Effects of thermal denaturation on the longitudinal relaxation time (T1) of water protons in protein solutions: study of the factors determining the T1 of water protons

The factors determining the longitudinal relaxation time (T1) of water protons in protein solutions were investigated by analyzing the effects of thermal denaturation on the T1 of the water protons. We treated the water protons and the protein protons "on a protein surface" as a dipole-dipole coupled two-spin system where relative translational diffusion is the dominant mechanism, and measured the change in the time development of the nuclear Overhauser effect (NOE) factors of the water protons. The T1 of the water protons was shortened markedly when the proteins were thermally denatured. Our analysis indicates that this relaxation enhancement is due to an increase in the value of the translational correlation time as well as the fraction of hydration water molecules, though the influence of "proton exchange" between the water protons and the labile protein protons cannot be completely neglected.     

Residue-specific NH exchange rates studied by NMR diffusion experiments

We present a novel approach to the investigation of rapid (>2s(-1)) NH exchange rates in proteins, based on residue-specific diffusion measurements. (1)H, (15)N-DOSY-HSQC spectra are recorded in order to observe resolved amide proton signals for most residues of the protein. Human ubiquitin was used to demonstrate the proposed method. Exchange rates are derived directly from the decay data of the diffusion experiment by applying a model deduced from the assumption of a two-site exchange with water and the "pure" diffusion coefficients of water and protein. The "pure" diffusion coefficient of the protein is determined in an experiment with selective excitation of the amide protons in order to suppress the influence of magnetization transfer from water to amide protons on the decay data. For rapidly exchanging residues a comparison of our results with the exchange rates obtained in a MEXICO experiment showed good agreement. Molecular dynamics (MD) and quantum mechanical calculations were performed to find molecular parameters correlating with the exchangeability of the NH protons. The RMS fluctuations of the amide protons, obtained from the MD simulations, together with the NH coupling constants provide a bilinear model which shows a good correlation with the experimental NH exchange rates.     

Relaxation of protons by radicals in rotationally immobilized proteins

Proton spin-lattice relaxation by paramagnetic centers may be dramatically enhanced if the paramagnetic center is rotationally immobilized in the magnetic field. The details of the relaxation mechanism are different from those appropriate to solutions of paramagnetic relaxation agents. We report here large enhancements in the proton spin-lattice relaxation rate constants associated with organic radicals when the radical system is rigidly connected with a rotationally immobilized macromolecular matrix such as a dry protein or a cross-linked protein gel. The paramagnetic contribution to the protein-proton population is direct and distributed internally among the protein protons by efficient spin diffusion. In the case of a cross-linked-protein gel, the paramagnetic effects are carried to the water spins indirectly by chemical exchange mechanisms involving water molecule exchange with rare long-lived water molecule binding sites on the immobilized protein and proton exchange. The dramatic increase in the efficiency of spin relaxation by organic radicals compared with metal systems at low magnetic field strengths results because the electron relaxation time of the radical is orders of magnitude larger than that for metal systems. This gain in relaxation efficiency provides completely new opportunities for the design of spin-lattice relaxation based contrast agents in magnetic imaging and also provides new ways to examine intramolecular protein dynamics.     

Concentration Dependence of NMR T1 in Agar Solutions

In this study, in order to explain solvent proton relaxation mechanism, the spin-lattice relaxation time (T1) of agar solutions was measured as a function of agar concentration. Relaxation measurements were carried out by a FT-NMR spectrometer operating at 60 MHz and inversion recovery pulse squence was used. Relaxation rate(1/T1a) was linearly proportional to concentration of agar solution (C), and the T1 mechanism of solvent water protons in agar solutions should be caused by the chemical exchange of water protons between free and bound water.     

Concentration Dependence of NMR T1 in Agar Solutions

In this study, in order to explain solvent proton relaxation mechanism, the spin-lattice relaxation time (T1) of agar solutions was measured as a function of agar concentration. Relaxation measurements were carried out by a FT-NMR spectrometer operating at 60 MHz and inversion recovery pulse squence was used. Relaxation rate(1/T1a) was linearly proportional to concentration of agar solution (C), and the T1 mechanism of solvent water protons in agar solutions should be caused by the chemical exchange of water protons between free and bound water.     

Proton N.M.R. studies of chemical and diffusive exchange in carbohydrate systems

A computer-simulated stochastic model is developed capable of predicting the combined effects of chemical and diffusive exchange on the transverse relaxation of spin-1/2 nuclei in a heterogeneous system. Comparison is first made with previous analytical theories for the special case of two site chemical exchange in a homogeneous system and the experimental data on several homogeneous aqueous carbohydrate systems are analysed. Results show that transverse water proton relaxation in these systems is dominated by proton exchange between water and carbohydrate hydroxyl groups. Analysis of model heterogeneous carbohydrate systems shows that in addition to chemical exchange, diffusion coefficients, particle morphology and local magnetic field gradients all have a role to play in determining the proton relaxation behaviour.     

The effect of ultrasound treatment on the interaction of brine with pork meat proteins

The objective of the study is to elucidate the effect of ultrasound treated salt solution on curing of pork meat. The interactions of salt (NaCl) solutions of 3 and 25% with the proteins of pork meat are studied. High intensity ultrasound operating at 20 kHz was used. The differential scanning calorimetry (DSC), NMR spin-spin relaxation time, unfrozen water and water diffusion coefficient measurements were carried out in meat cured with ultrasound treated and untreated salt solutions. The effect of ultrasonication was most evident from measured spin-spin relaxation times T₂₁, the rate of chemical exchange of water protons k and the amount of unfrozen water W_unf in the meat. The measured diffusion coefficient of water D_w in meat cured with ultrasound treated and control salt solution did not show significant difference. The nuclear magnetic resonance (NMR) relaxation data, differential scanning calorimetry (DSC) and the diffusion coefficient data reliably show that the possible action of ultrasound to salt solution was manifested on the first 2 days of the experiment with a 3% salt solution.     

The line shapes of the water proton resonances of red blood cells containing carbonyl hemoglobin, deoxyhemoglobin, and methemoglobin: implications for the interpretation of proton MRI at fields of 1.5 T and below

The 300 MHz (7 T) water proton resonances of suspensions of red blood cells containing paramagnetic deoxyhemoglobin or methemoglobin can be resolved into two broad lines assignable to intra- and extracellular water which undergoes rapid T2 relaxation by diffusion in magnetic field gradients induced by the intracellular paramagnets. The width of the resolved lines allowed an estimate of the maximum contribution that diffusion makes to T2 relaxation at 7 T. The dependence of the diffusion contribution on the square of the strength of the static magnetic field suggest that diffusion makes a small contribution to water proton T2 relaxation at 1.5 T compared to 7 T, and a negligible one at 0.5 T in early and intermediate hematomas containing deoxyhemoglobin or methemoglobin in intact red blood cells. At the lower field strengths, water proton T2 relaxation is apparently dominated by the rapid chemical exchange (mean lifetime tau = 10 msec) between the intra- and extracellular environments.     

表面活性剂CTAB水溶液中的T2弛豫分散研究

用CPMG脉冲序列测定了表面活性剂十六烷基三甲基溴化铵（CTAB）分子中的氮甲基(N-CH₃)质子的横向弛豫时间（T₂表观）,并发现测得的T₂表观\}与序列中的重聚脉冲间隔时间的一半τ _cp有关,说明存在横向弛豫分散现象. 当在τ_cp≤1 ms时,T₂表观与τ²_cp}呈线性关系;而当τ_cp≥4.6 ms时,T₂表观变得与τ_cp无关. 利用Luz-Meiboom两体化学交换模型计算了不同浓度的CTAB溶液中的N-CH₃质子的本征横向弛豫时间（T₂本征）和化学交换速率k_ex,发现k_ex与T₂本征和自扩散系数D一样,在临界胶束浓度（CMC）附近发生突变. 这个突变反映了CTAB分子在从单体到胶束的转变过程中其动力学特性发生了改变.      

Multicomponent water proton transverse relaxation and T2-discriminated water diffusion in myelinated and nonmyelinated nerve

The influence of compartmental boundaries on water proton transverse relaxation and diffusion measurements was investigated in three distinct excised nerves, namely, the non-myelinated olfactory nerve, the Schwann cell myelinated trigeminal nerve, and the oligodendrocyte myelinated optic nerve of the garfish. The transverse relaxation decay curves were multiexponential and their decomposition yielded three primary components with T₂ values 30–50, 150, and 500 ms, which were subsequently assigned to water protons in the myelin, axoplasm, and interaxonal compartments. The short T₂ component was absent in the non-myelinated olfactory nerve, but present in both myelinated nerves and thus provides supporting evidence for the use of quantitative T₂ measurements to measure the degree of myelination. The signal contribution of each T₂ component to the apparent diffusion coefficient measurements was varied by incrementing the spin-echo time with a preparatory CPMG train of radiofrequency pulses. The apparent diffusion coefficient and its anisotropy were shown to be independent of the spin-echo time over the range of 70 to 450 ms.     

Chemical exchange of hydroxyl protons in quercetin measured by pulsed field gradient NMR

The diffusion behavior of hydroxyl protons (OH) in quercetin in 100% DMSO-d₆ (deuterium dimethylsulfoxide) and a 90% DMSO-d₆ solution containing 10% H₂O was investigated with 600 MHz ¹H pulsed field gradient (PFG) nuclear magnetic resonance (NMR). Only resonances of the 5-hydroxyl protons (OH5) were well resolved in NMR spectra of quercetin for all solutions under study. This phenomenon is explained by the intramolecular hydrogen bonding between OH5 protons and the 4-carbonyl oxygen (CO4). During diffusion experiments, the OH5 protons showed a biexponential diffusion decay, indicating an exchange process with water. As water content in the solvents increased, the lifetime (τ _q) of the OH5 protons decreased from 96.7±10.0 ms in 100% DMSO-d₆ to 14.3±1.4 ms in the 90% DMSO-d₆ solution containing 10% H₂O, indicating an increase in the exchange rate (k _q = l/τ _q) of the OH5 protons. This study demonstrates that the diffusion approach with PFG-NMR is much faster and easier for estimating the short lifetime or fast exchange rate of hydroxyl protons in quercetin.     

Cesium adsorption in hydrated iron oxide particles suspensions: an NMR study

137Cs is an important component of nuclear waste which may pollute water. Its migration in natural environments is slowed down by adsorption on minerals. Cesium adsorption on akaganeite (beta-FeOOH) particles, dextran-coated ferrihydrite (5 Fe(2)O(3)-9H(2)O) particles, and ferritin in aqueous solutions is studied with (133)Cs nuclear magnetic resonance measurements. The longitudinal relaxation time (T(1)) of (133)Cs in the presence of such magnetic particles depends on whether the ions bind to the particle or not. T(1) of (133)Cs ions in aqueous solutions containing the same amount of magnetized particles will not depend on cesium concentration if relaxation is governed by diffusion (when cesium is not able to bind), but it will depend on cesium concentration if exchange governs relaxation (when cesium is able to bind). The method is successfully tested using TEMPO, a nitroxide stable free radical whose relaxation is due to diffusion. (133)Cs relaxation in solutions of ferritin, akaganeite, and dextran-coated ferrihydrite particles is found to result from a cationic exchange of cesium ions between particles surface and bulk ions, owing to adsorption. The effect of pH on (133)Cs relaxation in solutions of the particles is consistent with the adsorption properties of cations on hydrated iron oxides.     

The influence of chemical and diffusive exchange on water proton transverse relaxation in plant tissues

Transverse water proton relaxation in parenchyma tissue of courgette, onion and apple shows a dependence on CPMG pulse spacing characteristic of each tissue. An analysis of this dependence suggests that transverse relaxation in these tissues is caused by various combinations of fast proton exchange between water and cell biopolymers (or solutes) and diffusion through internally generated magnetic field gradients. Diffusion between intra- and extracellular water compartments also averages the water proton signal to an extent that depends on cell morphology and membrane permeability and this is calculated using a two-compartment model. No recourse need be made to popular concepts such as exchange between free and "bound" water. The implications of our results for NMR image contrast are discussed.     

Anomalous surface diffusion of water compared to aprotic liquids in nanopores

1H nuclear magnetic relaxation dispersion experiments show remarkable differences between water and acetone in contact with microporous glass surfaces containing trace paramagnetic impurities. Analyzed with surface relaxation theory on a model porous system, the data obtained for water show that proton surface diffusion limited by chemical exchange with the bulk phase permits long-range effectively one-dimensional exploration along the pores. This magnetic-field dependence coupled with the anomalous temperature dependence of the relaxation rates permits a direct interpretation in terms of the proton translational diffusion coefficient at the surface of the pores. A universal rescaling applied to these data collected for different pore sizes and on a large variety of frequencies and temperatures, supports this interpretation. The analysis demonstrates that acetone diffuses more slowly, which increases the apparent confinement and results in a two-dimensional model for the molecular dynamics close to surface relaxation sinks. Surface-enhanced water proton diffusion, however, permits the proton to explore a greater spatial extent of the pore, which results in an apparent one-dimensional model for the diffusive motions of the water that dominate nuclear spin relaxation.     

High-Speed Magic-Angle SpinningC MAS NMR Spectra of Adamantane: Self-Decoupling of the Heteronuclear Scalar Interaction and Proton Spin Diffusion

We have investigated the carbon line shape of solid adamantane under high-speed magic-angle sample spinning (MAS) acquired without proton decoupling. The CH-group shows a spinning-speed-dependent line broadening while the CH₂-group consists of a spinning-speed-independent sharp component and a spinning-speed-dependent broader part. These phenomena can be explained by self-decoupling of theJ-interaction due to proton spin diffusion. Such a self-decoupling process can be described by a magnetization exchange process between the multiplet lines. Changing the spin-diffusion rate constant by off-resonance irradiation of the protons allows us to observe the full range from slow exchange to coalescence to fast exchange of the carbon spectra. One of the multiplet components in the CH₂-group corresponds to a group spin of the protons of zero and therefore does not couple to the other protons. This gives rise to the sharp central line. The magnetization exchange rate constant between the different multiplet lines can be determined from the spectra and is a measure for the spinning-speed-dependent proton spin-diffusion rate constant. Even at an MAS speed of 30 kHz, proton spin diffusion is still observable despite the relatively weak intermolecular proton dipolar-coupling network in adamantane which results in a static proton line width of only 14 kHz (full width at half height).     

NMR Water Proton T1 Mechanism in Blood Diluted by its Own Plasma

The water proton T1 in human blood diluted by its own plasma was measured with a FT-NMR spectrometer operating at 60MHz for protons. A linear relationship (with a correlation of 0.99) was found between the 1/T1 and hemoglobin content(Hb) in the blood. The exchange of water between the extracellular plasma and the intracellular Hb in blood is known to satisfy the fast chemical exchange conditions, and the decay of magnetization in blood is reported to have a single exponential. Therefore, the obtained relationship should represent fast chemfcal intracellular Hb and the extrace exchange between the lular plasma.     

Decay phase of energetic electrons and protons in solar cosmic ray events

The decay phase of solar energetic particle (proton and electron) events is considered. The propagation mechanisms for particles of different kind may differ in the same events, which should manifest itself in the pecularities of their decay phases. To compare the propagation parameters of protons and electrons, we used the data of simultaneous measurements of few-MeV proton and few-hundred-keV electron fluxes from IMP-8 CPME and SOHO COSTEP. Nearly half of clear-shaped simultaneously measured electron and proton decays have similar character (exponential or power-law), suggesting that at least in a part of events electrons can be subjected to the same propagation mechanisms as protons.     

NMR relaxometry and imaging of water absorbed in biodegradable polymer scaffolds

Porous substrates made of poly(3-hydroxybutyrate-3-hydroxyvalerate) (PHBHV) were prepared by a particulate leaching method. After removing the salt by extraction in water, proton nuclear magnetic resonance (NMR) relaxometry and imaging were performed on sets of PHBHV substrates immersed in phosphate-buffered solution during 3 months at different time points. Polarized optical microscopy studies were performed on thin sections, 25 and 5 mum, of the PHBHV samples. The results of NMR relaxometry showed two (1)H nuclei populations, well distinguishable on the free induction decay (FID), due to the different decay time constants, a factor of 10(2) apart. Thus, it was possible to separate the two populations, giving separate distributions of T(1) relaxation times. One population could be associated with water protons in the pores and the other to macromolecular protons. The distributions of T(1) and T(2) of the water proton shifted to lower values with increasing immersion time to a constant value after 30 days. The results obtained by NMR imaging showed an initial increase in the apparent porosity, reaching a plateau after 25 days of immersion. This increase is attributed mainly to the absorption of water in the microporosity as supported by the results of the relaxometry measurements and shown by scanning electron microscopy. The average porosity measured by NMR imaging at the plateau, 78+/-3%, is slightly higher than that determined by optical microscopy, 73+/-9%, which may be due to the fact that the latter method did not resolve the microporosity. Overall, the results suggest that at early stages after immersing the scaffolds in the aqueous medium, first 30 days approximately, NMR imaging could underestimate the porosity of the substrate.     

The dipolar and exchange contributions to the spin-lattice relaxation of the imino protons in poly(rA)· poly(rU)

Selective, semiselective, and biselective excitation has been used to study the spin-lattice relaxation of the hydrogen-bonded imino protons in the sonicated, double-stranded RNA polymer poly(rA)· poly(rU). The spin-lattice relaxation of the imino protons has contributions from both dipolar interactions and exchange with the solvent, and the relative contribution of each to the observed rate depends on temperature. When exchange is slow compared to the dipolar contribution, the two components can be resolved by measuring the relaxation rate with and without prior inversion of the solvent peak. When exchange is fast, the contributions can be resolved by comparing the initial selective relaxation rate with the rate of saturation transfer when the solvent peak is inverted. This allows the exchange and dipolar contributions to be separated at temperatures well below the duplex melting temperatures and provides an easy way to study the mechanism of proton exchange with the solvent.