DFT and IR spectroscopic analysis of p-tert-butylthiacalix[4]arene

Vibrational analysis of p-tert-butylthiacalix[4]arene based on an experimental mid and far IR spectra is described here. Density functional calculations of a most stable cone conformer related to crystalline solid FT-IR spectra in the temperature range up to 180 degrees C as well spectra of dilute solution have been used to obtain a better understanding of conformational state and a hydrogen bonding of p-tert-butylthiacalix[4]arene. Complete assignments were made for experimental FT-IR spectra of the cone conformer. Heating (up to 180 degrees C) of crystalline p-tert-butylthiacalix[4]arene did not change both conformational and cooperative H-bonding state of its molecules. A temperature spectral effect seems to be due to some relaxation of crystal packing mostly viewed on the OH bands.     

Synthetic modulator of chymotrypsin activity based on p-tert-butylthiacalix[4]arene

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Aminoanthraquinone derivatives based on p-tert-butylthiacalix[4]arene. Synthesis and fluorescence properties

A convenient procedure has been developed for the synthesis of p-tert-butylthiacalix[4]arene derivatives modified at the lower rim with anthraquinone fragments linked through acetamide spacers. The products showed moderate fluorescence in the region λ 520–620 nm.     

Synthesis of p-tert-butylthiacalix[4]arene with spatially separated phosphoryl and amino groups

Russian Journal of General Chemistry - The reactions of p-tert-butylthiacalix[4]arenes containing phthalimide fragments with diethyl-[(p-toluenesulfonyl)oxymethyl)]phosphonate were used to...     

A unique Mn2Gd2 tetranuclear compound of p-tert-butylthiacalix[4]arene

A calixarene complex with tetragonal Mn(II 2Gd(III)2 tetranuclear units was synthesized in solvothermal conditions, where the addition of a small amount of water was crucial for the formation of the target compound. In the structure, two tail-to-tail p-tert-butylthiacalixarenes are located in a C-shaped mode with a dihedral angle of 14.29 degrees but not in the conventional antiparallel arrangement and form a sandwich-like subunit with an in-between Mn2Gd2 unit. Both calixarenes assume similar cone shapes of C2v symmetry but are pinched to different extents. The extended structure is constructed by supramolecular stacking of the sandwich-like units with the interstices filled by the solvent. The magnetic property of the title compound has been examined.     

Synthesis of hydrazones containing sterically hindered phenol groups and tetrathiacalix[4]arene fragment

1,3-Alternate and cone stereoisomers of tetrathiacalix[4]arene and 4-tert-butyltetrathiacalix[4]arene functionalized by carbohydrazide groups reacted with 3,5-di-tert-butyl-4-hydroxybenzaldehyde to give the corresponding hydrazones having sterically hindered phenol fragments.     

Modelling conformations and IR spectra of p-tert-butylthiacalix[4]arene tetraester using DFT method

The infrared spectra of the cone, partial cone and 1,3-alternate conformers of p-tert-butyltetrakis(ethoxycarbonyl)methoxytetrathiacalix[4]arene (TEMT) have been recorded. The structural optimization and normal mode analysis were performed for this molecule on the basis of the density functional theory. These calculations gave the frequencies of vibrations and infrared intensities for the cone, partial cone (paco) and 1,3-alternate (1,3-alt) conformers. The energy difference between the paco and 1,3-alt conformers is 3.1 kcal/mol. The cone conformer is likely to be less stable compared to the paco and 1,3-alt conformers. The calculated in gas phase dipole moments 5.65, 3.33, and 0.02 D for the cone, paco and 1,3-alt conformers of the TEMT are in good accordance with theoretical values for the thiacalix[4]arene. Complete assignments were made for the experimental IR spectra of all conformers. The softness of sulphur atoms to nucleophilic and electrophilic attack is higher than softness of oxygen atoms of ester groups in the lower rim. The bands characteristic for each conformation were defined. IR spectroscopy combined with DFT computation provides unique detailed information about the structure of the technologically relevant materials, which could not be obtained before with any other technique.     

Unique inclusion properties of crystalline powder p-tert-butylthiacalix[4]arene toward alcohols and carboxylic acids

Powdery crystals of p-tert-butylthiacalix[4]arene (2) selectively include EtOH from 1:1 mixtures of MeOH-EtOH and EtOH-PrOH, and EtCO(2)H from HCO(2)H-EtCO(2)H. On the other hand, no acid is included from HCO(2)H-MeCO(2)H, even though MeCO(2)H is included from the neat acid. The origins of these phenomena are discussed based on X-ray analysis of inclusion crystals prepared separately by crystallization.     

Study of the structure of <Emphasis Type="Italic">p-tert</Emphasis>-butyl-substituted thiacalix[4]arenes containing amide fragment by one- and two-dimensional NMR spectroscopy

Structures of 5,11,17,23-tetra-tert-butyl-25,26,27-trihydroxy-28- and 5,11,17,23-tetra-tert-butyl-25,26-dihydroxy-27,28-[N-(4′-nitrophenyl)aminocarbonylmethoxy]thiacalix[4]arenes (I, II) (solutions in CDCl₃) were studied by ¹H and ¹³C 1D and 2D (NOESY) NMR spectroscopy combined with the use of computational simulation (semiempirical quantum-chemical calculations, method PM3). Compound I was found to exists in the cone conformation, and the bulky substituent OCH₂C(O)NHPhNO₂, in contrast to the crystalline state, was located in the exo position to the macrocycle cavity; for compound II the cone conformation was observed, where the substituents are turned to the inside of the cavity of the macrocycle (endo position).     

Picolyl Armed C-1,2 Alternate Tetrahomodioxacalix[4]arene Tetraamides

A series of benzyl, 2-picolyl, 3-picolyl armed tetrahomodioxacalix[4]arene tetraamideswith four p-phenyl groups on the upper rim were synthesized. They were found to be in the C-1,2-alternate conformation by ¹H, ¹³C NMR, andX-ray crystal structure.The nitrogen atom of the 2-picolyl group played an important role in the metal ion complexation.     

Synthesis of naphtho[1,2-d]imidazoles containing an adamantyl fragment

Russian Journal of Organic Chemistry -     

Synthesis and structural characterization of a binuclear zirconium complex of tetraanionic p-tert-butylthiacalix[4]arene bridged by methanol

A zirconium complex with the p-tert-butylthiacalix[4]arene anion was synthesized and its crystal structure was determined by single-crystal X-ray analysis. The complex [Zr(μ₂-CH₃OH)(p-tert-butylthiacalix[4]arene)]₂·9H₂O (1) belongs to the orthorhombic system, space group Pnnm, with a?=?20.436(16), b?=?12.160(8), c?=?20.305(12)?Å, V?=?6774(7)?ų and Z?=?2. In Complex 1 zirconium coordinates to four phenolic anions of the deprotonated p-tert-butylthiacalix[4]arene and is bridged by two methanol molecules; the p-tert-butylthiacalix[4]arene adopts a cone conformation.     

Polyfunctional branched nitrogen-containing p-tert-butylthiacalix[4]arene derivatives as efficient agents for packaging calf thymus DNA

Russian Chemical Bulletin - Polyfunctional p-tert-butylthiacalix[4]arenes tetrasubstituted at the lower rim with nitrogen-containing fragments in the cone, partial cone, and 1,3-alternate...     

Thiocalix[4] arenes. I. Synthesis and structure of ethylthiocalix[4]arene methyl ether and the related structure of bromocalix[4]arene methyl ether

Bromocalix[4]arene methyl ether serves as a precursor in the synthesis of the title thiocalixarene via the reagent CuSEt. Ethylthiocalix[4]arene methyl ether crystallizes in the monoclinic space groupP2₁/c witha = 20.577(9),b, = 10.722(5),c = 20.315(9) Å, = 120.46(4)°, andD _c = 1.24 g cm^–3 forZ = 4. Refinement based on 1441 observed reflections led toR = 0.080. The configuration of the calixarene lies between the partial cone and the 1,3-altemate conformations. Bromocalix[4]arene methyl ether crystallizes in the triclinic space groupPI witha = 12.283(7),b = 17.658(9),c = 18.118(6) Å, = 90.25(6), = 105.95(4), = 105.11(6)°, andD _c = 1.68 g cm^–3 forZ = 4. Refinement based on 3028 observed reflections led toR = 0.083. The unit cell also contains four CHCl₃ molecules which exist pairwise enclathrated by six calixarenes. The partial cone conformation of the bromocalixarene is identical to that of ethylthiocalix[4]arene methyl ether.     

Microwave-assisted synthesis of resorcin[4]arene and pyrogallol[4]arene macrocycles

A series of resorcin[4]arene and pyrogallol[4]arene macrocycles have been synthesized efficiently within 5 min, affording crystalline products suitable for single crystal X-ray diffraction, utilising microwave irradiation in a ‘one-pot’ reaction whilst controlling the selective formation of the rccc cone stereoisomer.     

The structure of water in p-sulfonatocalix[4]arene

Tetrasodium p-sulfonatocalix[4]arene exists as a hydrate with approximately 14 water molecules and has three polymorphic modifications, all of which contain a water molecule in the molecular cavity that is engaged in OH···π interactions. Single-crystal neutron structures are reported for two of these three forms and reveal a "compressed" water molecule with short OH bonds. Partial atomic charges and hardness analysis (PACHA) calculations based on the neutron coordinates give an OH···π interaction energy of 6.9-7.5 kJ mol(-1). The PACHA analysis also reveals the dominance of the charge-assisted hydrogen bonds from the Na(+)-coordinated water molecules. The instability of the crystal towards dehydration can be traced to an uncoordinated lattice water site. The remarkable calixarene-Na(+)-hydrate motif is conserved almost unchanged across all three polymorphs. A single-crystal neutron structure is also reported for pentasodium p-sulfonatocalix[4]arene·12H(2)O, which exhibits an intracavity water molecule that is engaged in both OH···π and OH···O hydrogen bonding. The shorter covalent bond to the hydrogen atom that forms the interaction with the aromatic ring is again apparent.