共查询到18条相似文献,搜索用时 109 毫秒
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5-甲基胞嘧啶在哺乳动物细胞中具有广泛的作用.而它被双脱氧家族Tet蛋白氧化所得的产物5-羟甲基胞嘧啶、5-醛基胞嘧啶和5-羧基胞嘧啶也被证明在细胞发育和5-甲基胞嘧啶动态平衡调控中具有关键的作用.已有的研究结果表明,Tet蛋白能够识别双链DNA上的5-甲基胞嘧啶,并将其氧化成5-羟甲基胞嘧啶、5-醛基胞嘧啶和5-羧基胞嘧啶.我们通过质谱仪检测发现,老鼠Tet1蛋白的DNA结合结构域还能识别和氧化单链DNA上的5-甲基胞嘧啶.这一发现暗示我们,Tet蛋白家族不但具有已经发现的氧化双链DNA上5-甲基胞嘧啶的功能,还有可能作用于DNA的复制及转录,甚至具有氧化单链RNA上对应的甲基修饰碱基的能力. 相似文献
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胞嘧啶、尿嘧啶和胸腺嘧啶都有酮式和烯醇式互变异构。有人认为DNA的错配频率,与酮,烯醇或氨,亚氨的互变异构平衡有关。迄今,在相同理论水平上同时对三种嘧啶互变异构体进行理论计算研究的文献较少, 相似文献
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基于纳米金探针和基因芯片的DNA检测新方法 总被引:2,自引:0,他引:2
运用荧光纳米金探针和基因芯片杂交建立一种新的DNA检测方法. 荧光纳米金探针表面标记有两种DNA探针: 一种为带有Cy5荧光分子的信号探针BP1, 起信号放大作用; 另一种为与靶DNA一部分互补的检测探针P532, 两种探针比例为5∶1. 当靶DNA存在时, 芯片上捕捉探针(与靶DNA的另一部分互补)通过碱基互补配对结合靶DNA, 将靶DNA固定于芯片上; 荧光纳米金探针通过检测探针与靶DNA及芯片结合, 在芯片上形成“三明治”复合结构, 最后通过检测信号探针上荧光分子的信号强度来确定靶DNA的量. 新方法检测灵敏度高, 可以检测浓度为1 pmol/L的靶DNA, 操作简单, 检测时间短. 通过改进纳米金探针的标记和优化杂交条件, 可进一步提高核酸检测的灵敏度, 这将在核酸检测方面具有重要的应用价值. 相似文献
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DNA荧光探针—荧光素-中性红体系的研究 总被引:5,自引:0,他引:5
基于DNA对荧光素(FL)-中性红(NR)分子间荧光能量转移的抑制作用,以荧光素-中性红为荧光探针,考察该探针与DNA的结合反应,建立了准确测定DNA的新方法,在pH=6.5条件下,hsDNA、ctDNA和smDNA的浓度与荧光素-中性红体系的荧光比值变化量Δ(Fd/Fa)成线性关系,响应线性范围分别为0.25-6.25μg/mL、0.10-5.00μg/mL、0.10-4.00μg/mL,0.025μg/mL和0.023μg/mL;分析测定了DNA合成样品,回收率91.3%-101.4%,相对标准偏差小于4.2%. 相似文献
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用密度泛函B3LYP/6-311++G**方法,对气相和水相中的5-醛基-1,2,3-三唑互变异构体进行了几何构型全自由度优化,获得了它们在气相和水相中的几何结构和电子结构.讨论了不同的取代基团和溶剂化效应对互变异构体的几何结构、能量以及互变异构反应活化能的影响.并进一步研究了N1-H、N2-H和N3-H型三唑之间的互变异构机理:(a)分子内质子转移;(b)水助质子转移.计算结果表明,途径(b)所需要的活化能较小,平均为101.31kJ/mol,途径(a)为211.70kJ/mol. 相似文献
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荧光能量转移体系在生化分析中的应用-吖啶橙(AO)-中性红(NR)荧光探针测定DNA研究 总被引:2,自引:0,他引:2
本文简述了以荧光能量转移体系测定DNA方法的发展过程,对近几年这一领域的新成果作了介绍;同时对吖啶橙(AO)-中性红NR为荧光探针测定DNA的条件进行分析,证明了该法具有灵敏度高、线性范围宽、检出限低、选择性好、抗干扰能力强等,该法为微量DNA定量分析提供了一个新的途径。 相似文献
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5-羟甲基胞嘧啶(5-hydroxymethylcytosine, 5hmC)是继5-甲基胞嘧啶(5-methylcytosine, 5mC)之后发现的第六种碱基, 已在多种哺乳动物组织和细胞中检出. 与5mC相比, 5hmC的含量更低, 但5hmC也具有非常重要的生物学功能. 已有的研究表明, 5hmC参与了染色体重新编程、基因表达的转录调控, 并在DNA去甲基化过程中发挥重要作用. 另外, 5hmC可能与特定肿瘤的发生密切相关, 有可能成为肿瘤早期诊断的生物标志物. 因此, 发展可靠、灵敏和准确的5hmC检测技术至关重要. 本综述针对DNA羟甲基化的检测及测序技术进行了简要介绍. 相似文献
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Background
Genome-wide aberrations of the classic epigenetic modification 5-methylcytosine (5mC), considered the hallmark of gene silencing, has been implicated to play a pivotal role in mediating carcinogenic transformation of healthy cells. Recently, three epigenetic marks derived from enzymatic oxidization of 5mC namely 5-hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC) and 5-carboxylcytosine (5caC), have been discovered in the mammalian genome. Growing evidence suggests that these novel bases possess unique regulatory functions and may play critical roles in carcinogenesis.Methods
To provide a quantitative basis for these rare epigenetic marks, we have designed a biotin–avidin mediated enzyme-based immunoassay (EIA) and evaluated its performance in genomic DNA isolated from blood of patients diagnosed with metastatic forms of lung, pancreatic and bladder cancer, as well as healthy controls. The proposed EIA incorporates spatially optimized biotinylated antibody and a high degree of horseradish-peroxidase (HRP) labeled streptavidin, facilitating signal amplification and sensitive detection.Results
We report that the percentages of 5mC, 5hmC and 5caC present in the genomic DNA of blood in healthy controls as 1.025 ± 0.081, 0.023 ± 0.006 and 0.001 ± 0.0002, respectively. We observed a significant (p < 0.05) decrease in the mean global percentage of 5hmC in blood of patients with malignant lung cancer (0.013 ± 0.003%) in comparison to healthy controls.Conclusion
The precise biological roles of these epigenetic modifications in cancers are still unknown but in the past two years it has become evident that the global 5hmC content is drastically reduced in a variety of cancers. To the best of our knowledge, this is the first report of decreased 5hmC content in the blood of metastatic lung cancer patients and the clinical utility of this observation needs to be further validated in larger sample datasets. 相似文献13.
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该文以DNA四面体纳米结构探针(TSP)为捕获探针,将辣根过氧化物酶标记的IgG抗体结合在纳米金颗粒表面(AuNPs-IgG-HRP)作为信号分子,构建了一种新型DNA甲基化电化学传感器。利用一步热变性法组装成TSP后,通过Au—S键固定在修饰纳米金颗粒的金电极表面,经过靶标DNA杂交、5-甲基胞嘧啶(5-mc)抗体及AuNPs-IgG-HRP结合后,用差分脉冲伏安法(DPV)进行检测。采用循环伏安法(CV)和电化学阻抗谱(EIS)对修饰电极的构建过程进行电化学表征。探究了杂交时间、5-mc抗体浓度、IgG-HRP加入体积、氢醌(HQ)和过氧化氢(H2O2)浓度对传感器的影响。在最佳条件下,该传感器对甲基化DNA的线性响应范围为1.0×10-15~1.0×10-10 mol/L,检出限(S/N=3)为4.4×10-16 mol/L。该传感器具有良好的选择性和稳定性,为DNA甲基化检测提供了新方法。 相似文献
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Gennady A. Evtugyn Anna V. Porfireva Tibor Hianik Maria S. Cheburova Herman C. Budnikov 《Electroanalysis》2008,20(12):1300-1308
Novel method of potentiometric detection of DNA‐protein interactions has been proposed. For this purpose, polymeric phenothiazine dyes, methylene blue (MB) and methylene green (MG), were electrochemically deposited onto the glassy carbon electrode and covered with double stranded DNA (dsDNA) as a target for antibodies (DNA‐sensor) or DNA aptamer specific to human α‐thrombin (aptasensor). The biosensors were consecutively incubated at pH 7.5 and 3.0 and the difference in potentials, ΔE, was used as a measure of protein concentration. The potentiometric DNA‐sensors were tested in standard serum of autoimmune disease patients (systemic lupus erythemathosus (SLE) and autoimmune thyroidites). It was shown, that the ΔE value of DNA‐sensor depends on the dilution of serum in the range from 1 : 1 to 1 : 100. Nonthermostated serum exhibited bell‐shape dependence of ΔE on serum dilution due to interfering effect of serine proteins at maximum dilution between 1 : 20 and 1 : 50. For SLE serum thermostated at 56 °C the ΔE linearly decreased as a function of serum dilution and reached saturation at dilution 1 : 20. Similarly the changes in the potential of aptasensor allowed us to determine the α‐thrombin in the range from 1 nM to 1 μM. The Faradic impedance spectra measured at presence of redox probe [Fe(CN)6]4?/3? revealed changes in the resistance and capacitance attributed to the shielding effect of anti‐DNA antibodies and an increase in the electron transfer. The developed potentiometric biosensors can be used for preliminary diagnostics of autoimmune diseases and thrombin detection with sensitivity comparable to traditional methods. The developed assay is, however simpler and cheaper in comparison with commonly used methods. 相似文献
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以钌(Ⅱ)多吡啶配合物[Ru(bipy)2DAFND](Cl O4)2(Ru-DAFND,bipy=2,2'-联吡啶,DAFND=4,5-二氮杂芴-9-对硝基苯腙)为指示剂,采用锁相放大技术构建了基于荧光猝灭原理的光纤DNA传感器,研究了传感器的性能。以p H 7.1的Tris缓冲溶液为介质,在2.6×10-8~5.4×10-6mol/L范围,ct DNA浓度与传感器光学敏感膜的相对滞后相移(Δφ)有较好的线性关系,检出限为8.4×10-9mol/L,响应时间为70 s。通过研究溶液p H值和干扰物对传感器性能的影响,表明该传感系统具有较好的重复性和稳定性。 相似文献
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本文构建DNA聚合酶I的新型DNA电化学传感器,将捕获探针通过Au-S键固定于Au基底表面,与互补靶序列杂交至点突变前一个碱基,通过DNA聚合酶Ⅰ将dUTP-biotin连接在目标DNA的检测位点,再与avidin-HRP反应,而后测定在TMB溶液中的电化学特性. 结果表明,DNA电化学传感电极的检测电流值与K-ras突变型基因浓度(1.0×10-15 ~ 1.0×10-10 mol·L-1)对数呈良好的线性关系,且灵敏度高,特异性较佳. 相似文献