DNA interactions of ruthenium(II) complexes with a polypyridyl ligand: 2-(2, 5-dimethoxyphenyl)-1<Emphasis Type="Italic">H</Emphasis>-imidazo[4,5-<Emphasis Type="Italic">f</Emphasis>]1,10-phenanthroline

This article describes the synthesis of a polypyridyl ligand, namely 2-(2, 5-dimethoxyphenyl)-1H-imidazo[4,5-f]1,10-phenanthroline (DMPIP) and its Ru(II) complexes, namely [Ru(bipy)₂DMPIP]²⁺ (1), [Ru(dmb)₂DMPIP]²⁺ (2) and [Ru(phen)₂DMPIP]²⁺ (3) ((bipy = 2,2′-bipyridine, dmb = 4,4′-dimethyl-2,2′-bipyridine, phen = 1,10-phenanthroline). The complexes were characterized by elemental analysis, plus IR, ¹H-NMR and ¹³C [¹H]-NMR spectra. The interactions of the complexes with calf thymus DNA were investigated. The results indicate that the three complexes can intercalate into DNA. Under irradiation at 365 nm, all three complexes promote the photocleavage of plasmid pBR 322 DNA. Inhibitor studies suggest that singlet oxygen plays a significant role in the cleavage mechanism for the complexes.     

Synthesis, characterization and DNA-binding studies of ruthenium(II) mixed-ligand complexes containing dipyrido[1,2,5]oxadiazolo[3,4-b]quinoxaline

A novel ligand dipyrido[1,2,5]oxadiazolo[3,4-b]quinoxaline (dpoq) and its complexes [Ru(bpy)₂(dpoq)]²⁺ and [Ru(phen)₂(dpoq)]²⁺ (bpy = 2,2′-bipyridine; phen = 1,10-phenanthroline) have been synthesized and characterized by elemental analysis, electrospray mass spectra and ¹H NMR. The interaction of Ru(II) complexes with calf thymus DNA (CT-DNA) was investigated by absorption spectroscopy, fluorescence spectroscopy, thermal denaturation and viscosity measurements. Results suggest that two Ru(II) complexes bind to DNA via an intercalative mode.     

Synthesis,DNA interaction and photocleavage studies of ruthenium(II) complexes with 2-(pyrrole) imidazo[4,5-f]-1,10-phenanthroline as an intercalative ligand

Three Ru(II) complexes, namely [Ru(bipy)₂PRIP]²⁺ (1), [Ru(dmb)₂PRIP]²⁺ (2), and [Ru(phen)₂PRIP]²⁺ (3) (dmb = 4,4′-dimethyl-2,2′-bipyridine; PRIP = 2-(pyrrole) imidazo [4,5-f]-1,10-phenanthroline) have been synthesized and characterized by elemental analysis, mass spectra, IR, ¹H NMR and ¹³C NMR. The DNA-binding properties of the three complexes with calf-thymus DNA (CT-DNA) were investigated by spectrophotometry, fluorescence methods and viscosity measurements. The results suggest that all three complexes bind to CT-DNA through intercalation. Also, when irradiated at 365 nm, the three complexes promote the photocleavage of plasmid pBR-322 DNA. Under comparable experimental conditions, complex 3 cleaves DNA more effectively than complexes 1 and 2.     

Review: Synthesis,characterization, and DNA-binding properties of Ru(II) molecular “light switch” complexes

This article presents recent progress in our laboratory on the interactions of Ru(II) polypyridyl complexes with calf thymus DNA (CT-DNA). Mixed polypyridyl Ru(II) complexes [Ru(L)₄(AIP)]²⁺ and [Ru(L)₄PyIP]²⁺, where L is 4-amino pyridine and pyridine (AIP?=?2-(9-anthryl)-1H-imidazo[4,5-f][1,10]phenanthroline; PyIP?=?2-(1-pyrenyl)-1H-imidazo[4,5-f][1,10]phenanthroline), have been synthesized and characterized by elemental analysis, and physicochemical methods such as ESI-MS, UV-Vis, IR, and NMR spectroscopic techniques. Electronic absorption titrations, fluorescence spectroscopy, viscosity measurements, and salt-dependent studies of CT-DNA in the presence of incremental amounts of all four Ru(II) complexes clearly demonstrate that all four complexes bind to DNA by intercalation. The DNA-binding affinities of these complexes follow the order [Ru(4-APy)₄(PyIP)]^2+?>?[Ru(Py)₄PyIP]^2+?>?[Ru(4-APy)₄(AIP)]^2+?>?[Ru(Py)₄AIP]²⁺. Irradiation of pBR 322 DNA with these complexes results in nicking of the plasmid DNA. All four complexes were screened for antimicrobial activity. All complexes also exhibited DNA “light switch” properties. These results suggest that both ancillary ligand and intercalative ligand influence the binding of these complexes to DNA.     

Synthesis, characterization and DNA-binding characteristics of Ru(II) molecular light switch complexes

A series of four polypyridyl Ru(II) complexes such as [Ru(L)₄(PIP)]²⁺ and [Ru(L)₄PPIP]²⁺ where L is 4-amino pyridine and Pyridine (PIP?=?2-phenylimidazo[4,5-f] [1, 10] phenanthroline), (PPIP?=?2-(4??-phenoxy-phenyl) imidazo[4,5-][1, 10]phenanthroline) have been synthesized and characterized by elemental analysis, physicochemical methods such as UV?Cvis, IR and NMR spectroscopic techniques. The DNA-binding behavior of these complexes was investigated by electronic absorption titrations, fluorescence spectroscopy, viscosity measurements and salt-dependent studies. The experimental results indicate that all these complexes can bind to DNA through an intercalation mode, the DNA-binding affinities of these complexes follow the order [Ru(4-APy)₄(PPIP)]²⁺(1)?>?[Ru(Py)₄PPIP]²⁺(2)?>?[Ru(4-APy)₄(PIP)]²⁺(3)?>?[Ru(Py)₄PIP]²⁺(4). Noticeably, these complexes have been found to be efficient photosensitisers for strand scissions in plasmid DNA. Further, all four complexes screened for their antimicrobial activity indicate that the complexes show appreciable activity against Escherichia coli and Neurospora Crassa. In addition, in the presence of Co²⁺, the emission of DNA-[Ru(L₄)PPIP/PIP]²⁺ can be quenched and recovered by the addition of EDTA, which exhibited the DNA ??light switch?? properties.     

Ruthenium (II) polypyridyl complexes based on bipyridine and two novel diimine ligands with carrier-transporting unit: synthesis, photoluminescence and redox properties

A series of ruthenium (II) complexes, [Ru(bpy)₂L]X₂ (L = L1, L2; X = Cl⁻, PF₆⁻, SCN⁻), were synthesized based on bipyridine and two novel diimine ligands L1 and L2 (L1 = 1-(4-5′-phenyl-1,3,4-oxadiazolylphenyl)-2-pyridinyl-benzoimidazole, L2 = 1-(4-carbazolylphenyl)-2-pyridinylbenzimidazole); and the crystal structure of [Ru(bpy)₂L1]Cl₂ was also described. [Ru(bpy)₂(Pybm)]X₂ (Pybm = 2-(2-pyridine)benzimidazole) complexes were also prepared as reference samples. In the UV-vis absorption spectra there are one strong π → π* transition and two dπ (Ru) → π* transitions. By comparisons of photoluminescence properties between [Ru(bpy)₂L]X (L = L1, L2) and the reference complexes we find that the complexes with carrier-transporting groups of carbazole and oxadizole have the higher emission intensity and quantum efficiency. One reversible oxidation process in the range 0.80-1.00 V exists in each of the complexes which is assigned to the metal oxidation, [Ru(III)(bpy)₂L]²⁺ + e⁻?[Ru(II)(bpy)₂L]⁺.     

Detection of Aeromonas hydrophila DNA oligonucleotide sequence using a biosensor design based on Ceria nanoparticles decorated reduced graphene oxide and Fast Fourier transform square wave voltammetry

A new strategy was introduced for ssDNA immobilization on a modified glassy carbon electrode. The electrode surface was modified using polyaniline and chemically reduced graphene oxide decorated cerium oxide nanoparticles (CeO₂NPs-RGO). A single-stranded DNA (ssDNA) probe was immobilized on the modified electrode surface. Fast Fourier transform square wave voltammetry (FFT-SWV) was applied as detection technique and [Ru(bpy)₃]^2+/3+ redox signal was used as electrochemical marker. The hybridization of ssDNA with its complementary target caused a dramatic decrease in [Ru(bpy)₃]^2+/3+ FFT-SW signal. The proposed electrochemical biosensor was able to detect Aeromonas hydrophila DNA oligonucleotide sequence encoding aerolysin protein. Under optimal conditions, the biosensor showed excellent selectivity toward complementary sequence in comparison with noncomplementary and two-base mismatch sequences. The dynamic linear range of this electrochemical DNA biosensor for detecting 20-mer oligonucleotide sequence of A. hydrophila was from 1 × 10⁻¹⁵ to 1 × 10⁻⁸ mol L⁻¹. The proposed biosensor was successfully applied for the detection of DNA extracted from A. hydrophila in fish pond water up to 0.01 μg mL⁻¹ with RSD of 5%. Besides, molecular docking was applied to consider the [Ru(bpy)₃]^2+/3+ interaction with ssDNA before and after hybridization.     

Synthesis, characterization and photophysics of bimetallic manganese(I) and ruthenium(II) complexes

A series of new manganese(I) and ruthenium(II) monometallic and bimetallic complexes made of 2,2′-bipyridine and 1,10-phenanthroline ligands, [Mn(CO)₃(NN)(4,4′-bpy)]⁺, [{(CO)₃(NN)Mn}₂(4,4′-bpy)]²⁺ and [(CO)₃(NN)Mn(4,4′-bpy)Ru(NN)₂Cl]²⁺ (NN = 2,2′-bipyridine, 1,10-phenanthroline; 4,4′-bpy = 4,4′-bipyridine) are synthesized and characterized, in addition to already known ruthenium(II) complexes [Ru(NN)₂Cl(4,4′-bpy)]⁺ and [Cl(NN)₂Ru(4,4′-bpy)Ru(NN)₂Cl]²⁺. The electrochemical properties show that there is a weak interaction between two metal centers in Mn–Ru heterobimetallic complexes. The photophysical behavior of all the complexes is studied. The Mn(I) monometallic and homobimetallic complexes have no detectable emission. In Mn–Ru heterobimetallic complexes, the attachment of Mn(I) with Ru(II) provides interesting photophysical properties.     

Synthesis and DNA interaction studies of ruthenium(II) complexes with isatino[1, 2-b]-1,4,8,9-tetraazatriphenylene as an intercalative ligand

The binding of the ruthenium(II) complexes [Ru(bpy)₂(ITAP)](ClO₄)₂ (bpy = 2,2’-bipyridine) and [Ru(phen)₂(ITAP)](ClO₄)₂ (phen = 1,10-phenanthroline, ITAP = isatino[1,2-b]-1,4,8,9-tetraazatriphenylene) to calf thymus DNA (CT-DNA) have been investigated with UV–visible and emission spectroscopy, viscosity measurements, thermal denaturation, and photoactivated cleavage. The experimental results indicate that the two complexes bind to CT-DNA through an intercalative mode. The two Ru(II) complexes in the presence of plasmid pBR322 DNA have been found to give rise to nicking of DNA upon irradiation.     

Electrochemistry of a novel monoruthenated porphyrin and its interaction with DNA

Interactions of an anisomerous ruthenated porphyrin [Ru(MPyTPP)(bpy)₂Cl]⁺ (where bpy = 2,2′-bipyridine, MPyTPP = 5-pyridyl-10,15,20-triphenyl porphyrin) with calf thymus DNA are studied using a tin-doped indium oxide (ITO) electrode. The Ru^III/II redox reaction for the complex exhibits a surface-controlled electron transfer process in buffer solutions. There exists an obvious interaction of the adsorbed [Ru(MPyTPP)(bpy)₂Cl]⁺ on an ITO electrode with DNA in the buffer solutions. The formal potential for [Ru(MPyTPP)(bpy)₂Cl]^2+/+ redox reaction is found to shift negatively in the presence of DNA compared with that in the absence of DNA. However, the current signals of [Ru(bpy)₃]^3+/2+ reaction exhibits a distinct catalytic enhancement to DNA, in contrast to the interactions of [Ru(MPyTPP)(bpy)₂Cl]⁺with DNA.     

Synthesis,characterization, and DNA binding of ruthenium(II) complexes with 2-benzo[b] furan-2-yl-1H-imidazo[4,5f][1,10]phenanthroline as an intercalative ligand

DNA-binding properties of a number of ruthenium complexes with different polypyridine ligands are reported. The new polypyridine ligand BFIP (=2-benzo[b] furan-2-yl-1H-imidazo[4,5-f][1,10]phenanthroline) and its ruthenium complexes [Ru(bpy)₂BFIP]²⁺ (bpy = 2,2′-bipyridine), [Ru(dmb)₂BFIP]²⁺ (dmb = 4,4′-dimethyl-2,2′-bipyridine), and [Ru(phen)₂BFIP]²⁺ (phen = 1,10-phenanthroline) have been synthesized and characterized by elemental analysis, mass spectra, IR, UV-Vis, ¹H- and ¹³C-NMR, and cyclic voltammetry. The DNA binding of these complexes to calf-thymus DNA (CT-DNA) was investigated by spectrophotometric, fluorescence, and viscosity measurements. The results suggest that ruthenium(II) complexes bind to CT-DNA through intercalation. Photocleavage of pBR 322 DNA by these complexes was also studied, and [Ru(phen)₂BFIP]²⁺ was found to be a much better photocleavage agent than the other two complexes.     

Synthesis, characterization and photophysics of alkyne bridged bimetallic rhenium(I) and ruthenium(II) complexes

Six new homobimetallic and heterobimetallic complexes of rhenium(I) and ruthenium(II) bridged by ethynylene spacer [(CO)₃(bpy)Re(BL)Re(bpy)(CO)₃]²⁺ [Cl(bpy)₂Ru(BL)Ru(bpy)₂Cl]²⁺ and [(CO)₃(bpy)Re(BL)Ru(bpy)₂Cl]²⁺ (bpy = 2,2′-bipyridine, BL = 1,2-bis(4-pyridyl)acetylene (bpa) and 1,4-bis(4-pyridyl)butadiyne (bpb) are synthesized and characterized. The electrochemical and photophysical properties of all the complexes show a weak interaction between two metal centers in heterobimetallic complexes. The excited state lifetime of the complexes is increased upon introduction of ethynylene spacer and the transient spectra show that this is due to delocalization of electron in the bridging ligand. Also, intramolecular energy transfer from *Re(I) to Ru(II) in Re–Ru heterobimetallic complexes occurs with a rate constant 4 × 10⁷ s⁻¹.     

Synthesis,characterization, DNA-binding and DNA-photocleavage studies of [Ru(bpy)2(pmip)] and [Ru(phen)2(pmip)] (pmip = 2-(2′-pyrimidyl)imidazo[4,5-f][1,10]phenanthroline

Two new Ru(II) complexes, [Ru(bpy)₂(pmip)]²⁺ (1) and [Ru(phen)₂(pmip)]²⁺ (2), have been synthesized and characterized by elemental analysis, ESI-MS and ¹H NMR spectra. Their DNA-binding properties were studied by means of UV–VIS, emission and CD spectra, thermal denaturation and viscosity measurements as well as their DNA-photocleavage properties. The experimental results show that both 1 and 2 can bind to DNA in an intercalative mode; the DNA-binding affinity of 2 is greater than that of 1, which suggests that the ancillary ligands have a significant effect on the spectroscopic properties and DNA-binding behavior of the Ru(II) complexes. Under irradiation with UV light, the Ru(II) complexes show excellent efficiency of cleaving DNA. This research may provide valuable insight into the interactions of metal complexes with DNA, knowledge that is an excellent backdrop for the rational design of promising drugs.     

Anticancer activity of new organo-ruthenium, rhodium and iridium complexes containing the 2-(pyridine-2-yl)thiazole N,N-chelating ligand

The dinuclear dichloro complexes [(η⁶-arene)₂Ru₂(μ-Cl)₂Cl₂] and [(η⁵-C₅Me₅)₂M₂(μ-Cl)₂Cl₂] react with 2-(pyridine-2-yl)thiazole (pyTz) to afford the cationic complexes [(η⁶-arene)Ru(pyTz)Cl]⁺ (arene = C₆H₆1, p-ⁱPrC₆H₄Me 2 or C₆Me₆3) and [(η⁵-C₅Me₅)M(pyTz)Cl]⁺ (M = Rh 4 or Ir 5), isolated as the chloride salts. The reaction of 2 and 3 with SnCl₂ leads to the dinuclear heterometallic trichlorostannyl derivatives [(η⁶-p-ⁱPrC₆H₄Me)Ru(pyTz)(SnCl₃)]⁺ (6) and [(η⁶-C₆Me₆)Ru(pyTz)(SnCl₃)]⁺ (7), respectively, also isolated as the chloride salts. The molecular structures of 4, 5 and 7 have been established by single-crystal X-ray structure analyses of the corresponding hexafluorophosphate salts. The in vitro anticancer activities of the metal complexes on human ovarian cancer cell lines A2780 and A2780cisR (cisplatin-resistant), as well as their interactions with plasmid DNA and the model protein ubiquitin, have been investigated.     

Aryl-modified ruthenium bis(terpyridine) complexes: Quantum yield of 1O2 generation and photocleavage on DNA

Six Ru(II)bis(tpy) (tpy = 2,2′:6′,2″-terpyridine) complexes, functionalized with one or two 2-naphthyl, 1-pyrenyl, or 9-anthracenyl at 4′-position of terpyridine respectively, were investigated with emphasis on their ¹O₂ generation quantum yields and photocleavage capabilities on DNA. For naphthyl and pyrenyl modified complexes, the lowest energy excited state is ³MLCT, and therefore they behave very similarly to the parent complex, [Ru(tpy)₂]²⁺, having very low ¹O₂ generation quantum yields. In contrast, for anthracenyl modified complexes, the lowest energy excited state is anthracene-localized ³ππ^* state, as a result, they exhibit extremely high ¹O₂ generation quantum yields (0.96 and 0.71 for bis- and mono-substituted complexes, respectively) and potent photodamage abilities on calf thymus DNA, suggesting their promising applications in ¹O₂-involved processes, such as DNA photocleavage.     

Synthesis and properties of alkylruthenium complexes bearing primary and secondary amine ligands

A series of 18-electron alkylruthenium complexes, RuR[κ²(N,N′)-(S,S)-R′SO₂NCHPhCHPhNH₂](η⁶-arene) (Ph = C₆H₅, R′ = p-CH₃C₆H₄ and CH₃), bearing a N-sulfonylated diamine ligand was synthesized from the reaction of RuCl[κ²(N, N′)-(S,S)-R′SO₂NCHPhCHPhNH₂](η⁶-arene) with alkylzinc reagents, in which transmetalation proceeded smoothly to give the desired alkyl complexes in good yield and selectivity. Although the isolable amine Ru complexes bearing functionalized alkyl ligands were thermally stable, the simple methyl and ethyl Ru complexes underwent intramolecular deprotonation from NH protons to give the amido Ru complexes with release of the alkanes. The reactivity of the alkyl Ru complexes is highly affected by the structures of the arene ligands.     

Cyclometallated ruthenium(III) complexes: Synthesis,structure and properties

Reactions of Schiff bases (H₂apahR) derived from acetophenone and acid hydrazides, triethylamine and [Ru(PPh₃)₃Cl₂] (1:2:1 mole ratio) in methanol provide cyclometallated ruthenium(III) complexes of formula trans-[Ru(apahR)(PPh₃)₂Cl] in 74–81% yields. The complexes have been characterized by elemental analysis, magnetic susceptibility, spectroscopic (infrared, electronic and EPR) and electrochemical measurements. X-ray crystal structures of two representative complexes have been determined. In each complex, the metal centre is in distorted octahedral CNOClP₂ coordination sphere assembled by the C,N,O-donor meridionally spanning apahR^2?, the chloride and the two mutually trans-oriented PPh₃ molecules. All the complexes are one-electron paramagnetic (μ_eff. = 1.85–1.98 μ_B) and display rhombic EPR spectra in frozen (120 K) dichloromethane-toluene (1:1) solution. Electronic spectra of the complexes display several absorptions within 470–270 nm due to ligand-to-metal charge transfer and ligand centred transitions. The complexes are redox active and display a Ru(III) → Ru(II) reduction and a Ru(III) → Ru(IV) oxidation in the potential ranges ?0.66 to ?0.70 V and 0.75 to 0.80 V (vs. Ag/AgCl), respectively.     

Experimental and density functional theory (DFT) studies on the DNA-binding trend and spectral properties of two new Ru(II) complexes: [Ru(L)2(mip)](ClO4)2 (L = 2,9-dmp and 4,7-dmp)

The new ligand 2′-(3″,4″-methylene-dioxyphenyl)imidazo[4′,5′-f] [1,10]phenanthroline (mip) and its Ru(II) complexes [Ru(2,9-dmp)₂(mip)]²⁺ (1) (2,9-dmp = 2,9-dimethyl-1,10-phenanthrolline) and [Ru(4,7-dmp)₂(mip)]²⁺ (2) (4,7-dmp = 4,7-dimethyl-1,10-phenanthrolline) were synthesized and characterized. The binding properties of the two complexes to calf-thymus DNA (CT-DNA) were investigated by different spectrophotometric methods and viscosity measurements. Both 1 and 2 bind to CT-DNA in an intercalative mode, but with different binding strengths. Complex 2 can emit luminescence in the Tris buffer at ambient temperature, however, complex 1 showed no fluorescence emission, neither alone nor in the presence of CT-DNA. The circular-dichroism signal of the dialysate of the racemic complex against CT-DNA suggests that complexes 1 and 2 interact enantioselectively with CT-DNA. Furthermore, complexes 1 and 2 have been found to be an efficient photosensitiser for cracking DNA plasmid. Theoretical calculations for 1 and 2 were also carried out applying the density functional theory (DFT) method and applied to explain some obtained experimental observations.     

Synthesis,characterization, DNA-binding and DNA-photocleavage studies of [Ru(bpy)2(BPIP)] and [Ru(phen)2(BPIP)] (BPIP = 2-(4′-biphenyl)imidazo[4,5-f][1,10]phenanthroline)

New ligand 2-(4′-biphenyl)imidazo[4,5-f][1,10]phenanthroline (BPIP) and its complexes [Ru(bpy)₂(BPIP)]²⁺ (1) (bpy = 2,2′-bipyridine) and [Ru(phen)₂(BPIP)]²⁺ (2) (phen = 1,10-phenanthroline) have been synthesized and characterized by mass spectroscopy, ¹H NMR and cyclic voltammetry. The interaction of two Ru(II) complexes with calf thymus DNA (CT-DNA) was investigated by spectroscopic and viscosity measurements. Results indicate that both complexes bind to DNA via an intercalative mode and the DNA-binding affinity of complex 2 is much greater than that of complex 1. Furthermore, when irradiated at 365 nm, both complexes have also been found to promote the photocleavage of plasmid pBR 322 DNA.     

Synthesis, DNA-binding and photocleavage studies of [Ru(phen)2(pbtp)] and [Ru(bpy)2(pbtp)] (phen = 1,10-phenanthroline; bpy = 2,2′-bipyridine; pbtp = 4,5,9,11,14-pentaaza-benzo[b]triphenylene)

Based on the ligand dppz (dppz = dipyrido-[3,2-a:2′,3′-c]phenazine), a new ligand pbtp (pbtp = 4,5,9,11,14-pentaaza-benzo[b]triphenylene) and its polypyridyl ruthenium(II) complexes [Ru(phen)₂(pbtp)]²⁺ (1) (phen = 1,10-phenanthroline and [Ru(bpy)₂(pbtp)]²⁺ (2) (bpy = 2,2′-bipyridine) have been synthesized and characterized by elemental analysis, ES-MS and ¹H NMR spectroscopy. The DNA-binding of these complexes were investigated by spectroscopic methods and viscosity measurements. The experimental results indicate that both complexes 1 and 2 bind to CT-DNA in classical intercalation mode, and can enantioselectively interact with CT-DNA. It is interesting to note that the pbtp ruthenium(II) complexes, in contrast to the analogous dppz complexes, do not show fluorescent behavior when intercalated into DNA. When irradiated at 365 nm, both complexes promote the photocleavage of pBR 322 DNA.