Inducement and stabilization of G-quadruplex DNA by a thiophene-containing dinuclear ruthenium(II) complex

G-quadruplex structures are attractive targets for the development of anticancer drugs, as their formation in human telomere could impair telomerase activity, thus inducing apoptosis in cancer cells. In this work, a thiophene-containing dinuclear ruthenium(II) complex, [Ru₂(bpy)₄(H₂bipt)]⁴⁺ {bpy = 2,2′-bipyridine, H₂bipt = 2,5-bis[1,10]phenanthrolin[4,5-f]-(imidazol-2-yl)thiophene}, was prepared and the interaction between the complex and human telomeric DNA oligomers 5′-G₃(T₂AG₃)₃-3′ (HTG21) has been investigated by UV-Vis, fluorescence and circular dichroism (CD) spectroscopy, fluorescence resonance energy transfer (FRET) melting assay, polymerase chain reaction (PCR) stop assay, fluorescent intercalator displacement (FID) titrations, Job plot and color reaction studies. The results indicate that the complex can well induce and stabilize the formation of antiparallel G-quadruplex of telomeric DNA in the presence or absence of metal cations, and the ΔT_m value of the G-quadruplex DNA treated with the complex was obtained to be 12.8 °C even at levels of 50-fold molar of duplex DNA (calf-thymus DNA), suggesting that the complex exhibits higher G-quadruplex DNA selectivity over duplex DNA. The complex shows high interaction ability with G-quadruplex DNA at (1.17 ± 0.12) × 10⁷ M^?1 binding affinity using a 2:1 [complex]/[quadruplex] binding mode ratio. A novel visual method has been developed here for making a distinction between G-quadruplex DNA and duplex DNA by our ruthenium complex binding hemin to form the hemin-G-quadruplex DNAzyme.     

Photoluminescent and electrochemiluminescent dual-signaling probe for bio-thiols based on a ruthenium(II) complex

Photoluminescence (PL) and electrochemiluminescence (ECL) detection techniques are highly sensitive and widely used methods for clinical diagnostics and analytical biotechnology. In this work, a unique ruthenium(II) complex, [Ru(bpy)₂(DNBSO-bpy)](PF₆)₂ (bpy: 2,2′-bipyridine; DNBSO-bpy: 2,4-dinitrobenzenesulfonate of 4-(4-hydroxyphenyl)-2,2′-bipyridine), has been designed and synthesized as a highly sensitive and selective PL and ECL dual-signaling probe for the recognition and detection of bio-thiols in aqueous media. As a thiol-responsive probe, the complex can specifically and rapidly react with bio-thiols in aqueous solutions to yield a bipyridine-Ru(II) complex derivative, [Ru(bpy)₂(HP-bpy)]²⁺ (HP-bpy: 4-(4-hydroxyphenyl)-2,2′-bipyridine), accompanied by the remarkable PL and ECL enhancements. The complex was used as a probe for the PL and ECL detections of cysteine (Cys) and glutathione (GSH) in aqueous solutions. The dose-dependent PL and ECL enhancements showed good linear relationships against the Cys/GSH concentrations with the detection limits at nano-molar concentration level. Moreover, the complex-loaded HeLa cells were prepared for PL imaging of the endogenous intracellular thiols. The results demonstrated the practical utility of the complex as a cell-membrane permeable probe for PL imaging detection of bio-thiols in living cells.     

Binuclear ruthenium(II) pyridazine complex catalyzed transfer hydrogenation of ketones

A convenient and general method of synthesis of binuclear ruthenium(II) pyridazine complex was reported. The synthesized complex was characterized by analytical and spectral methods. The structure of the complex was confirmed by X-ray diffraction technique and was found to be an efficient catalyst for the transfer hydrogenation of ketones with excellent conversions in the presence of isopropanol/KOH at 82 °C. The effect of solvents, bases, and different catalyst/substrate ratio for the reaction was also investigated.     

Synthesis,structural characterization,oxygen sensitivity,and antimicrobial activity of ruthenium(II) carbonyl complexes with thiosemicarbazones

[Ru(CO)(PPh₃)₂(η³-O,N³,S-TSC¹)] (1), [Ru(Cl)(CO)(PPh₃)₂(η²-N³,S-TSC²)] (2), and [Ru(Cl)(CO)(PPh₃)₂(η²-N³,S-TSC³)] (3) have been prepared by reacting [Ru(H)(Cl)(CO)(PPh₃)₃] with the respective thiosemicarbazones TSC¹ (2-hydroxy-3-methoxybenzaldehyde thiosemicarbazone), TSC² (3-hydroxybenzaldehyde thiosemicarbazone), and TSC³ (3,4-dihydroxybenzaldehyde thiosemicarbazone) in a 1?:?1 M ratio in toluene and all of the complexes have been characterized by UV–vis, FT-IR, and ¹H and ³¹P NMR spectroscopy. The spectroscopic studies showed that TSC¹ is coordinated to the central metal as a tridendate ligand coordinating via the azomethine nitrogen (C=N), phenolic oxygen, and sulfur to ruthenium in 1, whereas TSC² and TSC³ are coordinated to ruthenium as a bidentate ligand through azomethine nitrogen (C=N) and sulfur in 2 and 3. Oxygen sensitivities of 1–3 and [Ru(Cl)(CO)(PPh₃)₂(η²-N³,S-TSC⁴)] (4), and antimicrobial activities of 1–3 have been determined.     

Enhanced oxygen sensing properties of Pt(II) complex and dye entrapped core-shell silica nanoparticles embedded in sol-gel matrix

This paper presents a highly sensitive oxygen sensor that comprises an optical fiber coated at one end with platinum(II) meso-tetrakis(pentafluorophenyl)porphyrin (PtTFPP) and PtTFPP entrapped core-shell silica nanoparticles embedded in an n-octyltriethoxysilane (Octyl-triEOS)/tetraethylorthosilane (TEOS) composite xerogel. The sensitivity of the optical oxygen sensor is quantified in terms of the ratio I₀/I₁₀₀, where I₀ and I₁₀₀ represent the detected fluorescence intensities in pure nitrogen and pure oxygen environments, respectively. The experimental results show that the oxygen sensor has a sensitivity (I₀/I₁₀₀) of 166. The response time was 1.3 s when switching from pure nitrogen to pure oxygen, and 18.6 s when switching in the reverse direction. The experimental results show that compared to oxygen sensors based on PtTFPP, PtOEP, or Ru(dpp)₃²⁺ dyes, the proposed optical fiber oxygen sensor has the highest sensitivity. In addition to the increased surface area per unit mass of the sensing surface, the dye entrapped in the core of silica nanoparticles also increases the sensitivity because a substantial number of aerial oxygen molecules penetrate the porous silica shell. The dye entrapped core-shell nanoparticles is more prone to oxygen quenching.     

Photoluminescent and oxygen sensing properties of core–shell nanospheres based on a covalently grafted ruthenium(II) complex

SiO₂ nanospheres coated with silica chemically doped with a ruthenium complex [Ru(Bphen)₂Phen? Si]Cl₂ (denoted as Ru, there Bphen = 4,7‐diphenyl‐1,10‐phenanthrolin, Phen? Si = modified 1,10‐phenathroline) were prepared using a simple solution‐based method. Field‐emission scanning electron microscopy (FE‐SEM) showed that the pure SiO₂ nanospheres with a mean diameter of ～185 nm were successfully coated with Ru complex–chemically doped SiO₂ shell with a thickness of ～45 nm. The obtained core‐shell nanosphere materials exhibited bright red triplet metal‐to‐ligand charge transfer (³MLCT) emission, and their photoluminescent intensity was sensitive to oxygen concentration. These properties make them promising candidates for biomarkers and optical oxygen sensors, which can measure the O₂ concentration in biological fluids. Copyright © 2010 John Wiley & Sons, Ltd.     

DNA interaction studies of ruthenium(II) polypyridyl complex : [Ru(dmb)2(ITAP)](ClO4)2 (ITAP = isatino [1,2-b]-1,4,8,9-tetraazatriphenylene)

A new ligand ITAP and its complex [Ru(dmb)₂(ITAP)](ClO₄)₂ (ITAP = isatino [1,2-b]-1,4,8, 9-tetraazatriphenylene, dmb = 4,4′-dimethyl-2,2′-bipyridine) have been synthesized and characterized by elemental analysis, Fast atom bombardment mass spectra, Electrospray mass spectra, and ¹H NMR. Thermal denaturation and absorption titration experiments show the complex binds to calf thymus DNA (CT-DNA) with moderate affinities. Viscosity measurements and thermal denaturation indicate that the DNA-binding mode could be intercalative interaction. The Ru(II) complex in the presence of plasmid pBR322 DNA has been found to promote the cleavage of plasmid pBR322 DNA from the supercoiled Form I to the open circular Form II upon irradiation. Mechanisms for DNA cleavage by the complex were also investigated.     

Synthesis of a ruthenium(II) polypyridine complex with 1,10-phenanthrolineselenazole as ligand and investigation of its G-quadruplex DNA-binding properties

A new Ru(II) complex, [Ru(bpy)₂L](ClO₄)₂ (bpy?=?2,2′-bipyridine, L?=?1,10-phenanthrolineselenazole), has been synthesized and structurally characterized by elemental analysis, ESI-MS, and ¹H NMR. The interaction of human telomeric oligomer 5′-AG₃(T₂AG₃)₃-3′ with the Ru(II) complex was explored by competition FRET experiment, ?uorescence titration, circular dichroism spectroscopy, thermal denaturation, polymerase chain reaction stop assay, and TRAP assay. The Ru(II) complex can selectively bind to G-quadruplex DNA. The results indicated that the complex not only induces a remarkable conformational change of human telomeric DNA, but also has the ability to stabilize the G-quadruplex.     

Synthesis,characterization, and antitumor properties of ruthenium(II) anthraquinone complexes

Three new Ru(II) complexes, [Ru(dmb)₂(ipad)](ClO₄)₂ (dmb = 4,4′-dimethyl-2,2′-bipyridine, ipad = 2-(anthracene-9,10-dione-2-yl) imidazo[4,5-f][1,10]phenanthroline, 1), [Ru(dmp)₂(ipad)](ClO₄)₂ (dmp = 2,9-dimethyl-1,10-phenanthroline, 2), and [Ru(dip)₂(ipad)](ClO₄)₂ (dip = 4,7-diphenyl-1,10-phenanthroline, 3), have been synthesized and characterized. The three Ru(II) complexes intercalate with the base pairs of DNA. The in vitro antiproliferative activities and apoptosis-inducing characteristics of these complexes were investigated. The complexes exhibited cytotoxicity against various human cancer cell lines. BEL-7402 cells displayed the highest sensitivity to 1, accounted for by the greatest cellular uptake. Complex 1 was shown to accumulate preferentially in the nuclei of BEL-7402 cells and cause DNA damage and induce apoptosis, which involved cell cycle arrest and reactive oxygen species generation.     

The interaction of a novel ruthenium (II) complex with self‐assembled DNA film on silicon surface

Calf thymus DNA (ct‐DNA) films were immobilized onto patterned silicon wafers through electrostatic self‐assembly technology and interacted with a novel dinuclear ruthenium (II) complex, [(bpy)₂Ru(H₂bpi)Ru(bpy)₂](ClO₄)₄, which were demonstrated by using a confocal optical microscope. The morphology of the DNA film was measured by atomic force microscopy and the results show that the DNA strands have been folded into coiled conformations and aggregated into circles with diameters between 18 and 55 nm. The interaction process was also monitored by UV‐visible and fluorescence spectra and investigated by X‐ray photoelectron spectra. The results show that the Ru (II) complex interacts with ct‐DNA by the intercalative mode as it behaves in aqueous solutions. Copyright © 2006 John Wiley & Sons, Ltd.     

Sorption of iron(II) and ruthenium(III)-triazine complexes on silica gel and its analytical applicability

2,4,6-Tri(2′-pyridyl)-s-triazine (TPTZ) complexes with iron(II) and ruthenium(III) were prepared. Their sorption and desorption features on silica gel have been investigated. Both complexes were strongly adsorbed. This has been utilized for separating and preconcentrating iron(II) and ruthenium(III) using TPTZ-impregnated silica gel. The chromatographic behavior of TPTZ on silica gel column was examined and found to be effective modifier for silica gel surface. The sorption capacity of silica gel for those metal-triazine complexes has been determined under static conditions and was found to be 5.28 × 10^–3 mM (Fe(TPTZ)₂²⁺) and 2.9 × 10^–3 mM (Ru(TPTZ)₂³⁺). Saturated methanolic solutions of KI or 25% NaClO₄ solutions desorbed both complexes quantitatively from the silica gel surface.     

Synthesis and characterization of a mononuclear ruthenium(III) triazole complex

A mononuclear ruthenium(III) complex containing ethylenediaminetetraacetate (edta), [Ru(Hedta)(Htrz)] · 4H₂O (1) (Htrz = 1H-1,2,4-triazole), has been synthesized and the structure was determined by single-crystal X-ray diffraction. The complex crystallizes in the triclinic space group P 1, with the unit cell parameters a = 7.212(3) Å, b = 9.873(4) Å, c = 13.806(6) Å, α = 91.945(6)°, β = 100.078(6)°, γ = 97.230(7) and Z = 2. The complex was also characterized by elemental analysis, IR, UV–Vis and ESR spectra. Cyclic voltammetry for the complex shows a ruthenium(III)/ruthenium(IV) oxidation and a ruthenium(III)/ruthenium(II) reduction within the range of ?1.5–0.5 V. Magnetic susceptibility data give an effective moment of 1.81 B.M. at room temperature.     

Effects of the ancillary ligands of polypyridyl ruthenium(II) complexes on the DNA-binding and photocleavage behaviors

The new polypyridyl ligand MIP {MIP = 2-(2,3-methylenedioxyphenyl)imidazo[4,5-f]1,10-phenanthroline} and its ruthenium(II) complexes [Ru(phen)₂(MIP)]²⁺ (1) (phen = 1,10-phenanthroline) and [Ru(dmp)₂(MIP)]²⁺ (2) (dmp = 2,9-dimethyl-1,10-phenanthroline) were synthesized and characterized by elemental analysis, MS and ¹H NMR spectroscopy. The DNA-binding properties of the two complexes to calf-thymus DNA (CT-DNA) were investigated by different spectrophotometric methods and viscosity measurements, as well as equilibrium dialysis and circular dichroism spectroscopy. The results suggest that complex 1 binds to CT-DNA through intercalation, and complex 2 binds to CT-DNA via a partial intercalative mode. This difference in binding mode probably is caused by the different ancillary ligands. Also, when irradiated at 400 nm, complex 1 was found to be a more-effective DNA-cleaving agent than complex 2.     

The DNA-binding behavior and DFT calculation of ruthenium(II) complexes [Ru(phen)2L](ClO4)2 (L = HMOPIP and MOHPIP)

Two ruthenium(II) complexes, [Ru(phen)₂HMPIP]²⁺ (1) and [Ru(phen)₂MHPIP]²⁺ (2), have been synthesized and characterized by elemental analysis, ESI-MS, and ¹H NMR spectroscopy. The DNA-binding properties of 1 and 2 have been investigated by electronic and emission spectra and viscosity experiments. The results show that both 1 and 2 can bind to DNA in intercalating mode, with 1 exhibiting stronger binding affinity. These were confirmed by the strong hypochromism at IL and MLCT absorption bands in both complexes when DNA was added into solution, and the increase in relative viscosity of CT-DNA in the presence of both complexes. Moreover, the calculated intrinsic binding constant for 1 and 2 from the decay of electronic spectra is 3.82 × 10⁵ and 2.06 × 10⁵ M^?1, respectively. Finally, the effects of the substituent groups on the DNA-binding behavior of ruthenium(II) complexes have also been rationally discussed by computer calculation of density functional theory (DFT) methods.     

Synthesis and characterization of Co(II), Ni(II), Zn(II) and Cu(II) complexes with a new tetraazamacrocyclic Schiff base ligand containing a piperazine moiety: X-ray crystal structure determination of the Co(II) complex

Two macrocyclic Schiff base ligands, L¹ [1+1] and L² [2+2], have been obtained in a one-pot cyclocondensation of 1,4-bis(2-formylphenyl)piperazine and 1,3-diaminopropane. Unfortunately, because of the low solubility of both ligands, their separation was unsuccessful. In the direct reaction of these mixed ligands (L¹ and L²) and the appropriate metal ions only [CoL¹(NO₃)]ClO₄, [NiL¹](ClO₄)₂, [CuL¹](ClO₄)₂ and [ZnL¹(NO₃)]ClO₄ complexes have been isolated. All the complexes were characterized by elemental analyses, IR, FAB-MS, conductivity measurements and in the case of the [ZnL¹(NO₃)]ClO₄ complex with NMR spectroscopy.     

Synthesis of tridentate 2,6-bis(imino)pyridyl aminechlorohydro ruthenium(II) complexes: The convenient use of amine hydrochlorides to generate metal-hydride

The reaction of low-valent ruthenium complexes with 2,6-bis(imino)pyridine ligand, [η²-N₃]Ru(η⁶-Ar) (1) or {[N₃]Ru}₂(μ-N₂) (2) with amine hydrochlorides generates six-coordinate chlorohydro ruthenium (II) complexes with amine ligands, [N₃]Ru(H)(Cl)(amine) (4). Either complex 1 or 2 activates amine hydrochlorides 3, and the amines coordinate to the ruthenium center to give complex 4. This is a convenient and useful synthetic approach to form ruthenium complexes with amine and hydride ligands using amine hydrochloride.     

Effect of the ancillary ligands on the binding of ruthenium(II) complexes [Ru(dmp)2(MCMIP)]2+ and [Ru(dmb)2(MCMIP)]2+ with DNA

Two polypyridine ruthenium(II) complexes, [Ru(dmp)₂(MCMIP)]²⁺ (1) (MCMIP = 2-(6-methyl-3-chromonyl)imidazo[4,5-f][1,10]-phenanthroline, dmp = 2,9-dimethyl-1,10-phenanthroline) and [Ru(dmb)₂(MCMIP)]²⁺ (2) (dmb = 4,4′-dimethyl-2,2′-bipyridine), have been synthesized and characterized by elemental analysis, ES-MS and ¹H NMR. The DNA-binding behaviors of these complexes were investigated by electronic absorption titration, fluorescence spectroscopy, viscosity measurements and thermal denaturation. The results show that 1 and 2 effectively bind to CT-DNA; the DNA-binding affinities are closely related to the ancillary ligand.     

一种新型联吡啶钌配合物的合成及电致化学发光性能研究

本文合成了一种多联吡啶钌配合物(bpy)2Ru(phenCl4)(PF6)2,bpy为2,2′-联吡啶, phenCl4为3,4,7,8-四氯-1,10-邻菲罗啉,并用元素分析、红外光谱、核磁共振谱对其结构进行了表征。此化合物在紫外和可见光区都有吸收,在可见光区的最大吸收波长是440nm,这是典型的金属到配体（MLCT）的跃迁,其光致发光性能也显示出MLCT迁移特征,并且随溶剂不同,其最大发射波长从630nm变化到649nm。值得注意的是,此配合物的电致化学发光性能受pH影响不大,这与传统的随pH增大电致化学发光强度增大的联吡啶钌不同,尤其在强碱条件下,其背景电致化学发光很小。     

DNA-binding and cleavage activity of polypyridyl ruthenium(II) complexes

Polypyridyl ruthenium(II) complexes [Ru^II(3-bptpy)(dmphen)Cl]ClO₄ (1), [Ru^II(3-cptpy)(dmphen)Cl]ClO₄ (2), [Ru^II(2-tptpy)(dmphen)Cl]ClO₄ (3), and [Ru^II(9-atpy)(dmphen)Cl]ClO₄ (4) {where 3-bptpy?=?4′-(3-bromophenyl)-2,2′:6′,2″-terpyridine, 3-cptpy?=?4′-(3-chlorophenyl)-2,2′:6′,2″-terpyridine, 2-tptpy?=?4′-(2-thiophenyl)-2,2′:6′,2″-terpyridine, 9-atpy?=?4′-(9-anthryl)-2,2′:6′,2″-terpyridine, dmphen?=?2,9-dimethyl-1,10-phenanthroline} have been synthesized and characterized. The DNA-binding properties of the complexes with Herring Sperm DNA have been investigated by absorption titration and viscosity measurements. The ability of complexes to break the pUC19 DNA has been checked by gel electrophoresis. The experimental results suggest that all the complexes bind DNA via partial intercalation. The results also show that the order of DNA-binding affinities of the complexes is 4?<?3?<?2?<?1, confirming that planarity of the ligand in a complex is very important for DNA-binding.