Theoretical calculations of the unimolecular canonical rate constants

Microcanonical rate constants k(E) and canonical rate constants k(T) for unimolecular reactions have been obtained through the calculations of cumulative reaction probabilities N(E) with the unsymmetrical Eckart potential tunneling correction. By way of example, the reactions HCN→CNH (I) and FNC→NCF (II) have been employed. For reaction (I), the calculated rate constants are in agreement with the experimental data; for reaction (II), the results are in accordance with the rate constants kCVT/MEPSAG(T) calculated by the common program POLYRATE.     

Theoretical study on the unimolecular decomposition of thiophenol

The potential energy surface for the unimolecular decomposition of thiophenol (C(6)H(5)SH) is mapped out at two theoretical levels; BB1K/GTlarge and QCISD(T)/6-311+G(2d,p)//MP2/6-31G(d,p). Calculated reaction rate constants at the high pressure limit indicate that the major initial channel is the formation of C(6)H(6)S at all temperatures. Above 1000 K, the contribution from direct fission of the S-H bond becomes important. Other decomposition channels, including expulsion of H(2) and H(2)S are of negligible importance. The formation of C(6)H(6)S is predicted to be strong-pressure dependent above 900 K. Further decomposition of C(6)H(6)S produces CS and C(5)H(6). Overall, despite the significant difference in bond dissociation, i.e., 8-9 kcal/mol between the S-H bond in thiophenol and the O-H bond in phenol, H migration at the ortho position in the two molecules represents the most accessible initial channel.     

A theoretical survey on the structures, energetics, and isomerization pathways of the B(5)O radical

Boron-centered radicals have received growing interest. Recently, two groups reported density functional theory investigations (GGA-PW91 and B3LYP) on a hexa-atomic boron-oxide radical, B(5)O, which has led to great discrepancies on the type of low-lying structures. In this article, we not only explore the energetics of doublet and quartet B(5)O isomers at high electron-correlated levels (CCSD(T)/6-311+G(2df), CCSD(T)/aug-cc-pVTZ, and G3B3) but also investigate the isomerization and fragmentation stability of the low-lying B(5)O isomers. All the high-level studies consistently show that the B(5)O radical possesses a belt-like ground structure (2)01 in doublet electronic state followed by isomer (2)02 with an exocyclic - BO moiety at around 3.0 kcal/mol. Kinetically, (2)01 and (2)02 are separated by a considerable barrier of about 20 kcal/mol. Thus, the two isomeric forms of B(5)O radical should be very promising for isolation in laboratory. However, the other four isomers reported recently are all kinetically unstable toward conversion to (2)01 and (2)02. The high thermodynamic and kinetic stability of (2)01 and (2)02 might make them as important building cores in the growth of boron-oxide clusters. This results would also help deeply understand the oxidation and doping mechanism of pure boron clusters.     

Heteropolynuclear palladium complexes with pyrazolate and its 3-tert-butyl derivatives: the effect of heterometal ions on the rate of isomerization

The heteropolynuclear complexes [Pd(2)M'(2)(mu-pz)(6)] (M'=Ag (1), Au (2); pzH=pyrazole), HT-[Pd(2)M'(2)(mu-3-tBupz)(6)] (M'=Ag (3 a), Au (4 a); 3-tBupzH=3-tert-butylpyrazole), and HH-[Pd(2)Au(2)(mu-3-tBupz)(6)] (4 b) have been prepared and some of them were structurally characterized. When 3-tert-butylpyrazolate was employed as a bridging ligand, two linkage isomers (head-to-tail (HT) and head-to-head (HH)) arise from the difference in orientation of the substituent groups on the pyrazolate bridges between the two Pd atoms. (1)H NMR spectroscopy has been used to identify and to follow the reversible stereochemical rearrangement of the HH isomer of [Pd(2)Ag(2)(mu-3-tBupz)(6)] (3 b) to form the HT isomer 3 a in CDCl(3) and the HT isomer of [Pd(2)Au(2)(mu-3-tBupz)(6)] (4 a) to form the HH isomer 4 b in C(6)D(6). Kinetic studies of the reaction have established the rate law to be -d(HH)/dt=d(HT)/dt=k(2)[HH]-k(1)[HT] for 3 b and -d(HT)/dt=d(HH)/dt=k(1)[HT]-k(2)[HH] for 4 a, where k(1) and k(2) denote the rate of isomerization from the HT to the HH isomer and that from the HH to the HT isomer, respectively. For typical runs at 50 degrees C in C(6)D(6), k(1)=13.8x10(-5) s(-1), k(2)=18.6x10(-5) s(-1), and K(eq)=k(2)/k(1)=1.24 for 3 b, and k(1)=1.26x10(-5) s(-1), k(2)=3.52x10(-5) s(-1), and K(eq)=k(1)/k(2)=0.36 for 4 a. Temperature-dependent rate measurements reveal DeltaH(not equal) and DeltaS(not equal) to be 100(1) kJ mol(-1) and 0(3) J mol(-1) K(-1) for 3 b and 112(5) kJ mol(-1) and 20(17) J mol(-1) K(-1) for 4 a, respectively. The rate of isomerization is essentially unaffected by the concentration of the complex or by the presence of neutral bridging ligands. These data and observations imply that the isomerization involves an intramolecular exchange process.     

黄嘌呤异构体质子转移异构化反应机理的理论研究

采用量子化学密度泛函B3LYP/6-31G(d,p)和M06-2X/6-311++G(d,p)方法对黄嘌呤两种酮式异构体X(1,3,7)与X(1,3,9)间质子转移引起的互变异构反应机理进行了计算研究,获得了异构化反应过程的反应焓﹑活化吉布斯自由能和质子转移反应的速率常数等参数。水相计算采用极化连续(PCM)模型。结果表明,由于可能的氢迁移顺序差异,分子内由X(1,3,7)向X(1,3,9)异构化可能共有16条反应通道,涉及11个中间体和20个过渡态,其主反应通道速控步骤的活化吉布斯自由能为183.10k J/mol,速率常数为5.17×10-20s-1,其余各通道速控步骤活化吉布斯自由能均较高,而且整体水溶剂效应不利于质子转移的发生。     

π-σ-π型单分子电子器件:分子内电子转移及其外电场效应

将由联苯阴离子和中性萘之间通过刚性环己烷所连接的经典的电子转移体系作一构象修正，得到一个π-σ-π型分子。UHF/6-31G**研究表明，此体系具有更高的能垒和小得多的电子转移耦合，而且其耦合几乎完全通过环己烷桥上的化学键实现。外电场效应的研究进一步发现，该体系在无外场条件下几乎没有电子转移反应发生，但当外电场增至0．001463au时，反应的能垒消失，其电子转移速率达到10^5d^-1数量级。所有特征均显示，该体系具有作为单分子电子器件的分子原型的巨大潜力。     

Effect of metals on the catalytic activity of sulfated zirconia for light naphtha isomerization

We studied on the function of the metal in the sulfated zirconia(SO₄^2–/ZrO₂) catalyst for the isomerization reaction of light paraffins. The addition of Pt to the SO₄^2–/ZrO₂ carrier could keep the high catalytic activity. The improvement in this isomerization activity is because Pt promotes removal of the coke precursor deposited on the catalyst surface. Though this catalytic function was observed in other transition metals, such as Pd, Ru, Ni, Rh and W, Pt exhibited the highest effect among them. It was further found that the Pd/SO₄^2–/ZrO₂–Al₂O₃ catalyst possessed a catalytic function for desulfurization of sulfur-containing light naphtha in addition to the skeletal isomerization. The sulfur tolerance of catalyst depended on the method of adding Pd, and the catalyst prepared by impregnation of the SO₄^2–/ZrO₂–Al₂O₃ with an aqueous solution of Pd exhibited the highest sulfur tolerance.Further, we investigated the improvement in sulfur tolerance of the Pt/SO₄^2–/ZrO₂–Al₂O₃ catalyst by impregnation of Pd. The results of EPMA analysis indicated that this catalyst was a hybrid-type one (Pt/SO₄^2–/ZrO₂–Pd/Al₂O₃) in which Pt/SO₄^2–/ZrO₂ particles and Pd/Al₂O₃ particles adjoined closely. This hybrid catalyst possessed a very high sulfur tolerance to the raw light naphtha that was obtained from the atmospheric distillation apparatus, although this light naphtha contained much sulfur. We assume that such a high sulfur tolerance in the hybrid catalyst is brought about by the isomerization function of Pt/SO₄^2–/ZrO₂ particles and the hydrodesulfurization function of Pd/Al₂O₃ particles. Besides, since the hybrid catalyst also provides high catalytic activity in the isomerization of HDS light naphtha, we suggest that the Pd/Al₂O₃ particles supply atomic hydrogen to the Pt/SO₄^2–/ZrO₂ particles by homolytic dissociation of gaseous hydrogen and also enhance the sulfur tolerance of Pt/SO₄^2–/ZrO₂ particles. Finally, we also propose the most suitable location of Pd and Pt in the metal-supported SO₄^2–/ZrO₂–Al₂O₃ catalyst.     

Effect of electron-electron correlations on the activation free energy of adiabatic electrochemical reactions of dissociative electron transfer

Adiabatic free energy surfaces for adiabatic electrochemical reactions of dissociative electron transfer are calculated with exact allowance for the effects of electron-electron correlations in a model of an electrode with an infinitely broad conduction band. The role of correlation effects in these reactions is discussed. It is shown that, as in common adiabatic electrochemical reactions of electron transfer, correlation effects play a substantial role and lead to a considerable decrease in the activation free energies.__________Translated from Elektrokhimiya, Vol. 41, No. 4, 2005, pp. 412–418.Original Russian Text Copyright © 2005 by Kuznetsov, Medvedev, Sokolov.     

Effect of the nature of zeolite and modifying additives on the activity of zeolite-containing catalysts inn-butane isomerization

Isomerization ofn-butane on various types of zeolites (ZVM, ZVK, mordenite, and Y) modified with transition metals and cationic and anionic additives was investigated. Under the conditions studied, H-forms of zeolites are inactive. Pt-containing systems based on the H-form of ZVM (HZVM) are the most efficient catalysts forn-butane isomerization, and the yield of isobutane reaches 20–26 wt.% at a selectivity of 40–45%. Modification of this catalyst with Ga and Fe compounds or with an aqueous solution of HCl increases the selectivity with respect to isobutane up to 70–90%. Introduction of Zn²⁺ cations or F⁻ and SO₄ ²⁻ anions into the Pt-containing HZVM system decreases the selectivity and yield of isobutane due to the formation of very strong acidic centers on which disproportionation and hydrocracking ofn-butane mainly occur. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 7, pp. 1281–1285, July, 1999.     

Effect of aminoacids on the surface free energy of nitrofurantoin

Changes in nitrofurantoin surface free energy components, Lifshitz-van der Waals, _s ^LW , electron donor, _s ^– , and electron acceptor, _s ⁺ , due to adsorption of the aminoacids: lysine, alanine and glutamic acid, were determined by means of the thin-layer wicking technique. It was found that the aminoacids slightly increase the _s ^– component already at 10^–4 M concentration. They reduce the _s ⁺ component practically to zero, and a very sharp increase of _s ^– was observed when the nitrofurantoin surface was precovered from the solutions at concentrations larger tan 10^–4 M. It is concluded that the adsorption of the aminoacids takes place via hydrogen bonding and electrostatic interactions between nitrofurantoin surface and aminoacid molecules. The increase in the _s ^– parameter is probably caused by the presence of carboxyl groups in the aminoacid molecules.     

The effect of restricted intramolecular energy flow on the rate of one-substrate enzyme catalyzed reaction

We assume that the free intramolecular energy flow (intramolecular vibrational energy redistribution—IVR) between bonded substrate and enzyme can be restricted due to the presence of a metal atom near the binding site of enzyme. This restriction can represent one of the factors of enzyme catalysis. The concentration of energy evolved during the formation of enzyme-substrate complex in the bonded substrate enhances the reaction rate by several orders of magnitude in comparison with the case of free dissipation of evolved energy into the enzyme.     

ESR study of free-radical intramolecular transfer of a hydrogen atom: mechanisms and kinetics of the reactions

A method for preparing >Si(R₁(R₂ ^.) structures (R₁=CH₃, CD₃, or CH₂−CH₃, R₂ ^.=CH₂−CH₂ ^. or CD₂−CD₂ ^.) grafted to a silica surface is developed. The reactions of intramolecular transfer of H (D) atoms between the R₁ and R₂ ^. fragments were studied by ESR. The directions and kinetic parameters of these reactions were established. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 8, pp. 1468–1471, August, 1997.     

Nonperturbative quantum simulation of time-resolved nonlinear spectra: Methodology and application to electron transfer reactions in the condensed phase

A quantum dynamical method is presented to accurately simulate time-resolved nonlinear spectra for complex molecular systems. The method combines the nonpertubative approach to describe nonlinear optical signals with the multilayer multiconfiguration time-dependent Hartree theory to calculate the laser-induced polarization for the overall field–matter system. A specific nonlinear optical signal is obtained by Fourier decomposition of the overall polarization. The performance of the method is demonstrated by applications to photoinduced ultrafast electron transfer reactions in mixed-valence compounds and at dye–semiconductor interfaces.     

Accurate potential energy surfaces for hydrogen abstraction reactions: A benchmark study on the XYG3 doubly hybrid density functional

The potential energy surface (PES) for the H + CH₄ system has been constructed with the recently developed XYG3 doubly hybrid functional, while those with the standard B3LYP hybrid functional, and the Møller–Plesset perturbation theory up to the second order (MP2) are also presented for comparison. Quantum dynamics studies demonstrated that satisfactory results on the reaction probabilities and the rate coefficients can be obtained on top of the XYG3‐PES, as compared to the results based on the highly accurate, yet expensive, CCSD(T)‐PES (Li et al., J. Chem. Phys. 2015, 142, 204302). Further investigation suggested that the XYG3 functional is useful in providing accurate rate coefficients for some larger systems involving H atom abstractions. © 2017 Wiley Periodicals, Inc.     

Effect of rate and direction of solution flow on metal deposition in porous electrodes: The final weight and distribution of the deposit

Using an earlier-developed dynamic model for a porous flow-through electrode (PFE) with a high initial conductivity, the effect of the solution’s flow rate (0.05–10 cm/s) and direction on the final metal weight m _f and uniformity of the metal distribution in the porous matrix is studied. It is found that m _f increases with increasing flow rate. However, the dependence is nonmonotonic: it peaks at intermediate flow rates. The peak is most pronounced in the case of rear supply. At high and very low flow rates, m _f is independent of the flow direction. In the first case, the metal distribution profiles almost coincide, while in the second case they are mirror-opposite. The deposit weight correlates well with the index of uniformity of its distribution: all other factors being equal, the more uniform the deposit distribution in PFE, the larger the m _f. These effects are explained by taking into account the joint effect of profiles of cathodic polarization and concentration of metal ions in PFE.     

Effect of Ni Loading on the Catalytic Properties of Molybdenum Oxides for the Isomerization of Heptane

The catalytic properties of MoOx and incorporation Ni onto the MoOx for the isomerization of heptane have been investigated under atmospheric pressure at different conditions such as different flow rate of H2,different reaction temperature tec. Compared with MoOx, the Ni addition to the MoOx markedly improved the isomerization activity of heptane by improving the reducibility of MoO3 and activation of H2 in reaction.     

Influence of the architecture of light-harvesting antennae on the energy transfer efficiency and rate: Probability analysis

The high efficiency of natural light-harvesting systems is based on the optimal organization of various parts of photosynthetic antennae, carotenoids and porphyrins. The rate and efficiency of energy transfer inside an antenna and between the antenna and the reaction center were studied using probability analysis. The transfer rate and efficiency were found to depend on the antenna architecture. The most efficient antennae are those in which a maximal number of photosensitive elements are in direct contact with the reaction center, whereas the interaction with neighboring elements is minimal. The following types of antennae, in order of decreasing efficiency, were studied: parallel, ring, spherical, cluster, and sequential. Explicit expressions relating the average transfer route length and the fraction of energy received by the reaction center to the number of photosensitive elements and the efficiency of the elementary transfer event were derived. The spatial arrangement of photosensitive elements and the resistance of the antenna to damage of individual elements were taken into account.     

Quantum effect of intramolecular high-frequency vibrational modes on diffusion-controlled electron transfer rate: from the weak to the strong electronic coupling regions

The Sumi-Marcus theory is extended by introducing two approaches to investigate electron transfer reactions from weak-to-strong electronic coupling regime. One of these approaches is the quantum R-matrix theory, useful for dealing with the intramolecular vibrational motions in the whole electronic coupling domain. The other is the split operator approach that is employed to solve the reaction-diffusion equation. The approaches are then applied to electron transfer in the Marcus inverted regime to investigate the nuclear tunneling effect on the long time rate and the survival probabilities. The numerical results illustrate that the adiabatic suppression obtained from the R-matrix approach is much smaller than that from the Landau-Zener theory whereas it cannot be predicted by the perturbation theory. The jointed effects of the electronic coupling and solvent relaxation time on the rates are also explored.