Distonoid ions

By Yates, Bouma, and Radom's definition, distonic radical ions are those formally arising by ionization of diradicals or zwitterionic molecules (including ylides). These ions differ, therefore, from conventional radical ions by displaying the charge site and unpaired electron site (spin) localized mandatorily on separate atoms or group of atoms; that is, these sites are separated in all of their major resonance forms. Many conventional radical ions with a major resonance form in which charge and spin sites reside formally on the same atom or group of atoms display, however, high degree of discretionary (non-mandatory) charge-spin separation. By analogy with the metal/metalloid terminology, we propose that these distonic-like radical ions be classified as distonoid ions. Radical ions would, therefore, be divided into three sub-classes: conventional, distonic, and distonoid ions. B3LYP/6-311 + G(d,p) calculations for a proof-of-principle set of radical cations are used to demonstrate the existence of many types of distonoid ions with a high degree of discretionary charge-spin separation. Reliable calculations are indispensable for probing distonoid ions, since an ion that was expected to be distonoid (by the analysis of its resonance forms) is shown by the calculations to display a characteristic conventional-ion electronic distribution. Similarly to many distonic radical ions, and in sharp contrast to a conventional radical ion (ionized 1,4-dioxane), the gas-phase intrinsic bimolecular reactivity with selective neutrals of a representative distonoid ion, ionized 2-methylene 1,3-dioxolane, is found to include dual ion-radical type reactions.     

Discharge of nickel ions in presence of zinc ions

Summary The present results confirm conclusively the inference drawn earlier [2] regarding the role of adsorption of zinc ions on the basis of galvanostatic studies on solid substrates which is also the conclusion drawn by Yurev and Volkov [3] by their recent work on solid substrates.

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Zusammenfassung Bei galvanostatischen Untersuchungen an festen Medien über die Bedeutung der Adsorption von Zinkionen konnten die Ergebnisse einer früheren eigenen Arbeit [2] sowie der Arbeit von Yurev u. Volkov [3] bestätigt werden. Aufgrund potentiodynamischer und potentiostatischer Versuche mit der Quecksilber-Tropfelektrode konnte festgestellt werden, daß die Abscheidungsgeschwindigkeit von Nickel aus Nickelbädern durch Zusatz von Zinkionen herabgesetzt wird. Die Vorteile einer Quecksilber-Tropfelektrode für solche Untersuchungen werden aufgezeigt und interessante Besonderheiten im Verhalten der Strom-Zeit-Kurve während des Wachstums des Tropfens diskutiert.

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Dedicated to Prof. Dr. M. von Stackelberg on his 70th birthday.     

Fragmentation of electrospray-produced oligodeoxynucleotide ions adducted to metal ions

In this article, we describe the unique fragmentations of oligodeoxynucleotides (ODNs) whose phosphate groups are completely depleted of protons and replaced with metal ions. The production of the ubiquitous [a(n) - base] ions still occurs, but no longer by transfer of an acidic phosphate proton to an adjoining 3' base. Nor is the extent of the reaction determined by the proton affinity of that base. Rather, the reaction now occurs via a cleavage 3' to both pyrimidines and purines; cleavage 3' to pyrimidine is more favorable than that 3' to purine. We also demonstrate that an ODN is more stable in the gas phase when its phosphate groups are bound to metal ions than when its phosphate groups are attached to hydrogens. This study also provides further evidence for the ODN fragmentation mechanism that involves H transfer to a nucleobase. To establish the structural utility of this new fragmentation, we applied it to distinguishing small ODNs containing a photomodified cis,syn-cyclobutane pyrimidine dimer from the parent ODNs, a system that cannot be distinguished by collisional activation of precursor species that do not contain metal ions.     

Formation of iminium ions by fragmentation of a2 ions

Tandem mass spectrometric experiments have been carried out on the protonated amides H-Gly-Ala-NH2, H-Ala-Gly-NH2, H-Ala-Val-NH2, H-Val-Ala-pNA, H-Leu-Phe-NH2, H-Phe-Leu-NH2, H-Phe-Tyr-NH2 and H-Tyr-Phe-NH2 with particular emphasis on the fragmentation of the isomeric a2 ions derived therefrom. Primary fragmentation reactions of the protonated amides involve formation of the y1" and b2 ions with further fragmentation of the b2 ion to form the a2 ion which fragments to form iminium ions. Collision-induced dissociation studies of the mass-selected a2 ions were carried out. For the Gly-Ala, Ala-Gly and Val-Ala a2 ions, weak signals were observed corresponding to loss of CO from the a2 ion. With the exception of the Gly-Ala, Ala-Gly and Val-Ala a2 ions, both possible iminium ions (a1 and the internal iminium ion) are observed with the most abundant being that formed by proton attachment to the imine of higher proton affinity. The results provide strong support for the recently proposed (El Aribi et al. J. Am. Chem. Soc. 2003; 125: 9229) mechanism of fragmentation of a2 ions which involves elimination of CO from the a2 ion to form a proton-bound complex of two imines. Based on this mechanism ab initio calculations of the total energies of the a2 ions and the transition states for fragmentation have been carried out giving the energy barrier for fragmentation of each a2 ion. The experimental results are interpreted in terms of these energetics data, unimolecular rate constants calculated by using the RRKM theory, and the imine proton affinities.     

Charge reversal of three alkylamide ions: Free nitrenium ions

The methylnitrenium, ethylnitrenium and dimethylnitrenium ions are prepared by charge reversal collisional activation (CR CA) of the corresponding negative ions; their collisional activation mass spectra are shown to support the assigned structures. MINDO/3 energies are used to evaluate relative energies of [CH₄N]⁺ and [C₂H₆N]⁺ isomers, and to determine whether unstable forms rearrange spontaneously to stable ones. As in other examples, charge reversal here generates cations that do not exist in an energy well, but their transient existence is established because their fragmentation is more rapid than their rearrangement to a more stable form.     

Gaseous alkyne ions

Using the relative abundance of metastable ions, collisional activation spectra, field ionization kinetic measurements, isotopic labelling, appearance energy and kinetic energy release data, it is shown that linear alkyne radical cations with more than six carbon atoms do not isomerize to equilibrating structures prior to decomposition. At the shortest ion lifetimes the molecular ions of linear alkynes decompose mainly by simple β-bond fission which allows an unequivocal localization of the triple bond. At medium ion lifetimes fragmentation occurs predominantly via a McLafferty rearrangement, while at long ion lifetimes competing alkyl losses prevail. These alkyl losses occur via cyclic intermediates leading to thermochemically stable cycloalkenyl ions. All these reactions occur with a high specificity with respect to the carbon and hydrogen atoms involved and are preceded by little or no hydrogen exchange reactions.     

Covalent modification of gaseous peptide ions with N-hydroxysuccinimide ester reagent ions

Covalent modification of primary amine groups in multiply protonated or deprotonated polypeptides in the gas phase via ion/ion reactions is demonstrated using N-hydroxysuccinimide (NHS) esters as the modifying reagents. During the ion/ion reaction, the peptide analyte ions and the NHS or sulfo-NHS based reagent form a long-lived complex, which is a prerequisite for the covalent modification chemistry to occur. Ion activation of the peptide-reagent complex results in a neutral NHS or sulfo-NHS molecule loss, which is a characteristic signature of covalent modification. As the NHS or sulfo-NHS group leaves, an amide bond is formed between a free, unprotonated, primary amine group of a lysine side chain in the peptide and the carboxyl group in the reagent. Subsequent activation of the NHS or sulfo-NHS loss product ions results in sequence informative fragment ions containing the modification. The N-terminus primary amine group does not make a significant contribution to the modification process; this behavior has also been observed in solution phase reactions. The ability to covalently modify primary amine groups in the gas phase with N-hydroxysuccinimide reagents opens up the possibility of attaching a wide range of chemical groups to gaseous peptides and proteins and also for selectively modifying other analytes containing free primary amine groups.     

Benzylic cations with triplet ground states: computational studies of aryl carbenium ions, silylenium ions, nitrenium ions, and oxenium ions substituted with meta pi donors

Density functional theory (B3LYP/6-31G(d,p)) was used to predict the effect of meta substitution on aryl cationic (Ar-X+) species, including aryloxenium ions, arylsilylenium ions, arylnitrenium ions, and arylcarbenium ions. Multireference second-order perturbation theory (CASPT2) calculations were used to benchmark the quantitative accuracy of the DFT calculations for representative systems. Substituting the meta positions on these species with pi donors stabilizes a pi,pi* diradical state analogous to the well-known m-xylylene diradical. Notably, the 3,5-bis(N,N-dimethylamino)benzyl cation is predicted to have a triplet ground state by 1.9 kcal/mol by DFT and to have essentially degenerate singlet-triplet states at the CASPT2(10,9) level of theory. Adding electron-withdrawing CF3 groups to the exocyclic carbon of this meta-disubstituted benzyl cation further increases the predicted singlet-triplet gap in favor of the triplet. Other aryl cationic species substituted with strong pi electron-donating groups in the meta positions are predicted to have low-energy or ground-state triplet states. Systems analogous to the naphthaquinodimethane diradicals are also reported.     

Titrimetric analysis of total mercury ions including mercury(I) ions

A systematic analytical method is proposed and applied to directly determine the total concentration of Hg(II) and Hg(I) ions in water. Experimental results demonstrate that this method provides a low detection limit of 0.05 mM and small relative error within 1.5% in an ion concentration range of 0.2–50 mM. The technique is especially applicable for sample solutions that the traditional titration method like Volhard and EDTA complexation titrimetry could not analyze directly. This method could be employed to analyze solutions in any ratio of Hg(II) and Hg(I) ions including pure Hg(II) or pure Hg(I) ions, exhibiting several advantages, such as simple operation, good reproducibility, and low cost. Correspondence: Xin-Gui Li, Key Laboratory of Advanced Civil Engineering Materials, Institute of Materials Chemistry, College of Materials Science and Engineering, Tongji University, 1239 Siping Road, Shanghai 200092, China.     

Titrimetric analysis of total mercury ions including mercury(I) ions

A systematic analytical method is proposed and applied to directly determine the total concentration of Hg(II) and Hg(I) ions in water. Experimental results demonstrate that this method provides a low detection limit of 0.05 mM and small relative error within 1.5% in an ion concentration range of 0.2–50 mM. The technique is especially applicable for sample solutions that the traditional titration method like Volhard and EDTA complexation titrimetry could not analyze directly. This method could be employed to analyze solutions in any ratio of Hg(II) and Hg(I) ions including pure Hg(II) or pure Hg(I) ions, exhibiting several advantages, such as simple operation, good reproducibility, and low cost.     

Theoretical notions of aromaticity and antiaromaticity: phenalenyl ions versus fluorenyl ions

The dications 6, 7, and 8 and dianions 9, 10, and 11 of the bistricyclic aromatic enes bifluorenylidene (1), 1,1'-biphenalenylidene (2), and 9-(9H-fluoren-9-ylidene)-1H-phenalene (4), as well as monocations 12a and 13a and monoanions 14a and 15a of phenalene (3) and fluorene (5), were subjected to a systematic DFT and ab initio study. B3LYP and MP2 methods were employed to estimate the relative aromaticity/antiaromaticity of these ions, using energetic, magnetic, and structural criteria. The couplings of monoions 12a-15a to give the respective diions 6-11 result in a similar destabilization in both the fluorene and phenalene series. The interactions between the C13H8 units in diions 6-11 are weak and are not expected to result in a significant loss of aromaticity/gain of antiaromaticity, as compared with the respective monoions. The antiaromaticity of bifluorenylidene dication (6), relative to that of two fluorenyl cations (12a), is only slightly enhanced as compared with the aromaticity of biphenalenylidene dication ((E)-7)) relative to that of two phenalenyl cations (13a). In particular, the homodesmotic reaction 6 + 2.13a = (E)-7 + 2.12a is only slightly exothermic, DeltaE(Tot) = -6.0 kJ/mol. The energetic effect of the analogous reaction involving anions 9 + 2.15a = (E)-10 + 2.14a is even smaller, DeltaE(Tot) = -3.4 kJ/mol. Bifluorenylidene dianion (9) and 1,1'-biphenalenylidene dianion ((E)-10) are aromatic, but the employed criteria disagree about their relative aromaticity. The electronic and structural properties of heteromerous dication 8 and dianion 11 lie between those of the homomerous diions. Thus, dications 6-8 and dianions 9-11 form a continuum of aromaticity/antiaromaticity.     

Charge-tranfer reactions of oxygen ions and titanium ions at titanium oxide films

The partial current densities for the transfer of titanium(IV) and oxygen ions, and of electrons at the interface between the electrolyte and the titanium(IV) oxide layer on titanium were measured as functions of total current density and pH value. It is shown theoretically, how conclusions regarding the mechanisms of the transfer reactions of both ions can be drawn from various relations between the ionic partial current densities and their dependence on solution composition, even if the electric potential difference at the oxide interface cannot be measured. Mechanisms for the transfer reactions of titanium(IV) and oxygen ions are derived from the experiments.     

Chemistry of thiophenium ions

Data are reviewed for the generation and reaction of 2H-thiophenium ions which are cationic thiophene -complexes.Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 6, pp. 733–743, June, 1992.     

Stability of molecular ions

Physical Institute, Leningrad State University. Translated from Zhurnal Strukturnoi Khimii, Vol. 32, No. 5, pp. 133–134, September–October, 1991.     

Dynamics of lithium ions in bismuthate glasses: influence of strontium ions

The influence of strontium ions on the relaxation dynamics of lithium ions in bismuthate glasses has been investigated in the frequency range of 10 Hz to 2 MHz. We have observed that the conductivity increases and the activation energy decreases with the increase of SrO content in the glass compositions with fixed Li2O content. We have also observed that the conductivity increases and the activation energy decreases when Sr2+ ions are replaced by Li+ ions, keeping the glass former content fixed. We have shown that the estimated mobile ion concentration is almost independent of temperature and SrO content in the compositions. We have further shown that a fraction of total lithium ions are mobile for all glass compositions. The results have been interpreted on the basis of the modification of the bismuthate network by the addition of SrO, which enhances the mobility of Li ions, without altering the mobile Li+ ion concentration. We have also shown that the conductivity relaxation in these glasses is independent of temperature and composition, and the nonexponential parameter is less than that for the lithium bismuthate glasses without SrO.     

Alkali-hydride water cluster ions

Using a CO₂ laser we have desorbed LiOH and NaOH from a solid target into an expanding inert gas jet pulse. Subsequently the beam was ionized by photons from a UV laser. Surprisingly, we observed in mass spectra metal water clusters and metal-hydride water clusters. For the metals M=Li, Na we find that the [M(H₂O)_n]⁺ peaks are dominant for small clusters, while for large clusters (n>20) the [MH(H₂O)_n]⁺ peaks are dominant. This indicates that the clathrate (H₂O)₂₀ may play an important role in the formation of metallo-water clusters.