lowest-lying allowed UV transition in p -aminobenzoic acid (PABA) is assigned Γ→¹L_a based on quantitative absorption and fluorescence studies, as well as semiempirical PM3 multielec-tron configuration interaction calculations. The oscillator strengths, fluorescence quantum efficiencies and lifetimes are reported for PABA in several polar, nonpolar, protic and aprotic solvents (aerated) at 296 K. Reasonable agreement is found between the observed radiative rate constant and that calculated from the absorption and fluorescence spectra. Shifts in the absorption and fluorescence spectra in aprotic solvents are analyzed in terms of the Onsager reaction field model; results are consistent with an increase in dipole moment of ca 4 D between the relaxed S₀ and S₁, states. No evidence is found for the emission from the amino-twisted form of PABA in all solvents studied although calculations show that the amino-twisted S, state is highly polar, but higher in energy by ca 35 kJ/mol ( in vacuo ). The fluorescence efficiency is excitation wavelength independent in both methylcyclohexane and water. The temperature dependence of the nonradiative rate constant (from S₁) was studied in several solvents. Nonradiative decay may be due to intersystem crossing, which would be fast enough to compete with thermally activated intramolecular NH₂ twisting. The phosphorescence spectrum and lifetime obtained in an EPA glass at 77 K are reported, and the triplet energy of PABA is estimated.     

SOLVENT EFFECTS ON THE PHOTOPHYSICAL PROPERTIES OF DIBUCAINE: A QUINOLINE ANALOGUE

Abstract— Emission and absorption spectra of neutral, monocation and dication dibucaine were recorded in hydrocarbon and hydroxylic solvents. The spectral analysis indicates that the lowest electronic states of dibucaine originate from the quinoline analogue in the molecule. The fluorescence and phosphorescence emission of neutral dibucaine in all solvents at 77 K are best assigned as resulting from ¹ n ,π* and ³π,π*, respectively, whereas those of both monocation and dication dibucaines are found to have ¹π,π* and ³π,π*. The monocation and neutral dibucaines in ethanol solutions were shown to give identical emission spectral properties, indicating that dibucaine-HCl in ethanol is H⁺ dissociative; this was confirmed by FT-IR studies. The possible explanations for the deprotonation of dibucaine-HCl in ethanol environments are discussed.     

Triplet Photoreactivity of the Diaryl Ketone Tiaprofenic Acid and Its Decarboxylated Photoproduct. Photobiological Implications

The 2-benzoylthiophene chromophore of the photosensitizing drug tiaprofenic acid and of its decarboxylated derivative is characterized by a unusually high energy gap between the T₁ (π,π*) and T₂ (n,π*) excited states, which makes this a unique system to study the intrinsic photo-reactivity of the two states. Weak fluorescence and phosporescence emission were detected at room temperature. Tiaprofenic acid undergoes photodecarboxylation from the triplet manifold as the main reaction. The photoprocess is temperature dependent with activation energy of 7–10 kcal/mol, close to the energy gap between T₁ and T₂. The decarboxylated product abstracts hydrogen in type I reactions. The involvement of T₂ in the above processes is proposed. Moreover the decarboxylated derivative exhibits reactivity toward phenols, consistent with a participation of the T₁ state as electron acceptor. The observed photoprocesses can account for biological photosensitization reactions, like membrane damage and protein modification.     

SPECTROSCOPY OF POLYENES–III. ABSORPTION AND EMISSION SPECTRAL INVESTIGATION OF POLYENE SCHIFF BASES AND PROTONATED SCHIFF BASES RELATED TO VISUAL PIGMENTS

Abstract— A number of n -butylamine Schiff bases of polyenals related to retinals as homologues and analogues, and their protonated forms, have been studied for absorption and emission spectral properties. The polyene Schiff bases exhibit the same general features in their absorption spectra as those of the parallel polyenals except that the ^lB_u←¹A_g and π*← n singlet transitions are at substantially higher energy in the Schiff bases (the shift being larger for the π *← n transition). The Schiff bases with short polyene chainlength ( n = 2, 3 where n is the number of double bonds including C=N) do not fluoresce or phosphoresce in 3-methylpentane in the temperature range 298–77 K. The Schiff bases with intermediate chainlength ( n = 4, 5) show fluorescence at 77 K with intensity strongly dependent on the nature of solvent. The Schiff bases with relatively long chainlength ( n = 5–7) show strong or moderately strong fluorescence at 77 K and very weak fluorescence at 298 K ( n = 7) with intrinsic radiative lifetimes much longer than those estimated from the oscillator strength of the low-energy, strong absorption band (¹B_u←¹ A_g ). A discussion on the possible state order and nature of the fluorescing state of the various polyene Schiff base systems is presented.     

EXCITED STATES AND REACTIVITY OF CARCINOGENIC BENZPYRENE; A COMPARISON WITH SKIN-SENSITIZING COUMARINS*

Abstract— Significant spectroscopic difference was found between the ³(π, π*) state of coumarins and the ³L_a state of benzpyrene. No analogy of the partially localized triplet state associated with the coumarin chromophore was revealed in the case of the potent carcinogen, benzo[a]pyrene. Instead, the ³L_a state of benzo[a]pyrene is characterized by more derealization than that of the non–carcinogenic benzo[e]pyrene. Therefore, the predominant photoreaction between benzo[a]pyrene and DNA bases does not seem to involve cycloaddition in contrast to the coumarin-pyrimidine system. Reactivity indices have been calculated, and results are consistent with recent experimental findings. In addition, spectroscopic properties of benzo[a]pyrene and benzo[e]pyrene have been comparatively described in terms of relatively high-resolution spectra, polarization measurements, and molecular orbital calculations.     

TIME RESOLVED STUDIES OF 1.27 μm LUMINESCENCE FROM SINGLET OXYGEN GENERATED IN HOMOGENEOUS and MICROHETEROGENEOUS FLUIDS

-The luminescence at 1.27 μm from the ³→→¹δ_g transition of the oxygen molecule has been detected from a variety of liquid systems. A Q-switched laser delivering pulses of 532 nm light was the excitation source, a germanium photodiode was the detector and substituted porphyrins were used as photosensitizers. Protio- and deutero- forms of several solvents were studied and the singlet oxygen lifetimes determined directly agreed well with published values. T_δ in D₂O was found to be 55 μs and, by extrapolation from a series of H₂O - D₂O mixtures, a value of 3.3 μs was obtained for T_δ in H₂O. The technique was shown to be useful in measuring T_δ values in several microheterogeneous systems such as surfactant micelles, vesicles and human serum albumin.     

LUMINESCENCE AND PHOTOCHEMISTRY OF 4-THIOURIDINE IN AQUEOUS SOLUTION

Abstract— In bidistilled water, 4-thiouridine (4TU) exhibits a weak unusual luminescence, the quantum yield of which is 3 × 10^-4 at 25°C. The excitation spectrum corresponds well to the 4TU absorption spectrum. The emission lies at longer wavelengths (Λ_max 550 nm) than the 4TU phosphorescence observed at 77 K (Λ_max, 470–480 nm). From the emission signal obtained after an excitation flash of 3 ns half-width, an "apparent" rate constant for the radiative deactivation process, shorter than 5 × 10⁶ s, can be inferred. The 300 K emission is efficiently quenched by halides and by oxygen: quenching involves a long-lived intermediate (⋍ 200 ns).
Clearly the emissive state X is populated through the S₀-S₁ electronic transition π→π* of 4TU. The nature of X cannot be unambiguously determined: it cannot be an excimer but can be either the 4TU triplet state or another chemical state distinct from the 4TU excited singlet or triplet states.
An interesting finding is that the 300 K emission and the ability of 4TU to photoreact are related: they are quenched with the same efficiency by halide anions. This indicates that quenching occurs at the same long-lived intermediate species , which is either a precursor of the emitter or the emitter itself.     

EFFECT OF TEMPERATURE AND pH ON THE QUENCHING OF TRIPLET LUMIFLAVIN IN THE PRESENCE AND ABSENCE OF FERRI- AND FERROCYANIDE

Abstract— –Flash photolysis at 450 nm over the temperature range 0.8–60°C was used to determine Arrhenius parameters for the first and second order disappearance of triplet lumiflavin (1.66 µ .M ) at a flash energy of 2 kj in deaerated phosphate buffer at varying pH:
³Lf → Lf₀
³Lf +³Lf → Lf₀+ Lf₀
Arrhenius parameters were also determined for the pseudo first-order quenching of triplet lumiflavin by 10 µ M ferri- and ferrocyanide ions,
³Lf + Fe³⁺→ Fe³⁺→ Lf₀+ Fe³⁺ (energy transfer)
³Lf + Fe²⁺→ Lf^-+ Fe³⁺ (electron transfer)
and for disappearance of the semireduced lumiflavin in the presence of ferrocyanide at pH 6.8, by the second-order reaction
Lf^-+Lf ^-→ Lf₀+ Lf⁼.     

THE IN VITRO PHOTOCHEMISTRY OF BIOLOGICAL MOLECULES—II. THE TRIPLET STATES OF β-CAROTENE AND LYCOPENE EXCITED BY PULSE RADIOLYSIS

Abstract— –Pulse radiolysis has been used to excite the triplet states of β-carotene (τ# 9μ sec) and lycopene (τ= 8μsec) in hexane solution, both in the presence and absence of naphthalene as a triplet sensitiser. The absorption spectra of both triplets have been measured in the range 430–550 nm and have thus been extended into the region of the corresponding singlet absorptions. The overlap of the triplet and singlet spectra is discussed in relation to in vivo studies. Extinction coefficients of 1.3±0.1 × 10⁵ l/mole cm for β-carotene triplet 515 nm and 3.9±0.2 × 10⁵ l/mole cm for lycopene triplet at 525 nm were obtained. Isomerisation of the all- trans polyenes used was detected and preliminary measurements indicate that the yield of isomerisation was greater than the triplet yield. The rate of triplet energy transfer from naphthalene to β-carotene was estimated to be 1.5 × 10¹⁰ l/mole sec. The corresponding value for lycopene was 1.4× 10¹⁰ l/mole sec. The measured efficient quenching of triplet β-carotene by oxygen may occur by an energy transfer mechanism, leading to the formation of singlet oxygen (¹Δ_g. This would suggest that the triplet energy level of β-carotene lies between 121 and 94 kJ mole^-1.     

ROSEOFLAVIN AS A BLUE LIGHT RECEPTOR ANALOG: SPECTROSCOPIC CHARACTERIZATION

Abstract— The blue light absorption band of roseoflavin is polarized along the axis roughly connecting N₃-C₈ positions. A weak, second π→π* transition with a polarization angle of ca. 25° is hidden under the short wavelength side of the blue absorption band. The excited state of roseoflavin is somewhat more basic than the ground state, by a 1.5 p K _a unit. The fluorescence quantum yield and lifetime of roseoflavin are substantially lower than those of other flavins, thus making it kinetically less efficient as a blue light photoreceptor.     

FORMATION AND CHEMILUMINESCENT DECOMPOSITION OF DIOXETANES IN THE GAS PHASE

Abstract— High resolution chemiluminescence spectra have been obtained of the singlet electronically excited products of O₂(¹Δ) plus alkene, dioxetane forming, reactions. The experiments were conducted in a flow apparatus at pressures of 1–5 torr. The spectra are a measure of the unrelaxed initial distribution of energy in the excited product. Results are reported for ethylene, 1, 1-difluoroethylene. methyl vinyl ether, ethyl vinyl ether, n -butyl vinyl ether, ketene, ketene-d₂, allene, unsymdimethyl allene, dimethyl ketene, 2-methoxy propene, 1-ethoxy propene, 2-bromo propene, and N, N- dimethyl isobutenyl amine. Chemiluminescence activation energies, representing the cycloaddition process, and absolute quantum yields for singlet excited product, ranging from 10^--⁴ to 2.5 × 10^--². are reported for 10 alkenes. Several of the reactions, 1,1-difluoroethylene, ketene, ethylene and allene give formaldehyde ¹ nπ* product with excess vibrational-rotational energy and a higher quantum yield than reactions not displaying this phenomenon. This is an indication of at least partially statistical partitioning of the energy in excess of that needed to electronically excite the formaldehyde. The experiments with ketene and ketene-d₂ provide the first evidence for the existence of unsubstituted 1,2-dioxetanone. The results from several of the experiments, particularly those with 2-methoxy propene and I-ethoxy propene are consistent with the mechanism of Goddard, which predicts regioselective and stereoselective attack of O₂(¹Δ) upon alkoxy substituted alkenes having allylic hydrogen.     

THE QUENCHING OF SINGLET OXYGEN BY AMINO ACIDS AND PROTEINS

Abstract— The physical quenching of singlet molecular oxygen (¹Δ_g) by amino acids and proteins in D₂O solution has been measured by their inhibition of the rate of singlet oxygen oxidation of the bilirubin anion. Steady-state singlet oxygen concentrations are produced by irradiating the oxygenated solution with the 1–06 μm output of a Nd-YAG laser, which absorbs directly in the electronic transition ¹Δ_g+ 1 v →³Σ_g^-. The rate of quenching by most of the proteins studied is approximated by the sum of the quenching rates of their amino acids histidine, tryptophan and methionine, which implies that these amino acids in the protein structure are all about equally accessible to the singlet oxygen. The quenching constants differ from those obtained by the ruby-laser methylene-blue-photosensitized method of generating singlet oxygen, or from the results of steady-state methylene-blue-photosensitized oxidation, where singlet oxygen is assumed to be the main reactive species. The singlet oxygen quenching rates in D₂O, pD 8, are (10⁷ℒ mol^-1 s^-1): alanine 0–2, methionine 3, tryptophan 9, histidine 17, carbonic anhydrase 85, lysozyme 150, superoxide dismutase 260, aposuperoxide dismutase 250.