Tautomerism and the spectroscopic properties of some 4,6-disubstituted pyrimedines

Tautomerism of some 4,6-disubstituted pyrimidines (with the electron-donor groups such as OH, SH and NH₂) is discussed with regard to their electronic absorption spectra. The spectra of different tautomeric forms of the molecules are satisfactorily interpreted by means of the Pariser—Parr—Pople type of calculations.     

Polarographic reduction and tautomeric structure of 2-amino-5-arylazothiazoles

The polarographic behaviour of a series of 2-amino-4-phenyl-5-arylazothiazoles has been investigated at a dropping mercury electrode. Each of the compounds studied exhibits one wave which was shown to correspond to the reductive cleavage of the azo linkage by a 4e irreversible step. On the basis of the polarographic data, it was concluded that the compounds exist only in one tautomeric form, namely the aminoazo structure 1 . The results of E_1/2 — σ_X correlations and HMO calculations of bonding energies of the various possible tautomeric forms 1–3 indicate that the aminoazo form 1 is the most stable structure of the compounds examined.     

Investigation of the structure of and the properties of the potentially tautomeric 1,2,3,4-tetrahydro-5,7-dimethyl-6H-pyrrolo[3,4-d]pyridazine-1,4-diones in the gaseous and aqueous phases using the AM1 semi-empirical method

Potentially tautomeric 1,2,3,4-tetrahydro-5,7-dimethyl-6H-pyrrolo[3,4-d]pyridazine-1,4-diones and their fixed tautomeric forms have been studied in order to predict their tautomeric equilibrium constants and pK_a values using semi-empirical AM1 quantum-chemical calculations at the SCF level in the gas phase and in aqueous solution. Hydroxy-oxo forms were found to be more stable than dioxo and dihydroxy forms. The results obtained from the tautomeric equilibria and basicity calculations are in good agreement with experimental data.     

UV and MO study on the deprotonation of some 2-aryl-Δ2-1,3,4-oxadiazoline-5-thiones

Substituent effects on the deprotonation processes of a series of 2-aryl-Δ²-1,3,4-oxadiazoline-5-thione (1) derivatives have been studied experimentally as well as theoretically. The acid dissociation constants pK_a have been determined spectrophotometrically in ethanol-water solutions (7.5-92.5%) and vary between 3.76 and 5.80. Semiempirical molecular orbital (MO) calculations (AM1 and PM3) were used for the investigation of the existence of possible tautomeric thione and thiol forms of the studied compounds. Strong correlation between the pK_a values and the deprotonation enthalpies were evaluated.     

Density functional theory study of tautomerization of 2‐aminothiazole in the gas phase and in solution

The amino/imino tautomeric equilibrium in the isolated, mono‐, di‐, and trihydrate forms and dimer of 2‐aminothiazole, and the effects of hydration or self‐assistance on the transition state structures corresponding to proton transfer from the amino to imino form, have been investigated by the B3LYP method in conjunction with 6‐31+G(d,p) and 6‐311+G(3df,2p) basis sets in the gas phase and in solution. The amino form has been found to be the predominant tautomer. The tautomeric barrier heights for water‐ and self‐assisted tautomerization reactions are significantly lower than that from the amino to imino form by the intramolecular proton transfer, showing the catalytic effect of water molecule(s) and the important role of 2‐aminothiazole itself for intermolecular proton transfer. Comparison between the tautomeric barriers demonstrates that the self‐association tautomerization through the dimerization is the most favorable pathway. Bulk solvent effects have been taken into account using the polarizable continuum model (PCM) of water and CCl₄. The polar medium is favorable for the population of the imino form. The amino/imino equilibrium is also analyzed using the aromaticity index nucleus‐independent chemical shift (NICS); the NICS values for the amino form (about ?10 ppm) are more negative than the imino species (about ?8 ppm), showing that the amino form is more stable. The time‐dependent density functional theory (TDDFT) calculations of electronic absorption spectra suggest that the λ_max of dimer is 255 nm. The oscillator strength of the imino forms is less than the amino form, and increases with the polarity of the solvents. All calculations for the tautomerization of 2‐aminothiazole are in reasonable line with the available experiments. © 2006 Wiley Periodicals, Inc. Int J Quantum Chem, 2007     

Substituent effects on the tautomer ratios between the enamine and methylene imine forms in side-chained quinoxalines

The p- and m-substituted 3-arylcarbamoylmethylene-2-oxo-1,2,3,4-tetrahydroquinoxalines 3a-o showed the tautomeric equilibria between the enamine C and methylene imine D forms in dimethyl sulfoxide or dimethyl sulfoxide/trifluoroacetic acid media. The linear correlation of the Hammett σ_p and σ_m values with the log K_T values was observed in the dimethyl sulfoxide/trifluoroacetic acid (2:1) media of compounds 3a-o , wherein K_T meaned the tautomeric equilibrium constants ([D]/[C]).     

Tautomerism of monochalcogenosilanoic acids CH3Si(O)XH (X = S,Se, Te) in the gas phase and in the polar and aprotic solution: An ab initio computational investigation

Computational investigations by an ab initio molecular orbital method (HF and MP2) with the 6‐311+G(d,p) and 6‐311++G(2df, 2pd) basis sets on the tautomerism of three monochalcogenosilanoic acids CH₃Si(?O)XH (X = S, Se, and Te) in the gas phase and a polar and aprotic solution tetrahydrofuran (THF) was undertaken. Calculated results show that the silanol forms CH₃Si(?X)OH are much more stable than the silanone forms CH₃Si(?O)XH in the gas‐phase, which is different from the monochalcogenocarboxylic acids, where the keto forms CH₃C(?O)XH are dominant. This situation may be attributed to the fact that the Si? O and O? H single bonds in the silanol forms are stronger than the Si? X and X? H single bonds in the silanone forms, respectively, even though the Si?X (X = S, Se, and Te) double bonds are much weaker than the Si?O double bond. These results indicate that the stability of the monochalcogenosilanoic acid tautomers is not determined by the double bond energies, contrary to the earlier explanation based on the incorrect assumption that the Si?S double bond is stronger than the S?O double bond for the tautomeric equilibrium of RSi(?O)SH (R?H, F, Cl, CH₃, OH, NH₂) to shift towards the thione forms [RSi(?S)OH]. The binding with CH₃OCH₃ enhances the preference of the silanol form in the tautomeric equilibrium, and meanwhile significantly lowers the tautomeric barriers by more than 34 kJ/mol in THF solution. © 2007 Wiley Periodicals, Inc. Int J Quantum Chem, 2008     

Theoretical studies on pteridines. 2. Geometries,tautomer, ionization and reduction energies of substrates and inhibitors of dihydrofolate reductase

Ab initio SCF calculations with STO-3G and 3-21G basis sets are reported for approximately 85 pteridines of interest to the study of the reaction and inhibition mechanisms of dihydrofolate reductase. These include tautomeric, protonated, deprotonated, reduced and 6-substituted forms of the 2-amino-4-oxo- and 2,4-diamino-pteridines, many of which are not easily amenable to experimental investigation. Full geometry optimizations at the SCF/STO-3G level for 30 such pteridines have been performed. A step-wise computational protocol designed to identify the minimum level of theory necessary for reliable prediction of relative tautomer, reduction and ionization energies has been developed in an effort to minimize the cost of calculations for this reasonably large N-heterobicylic system. In general, SCF/STO-3G results were found to be inadequate while SCF/3-21G results obtained with STO-3G optimized geometries agreed with all available experimental evidence with the exception of the relative acidity of 6-methyl-7,8-dihydropterin. Correlation graphs relating experimental pK_a's to the calculated ionization energies are presented: these are of potential predictive value. An analysis is given of the importance of resonance substructures, such as the guanidinium and extended-guanidinium groups, in stabilizing some preferred tautomeric and ionized forms, and in explaining the observed geometry changes.     

Tautomeric and Conformational Isomerism of Mercaptoacetylhydrazones of Methyl Alkyl Ketones

Mercaptoacetylhydrazones of methyl alkyl ketones (Alk = Me, Et, Pr, i-Pr, i-Bu, s-Bu, t-Bu) exist in solutions as a tautomeric mixture of linear and cyclic 1,3,4-thiadiazine forms.The linear hydrazone form exists as a set of conformers caused by restricted rotation of the amide group relative to the C–N bond. It is shown that tautomeric equilibrium constants correlate with the steric constants of the alkyl substituents, E_S.     

Copper(II), iron(III), and chromium(III) complexes with 5,10-dioxo-4,5,9,10-tetrahydro-4,9-diazapyrene derivatives

Six copper(II), iron(III), and chromium(III) complexes with 5,10-dioxo-4,5,9,10-tetrahydro-4,9-diazapyrene derivatives (H₂L¹-H₂L³) have been synthesized and studied by physical methods (IR and electronic absorption spectroscopy, quantum-chemical calculations). The composition of the complexes has been determined and their stability constants in aqueous dimethylformamide solutions have been calculated. The energy characteristics, electronic structure and geometry of isolated diazapyrenes and their tautomeric forms have been calculated by the PM6 method, and their complexes have been modeled.     

A TDDFT study of the optical response of DNA bases, base pairs, and their tautomers in the gas phase

We present calculations of the optical response of the DNA bases and base pairs both in their normal and tautomeric forms in the gas phase, using time-dependent density functional theory (TDDFT). These calculations are performed in real time within the adiabatic approximation with a basis of local orbitals. Our results for the individual bases are in good agreement with experiment and computationally more demanding calculations of chemical accuracy. The optical response of base pairs indicates that the differences between normal and tautomeric forms in certain cases are significant enough to provide a means of identification.     

Structural properties and potential reactivity of substituted 3- aroyldithiocarbazates

A series of substituted 3-aroyldithiocarbazates has been synthesized and studied. The corresponding acid dissociation constants have been determined potentiometrically. Semiempirical PM3 molecular orbital calculations suggest the existence of several tautomeric forms of the compounds. Geometrical parameters, proton affinities, and static reactivity indices have been examined. Structural properties and protonation sites are well described by calculations. The strong correlations between the pK _a values and the Hammett constants as well as the N(3) calculated proton affinities indicate that the N(3) atom is the most probable protonation site. The thermodynamics of the protonation process are mainly controlled by HOMO-LUMO rather than electrostatic interactions. According to PM3 results, 3-aroyldithiocarbazic acid should be quite stable in the gas phase, while a mechanism for its decomposition in solution is proposed.     

1H and 13C NMR study of the enol–enolic tautomerism of some cyclic β-ketoaldehydes

Aldehyde (δCH) and enolic (δOH) proton chemical shifts, the corresponding spin–spin coupling constants (JCH,OH) and the ¹³C chemical shifts (δC) have been measured for three cyclic β-ketoaldehydes as a function of temperature. A tautomeric equilibrium has been shown to exist between the aldo–enol ( A ) and hydroxymethylene ketone ( B ) forms. The chemical shifts δCH δOH and δC for the two pure tautomeric forms A and B have been calculated. The enthalpy changes ΔH in the tautomeric process A ? B and the percentages of the tautomeric forms have been determined.     

Substituent effects on the tautomer ratios between the hydra-zone imine and diazenyl enamine forms in 3-(arylhydra-zono)methyl-2-oxo-1,2-dihydroquinoxalines. Correlation of the hammett constants σp with the tautomeric equilibrium constants KT

The 3-(arylhydrazono)methyl-2-oxo-1,2-dihydroquinoxalines 1a-e and 2a-i showed tautomeric equilibria between the hydrazone imine A and diazenyl enamine B forms in dimethyl sulfoxide media. The sub-stituent effects on the tautomer ratios of A to B in compounds 1a-e and 2a-i were studied by the nmr spec-troscopy. The electron-donating or electron-withdrawing p-substituents R¹ in compounds 2a-i represented a tendency to increase the ratios of the tautomer A or the tautomer B , respectively, exhibiting the linear correlation of the Hammett constants σ_p (-0.17 to +0.78) with the tautomer ratios of A to B or the tautomeric equilibrium constants K_T. However, the presence of the ester group R² in compounds 1a-e induced the exclusive existence of the tautomer A regardless of the nature of the p-substituents R¹. In the tautomeric thermodynamic study, the elevating temperature increased the ratios of the hydrazone imine tautomer A in compounds 2a-i . The tautomeric thermodynamic parameters ΔG°, ΔH° and ΔS° were derived from the van't Hoff plots for compounds 2a , b , h , i , wherein the entropy term dominated the free-energy difference between the A and B tautomers.     

13C NMR and structural study of solid state naphthol-1 and naphthol-2 arylazo-derivatives

Solid state ¹³C NMR spectra of a series of naphthol-1 and naphthol-2-arylazo-derivatives were studied and compared with respective results in solutions. Signals of carbon nuclei of naphthalene ring were assigned. Tautomeric forms of compounds were determined. It was shown that 4-(p-NO₂C₆H₄)-azonaphthol-1 and 1-(p-NO₂C₆H₄)-azonaphthol-2 in solid state existed exclusively in quinohydrazone form. The other two compounds—1-(C₆F₅)-azonaphthol-2 and 2-(p-CH₂C₆H₄)-azonaphthol-1 in solid state were not found in the form of individual tautomeric mixtures but in respective tautomeric equilibrium form. Thus, during transition from liquid to solid state, the tautomeric equilibrium was practically unchanged. In solid state it was found that rotation around aryl-N bond was hindered in the time scale of NMR spectroscopy.     

顺铂化合物与鸟嘌呤异构体相互作用的理论研究

The influence of binding of cisplatin adducts on tautomeric equilibrium of guanine was investigated using quantum chemical method. The monoaqua adduct [Pt（NH3）2Cl（H2O）]^＋ and the diaqua adduct [Pt（NHa）2（H2O）2]^2＋ were chosen for coordination to the N（7） site of guanine tautomers. The results demonstrate that the platinum adducts influence moderately on tautomeric equilibrium, but do not change the relative stability of tautomers whether in gas phase or in aqueous solution. The keto form having H atom at N（1） and N（9） was always the predominant structure when cisplatin adducts were bound to guanine. However, other forms could coexist in water. Meanwhile, our calculations suggest that the tautomeric equilibrium should be via the same intermediate.     

Lipophilicity Behavior of Model and Medicinal Compounds containing a suilfide,sulfoxide, or sulfone moiety

This study was designed to unravel lipophilicity changes associated with the oxidation state of the S-atom in model compounds, drugs, and metabolites, special attention being given both to intermolecular and intramolecular effects. The methods used were experimental (potentiometry, CPC, and shake-flask techniques to measure lipophilicity, ¹³C-NMR spectroscopy to investigate tautomeric equilibria) and computational (quenched molecular dynamics and molecular lipophilicity potential). Simple, monofunctional model compounds were used to assess intermolecular forces, as revealed by the Δlog P_oct–alk and Δlog P_oct–chf parameters. Drugs and their metabolites proved to be good probes to study intramolecular effects in both neutral and anionic forms, as revealed by the difference between calculated and experimental log P_oct values (the diff(log P^exp–calc) parameter). Sulindac and its metabolites showed a normal partitioning behavior, whereas the lipophilicity of sulfmpyrazone and its metabolites' was markedly affected by tautomeric and conformational equilibria.     

Tautomeric forms of Oxy- and Oxo-derivatives of 1,3,5-Triazine. Part VI. Isomerization mechanism and thermal stability of the methyl esters of cyanuric acid

Previous investigations of the kinetics and the mechanism of the thermal isomerization C₃N₃(OMe)₃ → C₃(NMe)₃O₃ have been continued with a study of the isomerization mechanism of the mixed O,O,N- and O,N,N-trimethyl esters of cyanuric acid. A full discussion of the overall process is given, in which it is assumed that the above mixed esters are intermediates. It is shown that the tautomeric transformation occurs as the consequence of the attack of Me⁺ cations on the ring nitrogen of the neutral molecules. The presence of such cations in the melt was established by ionic exchange with the H⁺ of the molten acids. It is also shown that the tautomeric transformation in solution proceeds with the same mechanism. An explanation is proposed for the thermal instability of the mixed esters (which isomerize even in the solid state, more than 20° below their melting point), which is based on the high polarity of these molecules. This property is discussed in terms of electronic structure calculations carried out with the Pariser-Parr-Pople approximation of the A.S.M.O., S.C.F., method.     

Spectroscopic and quantum chemical studies of isocytosine

The methods of electronic and vibrational (IR) spectroscopy were used to study the spectral properties of isocytosine in H₂O, D₂O, chloroform, and hexane in a wide concentration interval. Quantum chemical calculations of tautomeric forms and dimers of isocytosine were carried out. The bands of the calculated and experimental spectra were assigned. The results of the quantum calculations were compared with the experimental data. The spectral bands were classified according to the type of tautomer or dimer to which they belong.Translated from Teoreticheskaya i éksperimental'naya Khimiya, Vol. 24, No. 1, pp. 29–36, January–February, 1988.The authors are grateful to I. M. Ginzberg and L. F. Strelkova for their participation in the discussion of the infrared spectroscopy results.     

Quantum-chemical study of the structure and reactivity of 4,5-dihydropyrazol-5-ones and their thio and seleno analogs: VIII. Solvation effects and tautomerism of 4,5-dihydropyrazol-5-ones and their thio and seleno analogs

The effect of hydration on the stability of tautomeric forms of 1-methyl-4,5-dihydro-1H-pyrazol-5-one, 1-methyl-4,5-dihydro-1H-pyrazole-5-thione, and 1-methyl-4,5-dihydro-1H-pyrazole-5-selone was analyzed by nonempirical quantum-chemical methods at different theory levels. The results of calculations by all these methods, including density functional theory, with two types of models (continuum and discrete) showed stronger stabilization of the NH tautomers of all the examined heteropyrazolones in water, as compared to their CH and XH tautomers. The strongest stabilization effect is reached in the calculation of discrete complexes in terms of the self-consistent reaction field model. The degree of differentiation of the stability of tautomeric forms considerably decreases when electronic correlation is taken into account, whereas the use of polarization functions on hydrogen atoms in addition to polarization functions on heavy atoms almost does not affect the position of the tautomeric equilibrium.