Investigating the formation of an adduct of formamide with dioxane by means of Raman spectroscopy

Raman experiments of formamide (FA) and p‐dioxane (DX) mixtures at different compositions were carried out. A red shift of the C O stretching band of DX was observed upon dilution, while blue shifts were observed for the C H stretching and C O C bending bands. In this latter region, the new band at ∼441 cm⁻¹, whose intensity shows large dependence on the FA concentration, has been assigned to an FA–DX adduct and it is reported for the first time in the literature. The spectral changes observed in the C O C bending region allowed to determine a proportion of 4:1 FA–DX and this experimental evidence is also presented for the first time by Raman spectroscopy. The present work shows an excellent agreement with our previous investigation, where the 2:1 FA—THF (tetrahydrofuran) adduct was characterized. Copyright © 2008 John Wiley & Sons, Ltd.     

Acid–base interactions between formamide and tetrahydrofuran molecules: Raman investigation of speciation in a binary system of biological interest

Raman spectra of formamide (FA) and tetrahydrofuran (THF) mixtures at different compositions were obtained. The appearance of new bands at 897 and 1612 cm⁻¹, whose intensities show large dependence on the FA concentration, are assigned to an FA–THF adduct. This assignment is supported by the Lewis acid–base theory, where the two H‐bond donor sites of FA and the strong donor character of THF became the environment propitious for the donor‐acceptor reaction. Quantitative measurements performed in the band envelope at ∼915 cm⁻¹ allowed to determine the stoichiometry of the Lewis acid–base adduct. The experimental evidence of the 2:1 FA–THF adduct is presented for the first time using Raman spectroscopy and our results show an excellent agreement with similar systems. The present work also shows hydrogen interactions which can be involved in systems containing peptide groups and constituents of nucleic acids. Copyright © 2008 John Wiley & Sons, Ltd.     

FT‐Raman,FTIR and density functional theory studies of a hydrogen‐bonded formamide:pyridine complex

Raman and IR experiments have been carried out on formamide (FA) and pyridine (Py) mixtures at different compositions. The appearance of a new Raman band at 996 cm⁻¹ (ν₁ region of Py), whose intensity depends on the FA concentration, is assigned to an FA:Py adduct and this result is in excellent agreement with those of other authors who employed noisy light‐based coherent Raman scattering spectroscopy (I⁽²⁾ CARS). Another band at 1587 cm⁻¹ (ν₈ region of Py) has been observed for the first time by using Raman and IR spectroscopies. Its intensity shows the same dependence on the FA concentration and this fact allows us to also attribute it to an FA:Py adduct. The good relationship between the Raman and IR data demonstrates the potential of the vibrational spectroscopy for this kind of study. Owing to higher absolute Raman scattering cross section, the ν₁ region of Py has been chosen for the quantitative analysis and a stoichiometry of 1:1 FA:Py is reported. The experimental data are very well supported by the density functional theory (DFT) calculation, which was employed for the first time to the present system. Furthermore, the actual investigation shows an excellent agreement with those reported from computational calculations for similar systems. A comparison with our previous studies confirms that the solvent dielectric constant determines the stoichiometry of a given Lewis acid–base adduct in the infinite dilution limit. Copyright © 2009 John Wiley & Sons, Ltd.     

Vibrational properties of levulinic acid and furan derivatives: Raman spectroscopy and theoretical calculations

In this work, the Raman spectra of furan, furfuryl alcohol (FA), furfural, hydroxymethylfurfural (HMF), and levulinic acid were obtained in the 500 to 4000 cm⁻¹ spectral region at room temperature. Vibrational wavenumbers were calculated for these compounds with the B3LYP method using the 6‐31 + G(2df,p) basis set. The experimentally determined CC and C C wavenumbers for furan and furan derivatives were in good agreement with the calculated wavenumbers without scaling factor, while the calculated CO and C H wavenumbers at ∼1660 and 3000 cm⁻¹, respectively, showed larger deviations from the measured ones. The Raman spectra for furan and furan derivatives showed intense CC bands, whereas the levulinic acid spectrum showed intense C H vibrations with broad doublet CO bands. We also found that an empirical method based on the chemical structure similarities is able to predict the HMF Raman spectrum from the combined furfural and FA spectra. Copyright © 2011 John Wiley & Sons, Ltd.     

Electrical properties of DX centers in GaAs and AlGaAs

Abstract

The DX center, the lowest energy state of the donor in AIGaAs with x < 0.22, is responsible for the reduced conductivity as well as the persistent photoconductivity observed in this material at low temperature. Extensive studies of the properties of this deep level in Si-doped AIGaAs are reviewed here. Data are presented showing that the characteristics of the DX center remain essentially unchanged when it is resonant with the conduction band (x < 0.22) and that, independent of other compensation mechanisms, the DX center therefore limits the free carrier concentration in Si-doped GaAs to a maximum of about 2 × 10¹⁹ cm^?3. Recent measurements suggesting that the lattice relaxation involves the motion of the Si atom from the substitutional site toward an interstitial site are also presented. Evidence for the negative U model, that the DX level is the two electron state of the substitutional donor, is discussed.     

Diffusion tensor magnetic resonance imaging of the normal breast

Purpose

The objective of this study was to evaluate diffusion anisotropy of the breast parenchyma and assess the range and repeatability of diffusion tensor imaging (DTI) parameters in normal breast tissue.

Materials and Methods

The study was approved by our institutional review board and included 12 healthy females (median age, 36 years). Diffusion tensor imaging was performed at 1.5 T using a diffusion-weighted echo planar imaging sequence. Diffusion tensor imaging parameters including tensor eigenvalues (λ₁, λ₂, λ₃), fractional anisotropy (FA) and apparent diffusion coefficient (ADC) were measured for anterior, central and posterior breast regions.

Results

Mean normal breast DTI measures were λ₁=2.51×10⁻³ mm²/s, λ₂=1.89×10⁻³ mm²/s, λ₃=1.39×10⁻³ mm²/s, ADC=1.95±0.24×10⁻³ mm²/s and FA=0.29±0.05 for b=600 s/mm². Significant regional differences were observed for both FA and ADC (P<.05), with higher ADC in the central breast and higher FA in the posterior breast. Comparison of DTI values calculated using b=0, 600 s/mm² vs. b=0, 1000 s/mm², showed significant differences in ADC (P<.001), but not FA. Repeatability assessment produced within-subject coefficient of variations of 4.5% for ADC and 11.4% for FA measures.

Conclusion

This study demonstrates anisotropy of water diffusion in normal breast tissue and establishes a normative range of breast FA values. Attention to the influence of breast region and b value on breast DTI measurements may be important for clinical interpretation and standardization of techniques.     

Characterization of sodium alginate and its block fractions by surface‐enhanced Raman spectroscopy

The surface‐enhanced Raman scattering (SERS) of sodium alginates and their hetero‐ and homopolymeric fractions obtained from four seaweeds of the Chilean coast was studied. Alginic acid is a copolymer of β‐D ‐mannuronic acid (M) and α‐L guluronic acid (G), linked 1 → 4, forming two homopolymeric fractions (MM and GG) and a heteropolymeric fraction (MG). The SERS spectra were registered on silver colloid with the 632.8 nm line of a He Ne laser. The SERS spectra of sodium alginate and the polyguluronate fraction present various carboxylate bands which are probably due to the coexistence of different molecular conformations. SERS allows to differentiate the hetero‐ and homopolymeric fractions of alginic acid by characteristic bands. In the fingerprint region, all the poly‐D ‐mannuronate samples present a band around 946 cm⁻¹ assigned to C O stretching, and C C H and C O H deformation vibrations, a band at 863 cm⁻¹ assigned to deformation vibration of β‐C₁ H group, and one at 799–788 cm⁻¹ due to the contributions of various vibration modes. Poly‐L ‐guluronate spectra show three characteristic bands, at 928–913 cm⁻¹ assigned to symmetric stretching vibration of C O C group, at 890–889 cm⁻¹ due to C C H, skeletal C C, and C O vibrations, and at 797 cm⁻¹ assigned to α C₁ H deformation vibration. The heteropolymeric fractions present two characteristic bands in the region with the more important one being an intense band at 730 cm⁻¹ due to ring breathing vibration mode. Copyright © 2009 John Wiley & Sons, Ltd.     

Food additives characterization by infrared,Raman, and surface‐enhanced Raman spectroscopies

Fourier‐transform infrared (FT‐IR), Raman (RS), and surface‐enhanced Raman scattering (SERS) spectra of β‐hydroxy‐β‐methylobutanoic acid (HMB), L ‐carnitine, and N‐methylglycocyamine (creatine) have been measured. The SERS spectra have been taken from species adsorbed on a colloidal silver surface. The respective FT‐IR and RS band assignments (solid‐state samples) based on the literature data have been proposed. The strongest absorptions in the FT‐IR spectrum of creatine are observed at 1398, 1615, and 1699 cm⁻¹, which are due to ν_s(COOH) + ν(CN) + δ(CN), ρ_s(NH₂), and ν(C O) modes, respectively, whereas those of L ‐carnitine (at 1396/1586 cm⁻¹ and 1480 cm⁻¹) and HMB (at 1405/1555/1585 cm⁻¹ and 1437–1473 cm⁻¹) are associated with carboxyl and methyl/methylene group vibrations, respectively. On the other hand, the strongest bands in the RS spectrum of HMB observed at 748/1442/1462 cm⁻¹ and 1408 cm⁻¹ are due to methyl/methylene deformations and carboxyl group vibrations, respectively. The strongest Raman band of creatine at 831 cm⁻¹ (ρ_w(R NH₂)) is accompanied by two weaker bands at 1054 and 1397 cm⁻¹ due to ν(CN) + ν(R NH₂) and ν_s(COOH) + ν(CN) + δ(CN) modes, respectively. In the case of L ‐carnitine, its RS spectrum is dominated by bands at 772 and 1461 cm⁻¹ assigned to ρ_r(CH₂) and δ(CH₃), respectively. The analysis of the SERS spectra shows that HMB interacts with the silver surface mainly through the  COO⁻, hydroxyl, and  CH₂ groups, whereas L ‐carnitine binds to the surface via  COO⁻ and  N⁺(CH₃)₃ which is rarely enhanced at pH = 8.3. On the other hand, it seems that creatine binds weakly to the silver surface mainly by  NH₂, and C O from the  COO⁻ group. Copyright © 2006 John Wiley & Sons, Ltd.     

Adsorbed states of substituted α‐aminophosphinic acids on a silver electrode surface: comparison with a colloidal silver substrate

We investigated the interfacial structures of various aromatic (each compound contains one or two phenyls) di‐α‐amino ( L¹ – L³ ) and α‐amino‐α‐hydroxyphosphinic ( L⁴ – L⁶ ) acids immobilized onto an electrochemically roughened silver electrode surface in an aqueous solution using surface‐enhanced Raman scattering (SERS). These structures were compared to those on a colloidal silver surface to determine the relationship between adsorption strength and geometry. The presence of an enhanced ν_19a ring band in the SERS spectra of L⁶ , L² , and L³ on the electrode indicated that the benzene rings of those molecules interact with the electrode surface through localized CC bond(s). We observed significant band broadening of the benzene ring modes for all α‐hydroxyphosphinic acids on both substrates, except for L¹ deposited onto the electrode surface. This suggests the possibility of direct interaction between the ring and Ag, although the benzene ring–surface π overlap is weaker for the colloidal silver than for the Ag electrode. The downward shift in wavenumber and alternations in the enhancement of a ν₁₂ ring band indicate a general increase of tilt angle on both silver substrates in the order L³ < L⁴ < L⁵ < L⁶ . The altered enhancement of the bands due to the vibrations of the  NH₂ and O PO fragments, a finding observed on both silver substrates, strongly suggests that the groups interact with different strength and geometry with these substrates. Copyright © 2009 John Wiley & Sons, Ltd.     

Raman and infrared study of phyllosilicates containing heavy metals (Sb,Bi): bismutoferrite and chapmanite

The kaolinite‐like phyllosilicate minerals bismutoferrite BiFe³⁺₂Si₂O₈(OH) and chapmanite SbFe³⁺₂Si₂O₈(OH) have been studied by Raman spectroscopy and complemented with infrared spectra. Tentatively interpreted spectra were related to their molecular structure. The antisymmetric and symmetric stretching vibrations of the Si O Si bridges, δ SiOSi and δ OSiO bending vibrations, ν (Si O_terminal)⁻ stretching vibrations, ν OH stretching vibrations of hydroxyl ions, and δ OH bending vibrations were attributed to the observed bands. Infrared bands in the range 3289–3470 cm⁻¹ and Raman bands in the range 1590–1667 cm⁻¹ were assigned to adsorbed water. O H···O hydrogen‐bond lengths were calculated from the Raman and infrared spectra. Copyright © 2009 John Wiley & Sons, Ltd.     

High‐pressure studies of the micro‐Raman spectra of iron cyanide complexes: Prussian blue (Fe4[Fe(CN)6]3), potassium ferricyanide (K3[Fe(CN)6]), and sodium nitroprusside (Na2[Fe(CN)5(NO)]·2H2O)

The pressure dependences of the peaks observed in the micro‐Raman spectra of Prussian blue (Fe₄[Fe(CN)₆]₃), potassium ferricyanide (K₃[Fe(CN)₆]), and sodium nitroprusside (Na₂[Fe(CN)₅(NO)]·2H₂O) have been measured up to 5.0 GPa. The vibrational modes of Prussian blue appearing at 201 and 365 cm⁻¹ show negative dν/dP values and Grüneisen parameters and are assigned to the transverse bending modes of the Fe C N Fe linkage which can contribute to a negative thermal expansion behavior. A phase transition occurring between 2.0 and 2.8 GPa in potassium ferricyanide is shown by changes in the spectral region 150–700 cm⁻¹. In the spectra of the nitroprusside ion, there are strong interactions between the FeN stretching mode and the FeNO bending and the axial CN stretching modes. The pressure dependence of the NO stretching vibration is positive, 5.6 cm⁻¹ GPa⁻¹, in contrast to the negative behavior in the iron(II)‐meso‐tetraphenyl porphyrinate complex. Copyright © 2011 John Wiley & Sons, Ltd.     

Vibrational study of the superprotonic phase transition in the mixed crystal Rb2(HSeO4)(H2PO4)

Raman spectra (10–1200 cm⁻¹) of polycrystalline samples of Rb₂(HSeO₄)(H₂PO₄) were studied at temperatures ranging from 300 to 423 K. An assignment of most of the observed bands is proposed. The first‐order phase transition previously detected at 382 K was characterized as: This superionic‐protonic transition is believed to be governed by librations of the HSe/PO₄²⁻ ion and the A OH (A = Se, P) stretching mode. It corresponds to the weakening of  Se(P) O H˙˙˙ H O Se(P) hydrogen bonds and to the melting of the proton sublattice into a quasi‐liquid state in which the protons and the HSe/PO₄²⁻ ions contribute to the unusually high conductivity. The activation energy that was determined from the plot Δν_1/2 versus temperature for the ν (A OH) band has the same order of magnitude as that determined from conductivity measurements. Copyright © 2006 John Wiley & Sons, Ltd.     

Spectroscopic and computational studies on self‐assembly complexes of bis(pyrrol‐2‐ ylmethyleneamine) ligands linked by alkyl spacers with Cu(II)

Bis(pyrrol‐2‐ylmethyleneamine) ligands and their mononuclear monomeric and dinuclear dimeric self‐assembly complexes with Cu(II) were investigated by means of IR and Raman spectroscopies and density functional theory. The ground‐state geometries were calculated by using the Becke Lee Yang Parr composite exchange‐correlation functional (B3LYP) and a combined basis set (LanL2DZ for Cu; 6–31G(d) for C, H, N), and they were compared with the single‐crystal X‐ray diffraction (XRD) structures. The DFT‐calculated Cu N bond lengths are generally higher by 0.001–0.040 Å than those determined through XRD. The vibrational spectra were also calculated at the same level of theory for the optimized geometries. The calculated wavenumbers were scaled by a uniform scaling factor and compared with the experimental fundamentals. The predicted spectra are in good agreement with the experimental ones with the deviations generally less than 30 cm⁻¹. In comparison with the spectra of the ligands, the coordination effect shifts the υ(CN) wavenumber by about 50 cm⁻¹ toward a lower value. Because of the weak intermolecular C H···Cu hydrogen bond, the Cu N stretching mode is shifted toward a lower wavenumber. Copyright © 2006 John Wiley & Sons, Ltd.     

Pure rotational spectra of 32SF535Cl, 32SF537Cl,and 34SF535Cl up to 300 GHz

Pure rotational spectra of the three molecules ³²SF₅³⁵Cl, ³²SF₅³⁷Cl, and ³⁴SF₅³⁵Cl in their ground vibrational states have been observed up to 300 GHz (8 < J < 80). Molecular parameters have been computed with good accuracy for the three isotopic species. The “K-type” splitting characteristic of molecules belonging to the C_4v symmetry group has been clearly seen and measured.     

Raman spectroscopic study of the hydrogen and arsenate bonding environment in isostructural synthetic arsenates of the variscite group—M3+ AsO4·2H2O (M3+ = Fe,Al, In and Ga): implications for arsenic release in water

The Raman spectra of synthetic compounds equivalent to the variscite group: FeAsO₄·2H₂O AlAsO₄·2H₂O, GaAsO₄·2H₂O, and InAsO₄·2H₂O are reported. In particular, upon comparison of FeAsO₄·2H₂O to AlAsO₄·2H₂O, it is observed that the Type II (weak) H‐bond lengths in the latter are slightly longer, which is postulated to affect the stability (As release) in water at pH 5 and 7. Arsenate stretching and bending vibrations were found to be distinct in terms of spectral structure and therefore well suited for fingerprinting. The calculated As O bond strengths from existing crystallographic data showed no significant variations. The strongest ν₁ (AsO₄³⁻) stretch was used to monitor the As O bonding interactions in the four As O M units, where a shift of 114 cm⁻¹ was observed in the order FeAsO₄·2H₂O (lowest) < InAsO₄·2H₂O < GaAsO₄·2H₂O < AlAsO₄·2H₂O (highest); this order also followed exactly the measured arsenic release of these phases. This shift in ν₁ (AsO₄³⁻) position was rationalized to stem from the differences in the electronegativities of the M³⁺ cations. The trends mentioned above were verified and found to also hold for the isostructural phosphate analogues strengite (FePO₄·2H₂O) and variscite (AlPO₄·2H₂O) using published data. Therefore, it is postulated that, as observed with the stability of solution complexes, there may be a correlation between the electronegativity of the M³⁺ cation in these isostructural phases and their stability (As or P release) in water. Copyright © 2010 John Wiley & Sons, Ltd.     

Lifetime of the 6+ member of the ground-state band in 22Ne

Mean lifetimes of levels in ²²Ne have been measured by the Doppler-shift attenuation method using the inverse reaction ⁴He(¹⁹F, pγ)²²Ne. The Doppler-broadened lineshapes observed at 0° were analyzed using scaled experimental stopping powers and give the following results for each of the following levels (energy in keV and lifetime in fs): 4457 ( < 15), 5147 (1300 ± 500), 5522 (27 ± 4), 5641 ( < 20), 6311 (70 ± 10), 6345 ( < 15), 6636 ( < 20) and 6817 ( < 15). The lifetime of the 6311 keV 6⁺ level is particularly interesting for testing model predictions. The large basis shell model calculations of Preedom and Wildenthal are in good agreement with the experimental B(E2) values for the 2⁺, 4⁺ and 6⁺ members of the ground-state band.     

Diffusion tensor parameters and principal eigenvector coherence: Relation to b-value intervals and field strength

Diffusion-weighted MRI images acquired at b-value greater than 1000 s mm^− 2 measure the diffusion of a restricted pool of water molecules. High b-value images are accompanied by a reduction in signal-to-noise ratio (SNR) due to the application of large diffusion gradients. By fitting the diffusion tensor model to data acquired at incremental b-value intervals, we determined the effect of SNR on tensor parameters in normal human brains, in vivo. In addition, we also investigated the impact of field strength on the diffusion tensor model. Data were acquired at 1.5 and 3 T, at b-values 0, 1000, 2000 and 3000 s mm^− 2 in twenty diffusion-sensitised directions. Fractional anisotropy (FA), mean diffusivity (MD) and principal eigenvector coherence (κ) were calculated from diffusion tensors fitted between datasets with b-values 0–1000, 0–2000, 0–3000, 1000–2000 and 2000–3000 s mm^− 2. Field strength and b-value effects on diffusion parameters were analysed in white and grey matter regions of interest. Decreases in FA, κ and MD were found with increasing b-value in white matter. Univariate analysis showed a significant increase in FA with increasing field strength in highly organised white matter. These results suggest there are significant differences in diffusion parameters at 1.5 and 3 T and that the optimal results, in terms of the highest values of FA in white matter, are obtained at 3 T with a maximum b = 1000 s mm^− 2.     

Effect of an aliphatic spacer group on the adsorption mechanism on the colloidal silver surface of L‐proline phosphonodipeptides

A comparative study of molecular structures of five L ‐proline (L ‐Pro) phosphonodipeptides: L ‐Pro‐NH‐C(Me,Me)‐PO₃H₂ (P1), L ‐Pro‐NH‐C(Me,iPr)‐PO₃H₂ (P2), L ‐Pro‐L ‐NH‐CH(iBu)‐PO₃H₂ (P3), L ‐Pro‐L ‐NH‐CH(PA)‐PO₃H₂ (P4) and L ‐Pro‐L ‐NH‐CH(BA)‐PO₃H₂ (P5) has been carried out using Raman and absorption infrared techniques of molecular spectroscopy. The interpretation of the obtained spectra has been supported by density functional theory calculations (DFT) at the B3LYP; 6–31 + + G** level using Gaussian 2003 software. The surface‐enhanced Raman scattering (SERS) on Ag‐sol in aqueous solutions of these phosphonopeptides has also been investigated. The surface geometry of these molecules on a silver colloidal surface has been determined by observing the position and relative intensity changes of the Pro ring, amide, phosphonate and so‐called spacer (−R) groups vibrations of the enhanced bands in their SERS spectra. Results show that P4 and P5 adsorb onto the silver as anionic molecules mainly via the amide bond (∼1630, ∼1533, ∼1248, ∼800 and ∼565 cm⁻¹), Pro ring (∼956, ∼907 and ∼876 cm⁻¹) and carboxylate group (∼1395 and ∼909 cm⁻¹). Coadsorption of the imine nitrogen atom and PO group with the silver surface, possibly by formation of a weaker interaction with the metal, is also suggested by the enhancement of the bands at 1158 and 1248 cm⁻¹. P1, P2 and P3 show two orientations of their main chain on the silver surface resulting from different interactions of the  C CH₃,  NH and  CONH fragments with this surface. Bonding to the Ag surface occurs mainly through the imino atom (1166 cm⁻¹) for P2, while for P1 and P3 it occurs via the methyl group(s) (1194–1208 cm⁻¹). The amide group functionality (CONH) is practically not involved in the adsorption process for P1 and P2, whereas the C_s P bonds do assist in the adsorption. Copyright © 2008 John Wiley & Sons, Ltd.     

The correlation of fractional anisotropy parameters with Ki-67 index,and the clinical implication in grading of non-enhancing gliomas and neuronal-glial tumors

PurposeTo investigate the correlation between the FA parameters and Ki-67 labeling index, and their diagnostic performance in grading supratentorial non-enhancing gliomas and neuronal-glial tumors (GNGT).MethodsThis institutional review board-approved, Health Insurance Portability and Accountability (HIPAA) compliant retrospective study enrolled 35 patients, including 19 with low grade GNGT and 16 with high grade GNGT. The mean FA, maximal FA and mean maximal FA values derived from diffusion tensor imaging were measured. The correlation between the FA parameters and the Ki-67 labeling index was assessed by Spearman rank test. The receiver operating characteristic curve analysis and multivariate logistic regression analysis were performed to detect the optimal imaging parameters in grading GNGT.ResultsThe three FA parameters of low grade GNGT were significantly lower than the high grade GNGT (p < 0.001). The mean FA, maximal FA and mean maximal FA had significant positive correlation with Ki-67 labeling index (p = 0.001, p < 0.001, p < 0.001 respectively). The maximal FA showed a higher sensitivity and specificity in grading of non-enhancing GNGT with specificity of 78.9%, sensitivity of 100.0%, respectively.ConclusionsThe FA parameters correlated with Ki-67 labeling index, and were useful surrogates in preoperative grading supratentorial non-enhancing GNGT.