Synthesis,structure, DNA interaction,and hydrolytic function toward bis(<Emphasis Type="Italic">p</Emphasis>-nitrophenyl) phosphate of a heterobinuclear macrocyclic complex

An asymmetrical bis-pyridine pendant-armed macrocyclic heterobinuclear complex, [ZnNiL](ClO₄)₂·CH₃CN (H₂L was derived from the condensation between 3,3′-((ethane-1,2-diylbis((pyridin-2-ylmethyl)azanediyl))bis(methylene))bis(2-hydroxy-5-methylbenzaldehyde) and 1.3-diaminopropane), has been synthesized and characterized by physico-chemical and spectroscopic methods. The asymmetric unit contains two complete macrocyclic complexes that are nevertheless quite similar to one another. The Zn–Ni separations, bridged by the two phenoxides, are 3.107 and 3.141 Ǻ, respectively. The phosphate hydrolysis catalyzed by the complex was investigated using bis(4-nitrophenyl)phosphate (BNPP) as the substrate. The catalytic rate constant (k _cat) is 1.64 × 10⁻³ s⁻¹ at pH 7.4 and 25 °C, which is 10⁸-fold higher than that of the corresponding uncatalyzed reaction. The interaction between the complex and calf thymus (CT) DNA was investigated by UV–vis absorption, viscosity experiments, and cyclic voltammetry. The complex shows good binding propensity to calf thymus DNA via intercalation with a binding constant of 5 × 10⁴ M⁻¹. The agarose gel electrophoresis studies show that the complex has a concentration-dependent DNA cleavage activity.     

Studies on <Emphasis Type="Italic">p</Emphasis>-nitrophenyl picolinate cleavage by mono-Schiff base complexes with aza-crown ether or morpholino pendants

Abstract  Mono-Schiff base manganese(III) and cobalt(II) complexes with either benzo-10-aza-crown ether pendants (MnL¹ ₂ Cl, CoL¹ ₂) or morpholino pendants (MnL² ₂Cl, CoL² ₂) have been employed as models for hydrolase enzymes by studying the kinetics of their hydrolysis reactions with p-nitrophenyl picolinate (PNPP). A kinetic model of PNPP cleavage catalyzed by these complexes is proposed. The effects of complex structures and reaction temperature on the rate of catalytic PNPP hydrolysis have been also examined. The rate increases with pH of the buffer solution; all four complexes exhibited high activity in the catalytic PNPP hydrolysis. Compared with the crown-free analogues MnL² ₂Cl and CoL² ₂, the crowned Schiff base complexes (MnL¹ ₂Cl, CoL¹ ₂) exhibit higher catalytic activity. The pseudo-first-order-rate ( k _obs ) for the PNPP hydrolysis catalyzed by the complex MnL¹ ₂Cl containing benzo-10-aza-crown ether is 1.06 × 10³ times that of spontaneous hydrolysis of PNPP at pH = 7.00, 25 °C, [S] = 2.0 × 10⁻⁴ mol dm⁻³. Graphical Abstract   Studies on p-nitrophenyl picolinate cleavage by mono-Schiff base complexes with aza-crown ether or morpholino pendants Jian-zhang Li*, Fa-mei Feng, Bin Xu,Wei-dong Jiang Key Laboratory of Green and Technology, Department of Chemistry, Sichuan University of Science & Engineering, Zigong, Sichuan, 643000, P.R. China Sheng-ying Qin Department of Chemistry, Sichuan University, Chengdu, Sichuan, 610064, P.R. China Mono-Schiff base manganese(III) and cobalt(II) complexes with either benzo-10-aza-crown ether pendants (MnL¹ ₂Cl, CoL¹ ₂) or morpholino pendants (MnL² ₂Cl, CoL² ₂) have been employed as models for hydrolase enzymes by studying the kinetics of their hydrolysis reactions with PNPP. A kinetic model of PNPP cleavage catalyzed by these complexes is proposed. Compared with the crown-free analogy MnL² ₂Cl and CoL² ₂, the crowned Schiff base complexes (MnL¹ ₂Cl, CoL¹ ₂) exhibit higher catalytic activity.      

Photolysis of <Emphasis Type="Italic">p</Emphasis>-benzoquinone and <Emphasis Type="Italic">p</Emphasis>-chloranil in aqueous sodium sulfite solution

Photosubstitution of the sulfo group for hydrogen (chlorine in chloranil) is observed under irradiation of sulfonated derivatives of hydroquinone formed upon dissolving of p-benzoquinone and p-chloranil in aqueous solutions of sodium sulfite. The quantum yield of the photochemical reaction is 0.18 ± 0.02 for p-benzoquinone. The rate constant of the thermal reaction of substitution is 5.5 × 10⁻⁴ l mol⁻¹ s⁻¹. The substitution reaction is sensitized by eosin upon irradiation with visible light. During the course of irradiation of sulfohydroquinones, the formation of a product with an absorption maximum at 235 nm was found. The product decays with a rate constant of 0.005 s⁻¹.     

Mechanistic aspects of ligand substitution on <Emphasis Type="Italic">cis</Emphasis>-diaqua(<Emphasis Type="Italic">cis</Emphasis>-1,2-diaminocyclohexane)platinum(II) by Glycine-<Emphasis Type="SmallCaps">l</Emphasis>-Leucine

The kinetics of the interaction of glycine-l-leucine (Glyleu) with cis-[Pt(cis-dach)(OH₂)₂]²⁺ (dach = 1,2-diaminocyclohexane) has been studied spectrophotometrically as a function of [cis-[Pt(cis-dach)(OH₂)₂]²⁺], [Glyleu] and temperature at pH 4.0, where the complex exists predominantly as the diaqua species and Glyleu as a zwitterion. The substitution reaction shows two consecutive steps: the first is the ligand-assisted anation and the second is the chelation step. The activation parameters for both the steps were evaluated using Eyring’s equation. The low ∆H₁^≠ (51.9 ± 2.8 kJmol⁻¹) and large negative value of ∆S₁^≠ (−152 ± 8 JK⁻¹mol⁻¹) as well as ∆H₂^≠ (54.4 ± 1.7 kJmol⁻¹) and ∆S₂^≠ (−162 ± 5 JK⁻¹mol⁻¹) indicate an associative mode of activation for both the aqua ligand substitution processes.     

Characterization of a Thermostable Family 1 Glycosyl Hydrolase Enzyme from <Emphasis Type="Italic">Putranjiva roxburghii</Emphasis> Seeds

A 66-kDa thermostable family 1 Glycosyl Hydrolase (GH1) enzyme with β-glucosidase and β-galactosidase activities was purified to homogeneity from the seeds of Putranjiva roxburghii belonging to Euphorbiaceae family. N-terminal and partial internal amino acid sequences showed significant resemblance to plant GH1 enzymes. Kinetic studies showed that enzyme hydrolyzed p-nitrophenyl β-d-glucopyranoside (pNP-Glc) with higher efficiency (K _cat/K _m = 2.27 × 10⁴ M⁻¹ s⁻¹) as compared to p-nitrophenyl β-d-galactopyranoside (pNP-Gal; K _cat/K _m = 1.15 × 10⁴ M⁻¹ s⁻¹). The optimum pH for β-galactosidase activity was 4.8 and 4.4 in citrate phosphate and acetate buffers respectively, while for β-glucosidase it was 4.6 in both buffers. The activation energy was found to be 10.6 kcal/mol in the temperature range 30–65 °C. The enzyme showed maximum activity at 65 °C with half life of ~40 min and first-order rate constant of 0.0172 min⁻¹. Far-UV CD spectra of enzyme exhibited α, β pattern at room temperature at pH 8.0. This thermostable enzyme with dual specificity and higher catalytic efficiency can be utilized for different commercial applications.     

Electrochemical determination of <Emphasis Type="Italic">p</Emphasis>-cresol using mesoporous TiO<Subscript>2</Subscript>-modified carbon paste electrode

A mesoporous TiO₂ (meso-TiO₂) was synthesized, and used to prepare modified carbon paste electrode (CPE). The electrochemical sensing properties were characterized using K₃[Fe(CN)₆], showing that meso-TiO₂ modified CPE possesses larger surface area and higher electron transfer rate. The electrochemical behavior of p-cresol was investigated. At the meso-TiO₂ modified CPE, the oxidation peak current of p-cresol remarkably increases, and the oxidation peak potential shifts negatively, suggesting that meso- TiO₂ exhibits highly efficient catalytic activity to the oxidation of p-cresol. Based on this, a sensitive, rapid and convenient electrochemical method was developed for the detection of p-cresol. The linear range is from 1.5 × 10⁻⁷ and 2.0 × 10⁻⁵ mol l⁻¹, and the limit of detection is as low as 8.0 × 10⁻⁸ mol l⁻¹. Finally, the new method was successfully used to determine p-cresol in water samples.     

Catalytic and Thermodynamic Characterization of Endoglucanase (CMCase) from <Emphasis Type="Italic">Aspergillus oryzae</Emphasis> cmc-1

Monomeric extracellular endoglucanase (25 kDa) of transgenic koji (Aspergillus oryzae cmc-1) produced under submerged growth condition (7.5 U mg⁻¹ protein) was purified to homogeneity level by ammonium sulfate precipitation and various column chromatography on fast protein liquid chromatography system. Activation energy for carboxymethylcellulose (CMC) hydrolysis was 3.32 kJ mol⁻¹ at optimum temperature (55 °C), and its temperature quotient (Q ₁₀) was 1.0. The enzyme was stable over a pH range of 4.1–5.3 and gave maximum activity at pH 4.4. V _max for CMC hydrolysis was 854 U mg⁻¹ protein and K _m was 20 mg CMC ml⁻¹. The turnover (k _cat) was 356 s⁻¹. The pK _a1 and pK _a2 of ionisable groups of active site controlling V _max were 3.9 and 6.25, respectively. Thermodynamic parameters for CMC hydrolysis were as follows: ΔH* = 0.59 kJ mol⁻¹, ΔG* = 64.57 kJ mol⁻¹ and ΔS* = −195.05 J mol⁻¹ K⁻¹, respectively. Activation energy for irreversible inactivation ‘E _a(d)’ of the endoglucanase was 378 kJ mol⁻¹, whereas enthalpy (ΔH*), Gibbs free energy (ΔG*) and entropy (ΔS*) of activation at 44 °C were 375.36 kJ mol⁻¹, 111.36 kJ mol⁻¹ and 833.06 J mol⁻¹ K⁻¹, respectively.     

Mononuclear Rare Earth Metal Complexes based on 1,10-phenanthroline Derivatives as Catalysts for Hydrolysis of p-nitrophenyl Phosphate (NPP)

Two multidentate ligands: N,N′-di-(propionic acid-2′-yl-)-2,9-diaminomethyl-1,10-phenanthroline (L1) and N,N′-di-(3′-methylbutyric acid-2′-yl-)-2,9-diaminomethyl-1,10-phenanthroline (L2) were synthesized. The hydrolytic kinetics of p-nitrophenyl phosphate (NPP) catalyzed by complexes of L1 and L2 with La(III), Gd(III) have been studied. Both LnL and LnLH₋₁ have been examined as catalysis for the hydrolysis of NPP in aqueous solution at 298 K, I = 0.10 mol dm⁻³ KNO₃ at the pH range 7.4–9.1, respectively. Kinetic studies show that both LnL and LnLH₋₁ have catalytic activity, but LnLH₋₁ is more active than LnL in the hydrolysis of NPP. The second-order rate constants for the hydrolysis of NPP are k_GdL1H−1 = 0.01399 mol⁻¹ dm³ s⁻¹, k_GdL1 = 0.0000110 mol⁻¹ dm³ s⁻¹ for complexes GdL1H₋₁ and GdL1, respectively. A new mechanism was proposed for the hydrolysis of NPP catalyzed by LnL and LnLH₋₁.     

Thermodynamic characteristics of the complexation between Pb<Superscript>2+</Superscript> and <Emphasis Type="Italic">N</Emphasis>,<Emphasis Type="Italic">N</Emphasis>-Bis(carboxymethyl)aspartic acid in aqueous solution

The enthalpies of complexation between N,N-bis(carboxymethyl)aspartic acid (H₄Y) and the Pb²⁺ ion at 298.15 K were determined from calorimetric data for a wide range of the ionic strengths (KNO₃). The thermodynamic characteristics ΔH, ΔG, and ΔS, of formation of the complexes PbHY⁻ and PbY²⁻ were calculated for zero and fixed ionic strengths. The results obtained were interpreted.     

New boron-containing bacteriochlorin <Emphasis Type="Italic">p</Emphasis> cycloimide conjugate

A conjugate of the bacteriochlorophyll a derivative with the cobalt bis(dicarbollide) anion [3,3′-Co(1,2-C₂B₉H₁₁)₂]⁻ was synthesized.     

Hydrogels of starch-g-(<Emphasis Type="Italic">tert</Emphasis>-butylacrylate) and starch-g-(<Emphasis Type="Italic">n</Emphasis>-butylacrylate) copolymers

The synthesis, characterization, and hydrogel properties of starch-g-(tert-butylacrylate) and starch-g-(n-butylacrylate) copolymers were studied. The optimum conditions for the grafting process of tert-butylacrylate into 1.0 g of starch were as follows: [tert-butylacrylate] = 0.04 mol/L, [CAN] = 9.0 × 10⁻⁴ mol/L, temperature = 20 °C in 100 mL solution, whereas the results using n-butylacrylate monomer were as follows: [n-butylacrylate] = 0.04 mol/L, [CAN] = 4.0 × 10⁻³ mol/L, temperature = 30 °C in 100 mL solution. The grafting evidences of monomers into starch were done through TG and its derivative DTG for thermal changes and mass losses, scanning electron microscope (SEM) for morphological changes, powder X-ray for crystallinity measurements and FTIR for functional group changes. Acid hydrolysis method was used efficiently to allow the calculations of the viscosity average molecular weight (M _v) of the grafted chains on starch and consequently the real percent of grafting efficiency (i.e. %GY). The capability of starch-g-(n-BAC) hydrogel to absorb water were found 10 times more than starch-g-(tert-BAC) hydrogel, which were clarified through the X-ray and SEM results.     

Synthesis and properties of <Emphasis Type="Italic">N</Emphasis>-nitro-<Emphasis Type="Italic">O</Emphasis>-(4-nitrophenyl)hydroxylamine

Salts of N-nitro-O-(4-nitrophenyl)hydroxylamine were synthesized by a new method of oxidative nitration, involving the reaction of O-(4-nitrophenyl)hydroxylamine with KNO₂ or NaNO₂ in the presence of PhI(OAc)₂ or PhIO as oxidants. When using Na¹⁵NO₂, the samples containing the nitro group labeled with the ¹⁵N isotope were obtained. Acidification of the appropriate salt gave N-nitro-O-(4-nitrophenyl)hydroxylamine. It is the first N-nitrohydroxylamine isolated in the H-form. Its thermal stability was investigated and the probable mechanism of decomposition was suggested. From a comparison of the ¹⁴N and ¹⁵N NMR spectra of N-nitro-O-(4-nitrophenyl)hydroxylamine with those of its O- and N-methylated derivatives, its equilibrium with the aci-form (N=NOOH) was inferred.     

Regioselective Reaction of <Emphasis Type="Italic">N</Emphasis><Superscript>1</Superscript>-Benzyl-<Emphasis Type="Italic">N</Emphasis><Superscript>2</Superscript>-(4-nitrophenyl)ethanediamide and Acetylenic Esters

Summary. The regioselective reaction of N¹-benzyl-N²-(4-nitrophenyl)ethanediamide with dialkyl acetylenedicarboxylates or alkyl propiolates in the presence of triphenylphosphine leads to dialkyl 4-benzylamino-1-(4-nitrophenyl)-5-oxo-2,5-dihydro-1H-pyrrole-2,3-dicarboxylates or alkyl 4-benzylamino-1-(4-nitrophenyl)-2-oxo-5-pyrrolidinecarboxylates in good yields.     

Low-temperature thermodynamic properties of <Emphasis Type="Italic">L</Emphasis>-cysteine

Heat capacity C _p(T) of the orthorhombic polymorph of L-cysteine was measured in the temperature range 6–300 K by adiabatic calorimetry; thermodynamic functions were calculated based on these measurements. At 298.15 K the values of heat capacity, C _p; entropy, S _m⁰(T)-S _m⁰(0); difference in the enthalpy, H _m⁰(T)-H _m⁰(0), are equal, respectively, to 144.6±0.3 J K⁻¹ mol⁻¹, 169.0±0.4 J K⁻¹ mol⁻¹ and 24960±50 J mol⁻¹. An anomaly of heat capacity near 70 K was registered as a small, 3–5% height, diffuse ‘jump’ accompanied by the substantial increase in the thermal relaxation time. The shape of the anomaly is sensitive to thermal pre-history of the sample.     

4<Emphasis Type="Italic">p</Emphasis><Superscript>2</Superscript> resonances in photoionization from 4<Emphasis Type="Italic">s</Emphasis>4<Emphasis Type="Italic">p</Emphasis> levels in neutral zinc

In neutral zinc the 4p ² configuration lies above the 3d ¹⁰4s ionization limit and its levels become perturbers in the continuum. Lines have been identified in the Zn I spectrum for the multiplet, whereas no lines have been found for transitions to 4p ^{2 1} D or ¹ S. In this paper, cross sections for photoionization from 4s4p levels are reported that reveal the positions and widths of the 4p ² resonances. Calculations were performed using the multiconfiguration Hartree-Fock (MCHF) and B-spline R-matrix (BSR) method. Results from Breit–Pauli calculations that ignore the background continua are also presented. Included in the latter are energies for the levels and transition data (transition energies, line strengths, f-values, and A-rates) for all E1 transitions between these levels. Transition energies and the agreement in the length and velocity values, particularly for allowed transitions, indicate the accuracy of the computational model. Line widths are compared with other estimates. Contribution to the Serafin Fraga Memorial Issue.     

Isolation and Characterization of a Novel Thermophilic-Organic Solvent Stable Lipase From <Emphasis Type="Italic">Acinetobacter baylyi</Emphasis>

The benzene tolerant Acinetobacter baylyi isolated from marine sludge in Angsila, Thailand could constitutively secrete lipolytic enzymes. The enzyme was successfully purified 21.89-fold to homogeneity by ammonium sulfate precipitation and gel-permeable column chromatography with a relative molecular mass as 30 kDa. The enzyme expressed maximum activity at 60°C and pH 8.0 with p-nitrophenyl palmitate as a substrate and found to be stable in pH and temperature ranging from 6.0-9.0 to 60-80°C, respectively. A study on solvent stability revealed that the enzyme was highly resisted to many organic solvents especially benzene and isoamyl alcohol, but 40% inhibited by decane, hexane, acetonitrile, and short-chain alcohols. Lipase activity was completely inhibited in the presence of Fe²⁺, Mn²⁺, EDTA, SDS, and Triton X-100 while it was suffered detrimentally by Tween 80. The activity was enhanced by phenylmethylsulfonyl fluoride (PMSF), Na⁺, and Mg²⁺ and no significant effect was found in the presence of Ca²⁺ and Li⁺. Half of an activity was retained by Ba²⁺, Ag⁺, Hg⁺, Ni²⁺, Zn²⁺, and DTT. The enzyme could hydrolyze a wide range of p-nitrophenyl esters, but preferentially medium length acyl chains (C₈-C₁₂). Among natural oils and fats, the enzyme 11-folds favorably catalyzed the hydrolysis of rice bran oil, corn oil, sesame oil, and coconut oil in comparison to palm oil. Moreover, the transesterification activity of palm oil to fatty acid methyl esters (FAMEs) revealed 31.64 ± 1.58% after 48 h. The characteristics of novel A. baylyi lipase, as high temperature stability, organic solvent tolerance, and transesterification capacity from palm oil to FAMEs, indicate that it could be a vigorous biocatalyzer in the prospective fields as bioenergy industry or even in organic synthesis and pharmaceutical industry.     

Curing reaction of <Emphasis Type="Italic">o</Emphasis>-cresol-formaldehyde epoxy/LC epoxy(<Emphasis Type="Italic">p</Emphasis>-PEPB)/anhydride(MeTHPA)

The curing kinetics of a bi-component system about o-cresol-formaldehyde epoxy resin (o-CFER) modified by liquid crystalline p-phenylene di[4-(2,3-epoxypropyl) benzoate] (p-PEPB), with 3-methyl-tetrahydrophthalic anhydride (MeTHPA) as a curing agent, were studied by non-isothermal differential scanning calorimetry (DSC) method. The relationship between apparent activation energy E _a and the conversion α was obtained by the isoconversional method of Ozawa. The reaction molecular mechanism was proposed. The results show that the values of E _a in the initial stage are higher than other time, and E _a tend to decrease slightly with the reaction processing. There is a phase separation in the cure process with LC phase formation. These curing reactions can be described by the Šesták–Berggren (S–B) equation, the kinetic equation of cure reaction as follows: \frac\textda\textdt = Aexp( - \fracE_\texta RT )a^m ( 1 - a )ⁿ {\frac{{{\text{d}}\alpha }}{{{\text{d}}t}}} = A\exp \left( { - {\frac{{E_{\text{a}} }}{RT}}} \right)\alpha^{m} \left( {1 - a} \right)^{n} .     

Role of mononuclear rare earth metal complexes in promoting the hydrolysis of p-nitrophenyl phosphate (NPP)

Two long-chain multidentate ligands: 2,9-di-(n-2′,5′,8′-triazanonyl)-1,10-phenanthroline (L₁) and 2,9-di-(n-4′,7′,10′-triazaundecyl)-1,10-phenanthroline (L₂) were synthesized. The hydrolytic kinetics of p-nitrophenyl phosphate (NPP) catalyzed by complexes of L₁ and L₂ with La(III) and Gd(III) have been studied in aqueous solution at 298 K, I = 0.10 mol · dm⁻³ KNO₃ at pH 7.5–9.1, respectively. The study shows that the catalytic effect of GdL1 was the best in the four complexes for hydrolysis of NPP. Its k_LnLH−1, k _LnL and pK _a are 0.0127 mol⁻¹ dm³ s⁻¹, 0.000022 mol⁻¹ dm³ s⁻¹ and 8.90, respectively. This paper expounds the result from the structure of the ligands and the properties of the metal ions, and deduces the catalysis mechanism.