Sugar sensing with synthetic multifunctional pores

Recently, synthetic multifunctional pores have been identified as "universal" detectors of chemical reactions. In this report, we show that with the assistance of enzymes as variable co-sensors, synthetic multifunctional pores can serve as similar universal sensors of variable components in mixed analytes. Sugar sensing in soft drinks is used to exemplify this new concept. This is achieved using invertase and hexokinase as co-sensors and a new synthetic multifunctional pore capable of discriminating between ATP and ADP in an "on-off" manner as sensor. The on-off discrimination between ATP as good and ADP as poor pore blocker is shown to be reasonably tolerant of changing experimental conditions. These results identify universal sensing with synthetic multifunctional pores as a robust, sensitive, and noninvasive method with appreciable promise for practical applications.     

Substrate-independent transduction of chromophore-free organic and biomolecular transformations into color

The concept of synthetic multifunctional pores as substrate-independent optical signal transducers of chemical reactions is introduced with emphasis on the combination with substrate-specific signal generation in biomolecular transformations. Comparison with the general electrochemical transduction, known from conventional biosensors, and the general optical transduction of analyte-specific biomolecular recognition (rather than transformation), known from immunosensing, reveals the fundamental nature of the concept as well as an attractive complementarity to existing methods. Examples with transferases, hydrolases, lyases, and even an isomerase demonstrate that optical transduction with synthetic multifunctional pores is general far beyond the substrate-specific signal generators of electrochemical transduction, that is, the oxidoreductases, and absolutely unproblematic. In part very recent breakthroughs are used to highlight the remarkable promise of synthetic multifunctional pores as optical transducers of biomolecular transformation with regard to practical sensing and screening applications.     

Synthetic multifunctional pores: lessons from rigid-rod beta-barrels

In this account, studies on synthetic multifunctional pores formed by rigid-rod beta-barrels are summarized comprehensively. The first section outlines the evolution of synthetic multifunctional pores from the introduction of rigid-rod molecules in bioorganic chemistry and the discovery of synthetic beta-barrels in comparison with pertinent developments in related areas of research. Design strategies to position active sites at the inner surface of rigid-rod beta-barrel pores are described in the second section. The third section focuses on the characteristics of transmembrane barrel-stave pores, emphasizing the dynamic nature of supramolecular oligomers with the aid of notional phase and energy diagrams. Section four introduces multifunctionality with the use of synthetic pores as hosts of a rich collection of guests, reaching from inorganic cations to organic macromolecules like peptides, oligonucleotides, polysaccharides and polyacetylenes. In section five, practical applicability of molecular recognition by synthetic multifunctional pores is documented with non-invasive fluorometric enzyme sensing. The application of host-guest chemistry within synthetic pores to couple molecular recognition and translocation with molecular transformation is the topic of section six. The last section mentions some perspectives and challenges with synthetic multifunctional pores.     

Synthetic multifunctional pores: deletion and inversion of anion/cation selectivity using pM and pH

We report the characterization of multifunctional rigid-rod beta-barrel ion channels with either internal aspartates or arginine-histidine dyads by planar bilayer conductance experiments. Barrels with internal aspartates form cation selective, large, unstable and ohmic barrel-stave (rather than toroidal) pores; addition of magnesium cations nearly deletes cation selectivity and increases single-channel stability. Barrels with internal arginine-histidine dyads form cation selective (PK/Pc1 = 2.1), small and ohmic ion channels with superb stability (single-channel lifetime > 20 seconds). Addition of "protons" results in inversion of anion/cation selectivity (Pc1-/Pk+ = 3.8); addition of an anionic guest (HPTS) results in the blockage of anion selective but not cation selective channels. These results suggest that specific, internal counterion immobilization, here magnesium (but not sodium or potassium) cations by internal aspartates and inorganic phosphates by internal arginines (but not histidines), provides access to synthetic multifunctional pores with attractive properties.     

Synthetic pores with sticky pi-clamps

In this report, we describe design, synthesis, evaluation and molecular dynamics simulations of synthetic multifunctional pores with pi-acidic naphthalenediimide clamps. Experimental evidence is provided for the formation of unstable but inert, heterogeneous and acid-insensitive dynamic tetrameric pores that are sensitive to base and ionic strength. Blockage experiments reveal that the introduction of aromatic electron donor-acceptor interactions provides access to the selective recognition of pi-basic intercalators within the pore. This breakthrough is important for the application of synthetic pores as multianalyte sensors.     

Interface engineering of synthetic pores: towards hypersensitive biosensors

Hydrophilic anchoring is introduced as a promising strategy to constructively control the various interactions of synthetic pore sensors with the surrounding biphasic environment. Artificial rigid-rod beta barrels are selected as classical synthetic multifunctional pores and random-coil tetralysines are attached as hydrophilic anchors. The synthesis of this advanced pore is accomplished in 32 steps from commercially available starting materials. With regard to pore activity as such, the key impact of hydrophilic anchoring is a change from a Hill coefficient n<1 to n=4. This change confirms successful suppression of the competing self-assembly with precipitation from the aqueous phase as the origin of the accomplished increase in pore activity. The hydrophilic anchors do not interfere with the blockage of the synthetic pore sensors by anionic analytes. In the case of stoichiometric binding of blockers (K(D)=EC(50) of the pore; EC(50)=concentration needed to observe 50 % pore activity), however, the increase in pore activity achieved by hydrophilic anchoring results in improved pore blockage under high dilution conditions. Controls confirm that this increase does not occur with analytes that do not exhibit stoichiometric binding (K(D)>EC(50)). These results not only reveal stoichiometric binding as the expected origin of the sensitivity limit of synthetic pore sensors, they also provide promising solutions for this problem. The combination of hydrophilic anchoring with targeted pore formation emerges as a particularly promising strategy to further reduce effective pore concentrations. The scope and limitations of this approach are exemplified with pertinent analyte pairs that are essential for the sensing of sucrose, lactose, acetate, and glutamate with synthetic pores in samples from the supermarket.     

The depth of molecular recognition: voltage-sensitive blockage of synthetic multifunctional pores with refined architecture

Voltage-sensitive blockage by ADP, ATP and phytate (IP6) demonstrates that active-site contraction toward the middle of newly synthesized rigid-rod beta-barrels provides a general strategy to rationally create and modulate the voltage sensitivity (and to increase the efficiency) of molecular recognition by synthetic multifunctional pores.     

Synthesis and photopolymerization kinetics of multifunctional aromatic urethane acrylates containing tertiary amine group

Two multifunctional aromatic urethane acrylates, based on 2, 4‐toluene diisocyanate (2, 4‐TDI), β‐hydroxyethyl arcylate (HEA), and synthetic multifunctional hydroxyl compounds, were synthesized by classical condensation reaction. FTIR was used to monitor the process of the reaction. The photopolymerization kinetics of the urethane acrylates with different photoinitiators was studied by Real‐Time Infrared Spectroscopy. The results indicated that different from the commercial urethane acrylate CN 975, the synthetic multifunctional urethane acrylates could be efficiently initiated by BP without the addition of any co‐initiators as they have tertiary amine structures. Copyright © 2008 John Wiley & Sons, Ltd.     

Optical response of mesoporous synthetic opals to the adsorption of chemical species

We have demonstrated the fabrication of a colloidal crystalline array (synthetic opal) from monodispersed mesoporous silica spheres (MMSS) and the control of its optical response simply by changing the amount of benzene vapor adsorbed into the pores of MMSS. It was revealed that the refractive index of the colloidal crystal of MMSS showed an 11.7% increase by taking advantage of benzene adsorption, and thereby, the structural color changed reversibly. We also conducted the same measurement on silica spheres without mesopores and observed no change in the refractive index or the structural color. This optical response gives rise to the possibility of using MMSS colloidal crystals not only for controlling light reflection but also as sensing devices based on color change due to vapor adsorption. We have also incorporated an organic dye, the porphyrin derivative alpha,beta,chi,delta,-tetrakis(1-methylpyridinium-4-yl)porphyrin rho-toluenesulfonate (TMPyP), into the pores of MMSS. By adopting an electrophoretic deposition process in ethanol, periodic arrays fabricated from TMPyP-MMSS conjugates with absolute zeta-potentials near zero were obtained. The Bragg diffraction peak of the colloidal crystalline array shifted to longer wavelengths due to an increase in the refractive index with increasing amounts of TMPyP adsorbed in the pores. The current work demonstrates the new possibility of creating colloidal crystals from MMSS with mesopores filled with various kinds of adsorbates to control the optical response effectively.     

Construction and activity of a synthetic basement membrane with active laminin peptides and polysaccharides

Cell-adhesive peptides derived from extracellular matrix (ECM) proteins are potential candidates for incorporating cell-binding activities into materials for tissue engineering. We have identified a number of cell adhesive peptides from laminins, which are major components of basement membrane ECM. Our goal is the development of synthetic basement membranes using the peptides on scaffolds. We review peptide–polysaccharide complexes, which were prepared by conjugation of the peptides to chitosan and alginate, and the biological activities of the resulting matrices. The peptide–polysaccharide matrices can also be used as a biomaterial for cell transplantation. These studies suggest that the peptide–polysaccharide complexes have the potential to mimic the multifunctional basement membrane and may be useful for tissue engineering.     

Thermodynamic and kinetic stability of synthetic multifunctional rigid-rod beta-barrel pores: evidence for supramolecular catalysis

The lessons learned from p-octiphenyl beta-barrel pores are applied to the rational design of synthetic multifunctional pore 1 that is unstable but inert, two characteristics proposed to be ideal for practical applications. Nonlinear dependence on monomer concentration provided direct evidence that pore 1 is tetrameric (n = 4.0), unstable, and "invisible," i.e., incompatible with structural studies by conventional methods. The long lifetime of high-conductance single pores in planar bilayers demonstrated that rigid-rod beta-barrel 1 is inert and large (d approximately 12 A). Multifunctionality of rigid-rod beta-barrel 1 was confirmed by adaptable blockage of pore host 1 with representative guests in planar (8-hydroxy-1,3,6-pyrenetrisulfonate, KD = 190 microM, n = 4.9) and spherical bilayers (poly-L-glutamate, KD < or = 105 nM, n = 1.0; adenosine triphosphate, KD = 240 microM, n = 2.0) and saturation kinetics for the esterolysis of a representative substrate (8-acetoxy-1,3,6-pyrenetrisulfonate, KM = 0.6 microM). The thermodynamic instability of rigid-rod beta-barrel 1 provided unprecedented access to experimental evidence for supramolecular catalysis (n = 3.7). Comparison of the obtained kcat = 0.03 min(-1) with the kcat approximately 0.18 min(-1) for stable analogues gave a global KD approximately 39 microM3 for supramolecular catalyst 1 with a monomer/barrel ratio approximately 20 under experimental conditions. The demonstrated "invisibility" of supramolecular multifunctionality identified molecular modeling as an attractive method to secure otherwise elusive insights into structure. The first molecular mechanics modeling (MacroModel, MMFF94) of multifunctional rigid-rod beta-barrel pore hosts 1 with internal 1,3,6-pyrenetrisulfonate guests is reported.     

Synthetic multifunctional pores with external and internal active sites for ligand gating and noncompetitive blockage

Design, synthesis, and multifunctionality of p-octiphenyl beta-barrel pores with external LRL triads and internal HH dyads are described. Molecular recognition of anionic fullerenes > calixarenes > pyrenes by guanidinium arrays at the outer pore surface is shown to result in pore opening, whereas alpha-helix recognition within the topologically matching internal space is shown to result in noncompetitive pore blockage. This experimental evidence for multifunctionality is supported by comparison with pertinent control pores and blockers, by structural studies using FRET from p-octiphenyl donors in the pore to BODIPY acceptors in the bilayer, and by molecular mechanics simulations. Practical usefulness of ligand-gated synthetic multifunctional pores is exemplified with the continuous detection of chemical processes.     

Boronic acid converters for reactive hydrazide amplifiers: polyphenol sensing in green tea with synthetic pores

Multicomponent sensing in complex matrices with synthetic pores became feasible with the introduction of amplifiers. Amplifiers are defined as molecules that can covalently capture undetectable analytes after enzymatic signal generation and drag them into the pore for transduction. Here, we introduce converters as molecules that can shift the reactivity of amplifiers in situ to capture chemoorthogonal analytes. For this purpose, a series of dialkoxynaphthalene (DAN) and dialkoxyanthracene (DAA) hydrazinoboronic acids was prepared in situ from DAN and DAA hydrazides and formylphenylboronic acids. These converted amplifiers efficiently inactivate synthetic pores with internal naphthalenediimide clamps. This pore inactivation by DAN and DAA hydrazinoboronic acids vanishes in the presence of catechols such as (+)-catechin, presumably because the obtained boronate esters are too large to bind within the synthetic beta-barrel pore or because they prefer to partition into the bilayer membrane. The resulting increase in pore activity with increasing catechol concentration at constant amplifier concentration is shown to be compatible with the sensing of polyphenols in green tea.     

Contact self-cleaning of synthetic gecko adhesive from polymer microfibers

Natural gecko toes covered by nanomicro structures can repeatedly adhere to surfaces without collecting dirt. Inspired by geckos, we fabricated a high-aspect-ratio fibrillar adhesive from a stiff polymer and demonstrated self-cleaning of the adhesive during contact with a surface. In contrast to a conventional pressure-sensitive adhesive (PSA), the contaminated synthetic fibrillar adhesive recovered about 33% of the shear adhesion of clean samples after multiple contacts with a clean, dry surface.     

On the Importance of Intermediate Internal Charge Repulsion for the Synthesis of Multifunctional Pores

Intermediate internal charge repulsion (ICR) is required to create synthetic pores with large, stable, transmembrane, and variably functionalized space. This conclusion is drawn from maximal transport and, in one case, catalytic activity of p‐octiphenyl β‐barrel pores with internal lysine, aspartate, and histidine residues around pH 7, 6, and 4.5, respectively. pK_a Simulations corroborate the experimental correlation of intermediate ICR with activity and suggest that insufficient ICR causes pore ‘implosion' and excess ICR pore ‘explosion'. Esterolysis experiments support the view that the formation of stable space within multifunctional p‐octiphenyl β‐barrels requires more ICR in bilayer membranes than in H₂O. Multivalency effects are thought to account for p‐octiphenyl β‐barrel expansion with increasing number of β‐sheets, and proximity effects for unchanged pH profiles with increasing β‐sheet length. Q‐TOF‐nano‐ESI‐MS barrel‐denaturation experiments indicate that contributions from internal counterion effects are not negligible. The overall characteristics of p‐octiphenyl β‐barrel pores with internal lysine, aspartate, and histidine residues, unlike de novo ‘α‐barrels' and similarly to certain biological channels, underscore the usefulness of rigid‐rod molecules to preorganize complex multifunctional supramolecular architecture.     

Compliance switching for adhesion control

Climbing lizards display numerous advanced features in their locomotion, notably a method to quickly switch between a state of low and high adhesive force capacity. Inspired by the gecko's adhesive switching, a method of mechanically switching between low and high adhesive states is reported. In particular, the first switching of an adhesive system using only a change in system compliance is demonstrated. Mechanical clamping and a novel magnetic clamping system are used to switch an iron/PDMS composite adhesive between a soft and rigid state. The switch in compliance directly influences the maximum load of the adhesive as measured in lap‐shear. Notably, contact area and the contact chemistry remain unaltered despite significant changes in force capacity. The demonstration of a compliance‐only switching mechanism has broad implications for understanding natural adhesive systems—especially in organisms that can dynamically alter their rigidity (e.g. cells). © 2014 Wiley Periodicals, Inc. J. Polym. Sci., Part B: Polym. Phys. 2015 , 53, 48–57     

Shear adhesion strength of thermoplastic gecko-inspired synthetic adhesive exceeds material limits

Natural gecko array wearless dynamic friction has recently been reported for 30,000 cycles on a smooth substrate. Following these findings, stiff polymer gecko-inspired synthetic adhesives have been proposed for high-cycle applications such as robot feet. Here we examine the behavior of high-density polyethylene (HDPE) and polypropylene (PP) microfiber arrays during repeated cycles of engagement on a glass surface, with a normal preload of less than 40 kPa. We find that fiber arrays maintained 54% of the original shear stress of 300 kPa after 10,000 cycles, despite showing a marked plastic deformation of fiber tips. This deformation could be due to shear-induced plastic creep of the fiber tips from high adhesion forces, adhesive wear, or thermal effects. We hypothesize that a fundamental material limit has been reached for these fiber arrays and that future gecko synthetic adhesive designs must take into account the high adhesive forces generated to avoid damage. Although the synthetic material and natural gecko arrays have a similar elastic modulus, the synthetic material does not show the same wear-free dynamic friction as the gecko.     

Excluded volume effects in macromolecular forces and ion-interface interactions

A charged Yukawa liquid confined in a slit nanopore is studied in order to understand excluded volume effects in the interaction force between the pore walls. A previously developed self-consistent scheme [S. Buyukdagli, C. V. Achim, and T. Ala-Nissila, J. Stat. Mech. 2011, P05033] and a new simpler variational procedure that self-consistently couple image forces, surface charge induced electric field, and pore modified core interactions are used to this aim. For neutral pores, it is shown that with increasing pore size, the theory predicts a transition of the interplate pressure from an attractive to a strongly repulsive regime associated with an ionic packing state, an effect observed in previous Monte Carlo simulations for hard core charges. We also establish the mean-field theory of the model and show that for dielectrically homogeneous pores, the mean-field regime of the interaction between the walls corresponds to large pores of size d > 4 ?. The role of the range of core interactions in the ionic rejection and interplate pressure is thoroughly analyzed. We show that the physics of the system can be split into two screening regimes. The ionic packing effect takes place in the regime of moderately screened core interactions characterized with the bare screening parameter of the Yukawa potential b ? 3/l(B), where l(B) is the Bjerrum length. In the second regime of strongly screened core interactions b ? 3/l(B), solvation forces associated with these interactions positively contribute to the ionic rejection driven by electrostatic forces and enhance the magnitude of the attractive pressure. For weakly charged pores without a dielectric discontinuity, core interactions make a net repulsive contribution to the interplate force and also result in oscillatory pressure curves, whereas for intermediate surface charges, these interactions exclusively strengthen the external pressure, thereby reducing the magnitude of the net repulsive interplate force. The pronounced dependence of the interplate pressure and ionic partition coefficients on the magnitude and the range of core interactions indicates excluded volume effects as an important ion specificity and a non-negligible ingredient for the stability of macromolecules in electrolyte solutions.     

Synthesis of ultraviolet curable encapsulating adhesives and their package applications for organic optoelectronic devices

With conventional heating process, ultraviolet (UV) illumination, and microwave irradiation, we have successfully synthesized UV curable encapsulating adhesives with excellent gas barrier capabilities, good adhesive strength, moderate hardness, and high refractive indices. The experimental results manifest that the physical properties of lab-made encapsulating adhesives are highly dependent on their chemical structures and synthetic procedure. We also discover that the encapsulating adhesive prepared by microwave irradiation (i.e. encapsulating adhesive VI-MW) exhibits better adhesive strength and higher gas resistance than those prepared by conventional heating process and UV illumination. Furthermore, encapsulating adhesive VI-MW has also been applied for the package of organic light emitting diodes (OLEDs), flexible OLEDs, and organic solar cells. With encapsulating adhesive VI-MW, the entry of oxygen and moisture in the air into these organic optoelectronic devices has been blocked, therefore enhancing the lifetimes.