Syntheses and conformational structures of functionalized tetraoxacalix[2]arene[2]triazines

The syntheses and conformational structures of various functionalized tetraoxacalix[2]arene[2]triazines were studied. Applying the fragment coupling approach and the post-macrocyclization chemical manipulations, a number of tetraoxacalix[2]arene[2]triazines that contain, on the lower rim, one or two aldehyde, ester, carboxylic acid, hydroxymethyl, and aminomethyl functional groups were prepared in moderate to high chemical yields from cheap and commercially available materials. On the basis of X-ray crystallography and NMR spectroscopy, all tetraoxacalix[2]arene[2]triazines containing electron-withdrawing group(s) adopted 1,3-alternate conformation both in solution and in the solid state, while tetraoxacalix[2]arene[2]triazines bearing hydroxymethyl and aminomethyl substituent(s) existed as pinched or distorted partial cone conformers due to the formation of intramolecular hydrogen bond between hydroxyl or amino group and triazine ring.     

Formation and conformational conversion of flattened partial cone oxygen bridged calix[2]arene[2]triazines

A stepwise fragment coupling reaction starting with substituted dichlorotriazine and resorcinol derivatives gave rise to thermodynamically favored 1,3-alternate tetraoxacalix[2]arene[2]triazines and kinetically controlled flattened partial cone tetraoxacalix[2]arene[2]triazines. The flattened partial cone conformer, which was stable due to the steric effect, converted into the 1,3-alternate conformer via ether bond cleavage upon treatment with an inorganic base.     

Quantitative conformational study of redox-active [2]rotaxanes, part 1: Methodology and application to a model [2]rotaxane

This paper reports a novel methodology for the conformational analysis of [2]rotaxanes. It combines NMR spectroscopic (COSY, NOESY and the recently reported paramagnetic line-broadening and suppression technique) and electrochemical techniques to enable a quantitative analysis of the co-conformations of interlocked molecules and the conformations of their components. This methodology was used to study a model [2]rotaxane in solution. This [2]rotaxane consists of an axle that incorporates an electron-poor, doubly positively charged viologen that threads an electron-rich crown ether. It has been shown that the axle of the [2]rotaxane in its dicationic state adopts a folded conformation in solution and the crown ether is localised at the viologen moiety. Following a one-electron reduction of viologen, the paramagnetic radical cation of the [2]rotaxane retains its folded conformation in solution. The data also demonstrate that in the radical cation the crown ether remains localised at the viologen, despite its reduced affinity for the singly reduced viologen. The combined quantitative NMR spectroscopic and electrochemical characterisation of the electromechanical function of the model [2]rotaxane in solution provides an important reference point for the study of switching in structurally related bistable [2]rotaxanes, which is the subject of the second part of this work.     

Metal-metal bond formation between [n]metallocenophanes: synthesis and characterisation of a dicarba[2]ruthenocenophanium dimer

Feeling the strain: The first example of metal-metal bonding between strained [n]metallocenophanes is reported. A dicarba[2]ruthenocenophanium dimer has been synthesised through the oxidation of a dicarba[2]ruthenocenophane (see figure). The structural and electrochemical characterisation of the dimer is also discussed.     

High-nuclearity sulfide-rich molybdenum[bond]iron[bond]sulfur clusters: reevaluation and extension

High-nuclearity Mo[bond]Fe[bond]S clusters are of interest as potential synthetic precursors to the MoFe(7)S(9) cofactor cluster of nitrogenase. In this context, the synthesis and properties of previously reported but sparsely described trinuclear [(edt)(2)M(2)FeS(6)](3-) (M = Mo (2), W (3)) and hexanuclear [(edt)(2)Mo(2)Fe(4)S(9)](4-) (4, edt = ethane-1,2-dithiolate; Zhang, Z.; et al. Kexue Tongbao 1987, 32, 1405) have been reexamined and extended. More accurate structures of 2-4 that confirm earlier findings have been determined. Detailed preparations (not previously available) are given for 2 and 3, whose structures exhibit the C(2) arrangement [[(edt)M(S)(mu(2)-S)(2)](2)Fe(III)](3-) with square pyramidal Mo(V) and tetrahedral Fe(III). Oxidation states follow from (57)Fe M?ssbauer parameters and an S = (3)/(2) ground state from the EPR spectrum. The assembly system 2/3FeCl(3)/3Li(2)S/nNaSEt in methanol/acetonitrile (n = 4) affords (R(4)N)(4)[4] (R = Et, Bu; 70-80%). The structure of 4 contains the [Mo(2)Fe(4)(mu(2)-S)(6)(mu(3)-S)(2)(mu(4)-S)](0) core, with the same bridging pattern as the [Fe(6)S(9)](2-) core of [Fe(6)S(9)(SR)(2)](4-) (1), in overall C(2v) symmetry. Cluster 4 supports a reversible three-member electron transfer series 4-/3-/2- with E(1/2) = -0.76 and -0.30 V in Me(2)SO. Oxidation of (Et(4)N)(4)[4] in DMF with 1 equiv of tropylium ion gives [(edt)(2)Mo(2)Fe(4)S(9)](3-) (5) isolated as (Et(4)N)(3)[5].2DMF (75%). Alternatively, the assembly system (n = 3) gives the oxidized cluster directly as (Bu(4)N)(3)[5] (53%). Treatment of 5 with 1 equiv of [Cp(2)Fe](1+) in DMF did not result in one-electron oxidation but instead produced heptanuclear [(edt)(2)Mo(2)Fe(5)S(11)](3-) (6), isolated as the Bu(4)N(+)salt (38%). Cluster 6 features the previously unknown core Mo(2)Fe(5)(mu(2)-S)(7)(mu(3)-S)(4) in molecular C(2) symmetry. In 4-6, the (edt)MoS(3) sites are distorted trigonal bipramidal and the FeS(4) sites are distorted tetrahedral with all sulfide ligands bridging. M?ssbauer spectroscopic data for 2 and 4-6 are reported; (mean) iron oxidation states increase in the order 4 < 5 approximately 1 < 6 approximately 2. Redox and spectroscopic data attributed earlier to clusters 2 and 4 are largely in disagreement with those determined in this work. The only iron and molybdenum[bond]iron clusters with the same sulfide content as the iron[bond]molybdenum cofactor of nitrogenase are [Fe(6)S(9)(SR)(2)](4-) and [(edt)(2)Mo(2)Fe(4)S(9)](3-)(,4-).     

Path selection for conformational interconversions in [2]catenanes

[strucure: see text]The conformational interconversions of several [2]catenanes containing a dibenzo-34-crown-10 ether (BPP34C10) interlocked with rings containing two 4,4'-dipyridyls tethered by different aryl spacers have been studied. Blocking groups on the tethers enabled the two pathways for circumrotation of the BPP34C10 to be open or blocked. The activation barrier for migration along the open tethers varied from 11 to 13 kcal/mol. This study demonstrates an ability to select the pathway for conformational interconversions in [2]catenanes.     

Configuration and conformation of 3,5-diphenyl-2-thiabicyclo[4.4.0]decane

The PMR spectra of 3,5-diphenyl-2-thiabicyclo[4.4.0]decane and its 4,6-dideutero derivative and S-oxide in the presence of Eu(dpm)₃ were studied. It was established that 3,5-diphenyl-2-thiabicyclo[4.4.0]decane has a cis,cis,cis configuration. The extremal spin-spin coupling constants (SSCC) constitute evidence for conformational rigidity of the investigated condensed system, which exists in the form of a puckered chair. The formation of the same cis,cis,cis isomer of 3,5-diphenyl-2-thiabicyclo[4.4.O]decane in the case of catalytic hydrogenation, disproportionation with trifluoroacetic acid, and ionic hydrogenation constitutes evidence for stereospecificity of the processes involving the reduction of the double bonds in 2,4-diphenyl-5,6-tetramethylene-6H-thiopyran.Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 10, pp. 1347–1350, October, 1981.     

Propellanes-LXXV A [2+2]photocycloaddition of an N = n bond to a C=c bond

Irradiation of an azo-propellane derivative in which an olefinic bond is proximate to the azo group forms a cage compound containing a 1,2-diazacyclobutane ring.     

Ring[bond]chain tautomerism of 2-Aryl-substituted cis- and trans-decahydroquinazolines

In CDCl(3) at 300 K, 2-aryl-substituted cis- and trans-3-isopropyldecahydroquinazolines and trans-3-phenyldecahydroquinazolines proved to be three-component (r(1)[bond]o[bond]r(2)) ring[bond]chain tautomeric mixtures, whereas only ring-closed tautomers could be detected for the 3-methyl-substituted analogues. The proportions of the ring-chain tautomeric forms at equilibrium were strongly influenced by the N-substitutents and the cis-trans ring junction and could be described by the equation log K(X) = rho sigma(+) + log K(X=H). These are the first examples among 2-aryl-1,3-N,N-heterocycles of a three-component ring-chain tautomeric equilibrium characterized by a Hammett-type equation. The stabilities of the ring-closed forms of cis- and trans-2-aryldecahydroquinazolines and the corresponding 3,1-benzoxazines were found to increase in the following sequence of the heteroatom at position 3: NPh < N-i-Pr < O < NMe.     

Theoretical study and X-ray determination of bianthronyl [corrected] : long C-C bond length and preferred gauche conformation

Five X-ray crystallographic structures of bianthronyl (1, 2b-5b) revealed the presence of long central C(sp3)-C(sp3) bonds (> or =1.60 A) and mostly gauche conformation. DFT calculations were carried out to study the structural features of bianthronyl and related model molecules [corrected]. Our B3LYP/6-31G gas-phase calculation results suggest that steric effect plays a role in causing the long C-C sigma bond length (>1.60 A), nonplanarity of the anthracenone moiety (>20 degrees ), and preferred gauche conformation. However, when the gauche preference is weak, environmental effects such as solvation and packing forces can reverse it. As the degree of nonplanarity of the anthracenone moiety is consistently larger in the anti conformation than in the gauche and the ease of achieving nonplanarity is determined by flexibility of the central six-membered rings directly connected to the C(sp3)-C(sp3) bond, one way to control the structure and anti-gauche energy difference of closely related compounds is by changing the clamping group (Z) in the central six-membered ring.     

Quantitative conformational study of redox-active [2]rotaxanes, part 2: Switching in flexible and rigid bistable [2]rotaxanes

Translational movement of the macrocycle in two structurally similar bistable [2]rotaxanes, which is induced by a four-step electrochemical process in solution, has been investigated by using a methodology developed in the preceding article (Chem. Eur. J. 2008, 14, 1107-1116). Both [2]rotaxanes contain a crown ether that can be accommodated by either of two interconnected viologen recognition sites. These sites are substantially different in terms of their affinity towards the crown ether and they possess considerably different electrochemical reduction potentials. The two [2]rotaxanes differ in the length and the rigidity of a bridge that links these sites. A combination of molecular mechanics modelling and NOE spectroscopy data provides information about the conformations of both [2]rotaxanes in the parent oxidation state when the crown ether exclusively populates the strong recognition site. To determine the population of the recognition sites at subsequent stages of reduction, a paramagnetic NMR technique and cyclic voltammetry were used. The key finding is that the flexibility of the connecting bridge element between the recognition sites interferes with shuttling of the crown ether in [2]rotaxanes. It can be demonstrated that the more flexible trimethylene bridge is folded, thus limiting the propensity of the crown ether to shuttle. Consequently, the crown ether populates the original site even in the second reduced state of the flexible [2]rotaxane. On the contrary, in the [2]rotaxane in which two viologen sites are connected by a larger and more rigid p-terphenylene bridge, the predominant location of the crown ether at the weak recognition site is achieved after just one single electron reduction.     

10]Annulene: bond shifting and conformational mechanisms for automerization

We report density-functional and coupled-cluster calculations on conformation change and degenerate bond shifting in [10]annulene isomers 1-5. At the CCSD(T)/cc-pVDZ//CCSD/6-31G level, conversion of the twist (1) to the heart (2) has a barrier of 10.1 kcal/mol, compared to Ea = 16.2 kcal/mol for degenerate "two-twist" bond shifting in 1. Pseudorotation in the all-cis boat isomer (3) proceeds with a negligible barrier. The naphthalene-like isomer 4 has a 3.9 kcal/mol barrier to degenerate bond shifting. The azulene-like isomer 5 is the only species for which the nature of the bond-equalized form (5-eq) depends on the method. At the CCSD(T)/cc-pVDZ//CCSD/6-31G level, 5-eq is 1.2 kcal/mol more stable than the bond-alternating form 5-alt. Conversion of 5-eq to 4 has a barrier of 12.6 kcal/mol. Despite being significantly nonplanar, both 5-eq and the transition state for bond shifting in 4 are highly aromatic based on magnetic susceptibility exaltations. On the basis of a detailed consideration of these mechanisms and barriers, we can now, with greater confidence, rule out 4 and 5 as candidates to explain the NMR spectra observed by Masamune. Our results support Masamune's original assignments for both isolated isomers.     

Air stable,sterically hindered ferrocenyl dialkylphosphines for palladium-catalyzed C[bond]C,C[bond]N,and C[bond]O bond-forming cross-couplings

Pentaphenylferrocenyl di-tert-butylphosphine has been prepared in high yield from a two-step synthetic procedure, and the scope of various cross-coupling processes catalyzed by complexes bearing this ligand has been investigated. This ligand creates a remarkably general palladium catalyst for aryl halide amination and for Suzuki coupling. Turnovers of roughly 1000 were observed for aminations with unactivated aryl bromides or chlorides. In addition, complexes of this ligand catalyzed the formation of selected aryl ethers under mild conditions. The reactions encompassed electron-rich and electron-poor aryl bromides and chlorides. In the presence of catalysts containing this ligand, these aryl halides coupled with acyclic or cyclic secondary alkyl- and arylamines, with primary alkyl- and arylamines, and with aryl- and primary alkylboronic acids. These last couplings provide the first general procedure for reaction of terminal alkylboronic acids with aryl halides without toxic or expensive bases. The ligand not only generates highly active palladium catalysts, but it is air stable in solution and in the solid state. Palladium(0) complexes of this ligand are also air stable as a solid and react only slowly with oxygen in solution.     

Synthesis and crystallographic characterization of a ‘palladadehydrobenzo[19]annulene’

The trans-palladium bis(σ-acetylide) complex (Et₃P)₂Pd(C₃₀H₁₂) (2) was synthesized from hexane 4 in 77% yield via a simple three-step process. The X-ray crystal structure of 2 shows a strained and warped annulenic core upon insertion of the organometallic fragment. UV-vis data of the molecule suggest limited electronic delocalization throughout the metallacycle.     

Wagner-Meerwein rearrangement of a [3.3.3]- to a [4.3.3]propellane: deuterium tracer and conformational analysis

Formation of (-)-[4.3.3]propellane 4 from (-)-14-hydroxymodhephene (2) proceeds through a Wagner-Meerwein rearrangement via C3--C4 bond-shift to give a stable intermediate, dimethylcyclohexadienyl cation A, which undergoes deprotonation. Herein, this mechanism was investigated by using a deuterium labeled substrate at the C-14 methylene group of (-)-2, which was incorporated into the C-4 position of (-)-[4.3.3]propellane 4. The stereostructure of (-)-4 was investigated by applying a combination of NMR experimental and theoretical approaches.     

Mechanism of C[bond]H bond activation/C[bond]C bond formation reaction between diazo compound and alkane catalyzed by dirhodium tetracarboxylate

The B3LYP density functional studies on the dirhodium tetracarboxylate-catalyzed C-H bond activation/C-C bond formation reaction of a diazo compound with an alkane revealed the energetics and the geometry of important intermediates and transition states in the catalytic cycle. The reaction is initiated by complexation between the rhodium catalyst and the diazo compound. Driven by the back-donation from the Rh 4d(xz) orbital to the C[bond]N sigma*-orbital, nitrogen extrusion takes place to afford a rhodium[bond]carbene complex. The carbene carbon of the complex is strongly electrophilic because of its vacant 2p orbital. The C[bond]H activation/C[bond]C formation proceeds in a single step through a three-centered hydride transfer-like transition state with a small activation energy. Only one of the two rhodium atoms works as a carbene binding site throughout the reaction, and the other rhodium atom assists the C[bond]H insertion reaction. The second Rh atom acts as a mobile ligand for the first one to enhance the electrophilicity of the carbene moiety and to facilitate the cleavage of the rhodium[bond]carbon bond. The calculations reproduce experimental data including the activation enthalpy of the nitrogen extrusion, the kinetic isotope effect of the C[bond]H insertion, and the reactivity order of the C[bond]H bond.     

Wire-like PtC[triple bond]CC[triple bond]CC[triple bond]CC[triple bond]CPt moieties surrounded by double-helical "insulation": new motifs featuring P(CH2)20P and P(CH2)4O(CH2)2O(CH2)4P linkages

Ring-closing alkene metatheses of trans,trans-(C6F5)(Ph2P-Z-CH=CH2)2Pt(C[triple bond]C)4Pt(Ph2P-Z-CH=CH2)2(C6F5) (Z = (CH2)9, (CH2)4O(CH2)2), followed by hydrogenation, give the title compounds; the former exhibits an exceptionally twisted conformation, and the latter establishes that functional groups can be incorporated into the flexible sp3 chain.     

Absolute configuration and conformation of 1,1′-spirob[benz[g]indan]

Two diastereomers of 3,3′-di-t-butyl-1,1′-spirobi[benz[g]indan] have been prepared; c.d. spectral evidence is presented for the difference between their conformations.     

The oxidation-state dependent structural conformation and supramolecular function of a redox-active [2]rotaxane in solution

A new NMR technique, namely paramagnetic suppression spectroscopy (PASSY), has been used to study the oxidation-state dependent structural conformation and supramolecular function of redox-active rotaxanes and catenanes in solution and at the surfaces of nanoparticles. Specifically, this technique has been used to study the structural conformation and supramolecular function in solution of a redox-active [2]rotaxane and the corresponding radical cation formed by a one-electron reduction. The findings of this and related studies provide important insights into the design of nanoscale devices based on rotaxanes and catenanes.