Continuous-flow fast atom bombardment mass spectrometry

The continuous-flow fast atom bombardment probe performs equally well with or without a high-performance liquid chromatography column producing clean spectra containing little or no background noise. Its function as a liquid chromatography-mass spectrometry interface for labile and involatile samples has been illustrated with reference to dansylated amino acids. The versatility of the new probe has been exemplified by on-line enzymatic peptide sequencing.     

Continuous-flow fast atom bombardment mass spectrometry of oligonucleotides

Although frit-fast atom bombardment (frit-FAB) and continuous-flow FAB mass spectrometry have become standard methods for the analysis of peptides and peptide mixtures, these techniques have not been applied previously to the analysis of oligonucleotides. Mobilephase composition, flow rate, and sample size were optimized for the analysis of oligonucleotides by negative ion frit-FAB mass spectrometry (a type of continuous-flow FAB mass spectrometry). With a mobile phase consisting of methanol/water/triethanolamine (80:20:0.5, v/v/w), flow injection frit-FAB analysis of oligonucleotides showed lower limits of detection compared to standard probe FAB mass spectrometry. For example, in order to obtain a signal-to-noise ratio of 3:1, 38 prnol of d(GTIAAC) were required for frit-FAB mass spectrometry and 62 pmol were required for standard probe FAB mass spectrometry. The largest difference between frit-FAB and standard probe FAB was observed for d(pC)₅, for which the limit of detection by frit-FAB was approximately 11-fold lower than by standard FAB mass spectrometry. Adjustment of the mobile phase to pH 7 with trifluoroacetic acid increased the limit of detection (reduced sensitivity) a minimum of sixfold. Equimolar mixtures of two or three oligonucleotides produced deprotonated molecules in identical relative abundances whether analyzed by frit-FAB or standard probe FAB mass spectrometry. Finally, frit-FAB liquid chromatography mass spectrometry was demonstrated by separating mixtures of oligonucleotides on a β -cyclodextrin high-performance liquid chromatography column with a mobile phase containing methanol, water, and triethanolamine.     

Chemical reactions in fast atom bombardment mass spectrometry

Examples of various chemical reactions occurring in the matrix or in the selvedge region in fast atom bombardment (FAB) mass spectrometry are discussed. These are categorized as oxidations and reductions; substitutions; clusterings and additions; and sample decomposition or transformation. Some reactions observed showed significant time behaviour and in one case it was possible to determine rate constants. These data suggest that chemical reactions can be accelerated significantly by fast atom bombardment.     

Mechanism for dehalogenation reactions in fast atom bombardment mass spectrometry

The mechanism of a dehalogenation reaction that occurs during fast atom bombardment (FAB) mass spectrometry was examined using halogenated nucleosides as model compounds. For aglycone-halogenated nucleosides, an inverse linear relationship exists between the extent of FAB dehalogenation and the calculated electron affinity of an individual nucleoside. The degree of dehalogenation for a given nucleoside also varies inversely with the calculated electron affinity of most FAB matrices. The observed dehalogenation reaction can be completely inhibited when matrices with positive electron affinities, such as 3-nitrobenzyl alcohol and 2-hydroxyethyl disulfide, are used. High-performance liquid chromatographic analysis of the bulk glycerol matrix following exposure to the FAB beam indicates measurable amounts of dehalogenated product, suggesting that this reaction occurs in the condensed phase prior to gas-phase ion formation. A dehalogenation mechanism involving thermal electron capture and subsequent negative charge stabilization is consistent with these observations.     

Fast atom bombardment mass spectral study of tetracycline antibiotics

In the fast atom bombardment mass spectra of tetracyclines, ammonia elimination fragment ions, [M + H – NH₃]⁺ and [M + H – NH₃ – H₂O]⁺, appeared with considerable abundances. A plausible mechanism for the loss of ammonia from [M + H]⁺ was discussed based on results by measurements on various types of tetracyclines and benzamides as the model compounds and B/E linked scanning. The results indicated that the loss of ammonia occurred in the carboxyamide moiety in the A ring and was accelerated by an ortho-hydroxy group. The same fragmentations were observed in the electrospray mass spectra of tetracyclines with a skimmer-capillary voltage differential of 150 V.     

Negative-ion fast atom bombardment mass spectrometry of N-phosphoamino acids

The fragmentation patterns of N-phosphoamino acids in negative-ion fast atom bombardment mass spectrometry (FABMS) showed different characteristics to those in positive-ion FABMS. Six typical N-diisopropyloxyphorphorylamino acids all had intense [M ? 1]^? peaks, and they underwent similar fragmentation pathways. In general, the elimination of one alkene molecule followed by the loss of one molecule of alcohol occurred. They also favoured an N → O rearrangement reaction, followed by fragmentation to (RO)₂ PO₂^? and (RO) (HO)PO₂^?.     

The fast atom bombardment mass spectra of xanthane dyes

The Fast Atom Bombardment mass spectra of a number of xanthane dyes are reported. These dyes are insufficiently volatile to give spectra by conventional electron impact ionization. Fragmentation pathways have been determined by metastable linked scan techniques and accurate masses obtained by peak matching. The xanthane dyes may be readily identified from their FAB spectra by the presence of characteristic ions.     

In situ N-phosphorylation of oligopeptides for fast atom bombardment mass spectrometry

Positive ion fast atom bombardment mass spectrometry (FABMS) of in situ N-phosphorylated oligopeptides showed intense quasi-molecular ions together with the successive alkene loss fragment ions, which afford multiple checks of the unequivocal reality of the relative molecular mass of the tested samples. More interesting, in a novel cleavage pattern only the N-phosphoryl fragment ions gave intense peaks, the C-terminal series ions being suppressed. For each of the N-terminal ions, losses of alkenes also occur to provide multiple checks for the existence of these ions. The FABMS of the in situ N- phosphorylated oligopeptides might provide an easily accessible routine method for peptide sequencing.     

m-nitrobenzyl alcohol electrochemistry in fast atom bombardment mass spectrometry

The efficacy of m-nitrobenzyl alcohol (NBA) as a solvent (matrix) for fast atom bombardment (FAB) mass spectrometry of a group of pyrazolate-bridged dirhodium A-frame complexes has been assessed. Although NBA is frequently used to mitigate the formation of artifacts in FAB/MS of organometallics and other materials susceptible to bombardment-induced reactions, substantial evidence indicates that such reactions cause the formation of artifacts in the spectra obtained here. Parallel absorption spectroscopic studies have established that NBA is capable of inducing both oxidation and reduction reactions independent of ion bombardment, depending on analyte reduction half-wave potential (E_1/2). From the known electrochemistry of the complexes studied, it can be estimated that 1020 mV > E_1/2 > 500 mV for the reaction of NBA serving as a reducing agent, while 500 mV > E_1/2 > 424 mV for the reduction potential of NBA. However, in the presence of bombardment the former E_1/2 must be at least as low as 356 mY, and the latter E_1/2 must be at least as high as 1188 mY. The kinetics of redox reactions involving NBA, and therefore their influence on the appearance of FAB mass spectra, will be highly sample-dependent. However, this study illustrates an important potential role for redox reactions when NBA is used as a solvent, especially in the presence of bombardment in FAB/MS. Although analyte reaction products could be identified, substantial efforts aimed at identifying NBA oxidation and reduction products did not yield any definitive results due to the complexity of product mixtures.     

Improving fast atom bombardment mass spectra: The influence of some controllable parameters on spectral quality

The relative effects of adjustable fast atom bombardment (FAB) parameters (choice of matrix, primary atom flux, and primary atom energy) on the appearance of FAB spectra (including signal-to-noise, signal-to-background, and signal-to-matrix ratios) of several organic dyes have been investigated. Beam-induced chemical damage is minimized by lowering the primary atom flux, by raising the primary atom energy, and by selecting a matrix with radical scavenging properties (e.g., m-nitrobenzyl alcohol). The relative importance in minimizing this chemical damage is choice of matrix > primary atom flux > (nominal) primary atom energy, but optimization of the parameters involves a trade-off between sensitivity and damage. The effect of these parameters on thermal damage (fragmentation) is much less. It can be concluded from comparison of the dyes that the extent of beam damage does not depend simply on the standard reduction potential of the analyte.     

Analysis of xanthates by negative-ion fast atom bombardment mass spectrometry

A new technique using negative-ion fast atom bombardment mass spectrometry for the analysis of xanthates and related compounds is described. Electron impact and positive-ion fast atom bombardment mass spectrometry produced no structurally related fragment ions or observable molecular ions at the expected m/z values. It was demonstrated that negative-ion fast atom bombardment ionization was the most suitable method of ionization for structure elucidation studies for the compounds described.     

Use of fast atom bombardment mass spectrometry for the characterization of nitroaromatic isomers

Positive and negative ion fast atom bombardment (FAB) mass spectra of some monosubstituted nitroaromatic isomers are reported. Generally ions carresponding to [M + H]⁺ and M⁺ are observed in the positive ion FAB spectra; ions such as [M ? H] ^? and M^?˙ are observed in the negative ion FAB spectra. The use of FAB mass spectra to distinguish the isomers is discussed. Comparisons of FAB, chemical ionization and electron impact mass spectra of the same isomers (wherever possible) are reported. The structural information obtained in the negative ion FAB spectra complement those obtained in the positive ion FAB spectra.     

Caesium fluoride as a mass calibrant in fast atom bombardment mass spectrometry

Caesium fluoride was shown to afford advantages over caesium iodide as a mass-calibration compound for fast atom bombardment mass spectrometry.     

Direct microanalysis by negative ion fast atom bombardment mass spectrometry

In negative ion fast atom bombardment (FAB) mass spectrometry, the use of a liquid matrix comprised of 15-crown-5—glycerol (1:10, v/v) enabled the molecular weight determination of small amounts of non-volatile acidic molecules. This ionization process could result in detection limits of less than one-fifth of those obtained using only glycerol as matrix. The function of the matrix as a proton acceptor is emphasized.     

Matrix effects on the fast atom bombardment mass spectra of palladium complexes

In an attempt to identify and characterize the intermediates involved in multi-step palladium catalyzed coupling reactions, under fast atom bombardment (FAB) conditions, the selection of a matrix to enhance ion formation without degrading the palladium complex is critical. In general, it is observed that the analysis of tetrakis(triphenylphosphine)palladiurn(0) using glycerol, m-nitrobenzyl alcohol or o-nitrophenyl octyl ether as the FAB matrix compound produces several ions which correspond to complexes of the type Pd_xL_yO_z⁺ (L = PPh₃; x = 1-4; y = 1-4; z = 0-2), in addition to clusters containing one or more matrix molecules. FAB mass spectra generated using triethanolamine- or tetramethylene sulfone (sulfolane) are observed to contain ions related to the palladium(0) complex with little or no interference from ions related to the oxidation or reduction processes.     

Analysis of some eicosanoids by continuous-flow fast atom bombardment mass spectrometry

Continuous-flow fast atom bombardment has been used to analyze eicosanoids by selected-ion monitoring on a sector-field mass spectrometer operating in the negative-ion mode. The method has been optimized with respect to solvent composition and flow-rates. Detection limits were below 50 pg, and under optimal conditions a linear relationship between response and amount of substance was achieved. The method was successfully applied to the analysis of two spiked urine samples.