QUENCHING OF TYROSINE FLUORESCENCE BY PHOSPHATE IONS: A MODEL STUDY FOR PROTEIN-NUCLEIC ACID COMPLEXES

Abstract— In order to test the ability of phosphate groups to quench the tyrosine fluorescence in nucleic acid-protein complexes, we have studied the effect of several phosphate ions on the fluorescence of tyrosine derivatives. Mono and bianions (H₂PO₄ and HPO₄^2–) which are good proton acceptors quenched the fluorescence of all the phenolic compounds studied except that of O -methyl tyrosine. With the other derivatives (tyrosine, N -acetyl tyrosinamide and lysyl-tyrosyl-α lysine) fluorescence inhibition was accompanied by the appearance of a long wavelength emission (345 nm) attributed to tyrosinate anions. The quenching of tyrosine emission was due to the deprotonation of the phenolic group promoted in the excited state by phosphate ions and leading to the weakly fluorescent tyrosinate ion. Mono and dianions of phosphate mono ester inhibited tyrosine fluorescence as did unesterified phosphates. However, phosphate diester did not have any effect on the fluorescence of tyrosine derivatives. We conclude from this study that in nucleic acid-protein complexes phosphate groups are not able to quench tyrosine fluorescence except at the end of polynucleotide chains. Since monoester and diester monoanions have a different behavior, we propose that quenching of tyrosine fluorescence by monoanions requires the formation of two hydrogen bonds. This complex cannot form with diesters which consequently do not quench tyrosine fluorescence.     

Speciation, luminescence, and alkaline fluorescence quenching of 4-(2-methylbutyl)aminodipicolinic acid (H2MEBADPA)

4-(2-Methylbutyl)aminodipicolinic acid (H(2)MEBADPA) has been synthesized and fully characterized in terms of aqueous phase protonation constants (pK(a)'s) and photophysical measurements. The pK(a)'s were determined by spectrophotometric titrations, utilizing a fully sealed titration system. Photophysical measurements consisted of room temperature fluorescence and frozen solution phosphorescence as well as quantum yield determinations at various pH, which showed that only fully deprotonated MEBADPA(2-) is appreciably emissive. The fluorescence of MEBADPA(2-) has been determined to be quenched by hydroxide and methoxide anions, most likely through base-catalyzed excited-state tautomerism or proton transfer. This quenching phenomenon has been quantitatively explored through steady-state and time-resolved fluorescence measurements. Utilizing the determined pK(a)s and quenching constants, the fluorescent intensity of MEBADPA(2-) has been successfully modeled as a function of pH.     

Dynamics of the tyrosine triplet state from magnetic resonance-saturated phosphorescence decay measurements

Analysis of the phosphorescence decays measured during magnetic resonance saturation of sublevel populations has been carried out on tyrosine and tyrosinate triplet states at 1.17°K in zero field. The individual sublevel decay constants and spin-lattice relaxation rate constants are derived. Relative intersystem crossing rates to the sublevels are obtained from flash excitation microwave-induced delayed phosphorescence measurements. Intersystem crossing is not spin-selective in tyrosine, but becomes so upon ionization near pH = 12. The spin-selective intersystem crossing mechanism in tyrosinate is discussed in terms of a model proposed by Bersohn.     

EFFECT OF PHOSPHATE ION ON FLUORESCENT CHARACTERISTICS OF TYROSINE AND ITS CONJUGATE BASE

Abstract—The UV fluorescence spectrum of tyrosine (Tyr) is markedly affected by the interaction with phosphate ion. In order to elucidate the mechanism of the specific fluorescence quenching by phosphate and the simultaneous appearance of a new emission, the effect of phosphate on the spectro-scopic characteristics of Tyr was investigated. Employing a fluorimetric method, we have obtained the following results. Namely, potassium phosphate was found to enhance the fluorescence intensity of tyrosinate ion. When Tyr is excited in the phosphate-containing solution, the emission with a peak around 345 nm is observed besides the normal fluorescence of Tyr around 303 nm with a reduced quantum yield. The abnormal emission may be ascribed to the tyrosinate ion in the excited state resulting from the deprotonation of the phenolic OH group of the excited Tyr. although the tyrosinate ion in the ground state is not predominant in the aqueous solution examined.     

TD-DFT study on fluoride-sensing mechanism of 2-(2'-phenylureaphenyl)benzoxazole: the way to inhibit the ESIPT process

The fluoride-sensing mechanism of the sensor 2-(2'-phenylurea-phenyl)benzoxazole (PUBO) has been investigated by means of the TD-DFT method. The present theoretical study indicates that there is an excited-state intramolecular proton transfer (ESIPT) process in the sensor PUBO. The added fluoride anion could capture the proton in the free N-H moiety instead of the hydrogen-bonding one. The experimental UV/Vis and fluorescence spectra (J. Org. Chem. 2007, 72, 62) are well reproduced by the calculated vertical excitation energies in the ground state and the first singlet excited state. For example, the calculated emission wavelength of PUBO at 534 nm is very close to the fluorescence band at 554 nm. Furthermore, we theoretically confirmed that the added fluoride anions could inhibit the ESIPT process in PUBO. But different from the classical ESIPT-inhibition mechanism, the ESIPT process in the sensor PUBO is inhibited by the high energy barrier of its deprotonated form rather than by the absence of the transferred proton.     

Proton translocation and electronic relaxation along a hydrogen-bonded molecular wire in a 6-hydroxyquinoline/acetic acid complex

A hydrogen-bonded network formed between 6-hydroxyquinoline (6-HQ) and acetic acid (AcOH) has been characterized using a time-resolved fluorescence technique. In the bridged hydrogen-bonded complex of cis-6-HQ and AcOH, an excited-state reaction proceeds via proton transfer along the hydrogen bond, resulting in a keto-tautomer (within approximately 200 ps) that exhibits large Stokes-shifted fluorescence. The unbridged complex also undergoes excited-state proton transfer, but the Stokes shift is rather smaller.     

Ratiometric fluorescence anion sensor based on inhibition of excited-state intramolecular proton transfer (ESIPT)

A colorimetric and ratiometric fluorescence anion sensor 1 was designed and synthesized according to site-signalling subunit approach. The sensor exhibited visible color changes from yellow to purple upon addition of the strong basic anions such as acetate. The ratiometric fluorescence changes with significant blue shift about 140 nm were observed during the fluorescence titrations. Such ratiometric fluorescence changes could be due to inhibition of excited-state intramolecular proton transfer (ESIPT). The ¹H NMR titrations indicated that the sensor 1 showed deprotonation in presence of large amounts of acetate ion. Therefore, ESIPT was inhibited owing to presence of deprotonation of phenol unit.     

Ground- and excited-state intramolecular proton transfer in 3,5-dibromosalicylic acid

The existence of both ground- and excited-state proton transfer equilibrium between the enolic and keto tautomers of 3,5-dibromosalicylic acid has been investigated in aqueous solution using electronic absorption and luminescence emission spectroscopies, together with ab initio and semiempirical MO/CI calculations. The compound provides an example of a room temperature phosphorescence triplet-state emission from a phototautomer (ketonic) form. The interference from radiationless paths, which may in principle avoid the observation of the phosphorescence signal, was overcome by using a protective micellar medium and the presence of an external heavy atom.     

Excited-state double proton transfer dynamics of model DNA base pairs: 7-hydroxyquinoline dimers

The excited-state double proton transfer of model DNA base pairs, 7-hydroxyquinoline dimers, in benzene has been investigated using picosecond time-resolved fluorescence spectroscopy. Upon excitation, whereas singly hydrogen-bonded noncyclic dimers do not go through tautomerization within the relaxation time of 1400 ps, doubly hydrogen-bonded cyclic dimers undergo excited-state double proton transfer on the time scale of 25 ps to form tautomeric dimers, which subsequently undergo a conformational change in 180 ps to produce singly hydrogen-bonded tautomers. The rate constant of the double proton transfer reaction is temperature-independent, showing a large kinetic isotope effect of 5.2, suggesting that the rate is governed mostly by tunneling.     

Photo-induced relaxation and proton transfer in some hydroxy naphthoic acids in polymers

Photophysical and photochemical properties of 3-hydroxy-2-naphthoic acid [3,2-HNA] and 1-hydroxy-2naphthoic acid [1,2-HNA] in different aprotic, protic, and ion exchange (Nafion) polymers have been described in this article. In both molecules, intramolecular hydrogen bond (IMHB) exists between OH and COOH functional groups. Both 3,2-HNA and 1,2-HNA form different emitting species in different polymeric media. Fluorescence characteristic of 3,2-HNA is found to depend on its concentration, nature of the microenvironment, and wavelength of excitation, while 1,2-HNA is less susceptible to these changes. 3,2-HNA exhibits dual fluorescence band (normal and large Stokes shifted) in aprotic and only a single large Stokes shifted fluorescence in protic polymers, while 1,2-HNA shows a single fluorescence band along with weak phosphorescence emission in these polymers. Both excited-state inter and intramolecular proton transfer (ESPT) take place in 3,2-HNA in aprotic and protic polymers, resulting in large Stokes shifted emission band. A competition between ESIPT and excimer formation is observed by the appearance of rise time on increasing the concentration of 3,2-HNA in protic polymer. In Nafion film, 3,2-HNA is present as a cationic as well as neutral species. The presence of extra protons in Nafion film facilitates excited-state intramolecular proton transfer (ESIPT) in the neutral species of 3,2-HNA and gives large Stokes shifted emission (10 500 cm(-1)). No such effect is observed in 1,2-HNA doped in Nafion film. It is observed that, depending on the position of the IMHB ring, the electronic spectra get modified and the strength of IMHB is affected by the micro-environment of the polymer which alters the photophysics of these molecules.     

6-甲基-4-羟基嘧啶单体及二聚体激发态质子转移异构化反应及光谱的理论研究

采用ab initio HF理论的组态相关CIS方法和连续溶剂模型PCM, 分别在6-311+G*和6-31G水平上研究了6-甲基-4-羟基嘧啶单体及二聚体激发态质子转移的异构化反应; 对其反应势能面的研究发现, 单体基态和激发态的异构化反应一起可以形成四能级的分子电子体系, 而二聚体的却不能, 由此解释了单体和二聚体的紫外吸收光谱和荧光发射光谱均对应于酮式构型的原因. 利用混合含时密度泛函TD/MPW1PW91理论方法在溶剂存在下计算了标题物质的紫外吸收光谱和荧光发射光谱.     

Excited-state proton transfer of 3-hydroxybenzoic acid and 4-hydroxybenzoic acid

The excited-state proton transfer of 3-hydroxybenzoic acid and 4-hydroxybenzoic acid was studied by time-resolved laser-induced fluorescence spectroscopy with ultra-short laser pulses. The excited-state reactions were identified in aqueous media as a function of the pH value. Apart from the well-known inversion of the ordinary dissociation properties of these compounds, new species were found which exist only in the excited-state resulting from a temporal and reversible annihilation of the aromatic bond system. These species and their reaction mechanisms were detected by their absorption and fluorescence spectra.     

Proton transfer reaction of a new orthohydroxy Schiff base at room temperature and 77 K

One new orthohydroxy Schiff base, 2-(N-benzyl-alpha-iminoethyl)naphthol (BEIN) has been synthesized. The proton transfer reaction of BEIN has been investigated by means of absorption, steady state and time resolved fluorescence spectroscopy in different solvents at room temperature and 77K. The behavior of BEIN in ethanol and water, has been studied in neutral, acidic and basic conditions. Excited state intramolecular proton transfer (ESIPT) is evidenced by a large Stokes shifted ( approximately 11,000 cm-1) fluorescence in solid crystalline media at room temperature. We present the observation of phosphorescence both in non-polar and protic solvents at 77K. The observed decay dynamics of the phosphorescence and delayed fluorescence indicates that the triplet state can be attributed to the cis-keto form. The molecular structures are determined by B3LYP/6-31G** calculation. From theoretical study it is suggested that the strengthening of hydrogen bond result from the steric repulsion of the phenyl ring. The presence of benzene ring increases the proton transfer barrier in case of BEIN compared to previously studied 7-ethylsalicylidenebenzylamine (ESBA).     

Ultrafast proton transfer dynamics of hydroxystilbene photoacids

The effects of 4-cyano and 3-cyano substituents on the spectroscopic properties and photoacidity of 3- and 4-hydroxystilbene have been investigated. In nonpolar solvents, the 3-hydroxycyanostilbenes have much longer singlet lifetimes and larger fluorescence quantum yields than do the 4-hydroxycyanostilbenes. The longer lifetimes of 3-hydroxystilbene and its cyano derivatives are attributed to a "meta effect" on the stilbene torsional barrier, similar to that previously observed for the aminostilbenes. The cyano substituent causes a marked increase in both ground state and excited-state acidity of the hydroxystilbenes in aqueous solution. The dynamics of excited-state proton transfer in methanol-water solution have been investigated by means of femtosecond time-resolved transient absorption spectroscopy. Assignment of the transient absorption spectra is facilitated by comparison to the spectra of the corresponding potassium salts of the conjugate bases and the methyl ethers, which do not undergo excited-state proton transfer. The 4-cyanohydroxystilbenes undergo excited-state proton transfer with rate constants of 5 x 10(11) s(-1). These rate constants are comparable to the fastest that have been reported to date for a hydroxyaromatic photoacid and approach the theoretical limit for water-mediated proton transfer. The isotope effect for proton transfer in deuterated methanol-water is 1.3 +/- 0.2, similar to the isotope effect for the dielectric response of water. The barrier for excited state double bond torsion of the conjugate bases is small for 4-cyano-4-hydroxystilbene but large for 4-cyano-3-hydroxystilbene. Thus the "meta effect" is observed for the singlet states of both the neutral and conjugate base.     

Excited-state proton transfer in 2-(2'-hydroxyphenyl)benzothiazole: formation of the anion in polar solvents

Excited-state proton transfer in 2-(2'-hydroxyphenyl)benzothiazole (HBT) dissolved in pyridine is investigated. New absorptions and fluorescence bands are detected after addition of water or NaOH to the solution. The spectra are identical to the HBT anion absorption and fluorescence. Picosecond spectroscopy is used to determine the kinetics of electronically excited states. The excited-state lifetime of the anion is 3.5 ns. The tautomeric fluorescence of HBT after proton transfer builds up within 4 ps after excitation and decays with a time constant of 20 ps.     

The dynamic process in the formation of Tyr/LDH nanohybrids

The dynamic intercalation process of tyrosine (Tyr) into layered double hydroxide (LDHs) by co-precipitation method was investigated by powder X-ray diffractometry, Fourier transform infrared spectroscopy, specific surface area measurements, pore size distributions as well as thermal analysis. The nanohybrids were found to have an expanded layered structure indicating that amino acid anions were intercalated into the gallery space. Two kinds of arrangements such as mono- or bilayers of the tyrosinate anions could be deduced from the XRD patterns. The arrangement changed from monolayer to bilayer, then again to monolayer with increasing aging time of the synthesis solution. The diffraction intensity increased then decreased with aging time, because of the variation in the orientation and ordering of the particles. TG analysis and the varying M²⁺/M³⁺ results revealed that the amount of tyrosinate anions in the gallery first decreased then increased with the increase of aging time. In addition, the morphology results showed that the degree of ordering also increased then decreased with aging time. On all accounts, the intercalation of the tyrosinate anions was a typical dynamic process. At the beginning numerous biomolecules entered the gallery space, giving rise to increased basal spacings and BET surface areas. Later the increase of aging time led to the escape of amino acid anions from the gallery space, hence to the decrease of basal spacing and surface areas.     

Observation of slow charge redistribution preceding excited-state proton transfer

The photoacid 8-hydroxy-N,N,N',N',N',N'-hexamethylpyrene-1,3,6-trisulfonamide (HPTA) and related compounds are used to investigate the steps involved in excited-state deprotonation in polar solvents using pump-probe spectroscopy and time correlated single photon counting fluorescence spectroscopy. The dynamics show a clear two-step process leading to excited-state proton transfer. The first step after electronic excitation is charge redistribution occurring on a tens of picoseconds time scale followed by proton transfer on a nanosecond time scale. The three states observed in the experiments (initial excited state, charge redistributed state, and proton transfer state) are recognized by distinct features in the time dependence of the pump-probe spectrum and fluorescence spectra. In the charge redistributed state, charge density has transferred from the hydroxyl oxygen to the pyrene ring, but the OH sigma bond is still intact. The experiments indicate that the charge redistribution step is controlled by a specific hydrogen bond donation from HPTA to the accepting base molecule. The second step is the full deprotonation of the photoacid. The full deprotonation is clearly marked by the growth of stimulated emission spectral band in the pump-probe spectrum that is identical to the fluorescence spectrum of the anion.     

Two competitive routes in the lactim-lactam phototautomerization of a hydroxypyridine derivative cation in water: dissociative mechanism versus water-assisted proton transfer

Ground-state tautomerism and excited-state proton-transfer processes of 2-(6'-hydroxy-2'-pyridyl)benzimidazolium in H2O and D2O have been studied by means of UV-vis absorption and fluorescence spectroscopy in both steady-state and time-resolved modes. In the ground state, this compound shows a tautomeric equilibrium between the lactim cation, protonated at the benzimidazole N3, and its lactam tautomer, obtained by proton translocation from the hydroxyl group to the pyridine nitrogen. Direct excitation of the lactam tautomer leads to its own fluorescence emission, while as a result of the increase of acidity of the OH group and basicity at the pyridine N upon excitation, the lactim species undergoes a proton translocation from the hydroxyl group to the nitrogen, favoring the lactam structure in the excited state. No fluorescence emission from the initially excited lactim species was detected due to the ultrafast rate of the excited-state proton-transfer processes. The lactim-lactam phototaumerization process takes place via two competitive excited-state proton-transfer routes: a one-step water-assisted proton translocation (probably a double proton transfer) and a two-step pathway which involves first the dissociation of the lactim cation to form an emissive intermediate zwitterionic species and then the acid-catalyzed protonation at the pyridine nitrogen to give rise to the lactam tautomer.     

Excited-state double proton transfer of 7-azaindole dimers in a low-temperature organic glass

The excited-state double proton transfer of model DNA base pairs, 7-azaindole (7AI) dimers, is explored in a low-temperature organic glass of n-dodecane using picosecond time-resolved fluorescence spectroscopy. Reaction mechanisms are found to depend on the conformations of 7AI dimers at the moment of excitation; whereas planar conformers tautomerize rapidly (<10 ps), twisted conformers undergo double proton transfer to form tautomeric dimers on the time scale of 250 ps at 8 K. The proton transfer is found to consist of two orthogonal steps: precursor-configurational optimization and intrinsic proton transfer via tunneling. The rate is almost isotope independent at cryogenic temperatures because configurational optimization is the rate-determining step of the overall proton transfer. This optimization is assisted by lattice vibrations below 150 K or by librational motions above 150 K.     

A New Series of Proton/Charge Transfer Molecules: Synthesis and Spectral Studies of 2-(5-Aryl-1-carbomethoxy-1H-pyrazol-3-yl)phenols

Abstract. The carbomethoxyhydrazone of 2'-hydroxyacetophenone was trilithiated with excess lithium diisopropylamide and C-acylated with a variety of benzoate esters followed by acid cyclization of the intermediates to 2-(5-aryl-l-car-bomethoxy-lHpyrazol-3-yl)phenols [3-(2-hydroxyphen-yl)-lH-pyrazoles]. The products were characterized by Fourier transform-IR, ^lH NMR, ¹³C NMR, UV-visible absorption and fluorescence. All the derivatives in n -heptane have an absorption maximum at ˜304 nm and an extremely weak (φ_r= 10 ⁴) fluorescence with maxima in the range of 335–460 nm. The broad range of fluorescence maxima and fluorescence quantum yields is attributed to varying contributions of charge transfer that are dependent on both the identity of the substituent and solvent polarity. A phenomenally large Stokes-shifted fluorescence maximum at 620 nm was observed for 2-(l-car-bomethoxy-5-[4-dimethylaminophenyl]-lff-pyrazol-3-y1)phenol in n-heptane and attributed to excited-state intramolecular proton transfer. As a result, competitive excited-state proton/charge transfer properties have been observed in the pyrazoles studied, of which the spectral properties can be fine tuned by substituent as well as solvent effects.