A theoretical and NMR lanthanide‐induced shift (LIS) investigation of the conformations of lactams.

Molecular mechanics (MM) with MMFF94 and MMX force fields and ab initio (RHF/6‐31G*,RHF/6‐311G**, and B3LYP/6‐311G**) calculations are used with lanthanide‐induced shift (LIS) to investigate the conformations of N‐methyl‐2‐pyrrolidone 1 , N‐methyl‐2‐piperidone 2 , ε‐caprolactam 3, γ‐valerolactam (1,5‐dimethyl‐2‐pyrrolidone) 4, 2 ‐ azetidinone 5 , 4‐methyl azetidinone 6 , 4‐phenyl azetidinone 7 , and N‐methyl‐4‐phenyl azetidinone 8 . The Yb(fod)₃ paramagnetic induced shifts of all the ¹H and ¹³C nuclei are measured and the corresponding diamagnetic complexation shifts obtained by the addition of Lu(fod)₃. The complexation model (two‐, three‐, or four‐site) used depends on the relative rates of the processes involved. The amide inversion is the same order as that of the 5‐ and 6‐membered lactam rings and much faster than the lanthanide complexation and the inversion of the 7‐membered ring. Both MM and ab initio calculations give an envelope conformation for 1 with C‐4 out of the ring plane in agreement with the LIS analysis. For the piperidone ring of 2 , the half‐chair is calculated as the most stable form. The LIS analysis confirms this but cannot exclude a small amount (<2%) of the boat conformation. For 3 , the LIS analysis gives a minimum for 90:10% chair to boat conformation, and 4 exists in two envelope conformations with the C₅‐Me ps‐eq and ps‐ax in an eq/ax ratio of 94:6%. In 2‐azetidinone 5 , the ab initio calculations gave both ring and nitrogen planar, but the MMFF94 calculations give a butterfly ring and pyramidal nitrogen. The LIS analysis for 5 gave good agreement (Rcryst 0.46%) for the MMFF94 geometry with endo NH but the planar ab initio geometries worse agreement (Rcryst = 1.1%). For 4‐methyl‐2‐azetidinone 6 , the MMFF94 geometry gave good agreement (Rcryst 0.96%) with two butterfly conformations with axial and equatorial methyl groups in 1:1 ratio. All the planar geometries gave worse agreement (Rcryst >1.5%). In 4‐phenyl azetidinone 7 , the MMFF94 geometry with 60% of the axial conformer gave Rcryst 1.2% but the other geometries Rcryst >1.5%. In contrast the N‐methyl‐4‐phenyl‐2‐azetidinone 8 gave good agreement for all the geometries. The butterfly conformation gave Rcryst 1.1% for 80% of the axial conformer and the planar geometries Rcryst 0.98%. The LIS results confirm the ab initio and MM optimised geometries, but the conformer energies at times differ from the calculated values. They also differ considerably from the corresponding values for the lactones studied previously, and possible reasons for this are discussed.     

A 1H NMR and theoretical investigation of the conformations of some monosubstituted cyclobutanes

The complete analysis of the complex (1)H NMR spectra of some monosubstituted cyclobutanes was achieved to give all the (1)H chemical shifts and (n)J(HH) (n = 2, 3 and 4) coupling constants in these molecules. The substituent chemical shifts of the substituents in the cyclobutane ring differ significantly from those in acyclic systems. For example, the OH and the NH(2) groups in cyclobutanol and cyclobutylamine produce a large shielding of the hydrogens of the opposite CH(2) group of the ring compared with little effect on the comparable methylene protons of butane. These effects and the other (1)H shifts in the cyclobutanes were modelled successfully in the CHARGE program. The RMS error (calculated vs observed shifts) for the 34 (1)H shifts recorded was 0.053 ppm. The conformational equilibrium in these compounds between the axial and the equatorial conformers was obtained by comparing the observed and the calculated (4)J(HH) couplings. These couplings in cyclobutanes, in contrast to the corresponding (3)J(HH) couplings, show a pronounced orientation dependence; (4)J(eq-eq) is ca 5 Hz and (4)J(ax-ax) ca 0 Hz. The couplings in the individual conformers were calculated at the B3LYP/EPR-III level. The conformer energy differences ΔG(ax-eq) vary from 1.1 kcal mol(-1) for OH to 0.2 kcal mol(-1) for the CH(2)OH substituent. The values of the conformer energy differences are compared with the previous IR data and the corresponding theoretical values from molecular mechanics (MM) and DFT theory. Generally, good agreement is observed although both the MM and the DFT calculations deviate significantly from the observed values for some substituents.     

Conformational analysis. Part 40: a theoretical and NMR investigation of the conformations of cis‐ and trans‐cyclopentane‐1,3‐diol

The conformations of cis‐ ( 1 ) and trans‐cyclopentane‐1,3‐diol ( 2 ) have been studied by ab initio (Gaussian 98) and molecular mechanics (PCMODEL) calculations and by NMR spectroscopy. The calculations gave two low‐energy conformations for ( 1 ), 1A and 1B , both with axial hydroxyl groups. Two conformations with equatorial hydroxyl groups ( 1C and 1D ) were found but with much higher energy (ca 4.0 kcal mol^?1). Five low‐energy conformers were found for 2 . Four were envelope conformations and one a half‐chair. The complete analysis of the 400 MHz ¹H NMR spectra of 1 in a variety of solvents and 2 in chloroform was performed by extensive decoupling experiments, iterative computer analysis and spectral simulation. This gave all the H,H couplings in the molecule, including in 1 a long‐range ⁴J(H,H) coupling between H‐2cis and H‐4,5cis. The ³J(H,H) couplings were used to determine the conformer populations in these molecules. This was initially achieved using the Haasnoot, de Leeuw and Altona equation. to obtain the conformer couplings. It was found that this equation was not accurate for the C·CH₂·CH₂·C fragment in these molecules and the following equation was derived for this fragment from five‐ and six‐ membered cyclic compounds in fixed conformations: (1) The conformer populations were obtained by calculating the conformer couplings which were then compared with the observed couplings. Compound 1 in benzene solution is an approximately equal mixture of conformers 1A and 1B with small (<4%) amounts of 1C and 1D . In the polar solvents acetone and acetonitrile the populations of 1A and 1B are again equal, with 20% of 1C and <2% of 1D . In 2 the major conformers are 2B and 2D with small amounts of 2C , 2E and 2A . These novel findings are considered with previous data on cyclopentanol and cis‐ and trans‐cyclopentane‐1,2‐diol and it is shown that the axial hydroxyl substituent at the fold of the envelope appears to be a major factor in determining the conformational energies of these compounds. Copyright © 2003 John Wiley & Sons, Ltd.     

1H, 13C, and 73Ge NMR spectral analysis of substituted aryltrimethylgermanes

NMR chemical shifts of 1H, 13C, and 73Ge are reported for a series of monosubstituted aromatic trimethylgermanes of the type XC6H4Ge(CH3)3; X = p-N(CH3)2, p-OCH3, p-OC2H5, p-C(CH3)3, p-Si(CH3)3, p-Ge(CH3)3, p-Sn(CH3)3, p-CH3, m-CH3, -H, m-OCH3, p-Cl, p-Br, m-F, m-CF3, p-CF3, o-OCH3, and o-CH3. The relatively narrow 73Ge resonances show a strong correlation with Hammett sigma constants, with a correlation coefficient of 0.976 and 0.876 for 73Ge chemical shifts in meta- and para-substituted derivatives, respectively. The 13C chemical shifts of the methyl carbons bonded to germanium also display a relationship, with correlation coefficients of 0.904, 0.993, and 0.911 for para-, meta- and all derivatives, respectively. Comparisons of the Hammett plots for the homologous series XC6H4M(CH3)3; M = C, Si, Ge, Sn, show that, in general, correlation coefficients decrease while slopes increase significantly down the group, presumably reflecting the corresponding increase in chemical shift range of the group 14 atom. The Hammett constant derived for the p-Ge(CH3)3 group of +0.13 compares with the NMR-derived constants of -0.12 for p-C(CH3)3, +0.14 for p-Si(CH3)3, and -0.14 for p-Sn(CH3)3. The indication of electron release by carbon and tin can be rationalized through traditional hyperconjugative arguments for carbon and by the low electronegativity and consequent inductive effect of tin. The small electron attraction suggested by the positive constants for silicon and germanium can be simply, and perhaps naively, attributed to pi-acceptor interactions with the benzene ring.     

Towards the automatic analysis of NMR spectra: part 6. Confirmation of chemical structure employing both 1H and 13C NMR spectra

A method of comparing predicted and experimental chemical shifts was used to confirm or refute postulated structures. 1H NMR spectra returned all true positives with a false positive rate of 4%. When an analogous procedure was adopted for 13C NMR spectra, the false positive rate dropped to 1%, whereas the more practical HSQC data yielded a false positive rate of 2%. If the HSQC results were combined with 1H results, a false positive rate of 1% resulted, 4 times more accurate than 1H alone.     

Conformational equilibria of trans -3-X-cyclohexanols (X = Cl, Br, CH3 and OCH3). A low temperature NMR study and theoretical calculations

The integration of 1H and 13C NMR spectra, at - 90 degrees C in CS2/CD2Cl2 (9:1), for the trans-3-chlorocyclohexanol (1), trans-3-bromocyclohexanol (2), and trans-3-methoxycyclohexanol (4) showed that the equatorial-axial (ea) conformer occurs as ca 63, 63, and 69% in the conformational equilibrium, respectively. This corresponds to the following DeltaG(ea-ae) values (from (1)H spectrum): - 0.32 +/- 0.01, - 0.32 +/- 0.04, - 0.48 +/- 0.05 kcal mol(-1); and to (from 13C spectrum): - 0.31 +/- 0.04, - 0.35 +/- 0.05, and - 0.44 +/- 0.01 kcal mol(-1), respectively, in very good agreement within both series. Thus, although bromine is bulkier than chlorine, the 1,3-diaxial steric effects are similar in these equilibria. However, the integration of (1)H NMR spectrum for the trans-3-methylcyclohexanol (3) gave 90% of the 3ae conformer in the equilibrium, at - 90 degrees C on CS2/CD2Cl2 (9:1), corresponding to a DeltaG(ea-ae) value of 1.31 +/- 0.02 kcal mol(-1). The values obtained through the additivity rule, with data from monosubstituted cyclohexanes (DeltaG(Ad) = DeltaG(X) + DeltaG(OH)), for compounds 1, 2, and 4 (-0.37 +/- 0.15, - 0.34 +/- 0.09, and - 0.46 +/- 0.04 kcal mol(-1), respectively) are in very good agreement with the experimental values, but it is significantly smaller for compound 3 (0.79 +/- 0.02 kcal mol(-1)). Theoretical calculations through different levels of theory (HF/6-311 + g**, B3LYP/6-311 + g**, MP2/6-31 + g**, and CBS-4M) showed that CBS-4M is the best method for the study of conformational equilibria for these systems, since it provides DeltaG(ea-ae) values similar to the experimental values.     

Conformational analysis of N-arachidonylethanolamide (anandamide) using nuclear magnetic resonance and theoretical calculations

The conformational properties of cis-5,8,11,14-eicosatetraenoylethanolamide (anandamide) were analysed by the combined use of NMR experimental results plus molecular simulations. The structure of anandamide was found to be a predominantly linear with a seven-atom ring of the ethanolamine group having a hydrogen bond which stabilizes the molecule. The vinylic group present has a cis conformation in solution. The terminal chain has a linear conformation and undergoes isotropic fast motion typical of this structure. Copyright © 2001 John Wiley & Sons, Ltd.     

Complete assignment of 1H and 13C NMR spectra of some alpha-arylthio and alpha-arylsulfonyl substituted N-methoxy-N-methyl propionamides

The complete assignments of the 1H and 13C NMR spectra of the some alpha-arylthio and alpha-arylsulfonyl substituted N-methoxy-N-methyl propionamides, bearing methoxy, methyl, chloro, and nitro as substituents at the phenyl ring are reported.     

NMR analysis of a series of substituted pyrazolo[3,4-d] pyrimidines-4-amines

A series of 21 substituted pyrazolo[3,4-d]pyrimidines-4-amines were studied by (1)H and (13)C NMR. The application of two-dimensional techniques, HMQC and HMBC, allowed the complete assignment of the spectra for all the compounds.     

1H and 13C NMR spectral assignments of novel chromenylchalcones

Several types of chalcones containing 2H‐chromen group were synthesized. Claisen–Schmidt condensation of 2H‐chromen‐3‐carbaldehydes (I) with methoxy substituted acetophenones afforded (E)‐3‐(2H‐chromen‐3‐yl)‐1‐(methoxyphenyl)prop‐2‐en‐1‐ones (chromenylchalcones, 1–7). Other types of chromenylchalcone, (E)‐1‐(6‐methoxy‐2H‐chromen‐3‐yl)‐3‐(methoxyphenyl)prop‐2‐en‐1‐ones (8–13) were also obtained between reaction of methoxy substituted benzaldehydes and 1‐(6‐methoxy‐2H‐chromen‐3‐yl)ethanone (II). Dichromenylchalcones (14–16) were also synthesized through the same reaction between aldehydes (I) and ketone (II). Their complete ¹H‐NMR and ¹³C‐NMR assignments are reported here and more polysubstituted chromenylchalcones synthesized or isolated from the natural sources in the future can be identified on the basis of the NMR data reported here. Copyright © 2012 John Wiley & Sons, Ltd.     

1H, 13C and 15N NMR chemical shifts of substituted pyrazolo[1,5‐a]pyrimidines

¹H, ¹³C and ¹⁵N NMR chemical shifts of 10 substituted pyrazolo[1,5‐a]pyrimidines were assigned based on DQF ¹H, ¹H COSY, PFG ¹H, ¹³C HMQC and PFG ¹H,X (X = ¹³C and ¹⁵N) HMBC experiments and on literature data. Copyright © 2002 John Wiley & Sons, Ltd.     

1H, 13C and 15N NMR investigation of a new,condensed hexahydro‐1,3,5‐triazine

Treatment of 2‐acetyl‐2‐methylcyclopentanone with hydrazine hydrate yielded a new condensed hexahydro‐1,3,5‐triazine (3b), which is the first example of the ketimine‐type trimers. A complete ¹H, ¹³C and ¹⁵N NMR assignment of the compound was achieved. Copyright © 2003 John Wiley & Sons, Ltd.     

Conformational analysis of 14‐hydroxymodhephene by NMR,x‐ray diffraction and molecular modeling studies

The conformational state of the [3.3.3]propellane framework for 14‐hydroxymodhephene was determined by extensive application of one‐ and two‐dimensional ¹H and ¹³C NMR spectroscopy combined with x‐ray diffraction studies of a synthesized derivative, spectral simulation and molecular modeling. The conformational rigidity of the molecule in solution, established at room temperature, revealed the existence of envelope conformers for both cyclopentane fragments, with C‐7 puckered endo and C‐10 exo with respect to the mean plane containing the B and C rings. Copyright © 2003 John Wiley & Sons, Ltd.     

Conformational analysis of cis‐3, 5‐dioxa‐bicyclo[5.4.0]undecane and its 4‐substituted derivatives by DNMR,molecular modeling,and GIAO/DFT methods

Temperature‐dependent ¹H and ¹³C‐NMR spectra of the title compounds are presented. Coalescence effects are discussed and assigned to dynamic process—the interconversion of bicyclic system. The free energies of activation covered the range 39–52 kJ/mol. The dioxepane ring adopts twist‐chair (TC) conformation. GIAO/DFT calculation of isotropic shieldings for the set of low‐energy conformations showed that only one conformer is present at 298 K in solution that matched well with experimental data. Copyright © 2010 John Wiley & Sons, Ltd.     

Complete assignment of 1H and 13C NMR spectra of α‐phenylsulfinyl‐N‐methoxy‐ N‐methylpropionamide and some p‐substituted derivatives

The complete assignment of the ¹H and ¹³C NMR spectra of the diastereomeric pairs of some α‐arylsulfinyl‐substituted N‐methoxy‐N‐methylpropionamides with the substituents methoxy, methyl, chloro, nitro is reported. Copyright © 2008 John Wiley & Sons, Ltd.     

N‐N migration of a carbamoyl group in a pyrazole derivative revealed by NMR

During a synthesis of 5‐amino‐4‐(6‐methoxy‐2‐methylpyridin‐3‐yl)‐3‐methyl‐1H‐pyrazole‐1‐carboxamide (see Scheme 1), a side‐reaction produced 3‐amino‐4‐(6‐methoxy‐2‐methylpyridin‐3‐yl)‐5‐methyl‐1H‐pyrazole‐1‐carboxamide as a by‐product that forms an equilibrium with the target‐compound. The structure of the by‐product was elucidated by the interpretation of 1D and 2D (HMQC, HMBC) NMR data where ¹H‐¹⁵ N HMBC correlations revealed the position of carbamoyl group attachment on the pyrazole. Comparison of structures of the target‐compound and the by‐product showed that the latter resulted from N‐N migration of the carbamoyl group in the target‐compound. Copyright © 2013 John Wiley & Sons, Ltd.     

Effect of methoxyl groups on the NMR spectra: configuration and conformation of natural and synthetic indanic and tetralinic structures

Here, we studied the influence of the methoxyl groups attached at C‐7 and C‐2′ of natural and synthetic 1‐arylindanes on the chemical shift of the signal of bibenzylic hydrogen and carbon atoms and J_1,2 coupling constants. This influence was also analysed in natural 1‐aryltetralins and related compounds that possess methoxyl and/or hydroxyl groups bound at C‐8 and C‐2′. The methoxyl groups attached at C‐7 in indanes or at C‐8 in tetralins produce a deshielding signal at H‐1 and shield at C‐1 and a strong decrease in the value of J_1,2 due to the pseudoequatorial location adopted by the aryl group bound at C‐1, avoiding an ‘A^1,3 strain’. Furthermore, compounds with hydroxyl or methoxyl groups in C‐2′, in the absence of substituents of C‐7 or C‐8, present a strong deshielding signal at H‐1, strong shield of the C‐1 signal and a decrease in the value of J_1,2. This is attributed to the stereoelectronic effects of the methoxyl or hydroxyl groups, which we have called ‘Asarone effect’. NOESY experiments were conducted to confirm the configuration and conformation of some of the compounds included in this work. This study shows that both effects, A^1,3 strain and Asarone effect, must be taken into account when the structure of natural indanes and tetralins is analysed by using ¹H‐NMR and ¹³C‐NMR spectra. Copyright © 2016 John Wiley & Sons, Ltd.     

Conformational analysis of N-benzyl-N-o-tolyl-p-methylbenzene-sulfonamides from dynamic H NMR experiments and theoretical calculations

Theoretical studies of molecular conformations of four N-benzyl-N-o-tolyl-p-methylbenzenesulfonamides, by means of semiempirical PM3, ab initio (RHF and MP2) methods, and DFT approach, are presented and discussed in comparison with the experimental data. The free energy (ΔG^#) of rotation obtained by the dynamic shape analysis of the ¹H NMR spectra is ca. 16 kcal/mol for those systems for which the barrier has been probed experimentally. Failure to determine the barrier in the experimental spectra in the case of one system is attributed to the chiral conformation of the global minimum. The rotational profile was established at the PM3 level and verified at the DFT level of theory. The solvent effect, the 0th-order vibrational corrections, and the temperature dependence of the Boltzman distribution of conformers and kinetic equilibrium are discussed.     

1H NMR assignment of oligomeric grafts of maleic anhydride‐grafted polyolefin

The ¹ H NMR assignment of oligomeric grafts of maleic anhydride (MA)‐grafted polyolefin (PO), MA‐g‐PO hereafter, was experimentally demonstrated for the first time using NMR spectroscopy. ¹³ C DEPT, ¹ H‐¹ H DQF‐COSY, and ¹ H T₂‐edited spectroscopy of MA‐g‐PO proved that peaks of the intermediate methine protons of succinic anhydride oligomeric grafts, which are nearly tetrameric, are observed at 2.5–3.5 ppm and show broadening. Copyright © 2012 John Wiley & Sons, Ltd.