Kinetics of polycondensation reactions during self-assembly of mesostructured films studied by in situ infrared spectroscopy

In situ synchrotron FTIR experiments have been performed during evaporation-induced self-assembly (EISA) of mesoporous films and the role of silica polycondensation in obtaining highly organized mesostructures has been illuminated.     

In situ Fourier transform infrared spectroscopy as an efficient tool for determination of reaction kinetics

The performance of new FTIR-based monitoring technology to representatively determine reaction kinetics has been demonstrated on an example of homogeneously catalyzed liquid-phase sucrose hydrolysis to fructose and glucose. The reaction kinetics were investigated by using the ReactIR 1000 reaction analysis system, which enables determination of the component concentration from its characteristic FTIR spectrum. During the sucrose inversion, the ReactIR 1000 instrument connected to a computer controlled standard glass batch reactor provided the required operating conditions and information about the component concentration in real-time. We have studied the influence of hydrogen ion concentration, temperature and initial concentration of sucrose on the sucrose disappearance rate. It was found out that the inversion of sucrose is an irreversible reaction, which is not affected by the formation of fructose and glucose in the liquid-phase. Then, the parameters of the kinetic model (i.e., reaction rate constant and activation energy) were calculated. A comparison of the model output and the measured data showed that the kinetics of the sucrose inversion could be well described by means of the pseudo first-order kinetic model. Finally, the method of determining the kinetic model by FTIR spectroscopy was verified by comparing the results obtained in the batch reactor with the results obtained in the continuously stirred tank reactor.     

Adsorption kinetics of L-glutathione on gold and structural changes during self-assembly: an in situ ATR-IR and QCM study

The adsorption of L-glutathione (gamma-Glu-Cys-Gly) from ethanol on gold surfaces was studied in situ by both attenuated total reflection infrared (ATR-IR) spectroscopy and using a quartz crystal microbalance (QCM). The molecule is firmly anchored to the gold surface through the thiol group. Different IR signals of adsorbed L-glutathione, notably the amide I and nu(-COOH), show significantly different behavior with time, which reveals that their increase is not related to adsorption (mass uptake) alone. This indicates that structural transformations take place during the formation of the self-assembled monolayer (SAM). In particular, the intensity of the acid signal increases quickly only within the first couple of minutes. The complexity of the self-assembling process is confirmed by QCM measurements, which show fast mass uptake within about 100 s followed by a considerably slower regime. The structural change superimposed on the mass uptake is, based on the in situ time-resolved ATR-IR measurements, assigned to the interaction of the acid group of the Gly moiety with the surface. The latter group is protonated in ethanol but deprotonates upon interaction with the gold surface. The protonation-deprotonation equilibrium is sensitive to external stimuli, such as the presence of dissolved L-glutathione molecules. The interaction of the acid group with the surface and concomitant deprotonation proceeds via two distinguishable steps, the first being a reorientation of the molecule, followed by the deprotonation.     

Friction force spectroscopy as a tool to study the strength and structure of salivary films

In this work, we employ atomic force microscopy based friction force spectroscopy to study the strength and structure of salivary films. Specifically, films formed on model hydrophobic (methylated silica) and hydrophilic (clean silica) substrata have been studied in water at pHs in the range 3.3-7. Results reveal that films formed on both types of substrata can be described in terms of two different fractions, with only one of them being able to diffuse along the underlying substrata. We also show how the protective function of the films is reduced when the pH of the surrounding medium is lowered. Specifically, lowering of pH causes desorption of some components of the films formed on hydrophobic methylated surfaces, leading to weaker layers. In contrast, at low pHs, saliva no longer forms a layer on hydrophilic silica surfaces. Instead, an inhomogeneous distribution of amorphous aggregates is observed. Our data also suggest that hydrophobic materials in the oral cavity might be more easily cleaned from adsorbed salivary films. Finally, reproducible differences are observed in results from experiments on films from different individuals, validating the technique as a tool for clinical diagnosis of the resistance to erosion of salivary films.     

GISAXS: A versatile tool to assess structure and self-assembly kinetics in block copolymer thin films

Over the past two decades grazing incidence small-angle scattering (GISAXS) has morphed into a powerful tool for the determination of the structure and self-assembly kinetics of block copolymer thin films. An overview of the scattering process and the interpretation of GISAXS data is given and experimental requirements are discussed. The application of the technique for the characterization of block copolymer thin films is illustrated with selected examples.     

Use of Raman spectroscopy as an in situ tool to obtain kinetic data for organic transformations

Raman spectroscopy has been used as an in situ tool to obtain kinetic data for an organic transformation. The model reaction studied was the synthesis of 3-acetylcoumarin from the condensation between salicylaldehyde and ethyl acetoacetate with piperidine as a catalyst. The study shows that precise kinetic data can be obtained quickly and reproducibly, allowing for the facile determination of both overall reaction order and reaction order with respect to each component of the reaction. Additionally, Arrhenius parameters such as activation energy for a reaction can be readily obtained. In conjunction with computational modeling, this data-rich analysis technique also allows for in-depth probing of mechanistic aspects of reactions. Microwave heating proves to be an ideal tool for aiding in kinetic studies. It offers reproducible noncontact heating as well as precise temperature monitoring and data recording.     

Foam films as instrumentation in the study of amphiphile self-assembly

A survey on recent experimental investigations of microscopic foam films containing self-assembled amphiphilic structures is presented. A specific advantage of the microscopic film techniques is that the fine control of system parameters allows the estimation of the consecutive changes of film properties for low surfactant content and extremely small concentration changes. This gives a unique possibility to reach amphiphile quantities when initial onset of self-assembly is to be observed. The film characteristics are investigated via microinterferometric method, which operates with the measuring cell of Scheludko-Exerowa. The experimental set is additionally improved by including video-recording and consecutive image analysis. The results show the following: (1) Unstable black patterns (dots and spots) are observed; they have very short lifetimes and the films, which contain them rupture quickly. (2) Several of the kinetic characteristics of the films display a sharp change within a narrow surfactant concentration range. The experiments are interpreted on the basis of the assumption that a series of smaller self-assembled aggregates (premicelles) with various geometries exist at the interfaces and inside the thin film. The proposed theoretical scheme puts forward a mechanism connecting the formation of unstable black patterns (dots and spots) with the reorganization and destruction of the existing surfactant assemblies both in the bulk of the film and on the interfaces. The results suggest that the observed unstable black formations may serve as indicators for the presence of surfactant structures in amphiphilic solutions and the microscopic foam-film techniques has a serious potential as a prospective instrumentation in the study of amphiphilic self-assemblies.     

Time-resolved IR studies of monolayer self-assembly on a gold substrate using planar array infrared (PA-IR) spectroscopy

Time-resolved and spatially resolved infrared spectra (line images) of self-assembled monolayers of octadecylthiol (ODT) on gold substrates were investigated by planar array infrared (PA-IR) spectroscopy, with a grazing incidence reflection attachment. It was observed that PA-IR spectra with a good signal-to-noise ratio that is comparable to those obtained from Fourier transform infrared spectroscopy could be acquired with a significantly shorter collection time. Focusing on the peak intensities and peak positions of the CH2 asymmetric stretch (approximately 2918 cm(-1)) and the CH3 symmetric stretch (approximately 2960 cm(-1)), respectively, the molecular orientation and organization of the monolayers were determined. The ODT formed a uniform monolayer on the surface of the gold whether it was deposited within 1-2 s or over a 40 h period. Disordered monolayers formed instantly, and with an increase in dipping time, the monolayer became more ordered, becoming highly ordered after dipping times of many ( > 24) hours.     

Fourier transform infrared spectroscopy as a tool for the study of rare earths carbohydrates complexes

FT-IR spectra of the mixtures of praseodymium chloride and glucose in glassy state were investigated. From the changes of relative intensity and shifts of the characteristic frequency of glucose and water, it is concluded that the coordinated water molecules of the praseodymium ions are partially substituted by glucose through O-H groups which coordinated with praseodymium ions to form chelate ions.     

Rheo-attenuated total reflectance infrared spectroscopy: a new tool to study biopolymers

Whilst rheology is the reference technique to study the mechanical properties of unspun silk, we know little of the structure and the dynamics that generate them. By coupling infrared spectroscopy and shearing forces to study silk fibroin conversion, we are introducing a novel tool to address this gap in our knowledge. Here the silk conversion process has been studied dynamically using polarized attenuated total reflectance Fourier transform infrared spectroscopy whilst applying shear, thus revealing silk protein conformation and molecular orientation in situ. Our results show that the silk conversion process starts with a pre-alignment of the proteins followed by a rapid growth of the β-sheet formation and then a subsequent deceleration of the growth. We propose that this tool will provide further insight into not only silk but any biopolymer solution, opening a new window into biological materials.     

An in situ study of the hydriding kinetics of Pd thin films

The hydriding kinetics of Pd thin films has been investigated in detail. The in situ experimental technique used in this work consists of a high resolution curvature measurement setup, which continuously monitors the reflections of multiple laser beams reflecting off a cantilevered sample. After mounting the sample inside a vacuum chamber, a H-containing gas mixture is introduced to instantaneously generate a given hydrogen partial pressure (p(H(2))) inside the chamber. The resulting interaction of hydrogen with the Pd layer then leads to a volume expansion of the thin film system. This induces in turn changes in the sample curvature as a result of internal stresses developing in the Pd film during a hydriding cycle. Based on such in situ curvature data, three different kinetic regimes have been resolved. The first two exhibited a linear increase of the internal stress in the compressive direction with time. A systematic study of the p(H(2))-dependency of the two constant slopes was performed, based on newly derived constitutive kinetic equations. This resulted in the identification of the first linear regime to be limited by absorption and the second one by adsorption. After adsorption equilibrium is reached at the end of the second regime, a third, non-linear kinetic regime, limited by absorption, was found to precede the final hydriding equilibrium. This switch back to absorption-limited kinetics likely occurs due to a coverage dependent change in the adsorption enthalpy of the surface hydrogen. Furthermore, from our in situ experimental data, relevant kinetic and thermodynamic hydriding parameters have been derived. As a result, this study was able to provide a self-consistent quantitative interpretation of the entire Pd room temperature hydriding cycle in the alpha-phase domain.     

Fourier transform infrared spectroscopy as a tool to study structural properties of cytochromes P450 (CYPs)

Cytochrome P450 proteins (CYPs) are a big class of heme proteins which are involved in various metabolic processes of living organisms. CYPs are the terminal catalytically active components of monooxygenase systems where the substrate binds and is hydroxylated. In order to be functionally competent, the protein structures of CYPs possess specific properties that must be explored in order to understand structure–function relationships and mechanistic aspects. Fourier transform infrared spectroscopy (FTIR) is one tool that is used to study these structural properties. The application of FTIR spectroscopy to the secondary structures of CYP proteins, protein unfolding, protein–protein interactions and the structure and dynamics of the CYP heme pocket is reviewed. A comparison with other thiolate heme proteins (nitric oxide synthase and chloroperoxidase) is also included. Figure The protein secondary structure, protein unfolding, redox-partner protein–protein interaction, structural changes induced by the reduction of the heme iron, and the structure and dynamics of the active site of cytochromes P450 (CYP) can be studied using Fourier transform infrared spectroscopy (FTIR). FTIR spectroscopy is a good approach for gaining a deeper insight into structure–function relationships in CYPs. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Application of online near infrared spectroscopy to study the kinetics of anionic polymerization of butadiene

Online Fourier-transform near infrared (FT-NIR) spectroscopy in combination with a fiber optic probe was utilized to study the kinetics of the anionic polymerization of butadiene. The conversion of the butadiene to methylene protons in the polymer was monitored in solution polymerization conditions by monitoring the absorbance at 1632 nm. The off-line gel permeation chromatography, GPC, technique was used to validate the online FT-NIR spectroscopy method. Butadiene polymerization kinetics in cyclohexane initiated with n-butyllithium at different initiator concentrations and temperatures was studied. A phenomenological kinetic expression for the anionic polymerization of butadiene in cyclohexane initiated with n-butyllithium was determined. The predictions of the kinetic expression were in agreement with kinetic data reported in the literature.     

In situ real-time monitoring of epoxy/amine kinetics by remote near infrared spectroscopy

An experimental set-up for in situ real-time monitoring of chemical reactions by remote fiber optic near-infrared spectroscopy was assembled in our laboratory and is described in this communication. A series of epoxy/amine formulations, nonpolymer-forming, and polymerforming alike, were prepared and their reaction kinetics investigated. Accurate and reproducible spectra were generated, the characteristic near-infrared peaks assigned, and the reaction kinetics evaluated by monitoring the rates of disappearance and/or appearance of the characteristic peaks. The effect of the chemical structure and functionality of the components were pointed out and a method suggested to correlate the spectral information with the chemophysical changes in multifunctional formulations.     

Time-resolved infrared spectroscopy of the lowest triplet state of thymine and thymidine

Vibrational spectra of the lowest energy triplet states of thymine and its 2′-deoxyribonucleoside, thymidine, are reported for the first time. Time-resolved infrared (TRIR) difference spectra were recorded over seven decades of time from 300 fs to 3 μs using femtosecond and nanosecond pump-probe techniques. The carbonyl stretch bands in the triplet state are seen at 1603 and 1700 cm⁻¹ in room-temperature acetonitrile-d₃ solution. These bands and additional ones observed between 1300 and 1450 cm⁻¹ are quenched by dissolved oxygen on a nanosecond time scale. Density-functional calculations accurately predict the difference spectrum between triplet and singlet IR absorption cross sections, confirming the peak assignments and elucidating the nature of the vibrational modes. In the triplet state, the C4O carbonyl exhibits substantial single-bond character, explaining the large (70 cm⁻¹) red shift in this vibration, relative to the singlet ground state. Femtosecond TRIR measurements unambiguously demonstrate that the triplet state is fully formed within the first 10 ps after excitation, ruling out a relaxed ¹nπ^* state as the triplet precursor.     

Extending in situ attenuated-total-reflection surface-enhanced infrared absorption spectroscopy to ni electrodes

Surface-enhanced infrared absorption spectroscopy (SEIRAS) in the attenuated-total-reflection configuration (ATR-SEIRAS) has been applied for the first time to Ni electrodes. SEIRA-active Ni electrodes were obtained through initial chemical deposition of a 60-nm-thick Au underlayer on the reflecting plane of an ATR Si prism followed by potentiostatic electrodeposition of a 40-nm-thick Ni overlayer in a modified Watt's electrolyte. The Ni nanoparticle film thus obtained exhibited exceptionally enhanced IR absorption for the surface probe molecule CO while maintaining unipolar and normally directed bands. With the advantages of ATR-SEIRAS, free H2O molecules coadsorbed with CO at the Ni electrode were revealed, and their role in the electrooxidation of the CO adlayer at the Ni electrode is discussed. In addition, the conversion of bridge to linearly bonded CO at Ni electrode in a neutral solution was clearly identified upon electrooxidation of the CO adlayer. ATR-SEIRAS was also used to characterize the adsorption configuration of a pyridine adlayer at the Ni electrode. Both A1 and B1 modes of adsorbed pyridine were detected with comparably large intensities, essentially maintaining the spectral feature of pyridine molecules rather than that of "alpha-pyridyl species", which strongly suggests an "edge-tilted pyridine" configuration present at the Ni electrode, a configuration intermediate between the "end-on pyridine" and "edge-on alpha-pyridyl" adsorption modes reported in the literature.     

Near infrared reflectance spectroscopy as a tool for the control of sheep leather defatting

The fat content is one of the variables to be controlled by the tanning industry with a view to obtaining leather for various commercial purposes. Ensuring the production of quality leather products frequently entails using some defatting treatment, particularly when the raw skin is rich in natural fat. The official method for determining fat in leather, IUC 4, is rather slow; also, it uses polluting reagents and involves powdering samples for Soxhlet extraction with low-polarity solvents. The combination of NIR diffuse reflectance spectroscopy as implemented with a fibre-optic probe and multivariate calibration is probably the best choice for the direct determination of fat in leather and the monitoring of leather defatting.In this work, a method for the determination of fat in leather and the control of the defatting process in an expeditious manner and with no sample treatment was developed. Defatting tests were conducted on leather specimens from lambs of various breeds and origins in order to span as wide as possible a range of variability in their properties and natural fat content. The NIR spectra used to construct the calibration matrices were recorded directly on the leather samples prior to and after defatting. Fat contents were determined by partial least-squares regression (PLSR), using the values obtained with the official method as references. Notwithstanding the complex nature of leather, the calibration models used provided good external predictions: the largest overall relative error, obtained by using a single calibration matrix for natural and defatted specimens, was 10%. The proposed method is therefore an advantageous alternative to the official method.     

Diffuse reflectance infrared Fourier transform spectroscopy as a tool to characterise water in adsorption/confinement situations

We present experimental data acquired by diffuse reflectance infrared spectroscopy in the mid-IR (4000-400 cm(-1)), on micrometric-sized mineral grain powders. The spectral evolution of the OH-stretching band is followed when the adsorbed water film is thinned under dry conditions, from high to low hydration states. The IR bands are found to be characteristic of the degree of adsorption/confinement of the liquid water. The OH-stretching band is shifted toward shorter wavenumbers than in bulk water, showing that a significant portion of adsorbed water has a higher intermolecular bonding energy. Complementary treatment of the kinetics of water desorption, varying with the surface forces in the water film, confirms the relationships of these bands with the constrained water state. We distinguish different water types obeying liquid-liquid interactions (free and capillary water) or dominated by solid-water interactions (confined and adsorbed water). Part of this study is devoted to mesoporous silica MCM-41, of interest due to the restricted geometries of its mesopores (4.7 nm) favouring the confined water state. The methodology allows us to distinguish bulk and adsorbed/confined water, using spectral analysis coupled with an understanding of the dynamic behaviour of the desorption process.     

Luminescence spectroscopy as a tool for testing of cure kinetics of epoxy resins

In this paper, steady-state luminescence spectroscopy is used for the analysis of curing of epoxy resin. The advantage of this method is its rapidity, simplicity and sensitivity. Moreover, this method is contactless, and thus non-invasive. The aim is to analyze epoxy resin, mathematically describe its curing kinetics and determine its storage temperature. Using the photoluminescence method, a rapid procedure for obtaining the necessary technological data is achieved. This method is suitable for continuous measurement in production because there is no contact with the material, and the measurement itself can be performed very quickly. The elaborated mathematical model can serve as a basis for creating algorithms for automated data processing in case of fully robotic workplaces.