Are the electrospray mass spectra of proteins related to their aqueous solution chemistry?

Institute for Environmental Chemistry, National Research Council of Canada, Ottawa, Ontario, Canada The shape of the profile described by the relative abundances of multiply charged ions of proteins in the electrospray mass spectrum can be described by means of one or more Gaussian functions. An aqueous solution equilibrium model of the distribution of multiply charged ions of equine cytochrome c and myoglobin has been shown to match qualitatively the shape of the distribution of these ions in an electrospray mass spectrum. Monotonic functions such as the quadrupole mass spectrometric transmission efficiency may alter the centroid of the profile, but the shape of the ion abundance pattern appears to be controlled by the aqueous solution chemistry of the proteins. NRCC No. 32938.     

Solvent-derived metal oxides in electrospray mass spectrometry of metal salt solutions

The electrospray mass spectra of MX₂and MX₃salts (where X is typically halide or nitrate) in protic and aprotic solvents, and solvent mixtures were examined. Comparisons of species responses with equilibrium aqueous solution concentrations were made. For MX₂salts, a good correlation between MOH⁺ response and MOH⁺ solution concentration was observed under conditions where the collision energy was nominally zero. Cu(II) is easily reduced in acetonitrile to Cu(I); Cu(I) was the principal species observed in the electrospray mass spectrum of Cu(II) in acetonitrile whereas Cu(II) was the principal species observed in that of Cu(II) in dimethyl sulphoxide. Gas-phase reactions between solvated clusters produced by electrospray and a second solvent vapour were examined. M³⁺clusters were the principal ions observed when an aqueous solution of MX₃was sprayed in the presence of aprotic solvent vapours.     

The abundances of fragment ions formed via skeletal rearrangements from 2,5-disubstituted-1,3,4-oxadiazoles and their theoretical calculated stabilities

Protonated molecules of 2,5-di-R1,R2-substituted-1,3,4-oxadiazoles lose isocyanic acid (loss of mass 43) via skeletal rearrangement. This was observed in low-energy CID mass spectra recorded by using electrospray ionisation (ESI). On electron ionisation induced decomposition these compounds also reveal complex skeletal rearrangement, consisting on N2 and CO elimination, leading to the formation of fluorene or indene type ions. It was found that abundances of fragment ions formed in these processes are in good agreement with their theoretically calculated stabilities. In the case of ESI use the fragment ion abundances were calculated in relation to [M+H]+ ion abundances and for EI use, where extensive fragmentations proceed, the sums of the abundances of [M-N2-CO]+. ions and abundances of fragment ions derived from them, were expressed as a percentage of total-ion current.     

Electrospray mass spectra of protein cations formed in basic solutions

The electrospray mass spectra of gramicidin S cations that originated from 0.2 M solutions of 18 nitrogen-containing bases were examined. The relative abundances of the [M + 2H]²⁺ to the [M + H]⁺ ion were found to correlate not with the solution pH but with the proton affinities of the bases. It is postulated that some of the [M + 2H]²⁺ and the [M + H]⁺ ions exist as adducts with the nitrogen bases in solution, these adducts being desorbed into the gas phase during electrospray and dissociated in the lens region via collision-induced dissociations to yield apparent proton attachment spectra. Some of these adducts were observed under nominally zero collision energy conditions.     

Observation and implications of high mass-to-charge ratio ions from electrospray ionization mass spectrometry

High mass-to-charge ratio ions (> 4000) from electrospray ionization (ESI) have been observed for several proteins, including bovine cytochrome c (M _r 12,231) and porcine pepsin (M _r 34,584), by using a quadrupole mass spectrometer with an m/z 45,000 range. The ESI mass spectrum for cytochrome c in an aqueous solution gives a charge state distribution that ranges from 12 + to 2 +, with a broad, low-intensity peak in the mass-to-charge ratio region corresponding to the [M + H]⁺ ion. the negative ion ESI mass spectrum for pepsin in 1% acetic acid solution shows a charge state distribution ranging from 7? to 2?. To observe the [M - H]^? ion, harsher desolvation and interface conditions were required. Also observed was the abundant aggregation of the protens with average charge states substantially lower than observed for their monomeric counterparts. The negative ion ESI mass spectrum for cytochrome c in 1–100 mM NH₄OAc solutions showed greater relative abundances for the higher mass-to-charge ratio ions than in acuidic solutions, with an [M - H]^? ion relative abundance approximately 50% that of the most abundant charge state peak. The observation that protein aggregates are formed with charge states comparable to monomeric species (at fower mass-to-charge ratios) suggests that the high mass-to-charge ratio monomers may be formed by the dissociation of aggregate species. The observation of low charge state and aggregate molecular ions concurrently with highly charged species may serve to support a variation of the charged residue model, originally described by Dole and co-workers (Dole, M., et al. J. Chem. Phys. 1968, 49, 2240; Mack, L. L., et al. J. Chem. Phys. 1970, 52, 4977) which involves the Coulombically driven formation of either very highly solvated molecular ions or lower ananometer-diameter droplets.     

Mechanism of production of ions in electrospray mass spectrometry

A mechanism for the production of multiply charged molecular ion species in electrospray mass spectrometry (ES-MS) is still required. A concise discussion of a recently published ionic solution equilibrium model offering a partial mechanism is presented. That publication proposed that the ion abundance–charge profile could be fitted by one or a series of superimposed Gaussian functions, in accord with a solution equilibrium model. It is shown that indeed a simulated mass spectrum based on a solution odel can compare well with the observed spectrum. However, some new and recently published experimental evidence is presented which shows that the ES mass spectra of many proteins give rise to multiply charged molecular ions which carry higher charges than those calculated by the model. Further, the ion abundance–charge profile is very sensitive to some experimental parameters, e.g. cone voltage; it does not necessarily reflect the solution or gaseous ion populations in the mass spectrometer source. Therefore, the concept that gaseous multi-charged ions originate from equivalently charged solvated ions in electrically neutral solution must be treated with caution.     

Electrospray Ionization Mass Spectrometric Analysis of Aqueous Polysulfide Solutions

The speciation of polysulfides in aqueous solutions was investigated by electrospray – ion trap and electrospray – time of flight mass spectrometry. The pH dependence of the observed total dissolved polysulfides concentration followed the trend calculated based on reported thermodynamic constants. However, the observed species distributions were substantially different from those calculated based on thermodynamic coefficients derived by UV spectroscopy. Notably, large abundances of heptasulfide, octasulfide and nonasulfide species were observed throughout the pH range 6 to 11. The large molecular weight anions had not been reported before in aqueous solutions although indirect evidence had suggested their existence.     

Electrospray mass spectrometry: Ethylene glycol as a solvent and its effects on ion desorption

Ethylene glycol solutions of gramicidin S, myoglobin and tetrabutylammonium bromide were analysed by means of electrospray mass spectrometry and their spectra were compared with those of aqueous solutions. The evaporation of water and ethylene glycol droplets, initially at room or elevated temperature, in air at room temperature was modelled. It was found that under conditions where a water droplet's radius would shrink by ～30%, an ethylene glycol droplet shrinks negligibly. Further, droplets that are initially hot (such as those that are ejected from a heated electrospray needle) cool very rapidly owing to evaporation and heat loss to ambient air, and subsequently evaporate much like droplets that are initially at room temperature. For gramicidin S, the ion abundances in ethylene glycol as solvent were ～200 times lower than those in water under room temperature operating conditions. In experiments where the spray probe was heated to ～100°C to reduce the viscosity of ethylene glycol, the gramicidin response difference between the solvents decreased to about a factor of 40. Similar trends were observed for myoglobin and the tetrabutylammonium ion. The gramicidin abundances in ethylene glycol, relative to those in water, are orders of magnitude too large to be accounted for using the conventional solvent evaporation model. It is speculated that decreasing the viscosity increases the velocity of ions drifting in ethylene glycol towards the solution/air interface and increases the total number of analyte ions desorbed at the Taylor cone during electrospray.     

Tandem mass spectrometry of deprotonated iodothyronines

In order to assist with the development of more selective and sensitive methods for thyroid hormone analysis the [M-H]- anions of the iodothyronines T4, T3, rT3, (3,5)-T2 and the non-iodinated thyronine (T0) have been generated by negative ion electrospray mass spectrometry. Tandem mass spectra of these ions were recorded on a triple-quadrupole mass spectrometer and show a strong analogy with the fragmentation pathways of the parent compound, tyrosine. All iodothyronines also show significant abundances of the iodide anion in their tandem mass spectra, which represents an attractive target for multiple reaction monitoring (MRM) analysis, given that iodothyronines are the only iodine bearing endogenous molecules. Characteristic fragments are observed at m/z 359.7 and 604.5 for rT3 but are absent in the spectrum of T3, thus differentiating the two positional isomers. The striking difference in the fragmentation patterns of these regioisomeric species is attributed to the increased acidity of the phenol moiety in rT3 compared with T3.     

Differentiation of 2-alkylthioorotic acids, methyl and ethyl 2-alkylthioorotates and hydrazides of 2-alkylthioorotic acids by using electron ionization mass spectra

Electron ionization mass spectra of 12 derivatives of 2-thioorotic acid have been discussed and general fragmentation routes of their molecular ions have been proposed. The compounds under discussion were three groups of four chemical species (2-alkylthioorotic acid, methyl 2-alkylthioorotate, ethyl 2-alkylthioorotate and 2- alkylthioorotic hydrazide) each with the same relative molecular mass. The comparison of selected ions relative abundances and their correlation with the abundance of molecular ions enable differentiation between isomeric or isobaric species in this class of compounds.     

Fragmentation of Moxifloxacin and Its Analogs by Electrospray Ionization Time-of-Flight Mass Spectrometry

The fragmentation of patterns of moxifloxacin, 2-N-methylated moxifloxacin (analog 1), and 1-cyclopropyl-6,7-difluoro-8-methoxy-4-oxo-3-quinolinecarboxylic acid (analog 2) were investigated by electrospray ionization quadrupole time-of-flight tandem mass spectrometry in the positive-ion mode. Many unusual ions were detected in the tandem mass spectra of moxifloxacin. Although the structures of moxifloxacin and analog 1 were similar, the relative abundances of products varied greatly. Comparison of the relative abundances of the product ions that lost CO₂ or H₂O and complementary product ions resulting from sequential four-membered hydrogen rearrangement showed that the differences were related to the protonation sites. The loss of HF, probably though the formation of an ion/neutral complex, is of scientific interest. The identities of the major product ions were confirmed by deuterium-labeling experiments that demonstrated an unusual loss of a deuterium atom. The major differences in fragmentation patterns were compared to previous reports in the literature.     

Structural characterization by infrared multiple photon dissociation spectroscopy of protonated gas-phase ions obtained by electrospray ionization of cysteine and dopamine

Structural characterization of protonated gas-phase ions of cysteine and dopamine by infrared multiple photon dissociation (IRMPD) spectroscopy using a free electron laser in combination with theory based on DFT calculations reveals the presence of two types of protonated dimer ions in the electrospray mass spectra of the metabolites. In addition to the proton-bound dimer of each species, the covalently bound dimer of cysteine (bound by a disulfide linkage) has been identified. The dimer ion of m/z 241 observed in the electrospray mass spectra of cysteine has been identified as protonated cystine by comparison of the experimental IRMPD spectrum to the IR absorption spectra predicted by theory and the IRMPD spectrum of a standard. Formation of the protonated covalently bound disulfide-linked dimer ions (i.e. protonated cystine) from electrospray of cysteine solution is consistent with the redox properties of cysteine. Both the IRMPD spectra and theory indicate that in protonated cystine the covalent disulfide bond is retained and the proton is involved in intramolecular hydrogen bonding between the amine groups of the two cysteine amino acid units. For cysteine, the protonated covalently bound dimer (m/z 241) dominated the mass spectrum relative to the proton-bound dimer (m/z 243), but this was not the case for dopamine, where the protonated monomer and the proton-bound dimer were both observed as major ions. An extended conformation of the ethylammonium side chain of gas-phase protonated dopamine monomer was verified from the correlation between the predicted IR absorption spectra and the experimental IRMPD spectrum. Dopamine has the same extended ethylamine side chain conformation in the proton-bound dopamine dimer identified in the mass spectra of electrosprayed dopamine. The structure of the proton-bound dimer of dopamine is confirmed by calculations and the presence of an IR band due to the shared proton. The presence of the shared proton in the protonated cystine ion can be inferred from the IRMPD spectrum.

Improved precision and accuracy for high-performance liquid chromatography/Fourier transform ion cyclotron resonance mass spectrometric exact mass measurement of small molecules from the simultaneous and controlled introduction of internal calibrants via a second electrospray nebuliser

The use of a second electrospray nebuliser has proved to be highly successful for exact mass measurement during high-performance liquid chromatography/Fourier transform ion cyclotron resonance mass spectrometry (HPLC/FTICRMS). Much improved accuracy and precision of mass measurement were afforded by the introduction of the internal calibration solution, thus overcoming space charge issues due to the lack of control over relative ion abundances of the species eluting from the HPLC column. Further, issues of suppression of ionisation, observed when using a T-piece method, are addressed and this simple system has significant benefits over other more elaborate approaches providing data that compares very favourably with these other approaches. The technique is robust, flexible and transferable and can be used in conjunction with HPLC, infusion or flow injection analysis (FIA) to provide constant internal calibration signals to allow routine, accurate and precise mass measurements to be recorded.     

Characterization of bis-carboxyethyl germanium sesquioxide and its complexes with amino acids using electrospray QqTOF mass spectrometry

This work deals with the application of electrospray ionization mass spectrometry (ESI-MS) with QqTOF analyzer for the characterization of Ge-132 complexes with different amino acids in aqueous solution with the emphasis on the determination of elemental composition. ESI mass spectra provide complementary structural information in both polarity modes. Some reaction products were suggested based on the interpretation of high resolution mass spectra. Moreover, the experimental isotopic distributions of ions were compared with theoretical calculated isotopic clusters. The superposition of many ion overlays was observed due to the wide isotopic distributions of studied polyisotopic complexes. The high resolution QqTOF analyzer enabled the discrimination of these ion signals differing at least by 0.12 mass units. The occurrence of overlaid signals from ions with smaller mass difference was successfully recognized based on the shift of isotopic distribution, and their elemental composition was verified using mass accuracies of non-overlaid isotopes at the borders of the isotopic cluster. Mass spectra obtained with ion trap and single quadrupole analyzers support QqTOF data.     

Tandem Mass Spectrometry of Trimethylsilyl-Terminated Poly(Dimethylsiloxane) Ammonium Adducts Generated by Electrospray Ionization

Ammonium adducts of trimethylsilyl-terminated poly(dimethylsiloxane) (CH₃-PDMS) produced by electrospray ionization were submitted to collision induced dissociation and revealed a particular MS/MS behavior: the same three main product ions at m/z 221, 295, and 369 were always generated in very similar relative abundances regardless of the size of the precursor ion. Combining accurate mass measurements and ab initio calculation allowed very stable cyclic geometries to be obtained for these ionic species. Dissociation mechanisms were proposed to account for the three targeted ions to be readily generated in a two-step or a three-step reaction from any CH₃-PDMS ammonium adducts. A second set of three product ions was also observed with low abundance at m/z 207, 281, and 355, which were shown in MS³ experiments to be formed in secondary reactions. An alternative dissociation process was shown to consist of a concerted elimination of ammonia and methane and the need for a methyl of an end-group to be involved in the released methane molecule would account for this reaction to mainly proceed from the smallest precursor ions.     

LC/MS confirmation of ionophores in animal feeds.

A liquid chromatographic/mass spectrometric (LC/MS) electrospray confirmation method has been developed to confirm 4 ionophores (monensin, lasalocid, salinomycin, and narasin) in a variety of animal feeds using a single quadrupole mass spectrometer. The sodium ions of these compounds are dominant in the electrospray mass spectrum. Using optimized "in-source" collision induced dissociation, characteristic fragment ions seen previously using MS/MS can be observed. The drugs were extracted from the feed matrix using hexane-ethyl acetate and isolated using a silica solid-phase extraction cartridge. These ionophores were confirmed in both medicated feeds and nonmedicated feeds fortified with these drugs at the 1-50 ppm level. In addition, this method was used to confirm residues of monensin in a nonmedicated feed that was collected from a feed mill immediately after the production of a similar feed that was medicated with high levels of monensin.     

A study of Src SH2 domain protein-phosphopeptide binding interactions by electrospray ionization mass spectrometry

The noncovalent binding of various peptide ligands to pp60^src (Src) SH2 (Src homology 2) domain protein (12.9 ku) has been used as a model system for development of electrospray ionization mass spectrometry (ESI-MS) as a tool to study noncovalently bound complexes. SH2 motifs in proteins are critical in the signal transduction pathways of the tyrosine kinase growth factor receptors and recognize phosphotyrosine-containing proteins and peptides. ESI-MS with a magnetic sector instrument and array detection has been used to detect the protein-peptide complex with low-picomole sensitivity. The relative abundances of the multiply charged ions for the complex formed between Src SH2 protein and several nonphosphorylated and phosphorylated peptides have been compared. The mass spectrometry data correlate well to the measured binding constants derived from solution-based methods, indicating that the mass spectrometry-based method can be used to assess the affinity of such interactions. Solution-phase equilibrium constants may be determined by measuring the amount of bound and unbound species as a function of concentration for construction of a Scatchard graph. ESI-MS of a solution containing Src SH2 with a mixture of phosphopeptides showed the expected protein-phosphopeptide complex as the dominant species in the mass spectrum, demonstrating the method’s potential for screening mixtures from peptide libraries.     

Electrospray ionization mass spectrometric analysis of microcystins, cyclic heptapeptide hepatotoxins: modulation of charge states and [M+H]+ to [M+Na]+ ratio

Electrospray ionization mass spectrometry was used to develop a rapid, sensitive, and accurate method for determination and identification of hepatotoxic microcystins, cyanobacterial cyclic heptapeptides. To optimize the electrospray ionization conditions, factors affecting charge state distribution, such as amino acid components of sample, proton affinity of the additives, and additive concentration, were investigated in detail and a method for controlling charge states was developed to provide molecular-related ions for assignment of molecular weight and reasonably abundant precursor ions for MS/MS analysis. A procedure for identification of microcystins consisting of known amino acids was proposed: for microcystins giving abundant [M + 2H]2+ ions, the addition of nitrogen-containing bases to the aqueous sample solution is effective to obtain an increased intensity of [M + H]+ ions, whereas the addition of Lewis acids containing nitrogen can produce increased abundances of [M + 2H]2+ ions for microcystins giving weak [M + 2H]2+ ions. Microcystins possessing no arginine residue always give sodium adduct ions [M + Na]+ as the base peak, and these are difficult to fragment via low energy collision-induced dissociation to yield structurally informative products; the addition of oxalic acid increases [M + H]+ ion abundances, and these fragment readily.     

Electrolytic deposition of metals on to the high-voltage contact in an electrospray emitter: implications for gas-phase ion formation

The electrospray ion source is an electrolytic flow cell. Electrolytic reactions in the electrospray emitter maintain the production of charged droplets by this ion source that contain an excess of ions of one polarity. These redox reactions necessarily change the composition of the solution that initially enters the emitter. As a result, the ions ultimately observed in the gas phase by electrospray mass spectrometry (ESMS) may be substantially influenced by both the nature and extent of these electrochemical reactions. It is demonstrated in this paper that Ag(+), Cu(2+) and Hg(2+) ions in solution can be electrolytically reduced and deposited as the respective metals on to the surface of the high-voltage contact in the electrospray emitter in negative ion mode electrospray. The deposited metals are shown to be liberated from the surface by switching the electrospray high-voltage polarity to operate in the positive ion mode. The deposited metals are oxidized in positive ion mode, releasing the metal ions back into solution where they are detected in the electrospray mass spectrum. In a semi-quantitative analysis, it was found that up to 50% of the Ag(+) in a 2.5 microM solution was deposited on the high-voltage contact of the emitter as the solution flowed through the emitter. Deposition of Cu(2+) and Hg(2+) was less efficient. These data illustrate that in the analysis of metals by ESMS, one must be aware that both the concentration and form of the metals may be altered by electrochemical processes in the emitter. Hence reduction or oxidation of metals in the electrospray emitter, which may remove ions from solution, or change metal valence, would be expected to impact both quantitative metal determinations and metal speciation attempts using ESMS.     

Acute pressure dependence of the electron ionization mass spectrum of molybdenyl acetylacetonate

Formation of both fragment and polymeric ions observed in the electron impact mass spectrum of molybdenyl acetylacetonate exhibit a strong dependence on the instantaneous pressure in the ionization source. The indicated source pressure increases with increasing direct probe temperature. Utilizing a probe temperature increase of only 30°C min^?1, the relative abundances of some ions can change by factors as high as 15 over a period of 60 s. Some ions are remarkably transient, appearing in only the few scans during which the source pressure corresponds to just that required for their formation. These rapid changes in the ion relative abundances are also exhibited in tandem mass spectra, and especially in parent ion scans.