光谱法及分子模拟研究芹菜素与人血清白蛋白的相互作用

利用紫外光谱、荧光光谱、红外光谱、圆二色光谱及分子模型等技术,在生理pH条件下,研究了芹菜素与人血清白蛋白的相互作用,计算了结合常数和热力学参数。分子模型研究表明,芹菜素与人血清白蛋白在亚结构域ⅡA结合,二者间的主要作用为疏水作用和静电作用,这与荧光光谱所得结果基本一致。红外光谱、圆二色光谱及同步荧光光谱均显示芹菜素与人血清白蛋白结合后没有改变人血清白蛋白的二级结构。     

腺苷与人血清白蛋白间相互作用的荧光光谱及分子模型法研究

在模拟人体生理条件下,结合紫外光谱和分子对接模型运用荧光光谱研究了腺苷与人血清白蛋白(HSA)间的键合作用。腺苷有较强的能力猝灭人血清白蛋白的内源荧光,且根据Stern-Volmer方程判断出猝灭机制为静态猝灭。本文运用相应的荧光值和Vant’Hoff热力学方程求得了不同温度下的结合常数(K)以及一些热力学参数,如焓变(ΔH)和熵变(ΔS)。结果表明：键合过程中疏水作用力对新化合物的稳定性起主要作用,这与分子对接模型方法研究的结果基本一致。另外还研究了常见离子对结合常数的影响。     

多溴联苯醚与人血清白蛋白相互作用的表面等离子体共振及分子对接

采用表面等离子体共振(SPR)技术,在模拟生理条件下实时动态研究了8种典型多溴联苯醚(PBDEs)与人血清白蛋白(HSA)相互作用的动力学和热力学行为.通过分子对接模拟研究了PBDEs与HSA相互作用的分子机制,探讨了不同PBDEs与蛋白的结合模式及作用力.动力学实验结果表明, PBDEs中溴原子的个数和取代位置对相互作用有规律性的影响.溴原子通过改变PBDEs分子与HSA作用过程中的解离速率来影响其亲和力,溴原子个数越多, PBDEs与HSA作用的亲和力越强;而取代基位置则影响PBDEs与HSA作用结合速率的快慢,同分异构体中间位取代溴的亲和力大于邻位取代溴.分子对接结果显示, 8种PBDEs主要结合于HSA的Site I位点,但结合位点周边氨基酸残基类型的差异影响了结合力.范德华力和氢键对结合能的贡献远大于静电力.     

全氟丙酸与人血清白蛋白结合作用机制的计算模拟与光谱法研究

通过分子对接和动力学模拟的计算方法模拟人血清白蛋白(HSA)的三维空间结构,建立了HSA与全氟丙酸(IPC-PFFA-3)相互作用的模型,研究了HSA与全氟丙酸复合物在水溶液中的稳定性以及在结合位点中的动力学性质。在模拟人体生理的实验条件下,采用荧光光谱法和同步荧光光谱法研究了HSA与IPCPFFA-3的相互作用。实验结果表明,IPC-PFFA-3与HSA形成的复合物HSA-IPC-PFFA-3对HSA产生荧光猝灭作用,其猝灭机理是静态猝灭;热力学参数计算得出两者结合的主要作用力为氢键作用力;竞争实验的结果表明IPC-PFFA-3与HSA的结合位点位于HSA的SiteⅡ,与分子对接的模拟结果相吻合。同步荧光光谱实验与动力学模拟的结果证明IPC-PFFA-3与HSA能够稳定结合,并使HSA的构象发生变化。     

Spectroscopic and Molecular Docking Approaches for Investigation of Interaction of Phellopterin with Human Serum Albumin

The mechanism of interaction between human serum albumin (HSA) and natural product phellopterin (PL) from Angelica dahurica was investigated by spectroscopic techniques with molecular docking under simulated physiological conditions. The experimental results showed that the fluorescence of HSA was regularly quenched by PL, and the quenching constants (K_SV) decreased with increasing temperature, which indicated that the quenching mechanism was a static quenching procedure. The binding constants (K_A) were larger than 10^?5 M^?1 and the number of binding sites (n) was approximate to 1 at different temperatures, which indicated that the binding affinity was hige and there was just one main binding site in HSA for PL. According to thermodynamic parameters from Van't Hoff equation, the binding process of PL with HSA was spontaneous and exothermic process due to ΔG < 0, and the electrostatic force played major role in the binding between PL and HSA according to ΔH < 0 and ΔS > 0. The binding distance (r) was calculated to be about 3.35 nm, which implied that the energy transfer from HSA to PL occurred with high possibility according to the theory of Förster's non-radiation energy transfer. The microenvironment and conformation of HSA changed with the addition of PL based on the results of synchronous and three-dimensional fluorescence methods. The molecular docking analysis revealed the binding locus of PL to HSA in subdomain IIIA (Sudlow's site II).     

荧光光谱法研究双醋瑞因与人血清白蛋白的相互作用

在模拟人体生理条件下（pH=7.40）,采用荧光光谱法研究双醋瑞因与人血清白蛋白的相互作用。 采用2种方法计算不同温度下其结合常数KA、结合位点数n,同时对2种计算方法进行了比较;并根据热力学参数确定了双醋瑞因与人血清白蛋白之间的作用力类型。 根据Forster非辐射能量转移原理,确定了双醋瑞因与人血清白蛋白相互结合时供能体 受能体间的作用距离和能量转移效率,并用同步荧光光谱研究了双醋瑞因对人血清白蛋白构象的影响。 结果表明,双醋瑞因与人血清白蛋白之间主要是以静态猝灭为主;结合距离r=2.88 nm,能量转移效率E=0.273 8,二者主要凭借氢键和范德华力进行结合。     

光谱法联合分子对接研究人血清白蛋白与新的抗肿瘤活性小分子的体外结合

前期研究中合成了全新的以4-苯氧基喹啉环为母核结构的,具有较好抗肿瘤活性的TypeⅡ型小分子c-Met激酶抑制剂:N-[3-氟-4-[6-甲氧基-7-[3-(4-甲基-1-哌嗪基)丙氧基]喹啉-4-氧基]苯基]-1-(2-氟苯基)-4-甲基-5-氧代-4,5-二氢-1H-1,2,4-三氮唑-3-甲酰胺(LJC-116)。该文进一步通过荧光、同步荧光、三维荧光、紫外-可见吸收等光谱方法联合分子对接技术研究了在模拟生理条件下,LJC-116与人血清白蛋白(HSA)的结合作用。研究表明LJC-116通过静态结合作用猝灭HSA的荧光,此静态作用方式同时被三维荧光以及紫外可见吸收光谱确证。在288、299、310 K温度下,计算LJC-116与HSA的表观结合常数的数量级均为104L·mol-1,说明两者的结合是中等强度。热力学常数ΔG°为负值,表明两者的结合是自发的。此外,ΔS°为正值,同时ΔH°为负值表明疏水作用和氢键是形成HSA-LJC-116(1∶11)复合物的主要驱动力。在实验条件下,通过F9rster偶极-偶极非辐射能量转移理论计算重叠积分J=7.169 7×10-15cm3·L·mol-1,R=1.28 nm,r=1.69 nm,E=15.6%。表明能量转移效率很高。位点探针试剂华法林和布洛芬的加入实验表明LJC-116与HSA结合部位处于HSA的疏水腔亚结构域ⅡA(siteⅠ)中。两者结合引起HSA的以下变化:内源性荧光猝灭、同步荧光红移0.4 nm,三维荧光光谱红移2 nm,HSA紫外吸收光谱改变以及HSA氨基酸残基微环境极性增加、疏水性下降。最后,利用分子对接对热力学计算得到的作用力和光谱方法中探讨的HSA构象变化进行了验证。该文全面阐述了两者在分子水平的作用机制,为TypeⅡ型小分子cMet激酶抑制剂的体内转运情况提供了有用的信息。     

黄芩苷与人血清白蛋白的相互作用研究

利用紫外光谱、荧光光谱、傅立叶红外谱、圆二色谱及分子模型等技术,在生理pH条件下,研究了黄芩苷与人血清白蛋白(HSA)的相互作用,并计算了其结合常数和热力学参数.分子模型研究表明,黄芩苷与HSA在亚结构域ⅡA结合,二者间的作用主要为静电作用和疏水作用,与荧光光谱结果基本一致.红外光谱和圆二色谱显示黄芩苷与HSA结合后未...     

The Interaction Between Crystal Violet and Bovine Serum Albumin: Spectroscopic and Molecular Docking Investigations

The present work reported the investigations on the interaction between a triphenylmethane industrial dye—crystal violet (CV)—and bovine serum albumin (BSA) by spectroscopic methods and molecular docking calculation. The static quenching mechanism of the intrinsic fluorescence of BSA by CV was deduced by the fluorescence measurements and the ground-state complex formation was confirmed from the UV-vis spectra. The site maker competition binding experiments together with the molecular docking showed that the CV molecule specifically bound on the subdomain IIA of BSA. The obtained values of thermodynamic properties of binding suggested that the hydrophobic interaction was dominated as suggested by molecular docking results that the CV molecule was surrounded by hydrophobic amino acid residues. The conformation change of BSA in the binding process was detected by circular dichroism spectra and Fourier-transform infrared (FTIR) spectra and also reflected by the size change of BSA from the measurements by dynamic light scattering (DLS).     

Molecular Insight into the Binding of Astilbin with Human Serum Albumin and Its Effect on Antioxidant Characteristics of Astilbin

Astilbin is a dihydroflavonol glycoside identified in many natural plants and functional food with promising biological activities which is used as an antioxidant in the pharmaceutical and food fields. This work investigated the interaction between astilbin and human serum albumin (HSA) and their effects on the antioxidant activity of astilbin by multi-spectroscopic and molecular modeling studies. The experimental results show that astilbin quenches the fluorescence emission of HSA through a static quenching mechanism. Astilbin and HSA prefer to bind at the Site Ⅰ position, which is mainly maintained by electrostatic force, hydrophobic and hydrogen bonding interactions. Multi-spectroscopic and MD results indicate that the secondary structure of HSA could be changed because of the interaction of astilbin with HSA. DPPH radical scavenging assay shows that the presence of HSA reduces the antioxidant capacity of astilbin. The explication of astilbin–HSA binding mechanism will provide insights into clinical use and resource development of astilbin in food and pharmaceutical industries.     

A Comprehensive Investigation of Interactions between Antipsychotic Drug Quetiapine and Human Serum Albumin Using Multi-Spectroscopic,Biochemical, and Molecular Modeling Approaches

Quetiapine (QTP) is a short-acting atypical antipsychotic drug that treats schizophrenia or manic episodes of bipolar disorder. Human serum albumin (HSA) is an essential transport protein that transports hormones and various other ligands to their intended site of action. The interactions of QTP with HSA and their binding mechanism in the HSA-QTP system was studied using spectroscopic and molecular docking techniques. The UV-Vis absorption study shows hyperchromicity in the spectra of HSA on the addition of QTP, suggesting the complex formation and interactions between QTP and HSA. The results of intrinsic fluorescence indicate that QTP quenched the fluorescence of HSA and confirmed the complex formation between HSA and QTP, and this quenching mechanism was a static one. Thermodynamic analysis of the HSA-QTP system confirms the involvement of hydrophobic forces, and this complex formation is spontaneous. The competitive displacement and molecular docking experiments demonstrated that QTP is preferentially bound to HSA subdomain IB. Furthermore, the CD experiment results showed conformational changes in the HSA-QTP system. Besides this, the addition of QTP does not affect the esterase-like activity of HSA. This study will help further understand the credible mechanism of transport and delivery of QTP via HSA and design new QTP-based derivatives with greater efficacy.     

两种组氨酸酰胺衍生物的合成及其与人血清白蛋白的结合

L-组氨酸对生物有机体有着良好的亲和能力,通过修饰其化学结构以期寻找药理活性和生物利用度高的衍生物。本文将L-组氨酸分别与反式肉桂酸和对甲氧基肉桂酸反应,合成了两种组氨酸酰胺类衍生物,利用傅里叶变换红外光谱、质谱、氢谱/碳谱核磁共振谱进行了结构表征。采用分子操作环境(MOE)软件分子对接技术、荧光光谱法、同步荧光光谱法(SFS)、紫外-可见光谱法(UV-Vis),共同研究了两种衍生物分别和人血清白蛋白(HSA)相结合的机理。MOE对接结果显示,这两种衍生物与HSA的模拟结合能分别为-13.82和-16.25 kcal/mol,主要是通过范德华力和疏水作用结合在HSA亚结构域ⅡA(即siteⅠ)的疏水腔内。荧光猝灭数据表明,衍生物与HSA相互作用并形成了新的基态配合物,荧光猝灭过程为静态猝灭;不同温度(300、305和310 K)下衍生物与HSA相互作用的结合常数分别为1.773×104、6.354×10~3、1.260×10~3和5.314×10~4、4.614×10~3、1.420×10~3;由热力学参数得到衍生物与HSA的结合过程是由范德华力驱动;SFS表明,衍生物使得HSA的二级结构发生了变化。结合UV-Vis的结果可以确定,在体外生理条件下,组氨酸酰胺类衍生物均可以通过范德华力与HSA结合,并对HSA内源荧光产生静态猝灭及构象影响,这与分子对接结果一致,从而为组氨酸酰胺类衍生物药物的进一步开发提供了参考。     

Spectroscopic and Molecular Docking Study of the Interaction between Neutral Re(I) Tetrazolate Complexes and Bovine Serum Albumin

Re(I) complexes have potential in biomedical sciences as imaging agents, diagnostics and therapeutics. Thus, it is crucial to understand how Re(I) complexes interact with carrier proteins, like serum albumins. Here, two neutral Re(I) complexes were used (fac-[Re(CO)₃(1,10-phenanthroline)L], in which L is either 4-cyanophenyltetrazolate (1) or 4-methoxycarbonylphenyltetrazole ester (2) , to study the interactions with bovine serum albumin (BSA). Spectroscopic measurements, calculations of thermodynamic and Förster resonance energy transfer parameters, as well as molecular modelling, were performed to study differential binding between BSA and complex 1 and 2 . Induced-fit docking combined with quantum-polarised ligand docking were employed in what is believed to be a first for a Re(I) complex as a ligand for BSA. Our findings provide a basis for other molecular interaction studies and suggest that subtle functional group alterations at the terminal region of the Re(I) complex have a significant impact on the ability of this class of compounds to interact with BSA.     

荧光光谱结合表面增强拉曼光谱法研究紫檀芪与人血清白蛋白相互作用

在模拟人体生理条件下,应用荧光光谱和表面增强拉曼光谱法研究了紫檀芪(PTE)与人血清白蛋白(HSA)之间相互作用机制.结果表明,HSA的荧光能被PTE静态猝灭,并伴随有非辐射能量转移作用,两者形成了1:1复合物,结合距离r=1.495 nm,结合常数KA=1.12×104(298 K)、4.07×104(304 K)和2.45×105 L/mol(310 K).表面增强拉曼光谱研究揭示,PTE分子通过甲氧基与HSA进行结合;热力学数据表明,二者间的作用主要为疏水作用;标记竞争实验指出PTE优先结合HSA的位点Ⅲ.三维荧光光谱、同步荧光光谱和表面增强拉曼光谱结果显示,与PTE作用后,HSA构象发生变化,导致色氨酸残基周围环境疏水性降低,但对PTE分子构象影响不大.     

光谱法研究巯嘌呤与血清白蛋白的相互作用

利用荧光光谱和紫外-可见光谱法研究了巯嘌呤药物与牛血清白蛋白(BSA)和人血清白蛋白(HAS)分子间的相互结合反应.测得巯嘌呤与BSA、HAS反应的结合平衡常数分别为:2.39×103L/mol、1.28×103L/mol.根据Forster非辐射能量转移理论,求算了给体(BSA和HAS)与受体(巯嘌呤)间的结合距离和能量转移效率.用同步荧光法考察了巯嘌呤对BSA和HAS构象的影响.证实了巯嘌呤药物与牛血清白蛋白和人血清白蛋白的相互结合作用为单一的静态猝灭过程.     

光谱法与分子模拟研究胡椒碱对牛血清白蛋白的键和作用

利用荧光光谱法及紫外吸收光谱法结合计算机模拟技术研究了在模拟生理条件下胡椒碱(piperine)与牛血清白蛋白(Bovine Serum Albumin, BSA)的相互作用. 根据荧光猝灭的有关方程分别求得不同温度下(298, 308和318 K)药物与蛋白相互作用的结合常数、结合位点数及键合距离. 实验所得到的热力学参数(ΔH&#1256;＝－9.55 kJ/mol, ΔS&#1256;＝46.75 J&#8226;mol－1&#8226;K－1)表明维持药物与蛋白质的相互作用力主要是疏水作用和静电作用. 分子模拟的结果显示了胡椒碱与BSA的键合机理和键合模式, 表明维持药物与蛋白质的相互作用力主要是疏水作用和氢键(位于氨基酸残基His 242, Arg 222和Arg 218位). 此外, 基于胡椒碱的荧光猝灭效应, 首次探讨了药物-蛋白质体系的几种物理化学参数, 包括电荷密度(δ)、离解常数(Kd)及量子产率(F)的变化效应.     

荧光光谱法研究大豆甙元与牛血清白蛋白的相互作用

采用荧光光谱技术研究了大豆甙元与牛血清白蛋白(BSA)的相互作用.研究结果表明:290 K、303 K、310K、315 K温度下大豆甙元对BSA的猝灭速率常数Ksv随着温度升高逐渐降低,且均大于最大动态猝灭速率常数2×1010 L·mol -1·s-1,表明大豆甙元对BSA的荧光猝灭属静态猝灭过程.根据F(o)rst...     

荧光光谱法研究原花青素与牛血清白蛋白的相互作用

在pH=7.40的Tris-HCl缓冲体系中,采用荧光光谱技术研究了原花青素与牛血清白蛋白(BSA)的相互作用.根据295 K、303 K、310 K、315 K温度下的猝灭常数,表明原花青素对BSA的荧光猝灭为静态猝灭过程,由热力学参数焓变(△rHm)和熵变(△rSm)均大于零,推断出原花青素与BSA之间主要靠疏水作...     

光谱法与分子模拟对左旋紫草素和人血白蛋白键合作用的研究

采用荧光光谱法、紫外吸收光谱法和圆二色性光谱(CD)研究了模拟生理条件下左旋紫草素和人血清白蛋白(HSA)的相互作用,计算了反应的结合常数、结合位点数和热力学参数,并探讨了左旋紫草素对人血清白蛋白二级结构的影响.在温度为292、303、310和318 K时,根据Scatchard方程测得左旋紫草素和HSA的结合常数分别为3.118×10~6、0.249×10~6、0.112×10~6 和0.102×10~6 L·mol~(-1),结合位点数分别为1.308、1.094、1.026和1.018;焓变(ΔH)和熵变(ΔS)分别为-104.82 kJ·mol~(-1)、-238.18 J·mol~(-1)·K~(-1),左旋紫草素在人血清白蛋白上的结合位置与色氨酸残基间的距离为2.66 nm.分子模型研究表明,左旋紫草素与HSA在亚结构域ⅡA结合,二者间的作用力主要为疏水和氢键作用力.CD结果表明,左旋紫草素与HSA的键合使HSA中α-螺旋结构含量从55.80%降到52.31%.     

L-半胱氨酸与牛血清白蛋白的相互作用

用差示扫描量热法(DSC)和荧光光谱法研究了L-半胱氨酸(L-Cys)与牛血清白蛋白(BSA)在一定离子强度的Tris-HCl缓冲溶液中的相互作用,发现随着L-Cys浓度的增大,BSA的DSC热转变曲线峰形变宽变平,变性温度(tm)和变性焓(△Hm)降低,说明L-Cys的加入使BSA分子的高级结构发生了变化,稳定性降低...