Binding N2, N2H2, N2H4, and NH3 to transition-metal sulfur sites: modeling potential intermediates of biological N2 fixation

In the quest for low-molecular-weight metal sulfur complexes that bind nitrogenase-relevant small molecules and can serve as model complexes for nitrogenase, compounds with the [Ru(PiPr(3))('N(2)Me(2)S(2)')] fragment were found ('N(2)Me(2)S(2)'(2-)=1,2-ethanediamine-N,N'-dimethyl-N,N'-bis(2-benzenethiolate)(2-)). This fragment enabled the synthesis of a first series of chiral metal sulfur complexes, [Ru(L)(PiPr(3))('N(2)Me(2)S(2)')] with L=N(2), N(2)H(2), N(2)H(4), and NH(3), that meet the biological constraint of forming under mild conditions. The reaction of [Ru(NCCH(3))(PiPr(3))('N(2)Me(2)S(2)')] (1) with NH(3) gave the ammonia complex [Ru(NH(3))(PiPr(3))('N(2)Me(2)S(2)')] (4), which readily exchanged NH(3) for N(2) to yield the mononuclear dinitrogen complex [Ru(N(2))(PiPr(3))('N(2)Me(2)S(2)')] (2) in almost quantitative yield. Complex 2, obtained by this new efficient synthesis, was the starting material for the synthesis of dinuclear (R,R)- and (S,S)-[micro-N(2)[Ru(PiPr(3))('N(2)Me(2)S(2)')](2)] ((R,R)-/(S,S)-3). (Both 2 and 3 have been reported previously.) The as-yet inexplicable behavior of complex 3 to form also the R,S isomer in solution has been revealed by DFT calculations and (2)D NMR spectroscopy studies. The reaction of 1 or 2 with anhydrous hydrazine yielded the hydrazine complex [Ru(N(2)H(4))(PiPr(3))('N(2)Me(2)S(2)')] (6), which is a highly reactive intermediate. Disproportionation of 6 resulted in the formation of mononuclear diazene complexes, the ammonia complex 4, and finally the dinuclear diazene complex [micro-N(2)H(2)[Ru(PiPr(3))('N(2)Me(2)S(2)')](2)] (5). Dinuclear complex 5 could also be obtained directly in an independent synthesis from 1 and N(2)H(2), which was generated in situ by acidolysis of K(2)N(2)(CO(2))(2). Treatment of 6 with CH(2)Cl(2), however, formed a chloromethylated diazene species [[Ru(PiPr(3))('N(2)Me(2)S(2)')]-micro-N(2)H(2)[Ru(Cl)('N(2)Me(2)S(2)CH(2)Cl')]] (9) ('N(2)Me(2)S(2)CH(2)Cl'(2-) =1,2-ethanediamine-N,N'-dimethyl-N-(2-benzenethiolate)(1-)-N'-(2-benzenechloromethylthioether)(1-)]. The molecular structures of 4, 5, and 9 were determined by X-ray crystal structure analysis, and the labile N(2)H(4) complex 6 was characterized by NMR spectroscopy.     

Reactivity of positively charged cobalt cluster ions with CH4, N2, H2, C2H4, and C2H2

Reactivity of positively charged cobalt cluster ions (Co _n ⁺ ,n=2?22), produce by laser vaporization, with various gas samples (CH₄, N₂, H₂, C₂H₄, and C₂H₂) were systematically investigated by using a fast-flow reactor. The reactivity of Co _n ⁺ with the various gas samples is qualitatively consistent with the adsorption rate of the gas to cobalt metal surfaces. Co _n ⁺ highly reacts with C₂H₂ as characterized by the adsorption rate to metal surfaces, and it indicates no size dependence. In contrast, the reactions of Co _n ⁺ with the other gas samples indicate a similar cluster size dependence; atn=4, 5, and 10?15, Co _n ⁺ highly reacts. The difference can be explained by the amount of the activation energy for chemisorption reaction. Compared with neutral cobalt clusters, the size dependence is almost similar except for Co ₄ ⁺ and Co ₅ ⁺ . The reactivity enhancement of Co ₄ ⁺ and Co ₅ ⁺ indicates that the cobalt cluster ions are presumed to have an active site for chemisorption atn=4 and 5, induced by the influence of positive charge.     

A population analysis of the bonding in N2O4, B2Cl4, B2F4, C2H4 and C3H4

Population matrices have been calculated from molecular orbital wave functions of N₂O₄, B₂Cl₄, and B₂F₄ in order to understand further the bonding in these molecules which are isoelectronic in valence electrons but different in structure. C₂H₄ and C₃H₄ have been included in this study as check cases.

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Zusammenfassung Ausgehend von Molekülorbitalen werden Besetzungsmatrizen für N₂O₄, B₂Cl₄ und B₂F₄ berechnet, um die Bindung in diesen Molekülen, die in den Valenzelektronen isoelektronisch sind, aber unterschiedliche Strukturen aufweisen, besser zu verstehen. C₂H₄ und C₃H₄ sind in dieser Untersuchung als Prüffälle eingeschlossen.

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Résumé Des matrices d'occupation ont été calculées à partir des orbitales moléculaires de N₂O₄, B₂Cl₄ et B₂F₄, afin de comprendre plus profondément la liaison dans ces molécules, qui sont isoélectroniques par leurs électrons de valence, mais qui n'ont pas la même structure. C₂H₄ et C₃H₄ sont considérés dans cette étude à titre de vérification.

     

Gas-chromatographische Simultanbestimmung von O2, N2, CO,CO2, N2O,SO2, CH4, C2H4 und C2H6 im ppm-Bereich. I. Mitteilung

Zusammenfassung Die vorliegende Arbeit beschreibt ein neues Verfahren zur gas-chromatographischen Simultananalyse von N₂, O₂, CO, CO₂, N₂O, SO₂, CH₄, C₂H₄ und C₂H₆ im Konzentrations-bereich von 10% bis 10 ppm ohne Voranreicherung. Die temperaturprogrammierte Trennung der Einzelkomponenten erfolgt nach Vorsäulensplitting auf zwei parallel geschalteten Säulen. Zur Emittlung der Retentionszeiten und der Peakflächen werden zwei voneinander unabhängige Ultraschalldetektoren verwendet, deren Analogsignale nach Digitalisierung in einem Mikrocomputer verarbeitet werden. Instrumentierung und chromatographische Einzelheiten werden beschrieben und diskutiert.

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Simultaneous gas chromatographic determination of N₂, O₂, CO, CO₂, N₂O, SO₂, CH₄, C₂H₄ and C₂H₆ at the ppm-level. Part I

Summary A new procedure for the simultaneous determination of N₂, O₂, CO, CO₂, N₂O, SO₂, CH₄, C₂H₄ and C₂H₆ by gas chromatography is described. Concentrations from 10% down to 10 ppm can be determined without preconcentration. After a pre-column splitting the individual compounds of the sample are separated by a uniform temperature program on two different columns in parallel. Detection of the effluents is achieved by two individual ultrasonic detectors, the data from which are processed in a micro-computer. Instrumentation and gas chromatographic details are described and discussed.

     

ENDOR/HYSCORE studies of the common intermediate trapped during nitrogenase reduction of N2H2, CH3N2H, and N2H4 support an alternating reaction pathway for N2 reduction

Enzymatic N(2) reduction proceeds along a reaction pathway composed of a sequence of intermediate states generated as a dinitrogen bound to the active-site iron-molybdenum cofactor (FeMo-co) of the nitrogenase MoFe protein undergoes six steps of hydrogenation (e(-)/H(+) delivery). There are two competing proposals for the reaction pathway, and they invoke different intermediates. In the 'Distal' (D) pathway, a single N of N(2) is hydrogenated in three steps until the first NH(3) is liberated, and then the remaining nitrido-N is hydrogenated three more times to yield the second NH(3). In the 'Alternating' (A) pathway, the two N's instead are hydrogenated alternately, with a hydrazine-bound intermediate formed after four steps of hydrogenation and the first NH(3) liberated only during the fifth step. A recent combination of X/Q-band EPR and (15)N, (1,2)H ENDOR measurements suggested that states trapped during turnover of the α-70(Ala)/α-195(Gln) MoFe protein with diazene or hydrazine as substrate correspond to a common intermediate (here denoted I) in which FeMo-co binds a substrate-derived [N(x)H(y)] moiety, and measurements reported here show that turnover with methyldiazene generates the same intermediate. In the present report we describe X/Q-band EPR and (14/15)N, (1,2)H ENDOR/HYSCORE/ESEEM measurements that characterize the N-atom(s) and proton(s) associated with this moiety. The experiments establish that turnover with N(2)H(2), CH(3)N(2)H, and N(2)H(4) in fact generates a common intermediate, I, and show that the N-N bond of substrate has been cleaved in I. Analysis of this finding leads us to conclude that nitrogenase reduces N(2)H(2), CH(3)N(2)H, and N(2)H(4) via a common A reaction pathway, and that the same is true for N(2) itself, with Fe ion(s) providing the site of reaction.     

Coordination of a complete series of N2 reduction intermediates (N2H2, N2H4, and NH3) to an iron phosphine scaffold

The series of dinitrogen reduction intermediates (N(2)H(2), N(2)H(4), and NH(3)) coordinated to the Fe(DMeOPrPE)(2)H(+)(DMeOPrPE = 1,2-[bis(dimethoxypropyl)phosphino]ethane) scaffold has been synthesized or generated. The synthesis of trans-[Fe(DMeOPrPE)(2)(NH(3))H][BPh(4)] and generation of trans-[Fe(DMeOPrPE)(2)(N(2)H(4))H][BPh(4)] were achieved by substitu tion of the dinitrogen ligand on trans-[Fe(DMeOPrPE)(2)(N(2))H][BPh(4)]. The trans-[Fe(DMeOPrPE)(2)(N(2)H(2))H](+) complex and its deprotonated conjugate base, trans-Fe(DMeOPrPE)(2)(N(2)H)H, were observed by (31)P and (1)H NMR from decomposition of trans-[Fe(DMeOPrPE)(2)(N(2)H(4))H](+) in the presence of excess hydrazine. Attempts to chemically oxidize trans-[Fe(DMeOPrPE)(2)(N(2)H(4))H](+) to trans-[Fe(DMeOPrPE)(2)(N(2)H(2))H][BPh(4)] with a variety of oxidizing agents yielded only decomposition products consistent with the intermediate formation of trans-[Fe(DMeOPrPE)(2)(N(2)H(2))H](+) prior to decomposition.     

A five-coordinate phosphino/acetate iron(II) scaffold that binds N2, N2H2, N2H4, and NH3 in the sixth site

A family of iron(II) complexes that coordinate dinitrogen, diazene, hydrazine, and ammonia are presented. This series of complexes is unusual in that the complexes within it feature a common auxiliary ligand set and differ only by virtue of the nitrogenous N(x)H(y) ligand that occupies the sixth binding site. The ability of an iron center to bind N(2), N(2)H(2), N(2)H(4), and NH(3) is important to establish in the context of evaluating catalytic N(2) reduction schemes that invoke these nitrogenous species. Such a scenario has been proposed as an iron-mediated, alternating reduction scheme within the cofactor of nitrogenase enzymes.     

Primary branching ratios for the low-temperature reaction of state-prepared N2+ with CH4, C2H2, and C2H4

Product branching ratios (BRs) are reported for ion-molecule reactions of state-prepared nitrogen cation (N(2)(+)) with methane (CH(4)), acetylene (C(2)H(2)). and ethylene (C(2)H(4)) at low temperature using a modified ion imaging apparatus. These reactions are performed in a supersonic nozzle expansion characterized by a rotational temperature of 40 ± 5K. For the N(2)(+) + CH(4) reaction, a BR of 0.83:0.17 is obtained for the dissociative charge-transfer (CT) reaction that gives rise to the formation of CH(3)(+) and CH(2)(+) product ions, respectively. The N(2)(+) + C(2)H(2) ion-molecule reaction proceeds through a nondissociative CT process that results in the sole formation of C(2)H(2)(+) product ions. The reaction of N(2)(+) with C(2)H(4) leads to the formation of C(2)H(3)(+) and C(2)H(2)(+) product ions with a BR of 0.74:0.26, respectively. The reported BR for the N(2)(+) + C(2)H(4) reaction is supportive of a nonresonant dissociative CT mechanism similar to the one that accompanies the N(2)(+) + CH(4) reaction. No dependence of the branching ratios on N(2)(+) rotational level was observed. In addition to providing direct insight into the dynamics of the state-prepared N(2)(+) ion-molecule reactions with the target neutral hydrocarbon molecules, the reported low-temperature BRs are also important for accurate modeling of the nitrogen-dominated upper atmosphere of Saturn's moon, Titan.