Crystal Structures of 1,3,5-Tris(bromomethyl)-2,4,6-trimethylbenzene and 2,4,6-Trimethyl-1,3,5-tris(4-oxymethyl-1-formylphenyl)benzene

Abstract  

The synthesis and X-ray crystal structure of 2,4,6-trimethyl-1,3,5-tris(4-oxymethyl-1-formylphenyl)benzene (2) and the crystal structure of its core molecule, 1,3,5-tris(bromomethyl)-2,4,6-trimethylbenzene (1) are reported. The compounds 1 and 2 crystallize in the triclinic system with space group P ī. The lattice parameters of 1 and 2 are a = 9.454(2) ?, b = 9.478(4) ?, c = 9.573(2) ?, α = 116.53(2)°, β = 109.705(14)°, γ = 101.293(18)°, V = 658.5(4) and a = 15.7707(6) ?, b = 16.3646(5) ?, c = 18.2805(6) ?, α = 83.202(2)°, β = 66.0120(10)°, γ = 73.704(2)°, V = 4137.2(2), respectively. In the crystals of 1 and 2, there are one and three molecules in the asymmetric unit, respectively. The packing of the molecules in the solid is stabilized through van der Waals interactions in 1 and weak C–H···O and C–H···π interactions in 2.     

The structure of [Co(H-tptz)Cl3]·H2O (tptz=2,4,6-tri(2-pyridyl)-1,3,5-triazine) prepared by crystallization from the ionic liquid, N-butyl-N-methyl-pyrrolidinium bis(trifluoromethanesulfonyl)imide

The structure of tris-chloro[2,6-bis(2′-pyridyl)-4-(2′-pyridinium)-1,3,5-triazine]cobalt(II) monohydrate, [Co(C₁₈H₁₃N₆)Cl₃]·H₂O (C2/c (No. 15), a=7.783(11), b=22.42(3), c=11.001(15) ?, β=90.05(2)°), crystallized from the open air reaction of CoCl₂ and 2,4,6-tri(2-pyridyl)-1,3,5-triazine in the ionic liquid, N-butyl-N-methyl-pyrrolidinium bis(trifluoromethanesulfonyl)imide is reported. The structure consists of six coordinate cobalt in an octahedral geometry bonded to the tridentate tptz ligand and three chlorines. The non-coordinating pyridyl group in the tptz ligand is protonated (with the protonated nitrogen crystallographically disordered over two possible sites), providing overall charge neutrality for the complex.     

1,3,5-三(羧基甲氧基)苯镍配位聚合物的合成、晶体结构及性质研究

采用溶剂热法,1,3,5-三(羧基甲氧基)苯为定向配体和乙酸镍反应构筑了一个新型的金属配位聚合物[Ni(TB)2(H2O)2]n·2H2O,其中H3TB=1,3,5-三(羧基甲氧基)苯,通过元素分析、IR及X射线单晶衍射对配合物结构进行表征,并研究其荧光性质、热稳定性及Hirshfeld表面作用力.单晶结构分析表明,该...     

Crystal and molecular structure of bis[2-ethylamino-4-n-propylamino-6-methoxy-1,3,5-triazine] copper(II) dichloride. 2-Ethylamino-4-n-propylamino-6-methoxy-1,3,5-triazine

The title compound crystallizes in the triclinic space group P1 with 2 formula units C₂₇H₅₁Cl₂CuN₁₅O₃ in the unit cell. The lattice constants are a = 11.298(2), b = 16.024(4), c = 11.977(3) Å, α = 111.64(2), β = 102.59(2), and γ = 94.46(2)°. The crystal structure was determined by the conventional R = 0.147. The complex formation and the conformations of the three independent triazine molecules are discussed.     

Structure of 2-anilino-4,6-diphenoxy-1,3,5-triazine

C₂₁H₁₆N₄O₂,M _r =356.4, crystallized from methanol in the orthorhombic space groupP2₁2₁2₁,a=5.137(2),b=12.937(2),c=27.111(6) Å,V=1801.7(9) ų,D _x =1.314 g cm^–3,Z=4, CuK,=6.7 cm^–1,F(000)=744,T=293K. The structure was solved with direct methods and refined by full-matrix least squares to a finalR=0.069 for 1303 observed reflections. The angles between triazine and adjacent phenyl rings planes are about 24° for anilino, 56 and 76° for phenoxy groups. The conjugation of the lone pair at the exocyclic O or N atoms is stronger with triazine than with the benzene system because the correspondingtriazine-X(N, O) bonds are shorter by 0.04 to 0.07 Å than thebenzene-X.     

Molecular and crystal structure of 2-amino-4-(tricyclo[3.3.1.1.3,7]decyl-1)-6-N-methyl-piperazino-1,3,5-triazine

The crystal and molecular structure of the title compound has been determined by X-ray diffraction. The compound crystallizes in the rhombohedral space groupR3 witha=b=c=17.804(9)Å,===116.48(2)° andZ=6. The structure was solved by direct methods and a full-matrix least-squares refinement converged to a finalR=0.061 for 1922 unique reflections. The adamantyl moiety is statically disordered in the crystal structure, and adopts two conformations related by the rotation of approximately 60° about the C(4)-C(9) bond. A hydrogen bond between N(7)N(21) arranges molecules into hexamers stacked along the threefold axis and provides for empty hydrophobic channels bounded by the adamantyl groups.     

Synthesis and crystal structure of 3,5-di(2-propenyl)-6-phenyl-1,3,5-triazine-2,4-dione and 2-dimethylamino-4-ethoxycarbonylmethoxy-6-phenyl-1,3,5-triazine

The title compound 3,5-di(2-propenyl)-6-phenyl-1,3,5-triazine-2,4-dione has been synthesized by the reaction of 6-phenyl-1,3,5-triazine-2,4-dione with allyl bromide. Its structure was determined by X-ray single crystal diffraction. The crystal belongs to orthorhombic, space group Pbca with the following crystallographic parameters: a = 16.282(4) Å, b = 8.888(2) Å, c = 19.281(5) Å, = 90°, = 90°, = 90°, = 0.088 mm^–1, V = 2790.1(13) ų, z = 8, Dx = 1.282 mg/m³, F(000) = 1136, T = 293(2) K, 2.11° 25.02°, the final R factor: R ₁ = 0.0430, wR₂ = 0.0981. The X-ray results demonstrate that the reaction of 6-phenyl-1,3,5-triazine-2,4-dione with allyl bromide in the presence of N,N-dimethylformamide and potassium carbonate yields the N-alkylated product. The title compound 2-dimethylamino-4-ethoxycarbonylmethoxy-6-phenyl-1,3,5-triazine has been synthesized by a new reaction, in which the solvent N,N-dimethylformamide involves. Its structure was determined by X-ray single crystal diffraction. The crystal belongs to triclinic, space group P-1 with the following crystallographic parameters: a = 7.977(2) Å, b = 10.394(3) Å, c = 10.837(3) Å, = 111.774(5)°, = 104.050(5)°, = 99.446(5)°, = 0.093 mm^–1, V = 776.6(4) ų, z = 2, Dx = 1.293 mg/m³, F(000) = 320, T = 293(2) K, 2.14° 25.03°, the final R factor: R ₁ = 0.0582, wR ₂ = 0.1399. The distance of N(4) C(2) (1.339 Å) is much shorter than the length of normal C N (1.47 Å) and very close to that of C-N (1.33 Å), which is indicative of the significant double bond character.     

Crystal structure of 2-nitrimino-5-nitro-hexahydro-1,3,5-triazine

The crystal and molecular structure of 2-nitrimino-5-nitro-hexahydro-1,3,5-triazine (NNHT) was determined. The relationship between the structural features of NNHT and its properties that pertain to its suitability as a potential oxidizer candidate for gun propellants is discussed. The NNHT structural features are also compared with analogous structural features of nitroguanidine (NQ) (Bracuti, A. J. J. Chem. Crystallogr. 1999, 29, 671) the more highly energetic triazine derivative, 1,3,5-trinitro-hexahydro-1,3,5-triazine (RDX) (Choi, C. S. and Prince, E. Acta.Crystallogr. B 1972, 28, 2857).     

X-ray Crystallographic Structures of Two Lamotrigine Analogues: (I) 3,5-Diamino-6-(2-chlorophenyl)-1,2,4-triazine Water Solvate and (II) 3,5-Diamino-6-(3,6-dichlorophenyl)-1,2,4-triazine Methanol Solvate

Abstract The X-ray crystal structures of two lamotrigine derivatives (I) 3,5-diamino-6-(2-chlorophenyl)-1,2,4-triazine, C₉H₈ClN₅, (465BL) as a hydrate, and (II) 3,5-diamino-6-(3,6-dichlorophenyl)-1,2,4-triazine, C₉H₇Cl₂N₅, (469BR) as a methanol solvate, have been carried out at liquid nitrogen temperature and room temperature, respectively. A detailed comparison of the two structures is given. Both are centrosymmetric with (I) in the orthorhombic space group Pbca, a = 12.2507(3), b = 15.7160(6), c = 21.71496(9) ?, Z = 16, and (II) in the monoclinic space group C2/c, a = 38.553(3), b = 4.9586(2), c = 14.546(2) ?, β = 111.59(1)°, Z = 8. Final R indices [I > 2sigma(I)] for (I) are R1 = 0.0670, wR2 = 0.1515 and for (II) R1 = 0.0434, wR2 = 0.1185. Structure (I) has water of crystallization in the lattice and (II) includes a solvated CH₃OH. Structure (I) is characterized by having two crystallographically independent molecules, A and B, of 465BL, per asymmetric unit. Molecule B has a very unusual feature in that the 2-chlorophenyl ring is statistically disordered, occupying site (1) in 87.5% of the structure and site (2) in 12.5% of the structure. Sites (1) and (2) are related by an exact 180° pivot of the phenyl ring about the ring linkage bond. The presence of two independent molecules per asymmetric unit provides an ideal opportunity for the conformational flexibility of the molecule 465BL to be studied. Structure (I) also includes a further unusual feature in that the lattice contains one fully occupied water molecule and an additional solvated water which is only 33% occupied. Index Abstract Rex A. Palmer, Brian S. Potter, Michael J Leach and Babur Z. Chowdhry The crystal structures of two lamotrigine analogues: (I) 3, 5-diamino-6-(2-chlorophenyl)-1, 2, 4-triazine, water solvate and (II) 3, 5-diamino-6-(3,6-dichlorophenyl)-1, 2, 4-triazine methanol solvate are presented. Structure (I) includes two molecules per asymmetric unit labeled A and B where molecule B is unusually disordered having Cl in either position 2 (87.5% occupied) or position 6 of the phenyl ring (12.5% occupied), the two sites being related by 180deg rotation about the ring linkage bond. Molecule I(A) on the other hand shows no disorder. The relative orientations of the two rings in I(A and B) and in II is shown to be different. Lamotrigine and analogues have been investigated for some time for their effects on the central nervous system. For example both lamotrigine and 5-(2,3,5-trichlorophenyl)-2,4-diaminopyrimidine (code name BW 1003C87) are voltage-gated sodium channel blockers as well as blocking the release of the neurotransmitter glutamate. BW 1003C87 has also been shown to reduce the release of glutamate evoked by veratrine in brain tissue, providing a therapeutic approach in both cerebral ischemia and epilepsy [B. S. Meldrum, J. H. Swan, M. J. Leach, M. H. Millan, R. Gwinn, K. Kadota, S. H Graham, J. Chen, R. P. Simon , Brain Res., 1992, 593, 1.]. This is one of a series of papers on the structures of lamotrigine analogues.      

A twist boat: Structure and conformation oftrans-2,4,6-tris(trichloromethyl)-1,3,5-trithian

Trans-2,4,6-tris(trichloromethyl)-1,3,5-trithian, (CCl₃·CHS)₃, has been prepared free from persistent impurification bycis-trans-2,4,6-tris(trichloromethyl)-1,3,5-oxadithian and its conformation determined by single crystal x-ray crystallography. The title compound is orthorhombic,Pbca, a=10.479(10),b=27.957(14),c=11.093(3) Å,V=3250 ų,Z=8. The structure was solved by direct methods, from data collected at room temperature on an Enraf-Nonius CAD4 diffractometer, and refined by full-matrix least squares to a finalR value at 0.074 using 1186 reflections. The molecule exhibits a twist boat conformation with the –CCl₃ groups occupying pseudoequatorial positions. The torsion angles in the trithian ring are successively 29(1), –79(1), 41(1), 41(1), –84(1), 39(1)°. Average values are: S-C 1.82(2), C(ring)-C(Cl₃) 1.56(4), C-Cl 1.76(2) Å, S-C-S 112.7(2)°. The C-S-C angles are 97.4(7), 101.4(7), 97.3(7)°.     

Isomerism in parabutylchloral; x-ray crystallographic determinations of 2,4,6-tris(1′,1′,2′-trichloropropyl)-1,3,5-trioxanes

-Parabutylchloral (2,4,6-tris(1,1,2-trichloropropyl)-1,3,5-trioxane, C₁₂H₁₅Cl₉O₃) crystallizes in the orthorhombic space groupP2₁2₁2₁ (No. 19) witha=12.165(6),b=9.964(5),c=17.433(9) Å,Z=4. The finalR value is 0.043 for 1667 observed reflections.-Parabutylchloral crystallizes in the orthorhombic space groupPna2₁ (No. 33), witha=12.387(6),b=10.488(5),c=16.605(8) Å,Z=4. The finalR value is 0.047 for 1417 observed reflections.Unlike the geometric isomers- and-parachloral (CCl₃CHO)₃ which exist in boat andcis,cis-chair conformations, the- and-forms of parabutylchloral (CH₃CHClCCl₂CHO)₃ are now shown by X-ray crystallography not to be geometric isomers. Both forms exist incis,cis-chair conformations and the isomerism arises from the chirality of the side chains at the-carbon atoms. In the-form only two of the side chains have the same chirality, but in the-form the chirality at all the-carbon atoms is the same. The X-ray results are supplemented by¹H and¹³C nuclear magnetic resonance spectroscopy and by mass spectrometry.We thank the CSIR (Pretoria) for collecting the diffractometer data, the CSIR and the University of Cape Town for research grants, Dr. M. L. Niven for crystallographic assistance, and Miss C. Angus for preparing parabutylchloral and separating the isomers. The 500 MHz NMR data are courtesy of Mr. Ivan Antonowitz of the CSIR.     

Crystal and molecular structure of 2-(2-pyridyl)-indandione-1,3 and a zinc(II) complex with this ligand

The crystal structures of 2-(2-pyridyl)-indandione-1,3 C₁₄H₉NO₂ (HL, I) and the zinc complex ZnL ₂(Dmso) (II) (where Dmso is dimethyl sulfoxide) with this ligand are determined. The specific features of the crystal structures of both compounds are considered. A comparative analysis of the supramolecular aggregates in crystals of these compounds is performed. It is demonstrated that the supramolecular dimers retain their structure in the crystals of compounds I and II. These dimers are involved in weak secondary interactions (usually of one type) with the formation of spatially more complex supramolecular associates, such as chains, ribbons, and layers.     

Structural and spectral study of 7-bromo-1,3-dihydro-5-(2-pyridyl)-2H-1,4-benzodiazepin-2-one (bromazepam) platinum(II) dichloride bisdimethylsulfoxide

The synthesis and crystal and molecular structure of the title compound are reported. It belongs to the monoclinic space groupC2/c, witha=17.889(2),b=13.511(1),c=19.912(2) Å,=99.841(4)°, andZ=8. The structure was refined to a finalR of 2.77% (R _w =2.88%) for 3617 observed reflections. Vibrational spectra are recorded and discussed.     

Crystal Structure of 1-(2-Pyridylmethyl)-2,4,6-Triphenyl-Pyridinium Perchlorate

The crystals of 1-(2-pyridymethyl)-2,4,6-triphenylpyridinium perchlorate are monoclinic, space group P 2₁/b. The unit cell parameters are a = 18.941(5), b = 19.502(6), c = 15.135(5),y = 115.99°(2), Z = 8, d₀ = 1.31(3), d_x = 1.319 g/cm³. The structure has been determined by direct methods and refined by block diagonal least squares to R₀ = 0.08 for 2520 reflections. The phenyl rings in both molecules (I) and (II) are planar. These rings are twisted with respect to the central pyridyl rings.     

Crystal and molecular structure of 2-(1-[alkyl,aryl)-2-acylhydrazino]-4,6-diaryloxy-1,3,5-triazine,C20H19Br2N5O3

The crystal and molecular structure of the title compound has been determined by X-ray diffraction techniques. It crystallizes in the monoclinic space group P 2₁/c with cell parameters a = 8.760 Å, b = 26.863 Å, c = 9.678 Å, and β = 106.03°. The structure was solved by the heavy atom method and refined by least-squares calculations to the conventional R value of 0.075.     

Syntheses,crystal structures and properties of Cd(II) and Ag(I) complexes based on 2-p-methylphenyl-5-(2-pyridyl)-1,3,4-thiadiazole

Abstract

Complexes of [CdL₂(NO₃)₂]·1.5H₂O and [Ag₂(μ-L)₂(NO₃)₂] were synthesized by the reactions of 2-p-methylphenyl-5-(2-pyridyl)-1,3,4-thiadiazole (L) with Cd(NO₃)₂·4H₂O and AgNO₃, respectively. Their structures were determined by single crystal X-ray diffraction. The photophysical property and thermal stability were characterized by FT???IR, UV???Vis absorption, fluorescence, and thermogravimetric analysis (TGA). Both complexes belong to the triclinic system with space group p???1. The central metal of [CdL₂(NO₃)₂]·1.5H₂O has a distorted octahedral geometry [CdN₄O₂], while two central Ag(I) atoms of [Ag₂(μ-L)₂(NO₃)₂] exhibit distorted tetrahedral geometries [AgN₃O].