Densities and Partial Molar Volumes of Some Amino Acids and Diglycine in Aqueous n-Propanol Solutions at 25°C

Apparent molar volumes, V , of glycine, DL--alanine, DL--amino-n-butyric acid, L-valine, L-leucine, and diglycine in water and in 1.0, 2.0, 3.0, 4.0, 5.0, and 6.0 m _B [molality of n-propanol in water (mol-kg^–1)] aqueous solutions of n-propanol have been obtained from densities of their solutions at 25 °C measured by using a precise vibrating-tube digital densimeter. The calculated partial molar volumes of amino acids and diglycine at infinite dilution, V _2,m ^o , have been used to obtain the corresponding transfer volumes, _tr V _2,m ^o , from water to different n-propanol–water mixtures. _tr V _2,m ^o values are positive for glycine, DL-- alanine, and diglycine (except at lower concentration 1.0 m _B ), negative for L-valine, and both positive and negative for the remaining amino acids over the concentration range studied. The side-chain contributions and hydration numbers have been calculated from V _2,m ^o data. Interaction coefficients have also been obtained from the McMillan–Mayer approach and the data have been interpreted in terms of various interactions.     

Effect of the Composition of the Aqueous Organic Solvent on the Kinetics of N-Acylation of α-Amino Acids with 4-Nitrophenyl 4-Nitrobenzoate

Equations relating the N-acylation rate constants of glycine, L--alanine, DL-threonine, and L-proline with 4-nitrophenyl 4-nitrobenzoate in water-acetonitrile, water-2-propanol, and water-2-methyl-2-propanol solvents to the composition of the medium were obtained, and reaction rate constants in water were calculated.     

Effect of the Charge and the Nature of Both Cations and Anions on the Solubility of Zwitterionic Amino Acids,Measurements and Modeling

The effect of the charge and the nature of both the cations and the anions of some electrolytic salts: sodium fluoride (NaF), potassium fluoride (KF), sodium bromide (NaBr), potassium bromide (KBr), sodium iodide (NaI), potassium iodide (KI), sodium sulfate (Na₂SO₄), potassium sulfate (K₂SO₄), calcium chloride (CaCl₂), and barium chloride (BaCl₂), on the solubility of zwitterionic amino acids (glycine, DL-alanine, DL-valine, and DL-serine) in aqueous solutions at 298.15 K are studied and discussed. A salting-in effect is observed for all amino acids under investigation with all electrolytes used in the present study, except for DL-alanine and DL-valine in aqueous solutions containing sodium fluoride where a salting-out effect was observed. The orders of the effect of the nature and the charge of both the anions and the cations are: F^- < Cl^- < Br^- < I^- < NO₃^- < SO₄^2-\mathrm{F}^{-}<{}\mathrm{Cl}^{-}<{}\mathrm{Br}^{-}<{}\mathrm{I}^{-}<\mathrm{NO}_{3}^{-}<{}\mathrm{SO}_{4}^{2-} with both sodium and potassium cations; Na⁺<K⁺<Ca²⁺<Ba²⁺ with chloride anion.     

The Effect of β-Nitro Group on the Reactivity and the Stereoselectivity of Amidation of Bicyclic Acids by Dehydration with DCC

Amidation of exo/endo mixture of β-nitro bicyclic acids by dehydration with DCC, gives only the corresponding exo-amides.     

On the Effect of the Aglycon Structure of Three Aryl β-D-Galactosides on the Yield and the Regioselectivity of the Transglycolytic Synthesis of N-Acetyllactosamine

ABSTRACT

We examined the effect as donors of three aryl β-D-galactosides (i.e. p-nitrophenyl β-D-galactopyranoside, o-nitrophenyl β-D-galactopyranoside and phenyl β-D-galacto-pyranoside) on the regioselectivity and the yield of the synthesis of N-acetyllactosamine obtained from the transglycosylation reaction catalyzed by a crude preparation of β-D-galactosidase from Bacillus circulans at 25 °C, 37 °C and 55 °C, respectively. Using p-nitrophenyl β-D-galactopyranoside the reaction results were fully regiospecific at all the temperatures considered: the maximum molar yield (74%) was obtained at an incubation temperature of 55 °C. Using o-nitrophenyl β-D-galactopyranoside as the donor the reaction was still highly regioselective and the maximum molar yield (50%) was achieved at an incubation temperature also of 55 °C. Using phenyl β-D-galactopyranoside transglycolytic products appear only at an incubation temperature of 55 °C but at very low molar yield (about 14%) and lower regioselectivity.     

Heat Effect of the Protonation of Glycine and the Enthalpies of Resolvation of Participating Chemical Species in Water–Dimethylsulfoxide Solvent Mixtures

Enthalpies of the protonation of glycine in water?dimethylsulfoxide (DMSO) mixed solvents are determined calorimetrically in the range of DMSO mole fractions of 0.0 to 0.9, at T = 298.15 K and an ionic strength μ = 0.3 (NaClO₄). It is established that the protonation of glycine becomes more exothermic with an increasing mole fraction of DMSO, and the enthalpies of resolvation of glycine and glycinium ions in water?DMSO solvent mixtures are calculated. It is shown that the small changes in the enthalpy of protonation observed at low mole fractions of DMSO are caused by the contributions from the solvation of proton and protonated glycine cancelling each other out. The enthalpy term of the Gibbs energy of the reaction leading to the formation of glycinium ion is estimated along with the enthalpy of resolvation of the reacting species in the water?DMSO mixed solvent.     

Partial Molar Volumes of Amino Acids and Peptides in Aqueous Salt Solutions at 25°C and a Correlation with Stability of Proteins in the Presence of Salts

Partial molar volumes for a homologous series of amino acids and peptides have been measured in aqueous 1M sodium acetate, sodium thiocyanate, and sodium sulfate at 25^°C. These data have been utilized in conjunction with the data in water to deduce partial molar volumes of transfer V _2,m ⁰(tr) from water to these aqueous salt solutions. The volumes of transfer for the amino acids and peptides are found to be positive. The interpretation is that this result arises from the dominant interaction of the sodium salts with the charged centers of amino acids and peptides. Thermal denaturation of the structurally homologous proteins lysozyme and -lactalbumin has been studied in the presence of these salts. Significant thermal stabilization of hen egg-white lysozyme has been observed in the presence of sodium acetate and sodium sulfate. However, the thermal stabilization observed for -lactalbumin is very small in the presence of these salts and sodium thiocyanate leads to a lowering of its thermal denaturation temperature. The rise in the surface tension of aqueous salt solutions with salt concentration has been correlated with the calorimetric and volumetric measurements. The results show that V _2,m ⁰(tr) depends less on the type of electrolyte than on the ionic strength of the solution. The V _2,m ⁰(tr) values correlate very well with the increase in the surface tension of aqueous salt solutions, indicating significant role of surface tension in interactions of amino acids, peptides, or protein with the salts.     

γ-Oxo Carboxylic Acids in Heterocyclic Synthesis IV. Synthesis of Some Pyridazines Containing Phthalyl and Tosyl Amino Acids Using Dcc as the Condensing Agent

The 3(2H)-oxo-, 3(2H)-thioxo- or 3-amino-pyridazine derivatives 4, 6 and 7 were coupled with N-phthalyl- or N-tosyl-amino acids in one-step using N,N′-dicyclohexyl-carbodiimide as the condensing agent to furnish the corresponding 3-(N-phthalyl- or N-tosyl-aminoacyl)pyridazine derivatives 8–10 respectively. Hydrazinolysis of the N-phthalyl derivatives in methanol yielded the corresponding unprotected derivatives 11–13. The antibacterial activities of the prepared compounds were tested.

     

Effect of Chemical Modification of the Tetrapyrrole Macrocycle Structure on the Spectral,Acid–Base,and Complexing Properties of tert-Butyl-Substituted Porphyrazines

Russian Journal of Organic Chemistry - The effect of chemical modification of the tetrapyrrole macrocycle structure on the spectral, acid–base, and complexing properties of...     

Effect of Different Salts on the Solubilities of Benzene and Diphenyl in t—Butyl Alcohol—Water Mixture and Hydrophobic Interaction

The solubilities of benzene and diphenyl in mixed solvents of t-butyl alcohol (TBA) and water with different salts have been determined at T=298.15,303.15,308.15 and 313.15K.The molar fraction of TBA [x(TBA)] in mixed solvent is 0.045,and the molality of the salts (ms) in mixed solvents are 0.000,0.250,0.500,0.750 and 1.000mol/kg ,respectively.The standard Gibbs energies of solution of benzene and diphenyl in the mixed solvents have also been calculated based on the solubility data.The effects of different salts on the hydrophobic interaction (HI) for benzene-benzene pair in the systems were discussed.     

The Effect of a Covalent and a Noncovalent Small-Molecule Inhibitor on the Structure of Abg β-Glucosidase in the Gas-Phase

The effects of binding two small-molecule inhibitors to Agrobacterium sp. strain ATCC 21400 (Abg) β-glucosidase on the conformations and stability of gas-phase ions of Abg have been investigated. Biotin-iminosugar conjugate (BIC) binds noncovalently to Abg while 2,4-dinitro-2-deoxy-2-fluoro-β-d-glucopyranoside (2FG-DNP) binds covalently with loss of DNP. In solution, Abg is a dimer. Mass spectra show predominantly dimer ions, provided care is taken to avoid dissociation of dimers in solution and dimer ions in the ion sampling interface. When excess inhibitor, either covalent or noncovalent, is added to solutions of Abg, mass spectra show peaks almost entirely from 2:2 inhibitor-enzyme dimer complexes. Tandem mass spectrometry experiments show similar dissociation channels for the apo-enzyme and 2FG-enzyme dimers. The +21 dimer produces +10 and +11 monomers. The internal energy required to dissociate the +21 2FG-enzyme to its monomers (767?±?30 eV) is about 36 eV higher than that for the apo-enzyme dimer (731?±?6 eV), reflecting the stabilization of the free enzyme dimer by the 2FG inhibitor. The primary dissociation channels for the noncovalent BIC-enzyme dimer are loss of neutral and charged BIC. The internal energy required to induce loss of BIC is 482?±?8 eV, considerably less than that required to dissociate the dimers. For a given charge state, ions of the covalent and noncovalent complexes have about 15 % and 25 % lower cross sections, respectively, compared with the apo-enzyme. Thus, binding the inhibitors causes the gas-phase protein to adopt more compact conformations. Noncovalent binding surprisingly produces the greatest change in protein ion conformation, despite the weaker inhibitor binding.

The Effect of Arg on the Structure Perturbation and Chaperone Activity of α-Crystallin in the Presence of the Crowding Agent,Dextran

α-Crystallin is a protein that is expressed at high levels in all vertebrate eye lenses. It has a molecular weight of 20 kDa and is composed of two subunits: αA and αB. α-Crystallin is a member of the small heat shock protein (sHsps) family that has been shown to prevent protein aggregation. Small molecules are organic compounds that have low molecular weight (<800 Da). Arginin (Arg) is a small molecule and has been shown to prevent protein aggregation through interaction with partially folded intermediates. In this study, the effect of Arg on the chaperone activity of α-crystallin in the presence of dextran, as a crowding agent, against ordered and disordered aggregation of different target proteins (α-lactalbumin, ovotransferrin, and catalase) has been investigated. The experiments were done using visible absorption spectroscopy, ThT-binding assay, fluorescence spectroscopy, and CD spectroscopy. The results showed that in amorphous aggregation and amyloid fibril formation, both in the presence and absence of dextran, Arg had a positive effect on the chaperone action of α-crystallin. However, in the presence of dextran, the effect of Arg on the chaperone ability of α-crystallin was less than in its absence. Thus, our result suggests that crowding interior media decreases the positive effect of Arg on the chaperone ability of α-crystallin. This is a very important issue, since we are trying to find a mechanism to protect living cells against the toxic effect of protein aggregation.     

Effect of Amino‐Acid‐Based Polar Oils on the Krafft Temperature and Solubilization in Ionic and Nonionic Surfactant Solutions

Abstract

The Krafft temperature and solubilization power of ionic and nonionic surfactants in aqueous solutions are strongly affected by added polar oils such as amino‐acid‐based oils (e.g., N‐acylamino acid esters, AAE), because they tend to be solubilized in the surfactant palisade layer. The Krafft temperatures of 5 wt.% sodium dodecyl sulfate (SDS)‐water and octaoxyethylene octadecyl ether (C₁₈EO₈)‐water systems largely decreases upon addition of AAE and 1‐hexanol, whereas it decreases very slightly in isopropyl myristate (IPM) and n‐dodecane. The lowering of the Krafft temperature can be explained by the same mechanism as the melting‐temperature reduction of mixing two ordinary substances. Namely, the polar oils are solubilized in the surfactant palisade layer of micelles and reduce the melting temperature of hydrated solid‐surfactant (Krafft temperature). On the other hand, non‐polar oil such as dodecane is solubilized deep inside micelles and makes an oil pool. The solubilization of non‐polar oil is enhanced by mixing surfactant with AAE due to an increase in micellar size.     

Effect of the Structure and Size Factor on the Catalytic Properties of Cobalt–Zirconium Oxide Nanoparticles in Deep Oxidation of Methane

We have used X-ray phase analysis, transmission electron microscopy, and temperature-programmed reduction to study cobalt–zirconium catalysts. The most active samples are characterized by higher dispersity of both the support (L = 12-13 nm) and the active component (L 3 nm); modification of the zirconium dioxide with yttrium oxide increases the thermal stability of the catalysts. We have shown that the activity of the catalysts is determined by both the strength of oxygen–catalyst binding and the acidic properties of the catalyst surface.     

Based on the Second Virial Coefficient (A2) to Study Effect of the Synergistic Action of Solvent and External Electric Field on the Solution Behavior and Film’s Condensed State Structure

Chinese Journal of Polymer Science - The solventnatures are crucial to deeply reveal solution behavior of macromolecular chains, physical essence of condensed state structures formation of the film...     

Effect of Alcohols on the CMC and Thermodynamic Functions of Anionic Surfactants in DMF/Long‐Chain Alcohol Using Microcalorimetric Method

The critical micelle concentration (CMC) of two kinds of anionic surfactant (including sodium laurate (SLA) and sodium dodecyl sulfate (SDS)) in mixed alcohol and N, N‐dimethyl formamide solvent (DMF) were investigated through measuring power‐time curves by titration microcalorimetry. From data of the lowest point and the area of the power‐time curves, their CMC and ΔH _m ⁰ can be obtained. According to standard thermodynamic equations, ΔG _m ⁰ and ΔS _m ⁰ also can be calculated. For different surfactant, the influences of the carbon number and the concentration of alcohol on the CMC and standard thermodynamic functions are different in DMF polar medium. These thermodynamic functions for micelle formation can be further interpreted.     

Solvent Effect on Deprotonation Equilibria of Acids of Various Charge Types in Non-aqueous Isodielectric Mixtures of Protic Ethylene Glycol and Dipolar Aprotic N,N-Dimethylformamide at 298.15 K

Deprotonation constants of phthalic (H₂A) and biphthalic (HA⁻) acids and of mono-protonated (BH⁺) and di-protonated (BH₂²⁺) piperazine acids have been determined at 25 °C by measuring the Emf of galvanic cells comprising H⁺-sensitive glass GE(H⁺) and Ag,AgCl electrodes in non-aqueous isodielectric mixtures of protic ethylene glycol (EG) and dipolar aprotic N,N-dimethylformamide (DMF). Solvent effects on deprotonation of the acids: ∂(ΔG _diss^o)=2.303RT[p(_s K _a)−p(_R K _a)], have been dissected into transfer Gibbs energies, ΔG _t^o _, of the species involved by evaluating ΔG _t^o of the uncharged phthalic acid and base piperazine (B) from the measured solubilities of the acid and base, respectively, and using ΔG _t^o of H⁺ based on the TATB reference electrolyte assumptions, as evaluated earlier. The contributions of the different species involved in the protolytic equilibria i.e., H⁺,H₂A,HA⁻,BH₂²⁺ and BH⁺ and their respective conjugate bases HA⁻,A²⁻,BH⁺ and B have been discussed in terms of their solvation behavior as guided by the ‘acid-base’, dispersion, structural and electronic characteristics of the acid-base species and of the co-solvent molecules and binary mixtures, ignoring the Born-type electrostatic interactions on the ionic species as the solvent system is quasi isodielectric.     

Effect of Silica Gel ‘G’ on the Ion Exchange Behaviour of Antimonic Acid Thin Layers in The Chromatographic Study of Anions in Some Aqueous Organic Acid Systems: Determination of Ferricyanide and Dichromate Ions

Abstract

The ion exchange potential of antimonic acid and silica gel ‘G’ has been explored in thin layer chromatographic studies for the separation of anions. Several important and difficult binary separations of anions have been achieved as a result of these studies. Io^? ₃-Bro^? ₃, I^?-Io^? ₃, Io^? ₄-Io^? ₃, Io^? ₄-Po^?- ₄, Br^?-Bro^? ₃, Aso^?- ₄-Cro^?- ₄, S₂o^?- ₃-Po^?- ₄, CNS^?-S₂o^?- ₃, Io^? ₄-Cro^?- ₄, Bro^? ₃-Cro^?- ₄, Io^? ₃-Cr₂o^?- ₇ and s₂o₃-Cro^?- ₄ etc. are separations of analytical interest. Besides, a rapid microgram determination of [Fe(CN)₆]^3? (1–10 μg) and Cr₂o^2- ₇ (2–10 μg) ions have been made.     

Studies on the Structure, Properties of Ferroaluminophosphate Molecular Sieve (FAPO-5) and Chemical State of Iron in the FAPO-5 Molecular Sieve

The pure Ferroaluminophosphate molecular sieve(FAPO-5) was synthesized by hydrothermal crystallization. The crystal structure of FAPO-5 was studied via XRD, electron probe energy dispersion analysis, Mossbauer spectroscopy, EPR, XPS and IR, the parameters of unit cell and chemical composition of FAPO-5 were determined. The result has that the structure of FAPO-5 is AlPO -5 type and Fe2+ Fe3+ are incorporated into the framework of FAPO-5 molecular sieve. In addition, the chemical state of iron in FAPO-5 molecular sieve were studied and the adsorption properties, surface acidity and thermal stability were also investigated.     

The Effects of Salts and Ionic Surfactants on the Micellar Structure of Tri‐Block Copolymer PEO‐PPO‐PEO in Aqueous Solution

The micelles of two poly(ethylene oxide)‐poly(propylene oxide)‐poly(ethylene oxide) (PEO‐PPO‐PEO) block copolymers, P123 and F127 (same mol wt of PPO but different % PEO) in aqueous solution in the absence and presence of salts as well as ionic surfactants were mainly examined by dynamic light scattering (DLS). The study is further supported by cloud point and viscosity measurements. The change in cloud point (CP), as well as the size of micelles in aqueous solution in presence of salts obeys the Hofmeister lyotropic series. Addition of both cationic cetylpyridinium chloride (CPC) and anionic sodium dodecylsulfate (SDS) surfactants in the aqueous solution of P123 show initial decrease of micellar size from 20 nm to nearly 7 nm and then increasing with a double relaxation mode, further in the presence of NaCl this double relaxation mode vanishes. The effect of surfactant on F127, which has much bigger hydrophilic part is different than P123 and have no double relaxation. The relaxation time distributions is obtained using the Laplace inversion routine REPES. Two relaxation modes for P123 are explained on the bases of Pluronic rich mixed micelles containing ionic surfactants and the other smaller, predominantly surfactant rich micelles domains.