Structures of 3,3′-dicarbometoxy-2,2′-bipyridine complexes with silver(I) and copper(II) cations

The structures of 3,3′-dicarbometoxy-2,2′-bipyridine (dcmbpy) complexes with copper(II) and silver(I) cations have been determined using single crystal X-ray-diffraction. The crystals of Cu(dcmbpy)Cl₂ are monoclinic, C2/c, a = 16.966(3), b = 18.373(3), c = 13.154(2) Å, β = 126.543(3)°. The crystals of Ag(dcmbpy)NO₃ · H₂O are also monoclinic, C2/c, a = 16.7547(13), b = 11.0922(9), c = 18.7789(18) Å, β = 100.228(7)°. The results have been compared with the literature data on the complexes of dcmbpy and its precursors: 2,2′-bipyridine (bpy) and 3,3′-dicarboxy-2,2′-bipyridine (dcbpy). Two types of complexes of 3,3′-carboxy derivatives of bpy are distinguished: (1) with metal atom bonded to two N atoms of the same molecule and (2) with metal atom bonded to two N atoms of two different molecules. The Cu(dcmbpy)Cl₂ complex belongs to the first type, whereas Ag(dcmbpy)NO₃ · H₂O belongs to the second type.     

3-exo,3′-exo-(1R,1′R)-Bithiocamphor — a versatile source for functionally different 3,3′-bibornane derivatives, II. 1 An access to 3-exo,3′-exo-(1r,1′r)-bicamphor and related compounds

3-exo,3′-exo-(1R,1′R)-bicamphor (12) is obtained from 3-exo,3′-exo-(1R,1′R)-bithtiocamphor (3) by condensation with hydrazine hydrate followed by hydrolysis of the resulting dihydropyridazine 11. Deprotonation of 12 with NaH and subsequent treatment with potassium hexacyanoferrate (III) furnishes the 2,2′-dioxo-3,3′-bibornanylidene 13, whilst reduction of 12 with L1AlH₄ affords the 3,3′-biisoborneol 16. Further related transformations to various 2,2′-difunctional 3,3′-bibornane derivatives are described, which are could be of interest as chiral ligands     

Magnetic susceptibility of 1,1′,2,2′-tetramethylcobaltocene and 1,1′-diethylcobaltocene: Evidence for the dynamic Jahn-Teller effect

The magnetic susceptibility of 1,1′,2,2′-tetramethylcobaltocene, Co[C₅H₃(CH₃)₂]₂, and 1,1′-diethylcobaltocene, Co(C₅H₄C₂H₅)₂, has been studied between 0.99 and 296 K. The data are well reproduced by a calculation of the dynamic Jahn-Teller effect for the ²E_1g(a_1g²e_2g⁴e_1g) ground state of D_5d symmetry. A suitable set of parameter values is given by ζ = 100 cm⁻¹, δ = 150 cm⁻¹, k_JT = 0.40, κ = 0.70. The magnetism of cobaltocene, Co(C₅H₅)₂, may be described by parameter values of comparable magnitude. The results imply a significantly larger reduction of the spin-orbit coupling parameter ζ due to covalency than of the orbital reduction factor κ.     

Synthesis of ansa-2,2′-bis[(4,7-dimethyl-inden-1-yl)methyl]-1,1′-binaphthyl and nsa-2,2′-bis[(4,5,6,7-tetrahydroinden1-yl)methyl]-1,1′-binaphthyltitanium and -zirconium dichlorides

2,2′-Bis[(4,7-dimethyl-inden-1-yl)methyl]-1,1′-binaphthyl and [2,2′-bis[(4,5,6,7-tetrahydroinden-1-yl)methyl]-1,1′-binaphthyl]titanium and -zirconium dichlorides have been synthesized from 2,2′-bis(bromomethyl)-1,1′-binaphthylene. 2,2′-Bis(bromomethyl)-1,1′-binaphthylene was alkylated with the lithium salt of 4,7-dimethylindene to yield 2,2′-bis[1-(4,7-dimethyl-indenylmethyl)]-1,1′-binaphthylene (S)-(−)-9. The lithium salt of 9 was metalated with either titanium trichloride followed by oxidation or zirconium tetrachloride to give titanocene dichloride (S)-(+)-10 and zirconocene dichloride 11. The known complexes ansa-[2,2′-bis[(1-indenyl)methyl]-1,1′-binaphthyl]titanium and -zirconium dichlorides were formed and hydrogenated to ansa-[2,2′-bis[(4,5,6,7-tetrahydroinden-1-yl)methyl]-1,1′-binaphthyl]titanium and -zirconium dichlorides 12 and 14 or to ansa-[2,2′-bis[(4,5,6,7-tetrahydroinden-1-yl)methyl]-5,5′,6,6′,7,7′,8,8′-octahydro-1,1′-binaphthyl]titanium dichloride 13 whose solid state structure was determined by X-ray crystallography. Complex 13 adopts a C₁-symmetrical conformation in the solid state, but is conformationally mobile in solution, exhibiting C₂-symmetry in its room temperature NMR spectra.     

H, C, N NMR, ESI mass spectral and single crystal X-ray structural characterization of three spiro[pyrrolidine-2,3′-oxindoles]

Three spiro[pyrrolidine-2,3′-oxindoles], 1,1′,2,2′,5′,6′,7′,7′a-octahydro-2-oxo-1′-phenyl-spiro[3H-indole-3,3′-[3H]-pyrrolizine]-2′-carboxylic acid methyl ester (1), 1,1′,2,2′,5′,6′,7′,7′a-octahydro-2-oxo-1′-nitro-2′-phenyl-spiro[3H-indole-3, 3′-[3H]-pyrrolizine] (2) and 1,1′,2,2′,5′,6′,7′,7′a-octahydro-2-oxo-1′-nitro-2′-(4″-chlorophenyl)-spiro[3H-indole-3,3′-[3H]-pyrrolizine] (3) have been synthesized and their ¹H, ¹³C and ¹⁵N spectra assigned. The chemical shift assignments are based on Pulsed Field Gradient (PFG) Double Quantum Filter (DQF) ¹H, ¹H correlation spectroscopy (COSY), PFG ¹H, ¹³C Heteronuclear Multiple Quantum Coherence (HMQC) and PFG ¹H,X (X = ¹³C and ¹⁵N) Heteronuclear Multiple Bond Correlation (HMBC) experiments. The single crystal X-ray structures of 1–3 have been determined. Compounds 1 and 2 crystallized in monoclinic space group C2/c and compound 3 in monoclinic space group P2₁/c, respectively. Also the ESI-TOF MS data of 1–3 are given.     

Investigation on lanthanide binuclear complexes of 1,5-bis-(1′-phenyl-3′-methyl-5′-pyrazolone-4′)-1,5-pentanedione and 2,2′-bipyridine

The coordination of 1,5-bis-(1′-phenyl-3′-methyl-5′-pyrazolone-4′)-1,5-pentanedione (BPMPPD) and 2,2′-bipyridine (bipy) with lanthanide ions in water-alcohol solution has been studied. Binuclear complexes of the types : Ln₂(BPMPPD)₃(bipy)₂·nH₂O (n = 2 for Y, n = 4 for Eu, Gd, Dy, Ho, Er, Tm and Yb); Ln₂(BPMPPD)₃bipy·nH₂O (n = 10 for La, n = 3 for Pr, Nd, Sm and Tb) were formed. The compounds were characterized by elemental analysis, molar conductance, IR, UV, ¹H NMR spectroscopy, thermogravimetric analysis and fluorescence spectra.     

Synthesis of 1,1′-methylenedi[(1R,1′R,3R,3′R,5R,5′R)-8-oxabicyclo[3.2.1]oct-6-en-3-ol] and derivatives: precursors of long-chain polyketides

Racemic 1,1′-methylene[(1RS,1′RS,3RS,3′RS,5RS,5′RS)-8-oxabicyclo[3.2.1]oct-6-en-3-ol] ((±)-6) derived from 2,2′-methylenedifuran has been resolved kinetically with Candida cyclindracea lipase-catalysed transesterification giving 1,1′-methylenedi[(1R,1′R,3R,3′R,5R,5′R)-8-oxabicyclo[3.2.1]oct-6-en-3-ol] (−)-6 (30% yield, 98% ee) and 1,1′-methylenedi[(1S,1′S,3S,3′S,5S,5′S)-8-oxabicyclo[3.2.1]oct-6-en-3-yl] diacetate (+)-8, (40% yield, 98% ee). These compounds have been converted into 1,1′-methylenedi[(4S,4′S,6S,6′S)- and (4R,4′R,6R,6′R)-cyclohept-1-en-4,6-diyl] derivatives.     

Chains, ladders and sheets of d metal–organic polymers generated from the flexible bipyridyl ligands

By use of the three-layer diffusion method, reactions of flexible bipyridyl ligands (4,4′-bpp or 3,3′-bpp) with M(II) salts (M = Zn, Cd) and multi-carboxylate ligands resulted in the formation of four interesting d¹⁰ metal–organic coordination polymers: [Zn(μ-4,4′-bpp)Br₂]_n (1), [Zn(μ-4,4′-bpp)(1,2-bdc)]_n · nH₂O (2), [Zn(μ-3,3′-bpp)(1,3-bdc)]_n · nCH₃OH · 2nH₂O (3) and [Cd(μ-3,3′-bpp)(C₄H₂O₄)]_n · 3nH₂O (4) (4,4′-bpp = 2,2′-bis(4-pyridylmethyleneoxy)-1,1′-biphenylene; 3,3′-bpp = 2,2 ′-bis(3-pyridylmethyleneoxy)-1,1′-biphenylene; bdc=benzenedicarboxylate, C₄H₄O₄ = fumaric acid). Complex 1 has a 2D sheet structure consisting of two unusual zigzag Zn(II) chains which are nearly perpendicular to each other. Complex 2 is comprised of two-leg ladders, in which [Zn(4,4′-bpp)] chains serve as the side rails and 1,2-bdc ligands serve as the cross rungs. In complex 3, every two 1,3-bdc ligands connect the neighbouring Zn(II)-3,3′-bpp dimetallic rings in η¹ coordination modes into an interesting chain structure. Complex 4 consists of an anionic macrocycle-containing cadmium dicarboxylate sheets that are separated by 3,3′-bpp. These d¹⁰ metal complexes exhibit high thermal stabilities and strong luminescence efficiencies.     

Facile synthesis of enantiopure 1,1′-binaphthyl-2,2′-dicarboxylic acid via lipase-catalyzed kinetic resolution

Enantiopure 1,1′-binaphthyl-2,2′-dicarboxylic acids (R)-1 and (S)-1 have been synthesized through the lipase-catalyzed kinetic resolution of the racemic 2,2-bis(hydroxymethyl)-1,1′-binaphthyl (±)-2 and subsequent oxidation of the hydroxymethyl groups.     

Synthesis and property of soluble poly(1,1′-dialkyl-3,3′-ferrocenylenevinylene)s via titanium-induced dicarbonyl-coupling reaction of 1,1′-dialkylferrocene-3,3′-dicarbaldehydes

1,1′-Dialkylferrocene-3,3′-dicarbaldehydes ( 1a–c ) with long alkyl chains such as ethyl, hexyl, and dodecyl groups were prepared in 13–25% yield via three-step reactions. The titanium-induced dicarbonyl-coupling reaction of 1a–c gave poly(1,1′-dialkyl-3,3′-ferrocenylenevi-nylene)s ( 2a–c ) in quantitative yields, which were the molecular weights of 3000–10,000 and highly soluble in chloroform, benzene, and hexane. The electrical conductivity and the third-order nonlinear optical susceptibility for poly(1,1′-dihexyl-3,3′-ferrocenylenevinylene) ( 2b ) were estimated to be 1 × 10^?2 S/cm on doping with iodine and 1–4 × 10^?12 esu at a wavelength of 1–2.4 μm, respectively. © 1995 John Wiley & Sons, Inc.     

The reactions of oxindoles and isatin with nitrobenzyl chlorides Formation of 2′-hydroxy-spiro[2H-indole-2,3′-3′H-indole]

Oxindole reacts with p-nitrobenzyl chloride ot give 3-(4′-nitrobenzyl) oxindole, but with o-nitrobenzyl chloride abnormal product, 2′-hydroxy-spiro[2H-indole-2,3′-3′H-indole] (Vb) is produced. The structure of Vb has been elucidated on the basis of the IR, UV and mass spectra, and confirmed by the analogous reactions of 3-methyl-, 4-methyl- and 3,3-dimethyloxindoles with o-nitrobenzyl chloride. Isatin reacts with o-nitrobenzyl chloride to give o-nitrobenzyloxireno[,3]-oxindole (X).     

Formation of hydrogen-bonded complexes of 3,3′,5,5′-tetrabromo-2,2′-biphenol with MTBD and triethylamine

The complexes of 3,3′,5,5′-tetrabromo-2,2′-biphenol (TBBPh) with 7-methyl-1,5,7-triazabicyclo[4.4.0]dec-5-ene (MTBD) and triethylamine (TEA) were studied by FTIR spectroscopy. In chloroform and in acetonitrile a proton transfer from TBBPh to N-bases (MTBD, TEA) occurs. In chloroform solution the protonated N-base molecules are hydrogen-bonded to the deprotonated TBBPh molecules, whereas in acetonitrile the complexes dissociate. The intra- as well as intermolecular hydrogen bonds within the chains show large proton polarizability.     

Oligodeoxynucleotide analogues containing 3′-deoxy-3′-C-threo-hydroxymethylthymidine: Synthesis, hybridization properties and enzymatic stability

Novel Oligodeoxynucleotide analogues containing 3′-C-threo-methylene phosphodiester internucleoside linkages were synthesized on automated DNA-synthesizers using the phosphoramidite approach. The sugar modified phosphoramidite building block 5 was obtained by phosphitylation of 1-(2,3-dideoxy-5-O-(4,4′-dimethoxytrityl)-3-C-hydroxymethyl-β-D-threo-pentofuranosyl)thymine (4) which was synthesized in only three steps from 5′-O-(4,4′-dimethoxytrityl)thymidine (1). The hybridization properties and enzymatic stability of the oligonucleotide analogues were studied by UV experiments. 17-Mers having one or three modifications in the middle or two modifications in each end hybridized to DNA with moderate lowered affinity compared to unmodified 17-mers (ΔT_m 1–3°C per modification). Furthermore, the end-modified and all-modified oligonucleotides were stable towards snake venom phosphodiesterase.     

Molecular structure of 4,4′-sulfandiyl-bis-thiophenol from electron diffraction

The molecular structure of 4,4′-sulfanidyl-bis-thiophenol (C₁₂H₁₀S₃) has been determined by gas electron diffraction. Assuming identical geometry and D_2h local symmetry for ---SC₆H₄S--- moieties, the following bond lengths (r_g) and bond angles were obtained: C---H = 1.101 ± 0.005, S---H = 1.388 ± 0.019, (C---C)_mean = 1.400 ± 0.003, (S---C)_mean = 1.778 ± 0.004 Å, C_ar---S---C_ar = 103.5 ± 1.3, C---C(S)---C = 120.4 ± 0.3, C(H)---C(H)---H = 119.1 ± 0.9 and C---S---H = 94.6 ± 3.1°. Two ratational forms were found to reproduce the experimental data, characterized by dihedral angles of the benzene rings with respect to the C_arSC_ar plane; ₁ = 67.8 ± 2.0°, ₂ = 4.5 ± 7.2°, and ₁ = 69.4 ± 2.0δ, ₂ = −26.6 ± 7.1°. Identical signs of ₁ and ₂ indicate that the two benzene rings are rotated in the same direction about the respective S_central---C axes.     

1′,3′,3′-Trimethyl-6-nitrospiro[2H-1-benzopyran-2,2′-indoline]: its thermal enantiomerization and the equilibration with its merocyanine

The enantiomers of the title compound, the important photochromic material (RS)-1b, have been enriched semipreparatively by liquid chromatography. As a consequence, we were able to determine the barrier of the thermal interconversion (R)-1b(S)-1b via time-dependent polarimetry, amounting to ΔG^≠=85.9 kJ/mol at 22.0°C in d⁶-DMSO (Table 2). The thermal equilibration of the corresponding merocyanine 2b was monitored in d⁶-DMSO by time-dependent ¹H NMR, resulting in ΔG₁^≠=102.8 and ΔG₂^≠=92.0 kJ/mol at 22°C (Table 1). This means that, starting from (RS)-1b, the opened isomer 2b is attained by a slow reaction (ΔG₁^≠=102.8 kJ/mol, Fig. 4). Therefore, the merocyanine 2b cannot be identified with the intermediate required for the fast process of C(sp³)–O bond cleavage (ΔG^≠=85.9 kJ/mol) upon the above enantiomerization of (RS)-1b. Apparently, these two thermal isomerizations (Fig. 4) are independent of each other. The structure of the unknown intermediate of the interconversion (R)-1b(S)-1b must therefore differ from the known one of merocyanine 2b.

Table 1. Equilibration between spiro compounds (RS)-1 and merocyanines 2 at 22°C, measured by time-dependent UV absorptions[3] for (RS)-1a2a and by time-dependent ¹H NMR intensities for the other compounds

Full-size table (8K)

Metal complexes of sterically hindered pyrzolylpyridines. The single crystal X-ray structure of [Cu(L)2]BF4 (L = 1-{pyrid-2-yl}-3-{2′,5′-dimethoxyphenyl}pyrazole)

Reaction of potassium 3{5}-(3′,4′-dimethoxyphenyl)pyrazolide with 2-bromopyridine in diglyme at 130°C for 3 days followed by an aqueous quench, affords 1-{pyrid-2-yl}-3-{3′,4′-dimethoxyphenyl}pyrazole (L²) in 69% yield after recrystallization from hot hexanes. Complexation of [Cu(NCMe)₄]BF₄ by 2 molar equivalents of 1-{pyrid-2-yl}-3-{2′,5′-dimethoxyphenyl}pyrazole (L¹) or L² in MeCN at room temperature, followed by concentration and crystallisation with Et₂O, gives [Cu(L)₂]BF₄ L = L¹, L²) in good yields. Treatment of AgBF₄ with L¹ or L² in MeNO₂ similarly gives [Ag(L)₂]BF₄ L = L¹, L²); reaction of AfBF₄ with L² in MeCN gives a product of stoichiometry [Ag(L²)(NCMe)]BF₄. The ¹H NMR spectra of the [M(L)₂]BF₄ complexes show peaks arising from a single coordinated environment. The single crystal X-ray structure of [Cu(L¹)₂]BF₄ shows a tetrahedral complex cation with Cu---N = 2.011(8), 2.036(8), 2.039(8), 2.110(8) Å. The Cu^I centre is close to tetrahedral, the dihedral angle between the least-squares planes formed by the Cu atom and the N donor atoms of the two ligands being 88.3(3)°. Complexation of hydrated Cu(BF₄)₂ by L² in MeCN at room temperature yields [Cu(L₂)₂](BF₄)₂. The cyclic voltammograms of the three Ag^I complexes in MeCN/0.1 M Bu₄ⁿ NPF₆ are suggestive of extensive ligand dissociation in this solvent.     

Molecular structure and electrochemical properties of the Pt complex of 1,1′-bis(methylthio)ferrocene and the Pd complexes of 1,4,7-trithia[7]- and 1,5,9-trithia[9] (1,1′)ferrocenophanes

Molecular structures of (triphenylphosphine) [1,1′-bis-(methylthio)ferrocene-S,S′,Fe]Pt(BF₄)₂ (1), (1,5,9-trithia[9]ferrocenophane-S,S′,S″,Fe)Pd(BF₄)₂ (2), and (acetonitrile)(1,4,7-trithia[7]ferrocenophane-S,S′,S″,Fe)Pd(BF₄)₂ (3) were determined by X-ray analyses. The Pt in 1 and the Pd atom in 2 have a somewhat distorted square-planar geometry including the Fe atom of the ferrocene moiety, while the Pd atom in 3 is coordinated by one equivalent of acetonitrile and takes a distorted tetragonal-pyramidal geometry. The distances of the Fe---M bond (M = Pd, Pt) in 1–3 are 2.851(2), 2.827(2), and 3.0962(8) Å, respectively. Cyclic voltammetry of 1–3 gave no reversible wave, but afforded some information supporting the presence of a dative bond.     

Synthesis, structure and nuclease activity of copper complexes of disubstituted 2,2′-bipyridine ligands bearing ammonium groups

A series of Cu(II) complexes of disubstituted 2,2′-bipyridine bearing ammonium groups [Cu(L¹⁻⁴)₂Br]⁵⁺ (1–4, L¹ = [5,5′-(Me₂NHCH₂)₂-bpy]²⁺, L² = [5,5′-(Me₃NCH₂)₂-bpy]²⁺, L³ = [4,4′-(Me₂NHCH₂)₂-bpy]²⁺, L⁴ = [4,4′-(Me₃NCH₂)₂-bpy]²⁺ and bpy = 2,2′-bipyridyl) were synthesized, of which complexes 1 and 4 were structurally characterized. Both coordination configurations of Cu(II) ions can be described as distorted trigonal bipyramid. The interaction between all complexes and CT-DNA was evaluated by thermal-denaturation experiments and CD spectroscopy. Results show that the complexes interact with CT-DNA via outside electrostatic interactions and their binding ability follows the order: 1 > 2 > 3 > 4. In the absence of any reducing agents, the cleavage of plasmid pBR322 DNA by these complexes was investigated and the hydrolysis kinetics of DNA was studied in Tris buffer (pH 7.5) at 37 °C. Obtained pseudo-Michaelis–Menten kinetic parameters: 15.0, 13.6, 2.01 and 1.69 h⁻¹ for 1, 2, 3 and 4, respectively, indicate that complexes 1 and 2 exhibit very high DNA cleavage activities. According to their crystal data, the high nuclease activity may be attributed to the strong interaction of the metal moiety and two ammonium groups with phosphate groups of DNA.     

The crystal structures of 2-(2′-pyridyl)phenyltellurium(II) bromide and of the inclusion compound bis[2-(2′-pyridyl)phenyltellurium(II) chloride]·p-ethoxyphenyl-mercury(II) chloride

In 2-(2′-pyridyl)phenyltellurium(II) bromide (1) the coordination about tellurium may be described as pseudo-trigonal bipyramidal wth bromine (Te---Br = 2.707(11) Å) and nitrogen (Te---N) = 2.236(11) Å) atoms occupying axial positions. The equatorial plane comprises a carbon atome (Te---C = 2.111(6) Å) and two lone pairs of electrons. There are no significant intermolecular interactions between the six independent molecules in the unit cell. Bis[2-2′-pyridyl)phenyltellurium(II) chloride]·p-ethoxy-phenylmercury(II) chloride (2) may be regarded as an “inclusion compound” obtained by replacement of two RTeX (X = Cl or Br) molecules by two p-ethoxyphenylmercury(II) chloride entities. There is approximately linear coordination about mercury (C---Hg---Cl = 179.2°(4), Hg-C = 2.044(14) and Hg---Cl = 2.328(4) Å) and 2-(2′-pyridyl)phenyltellurium(II) chloride, with a structure similar to that of (1) above (Te---N = 2.2366(6), Te---Cl = 2.558(1), Te---C = 2.080(25) Å). There are no significant intermolecular contacts.     

Model compounds of nylons—II : The crystal structure of N,N′-bis (β-chlorethyl)-glutaramide

The crystal structure of N,N′-bis(β-chloroethyl)-glutaramide (NNCEG) has been determined by X-ray diffraction analysis, as part of a research programme on simple model compounds for synthetic polyamides. It crystallizes in the monoclinic system, space group P2₁ Z = 2, with A = 4·941, B = 28·123, C = 4·835 Å and β = 113°53′. The structure was solved by the heavy atom method and refined to a final R value of 0·079. Each molecule forms hydrogen bonds along two directions (almost the a and the c directions with an angle close to 60°) giving rise to bidimensional layers (parallel to the ac plane with width b/2). A similar system of hydrogen bonds could be postulated for some nylons with odd number of CH₂'s between amide groups. The molecular conformation different from an all trans conformation is discussed in terms of the barriers to rotation around each bond considered by several authors. The twinning observed in most of the examined crystals is rationalized in terms of simple symmetry operations on molecular conformations of opposite chirality.