An ethnopharmacological study of medicinal plants in New South Wales

The Australian Aboriginal people have used plants as medicine and food for thousands of years, however, this traditional knowledge is documented only to a limited extent, and is in danger of being lost. The Indigenous Bioresources Research Group (IBRG) aims to help Australian Aboriginal communities to preserve their customary medicinal knowledge, and to provide information that can be used for their cultural or educational purposes, as well as for scientific advancement. This work is undertaken in close collaboration with Australian Aboriginal communities in New South Wales. The project is multidisciplinary, combining an ethnobotanical and an ethnopharmacological approach, which includes biological and chemical investigations, as well as developing best practices for protecting traditional knowledge. This paper describes the general strategy of the project as well as methods used in the ethnopharmacological study. Ethnobotanical databases are set up for each participating community. Plant material is collected, extracted, and active compounds are isolated using a bioassay-guided fractionation approach. All extracts and compounds are tested for biological activity in antimicrobial assays (disc diffusion, resazurin, fluorescein diacetate), neurological assays or anti-inflammatory assays, depending on their traditional use.     

Competitive adsorption of proteins and low-molecular-weight surfactants: computer simulation and microscopic imaging

Proteins and low-molecular-weight (LMW) surfactants are used in the food industry as emulsifying (and foaming) ingredients and as stabilizers. These attributes are related to their ability to adsorb at fluid-fluid (and gas-fluid) interfaces lowering the interfacial (and surface) tension of liquids. Hence, the study of the properties of adsorbed layers of these molecules can be expected to lead to a better understanding of their effect on food products. Direct proof of the validity of mesoscopic models of systems of proteins and LMW surfactants can only be achieved by quantitative theoretical predictions being tested against both macroscopic and mesoscopic experiments. Computer simulation constitutes one of the few available tools to predict mathematically the behaviour of models of realistic complexity. Furthermore, experimental techniques such as atomic force microscopy (AFM) now allow high resolution imaging of these systems, providing the mesoscopic scale measurements to compare with the simulations. In this review, we bring together a number of related findings that have been generated at this mesoscopic level over the past few years. A useful simple model consisting of spherical particles interacting via bonded and unbonded forces is described, and the derived computer simulation results are compared against those from the imaging experiments. Special attention is paid to the adsorption of binary mixtures of proteins, mixtures of LMW surfactants, and also protein+surfactant mixed systems. We believe that further development of these mathematically well-defined physical models is necessary in order to achieve a proper understanding of the key physico-chemical processes involved.     

Interaction between secondary and higher schools: A basis for fundamental chemical education

Nowadays, within the Russian system of higher education there are two subsystems working fairly independently. One is mass higher education, and other is fundamental (quality) education. The educational reform which has been underway since the mid-1990s only makes worse the situation. Every year higher school teachers note a decrease of the quality of applicants and first-year students, gaps in their knowledge of chemistry, mathematics, and other disciplines. Under such conditions, universities should provide themselves with a corpse of the adequately prepared applicants. What can be done in order to preserve traditions of the Russian fundamental university education? First of all, quality textbooks for school pupils and applicants can be written and published. Further, connections between higher education institutions and secondary school in various regions of the country can be established and developed. Another very important task consists in organizing and conducting science Olympiads for schoolchildren and applicants. All these activities are being undertaken now by the Moscow State University.     

Wavelength dependence of nanoscale photodegradation in poly(3-octylthiophene) thin films

The use of conducting polymers in optoelectronic devices is subject to the understanding of the electro-optical processes that take place at the nanoscale. One of the photo-induced processes that limit their application is the photodegradation, which reduces the device working life. In this work the photodegradation of poly(3-octylthiophene) thin films was studied by combining Kelvin probe microscopy and optical microscopy. In this way, a direct correlation between morphological and contact potential changes with optical density changes as a function of the irradiation wavelength and intensity can be made. These results, complemented with Raman spectra help to clarify the degradation processes that are taking place. We find that the photodegradation strongly depends on the irradiation wavelength blue light being much more aggressive than UV. In addition, the optical properties change abruptly before any substantial change in the morphology is observed.     

Incorporation of Na(+),K(+)-ATP-ase into the thiolipid biomimetic assemblies via the fusion of proteoliposomes

The black lipid membranes (BLMs) are artificial membrane systems that have been widely used in the study of different biological processes. In this paper the planar bilayer lipid membranes have been used to study the behavior of thiolipid molecules-dipalmitoyl-phosphatidyl-ethanolamine-mercaptopropionamide (DPPE-MPA) and cholesteryl 3-mercaptopropionate (Chs-MPA)-as compared to classical BLM made of natural lipids. We present our experiments on black thiolipid bilayer (BTM) formation from a thiolipid solution and basic results of pump currents generated by sodium-potassium pump-Na(+),K(+)-ATP-ase-introduced to such bilayer systems via proteoliposome adsorption with subsequent fusion. Our results imply that no substantial difference exists between BLMs formed from classical lipids and those made from thiolipids used in this study. The same thiolipid molecules were subsequently used for the formation of covalently bound, tethered bilayer lipid membranes (t-BLMs) on polycrystalline gold electrodes. Similarly, as in the case of BLMs, we took advantage of proteoliposome adsorption/fusion to obtain a t-BLM system with reconstituted enzyme. The vesicle fusion on hydrophobic or hydrophilic substrates is one of the main ways to obtain a bilayer system with incorporated biological species. In this paper we present also our preliminary results of electrochemical experiments using rapid solution exchange technique on such t-BLMs systems and their comparison with painted solid supported membranes (SSMs) and BLMs. We have also followed the process of vesicles fusion onto thiolipid monolayer by means of in situ atomic force microscopy in tapping mode (TM-AFM). On the basis of these experiments, we conclude that DPPE-MPA and Chs-MPA molecules used in our experiments preserve lipid properties, allowing for at least partial reconstitution of Na(+),K(+)-ATP-ase into such t-BLMs. On the other hand, the relatively compact organization on polycrystalline gold and the hydrophobic nature of the first monolayer of tethered thiolipids slows down the proteoliposome fusion onto such monolayers and consequently hinders the protein insertion. However, this effect can be overcome by mechanical stimulus that facilitates proteoliposome delamination onto the self-assembled monolayer.     

Characterization of nanomaterials in food by electron microscopy

Engineered nanomaterials (ENMs) are increasingly being used in the food industry. In order to assess the efficacy and the risks of these materials, it is essential to have access to methods that not only detect the nanomaterials, but also provide information on the characteristics of the materials (e.g., size and shape).This review presents an overview of electron microscopy (EM)-based methods that have been, or have the potential to be, applied to imaging ENMs in foodstuffs. We provide an overview of approaches to sample preparation, including drying, chemical treatment, fixation and cryogenic methods. We then describe standard and non-standard EM-based approaches that are available for imaging prepared samples. Finally, we present a strategy for selecting the most appropriate method for a particular foodstuff.     

Application of chemometrically processed thermogravimetric data for identification of baclofen-excipient interactions

Studies are constantly being conducted on the elaboration of efficient methods to confirm the compatibility of active pharmaceutical ingredients (APIs) and excipients, since medicinal products, apart from their APIs, also contain numerous excipients that not only have important functions in pharmaceutical preparations but can also initiate or participate in interactions with drug substances, which eventually lead to a decline in drug quality. With this in mind, research was undertaken to evaluate two of the most often applied pattern recognition methods, hierarchical cluster analysis (HCA) and principal component analysis (PCA), as supporting techniques in the identification of potential physicochemical interactions that may occur during the preformulation of solid dosage forms. The investigation performed with the use of baclofen and selected excipients has shown that with thermogravimetric analysis, HCA and PCA fulfill their role as supporting techniques in the interpretation of the data obtained. Based on these methods, it is possible to detect incompatibilities between baclofen and excipients, and the data obtained concur strongly with the results of differential scanning calorimetry and IR spectrometry analyses.     

Cyclic Disulfide Liposomes for Membrane Functionalization and Cellular Delivery

Liposomes are effective therapeutic delivery nanocarriers due to their ability to encapsulate and enhance the pharmacokinetic properties of a wide range of therapeutics. Two primary areas in which improvement is needed for liposomal drug delivery is to enhance the ability to infiltrate cells and to facilitate derivatization of the liposome surface. Herein, we report a liposome platform incorporating a cyclic disulfide lipid (CDL) for the dual purpose of enhancing cell entry and functionalizing the liposome membrane through thiol-disulfide exchange. In order to accomplish this, CDL-1 and CDL-2 , composed of lipoic acid (LA) or asparagusic acid (AA) appended to a lipid scaffold, were designed and synthesized. A fluorescence-based microplate immobilization assay was implemented to show that these compounds enable convenient membrane decoration through reaction with thiol-functionalized small molecules. Additionally, fluorescence microscopy experiments indicated dramatic enhancements in cellular delivery when CDLs were incorporated within liposomes. These results demonstrate that multifunctional CDLs serve as an exciting liposome system for surface decoration and enhanced cellular delivery.     

Aggregation and layering transitions in thin films of X-, T-, and anchor-shaped bolaamphiphiles at the air-water interface

Aggregation in Langmuir films is usually understood as being a disorderly grouping of molecules turning into chaotic three-dimensional aggregates and is considered an unwanted phenomenon causing irreversible changes. In this work we present the studies of 11 compounds from the group of specific surfactants, known as bolaamphiphiles, that exhibit reversible aggregation and, in many cases, transition to well-defined multilayers, which can be considered as a layering transition. These bolaamphiphiles incorporate rigid π-conjugated aromatics as hydrophobic cores, glycerol-based polar groups and hydrophobic lateral chains. Molecules of different shapes (X-, T-, and anchor) were studied and compared. The key property of these compounds is the partial fluorination of the lateral chains linked to the rigid cores of the molecules. The most interesting feature of the compounds is that, depending on their shape and degree of fluorination, they are able to resist aggregation and preserve a monolayer structure up to relatively high surface pressures (T-shaped and some X-shaped molecules), or create well-defined trilayers (X- and anchor-shaped molecules). Experimental studies were performed using Langmuir balance, surface potential and X-ray reflectivity measurements.     

The study of paramagnetic self‐assembled monolayers formed by nitroxide radical (TEMPO)3O3P on HOPG

The studies of (TEMPO)₃O₃P molecules (tri‐(2,2,6,6‐tetramethyl‐1‐oxyl‐4‐piperidyl) phosphite) and their monolayers formed on highly oriented pyrolytic graphite (HOPG) are presented. (TEMPO)₃O₃P is synthesized from TEMPOL precursor (4‐hydroxy‐2,2,6,6‐tetramethylpiperidine‐1‐oxyl). We focused on electron paramagnetic resonance (EPR) and scanning tunnelling microscopy (STM) investigations. The EPR experiments demonstrate the paramagnetism of (TEMPO)₃O₃P in powdered form and in solution. Furthermore, these paramagnetic properties of (TEMPO)₃O₃P are preserved after the deposition on HOPG substrate. The STM studies show that (TEMPO)₃O₃P molecules have a strong tendency to form self‐assembled monolayers (SAMs). The detailed STM images let us to explore the structure of (TEMPO)₃O₃P on HOPG and propose a structural model for the observed SAMs. Copyright © 2013 John Wiley & Sons, Ltd.     

The Physics and Radiochemistry of Solar Neutrino Detectors: What Have We Learned and What Can We Expect?

The situation in solar neutrino science has changed drastically in the past decade, with results now available from five neutrino experiments that use different methods to look at different regions of the solar-neutrino energy-spectrum. While the goal of all of these experiments is physics, they all rely heavily on chemistry and radiochemistry. Three of these experiments are radiochemical, the ³⁷Cl detector and the two different forms of ⁷¹Ga detectors used in GALLEX and SAGE are based on the chemical isolation and counting of the radioactive products of neutrino interactions. The other two, Kamiokande and its improved successor, Super- Kamiokande, detect neutrinos in real time; however, they also depend sensitively on radiochemistry in that (as in all the solar neutrino detectors) radioactive contaminants must be controlled at very low levels. It is noteworthy that all of these experiments (a) have detected solar neutrinos, but (b) all report deficits of the observed neutrinos relative to the predictions of standard solar models — the so-called "solar neutrino problem". In this paper, I review the basic principles of operation of these neutrino detectors, report their recent results, and discuss some of the interpretations that are now in vogue. I then describe some of the new neutrino detectors that are under construction or being developed, and discuss the kinds of new results we might expect to see in the early years of the new millennium.     

Bifunctional (Cyclopentadienone)Iron–Tricarbonyl Complexes: Synthesis,Computational Studies and Application in Reductive Amination

Reductive amination under hydrogen pressure is a valuable process in organic chemistry to access amine derivatives from aldehydes or ketones. Knölker’s complex has been shown to be an efficient iron catalyst in this reaction. To determine the influence of the substituents on the cyclopentadienone ancillary ligand, a series of modified Knölker’s complexes was synthesised and fully characterised. These complexes were also transformed into their analogous acetonitrile iron–dicarbonyl complexes. Catalytic activities of these complexes were evaluated and compared in a model reaction. The scope of this reaction is also reported. For mechanistic insights, deuterium‐labelling experiments and DFT calculations were undertaken and are also presented.     

Single-molecule studies on DNA and RNA.

DNA and RNA are the most individual molecules known. Therefore, single-molecule experiments with these nucleic acids are particularly useful. This review reports on recent experiments with single DNA and RNA molecules. First, techniques for their preparation and handling are summarised including the use of AFM nanotips and optical or magnetic tweezers. As important detection techniques, conventional and near-field microscopy as well as fluorescence resonance energy transfer (FRET) and fluorescence correlation spectroscopy (FCS) are touched on briefly. The use of single-molecule techniques currently includes force measurements in stretched nucleic acids and in their complexes with binding partners, particularly proteins, and the analysis of DNA by restriction mapping, fragment sizing and single-molecule hybridisation. Also, the reactions of RNA polymerases and enzymes involved in DNA replication and repair are dealt with in some detail, followed by a discussion of the transport of individual nucleic acid molecules during the readout and use of genetic information and during the infection of cells by viruses. The final sections show how the enormous addressability in nucleic acid molecules can be exploited to construct a single-molecule field-effect transistor and a walking single-molecule robot, and how individual DNA molecules can be used to assemble a single-molecule DNA computer.     

Fracture evaluation of plasticized polylactic acid / poly (3-HYDROXYBUTYRATE) blends for commodities replacement in packaging applications

Nowadays, scientific and technological efforts are being carried out to diminish serious ecological problems caused by indiscriminate use of non-biocompostable polymers in the packaging industry. In this sense, novel biodegradable blends of different composition based on poly(lactic acid) (PLA), poly(3-hydroxybutyrate) (PHB) and tributyrin (TB) are developed and here proposed as an eco-friendly alternative. Materials are characterized by fracture experiments under quasi-static and biaxial impact loading. Fracture behavior is analyzed together with thermal, tensile and water permeation properties to evaluate their potential in-service performance. TB_PLA/PHB blends with 15 wt% TB exhibit better permeation and fracture toughness than currently used bio-based polymers, being in the range of polyethylene properties. Results highlight the potential of these new blends broadening the current application field of PLA.     

Synthesis of farnesyl diphosphate analogues containing ether-linked photoactive benzophenones and their application in studies of protein prenyltransferases

Protein prenylation is a posttranslational lipid modification in which C(15) and C(20) isoprenoid units are linked to specific protein-derived cysteine residues through a thioether linkage. This process is catalyzed by a class of enzymes called prenyltransferases that are being intensively studied due to the finding that Ras protein is farnesylated coupled with the observation that mutant forms of Ras are implicated in a variety of human cancers. Inhibition of this posttranslational modification may serve as a possible cancer chemotherapy. Here, the syntheses of two new farnesyl diphosphate (FPP) analogues containing photoactive benzophenone groups are described. Each of these compounds was prepared in six steps from dimethylallyl alcohol. Substrate studies, inhibition kinetics, photoinactivation studies, and photolabeling experiments are also included; these experiments were performed with a number of protein prenyltransferases from different sources. A X-ray crystal structure of one of these analogues bound to rat farnesyltransferase illustrates that they are good substrate mimics. Of particular importance, these new analogues can be enzymatically incorporated into Ras-based peptide substrates allowing the preparation of molecules with photoactive isoprenoids that may serve as valuable probes for the study of prenylation function. Photoaffinity labeling of human protein geranylgeranyltransferase with (32)P-labeled forms of these analogues suggests that the C-10 locus of bound geranylgeranyl diphosphate (GGPP) is in close proximity to residues from the beta-subunit of this enzyme. These results clearly demonstrate the utility of these compounds as photoaffinity labeling analogues for the study of a variety of protein prenyltransferases and other enzymes that employ FPP or GGPP as their substrates.     

Gas phase synthesis, structure and unimolecular reactivity of silver iodide cluster cations, Ag(n)I(m)(+) (n = 2-5, 0 < m < n)

Multistage mass spectrometry (MS(n)) experiments reveal that gas phase silver iodide cluster cations, Ag(n)I(m)(+), are readily built up in a stepwise fashion via ion-molecule reactions between mass selected silver (Ag(3)(+) and Ag(5)(+)) or silver hydride (Ag(2)H(+) and Ag(4)H(+)) cluster cations and allyl iodide, in contrast to their reactions with methyl iodide, which solely result in ligation of the clusters. The stoichiometries of these clusters range from 1 < or = n < or = 5 and 1 < or = m < or = 4, indicating the formation of several new subvalent silver iodide clusters. Collision induced dissociation (CID) experiments were carried out on each of these clusters to shed some light on their possible structures. The products arising from CID of the Ag(n)I(m)(+) clusters are highly dependent on the stoichiometry of the cluster. Thus the odd-electron clusters Ag(4)I(2)(+) and Ag(5)I(+) fragment via loss of a silver atom. In contrast, the even-electron cluster ions all fragment via loss of AgI. In addition, Ag(2)I(2) loss is observed for the Ag(4)I(3)(+) and Ag(5)I(2)(+) clusters, while loss of Ag(3)I(3) occurs for the stoichiometric Ag(5)I(4)(+) cluster. DFT calculations were carried out on these Ag(n)I(m)(+) clusters as well as the neutrals associated with the ion-molecule and CID reactions. A range of different isomeric structures were calculated and their structures are described. A noteworthy aspect is that ligation of these silver clusters by I can have a profound effect on the geometry of the silver cluster. For example, D(3h) Ag(3)(+) becomes C(2v) Ag(3)I(+), which in turn becomes C(2h) Ag(3)I(2)(+). Finally, the DFT predicted thermochemistry supports the different types of reaction channels observed in the ion-molecule reactions and CID experiments.     

Explosives Sensing by Using Electron‐Rich Supramolecular Polymers: Role of Intermolecular Hydrogen Bonding in Significant Enhancement of Sensitivity

We demonstrate here that supramolecular interactions enhance the sensitivity towards detection of electron‐deficient nitro‐aromatic compounds (NACs) over discrete analogues. NACs are the most commonly used explosive ingredients and are common constituents of many unexploded landmines used during World War II. In this study, we have synthesised a series of pyrene‐based polycarboxylic acids along with their corresponding discrete esters. Due to the electron richness and the fluorescent behaviour of the pyrene moiety, all the compounds act as sensors for electron‐deficient NACs through a fluorescence quenching mechanism. A Stern–Volmer quenching constant determination revealed that the carboxylic acids are more sensitive than the corresponding esters towards NACs in solution. The high sensitivity of the acids was attributed to supramolecular polymer formation through hydrogen bonding in the case of the acids, and the enhancement mechanism is based on an exciton energy migration upon excitation along the hydrogen‐bond backbone. The presence of intermolecular hydrogen bonding in the acids in solution was established by solvent‐dependent fluorescence studies and dynamic light scattering (DLS) experiments. In addition, the importance of intermolecular hydrogen bonds in solid‐state sensing was further explored by scanning tunnelling microscopy (STM) experiments at the liquid–solid interface, in which structures of self‐assembled monolayer of the acids and the corresponding esters were compared. The sensitivity tests revealed that these supramolecular sensors can even detect picric acid and trinitrotoluene in solution at levels as low as parts per trillion (ppt), which is much below the recommended permissible level of these constituents in drinking water.     

C3-symmetrical supramolecular architectures: fibers and organic gels from discotic trisamides and trisureas

Hydrogen bonded C(3)-symmetrical molecules that associate into supramolecular stacks are described. Structural mutation on these molecules has been performed to elucidate the contribution of the different secondary interactions (hydrogen bonding, pi-pi stacking) to the self-assembly of the disks into chiral stacks. Twelve C(3)-symmetrical molecules have been investigated, six of which contain three central amide functionalities (1a-f) and six of which contain three central urea groups (2a-f). Peripheral groups of the disks are "small", "medium", or "large", half of them being achiral and the other half being chiral, to enable investigation of the supramolecular architectures with CD spectroscopy. In all of the cases, elongated, helical stacks are formed in apolar solution, except for the "medium" amide disks 1c/d. The elongated stacks of the C(3)-symmetrical disks form gels, which are visualized by AFM and SANS, and this confirms the directionality of the interactions. For the "large" urea disk, 2f, fibers with a length of up to 2 microm are observed. Temperature dependent and "sergeants-and-soldiers" CD measurements reveal that the urea stacks are much more rigid than the corresponding amide ones. In case of the "medium" urea disks, 2c/d, a true rigid rod, is formed. Where amide disks immediately reach their thermodynamic equilibrium, kinetic factors seem to govern urea aggregation. In a number of experiments aimed at reversibility with the urea stacks, hysteresis is observed, implying that these urea disks initially form a poorly defined stack, which subsequently transforms slowly into a well-defined, chiral architecture.     

Version of zones and zigzag structure in icosahedral fullerenes and icosadeltahedra

A circuit of faces in a polyhedron is called a zone if each face is attached to its two neighbors by opposite edges. (For odd-sized faces, each edge has a left and a right opposite partner.) Zones are called alternating if, when odd faces (if any) are encountered, left and right opposite edges are chosen alternately. Zigzag (Petrie) circuits in cubic (= trivalent) polyhedra correspond to alternating zones in their deltahedral duals. With these definitions, a full analysis of the zone and zigzag structure is made for icosahedral centrosymmetric fullerenes and their duals. The zone structure provides hypercube embeddings of these classes of polyhedra which preserve all graph distances (subject to a scale factor of 2) up to a limit that depends on the vertex count. These embeddings may have applications in nomenclature, atom/vertex numbering schemes, and in calculation of distance invariants for this subclass of highly symmetric fullerenes and their deltahedral duals.     

Time-resolved optical and infrared spectral studies of intermediates generated by photolysis of trans-RhCl(CO)(PR3)2. Roles Played in the Photocatalytic Activation of Hydrocarbons

Described are picosecond and nanosecond time-resolved optical (TRO) spectral and nanosecond time-resolved infrared (TRIR) spectral studies of intermediates generated when the rhodium(I) complexes trans-RhCl(CO)L2 (L = PPh3 (I), P(p-tolyl)3 (II), or PMe3 (III)) are subjected to photoexcitation. Each of these species, which are precursors in the photocatalytic activation of hydrocarbons, undergoes CO labilization to form an intermediate concluded to be the solvated complex RhCl(Sol)L2 (A(i)). The picosecond studies demonstrate that an initial transient is formed promptly (<30 ps), which decays to A(i) with lifetimes ranging from 40 to 560 ps depending upon L and the medium. This is proposed on the basis of ab initio calculations to be a metal-to-ligand charge transfer (MLCT) excited state. Second-order rate constants (kCO) for reaction of the A(i) with CO were determined, and these depend on the nature of L and the solvent, the slowest rate being for A(I) in tetrahydrofuran (kCO = 7.1 x 10(6) M(-1) x s(-1)), the fastest being for A(III) in dichloromethane (1.3 x 10(9) M(-1) x s(-1)). Each A(i) also undergoes competitive unimolecular reaction with solvent to form long-lived transients with TRIR properties suggesting these to be Rh(III) products of oxidative addition. Although this was mostly suppressed by the presence of higher concentrations of CO (which trapped A(i) to re-form the starting complexes in each case), both TRO and TRIR experiments indicate that a fraction of the oxidative addition could not be quenched. Thus, the short-lived MLCT state or a vibrationally hot species formed during the decay of this excited state appears to participate directly in C-H activation.