Molecular‐Complex Formation of Syndiotactic Polystyrene with Stable Radical Molecules

Summary: The formation of a molecular‐complex crystalline phase of syndiotactic polystyrene (sPS) that contains a stable nitroxide radical compound, 2,2,6,6‐tetramethylpiperidinyl‐N‐oxyl (TEMPO), is confirmed by IR and electron spin resonance (ESR) spectroscopy, X‐ray diffractometry, and thermogravimetric analysis. Through a guest exchange procedure assisted by a plasticizing agent, the original guest (chloroform) contained in the starting clathrate phase is completely replaced by TEMPO. Although the conformational regularity of the sPS helices in the resultant crystalline phase that contains TEMPO is similar to that in the starting clathrate phase, the host lattice expands in the 010 direction. The guest TEMPO molecules exhibit a significantly broadened ESR signal because of their highly concentrated state in the complex crystalline phase.

Thermogravimetric measurement of a powder sample of the sPS/TEMPO complex.     

Clathrate and inclusion compounds. Part 8 [1]. An investigation of the usefulness of the spectral substraction technique in analysing the infrared spectra of clathrates

An investigation has been carried out into the usefulness of the spectral subtraction technique in analyzing the infrared spectra of the clathrates of quinol and of Dianin's compound. Due to the flexibility of the quinol host lattice, it is not advisable to use guest-free -quinol as the reference if the host lattice in the clathrate is considerably distorted, as it is in the CH₃CN clathrate. In this case it is advisable to use another clathrate as the reference provided that the spectrum of the new reference does not contain guest bands in the region of interest. The Dianin's compound host lattice is less flexible than that of quinol, and guest-free Dianin's compound can be used as the reference irrespective of the size of the guest molecule. With both clathrates the spectral subtraction technique has revealed guest molecule bands which were previously obscured by host lattice bands.Dedicated to Professor H. M. Powell.     

Effect of Guest–Host Hydrogen Bonding on the Structures and Properties of Clathrate Hydrates

To provide improved understanding of guest–host interactions in clathrate hydrates, we present some correlations between guest chemical structures and observations on the corresponding hydrate properties. From these correlations it is clear that directional interactions such as hydrogen bonding between guest and host are likely, although these have been ignored to greater or lesser degrees because there has been no direct structural evidence for such interactions. For the first time, single‐crystal X‐ray crystallography has been used to detect guest–host hydrogen bonding in structure II (sII) and structure H (sH) clathrate hydrates. The clathrates studied are the tert‐butylamine (tBA) sII clathrate with H₂S/Xe help gases and the pinacolone + H₂S binary sH clathrate. X‐ray structural analysis shows that the tBA nitrogen atom lies at a distance of 2.64 Å from the closest clathrate hydrate water oxygen atom, whereas the pinacolone oxygen atom is determined to lie at a distance of 2.96 Å from the closest water oxygen atom. These distances are compatible with guest–water hydrogen bonding. Results of molecular dynamics simulations on these systems are consistent with the X‐ray crystallographic observations. The tBA guest shows long‐lived guest–host hydrogen bonding with the nitrogen atom tethered to a water HO group that rotates towards the cage center to face the guest nitrogen atom. Pinacolone forms thermally activated guest–host hydrogen bonds with the lattice water molecules; these have been studied for temperatures in the range of 100–250 K. Guest–host hydrogen bonding leads to the formation of Bjerrum L‐defects in the clathrate water lattice between two adjacent water molecules, and these are implicated in the stabilities of the hydrate lattices, the water dynamics, and the dielectric properties. The reported stable hydrogen‐bonded guest–host structures also tend to blur the longstanding distinction between true clathrates and semiclathrates.     

Complexation of Syndiotactic Polystyrene with 12‐Crown‐4

Solid‐state complexation of syndiotactic polystyrene (sPS) with a crown ether compound, 1,4,7,10‐tetraoxa‐cyclododecane (12‐crown‐4), took place when a film of sPS/chloroform clathrate was subjected to a guest exchange procedure assisted with a plasticizing agent. The new guest 12‐crown‐4 molecules were incorporated into the crystalline region of the sPS film, without causing a large conformational change of host sPS helices. X‐ray diffraction and thermogravimetric investigations showed that sPS/12‐crown‐4 complex had a clathrate complex structure which contained four 12‐crown‐4 molecules per unit cell. IR and Raman data suggested that 12‐crown‐4 took a C_i‐type conformation in the sPS complex phase.

     

Crystal structure of the Hofmann-dma type clathrate

Seven new Hofmann-dma type clathrates Cd(dma)₂Ni(CN)₄-xG (x = 1, G = aniline, 2,3-xylidine, 2,4-xylidine, 2,5-xylidine, 2,6-xylidine, 3,5-xylidine and x = 2, G = 2,4,6-trim ethylaniline) were prepared by replacing the amine in a Hofmann type clathrate Cd(NH₃)₂Ni(CN)₄-2G by dimethylamine (dma). The structure of the Hofmann-dma type clathrate is formed with stacked host two-dimensional metal complexes of Cd(dma)₂ Ni(CN)₄ and guest molecules accommodated in the space between the stacked host complexes. This basic structure scheme is the same as that of the Hofmann type clathrate. However, the guest species accommodated in the Hofmann-dma type clathrate are more various than those of the Hofmann type clathrate, and their crystal structures are classified into four types depending on the geometry of the guest species. In order to clarify the structure of the Hofmann-dma type clathrate, single crystal X-ray diffraction experiments were canied out on the seven new clathrates, and the crystal structures of the o-, m- and p- toluidine clathrates were refined. The X-ray structure analyses showed that the host two-dimensional metal complex of the Hofmann-dma tvpe clathrate has stmctural flexibility to form a puckered structure, which results from the angular distortion of the bond between Cd and N of the cyanide bridge in the host two-dimensional complex. This stmctural flexibility of the host complex leads to the diversity of crystal structures and guest species in Hofmann-dma type clathrates. Translated fromZhurnal Strukturnmoi Khimii, Vol. 40, No. 5, pp. 898–926, September–October, 1999.     

Structure–Properties Relations in Werner β-[Ni(NCS)2(4-MePy)4] Clathrates. Part 2. Host–Host Interactions as a Function of the Guest Molecular Size and Shape and the Amount of Absorbed Guest Compound

Careful analysis of changes in the geometry of the host lattice structure on inclusion of different guest molecules was performed for 11 -[Ni(NCS)₂(4-methylpyridine)₄] clathrates reported in the literature, and specific features were established for the geometry of the host crystal lattice structure, which are characteristic for different modes of location of the guest molecules. A new method is suggested for the analysis of the volume and shape of the empty space in clathrates. Experimental data are reported on the dependence of the a and c parameters of the unit cell of clathrate phases (with furan and dichloromethane as guest components) from the guest uptake. Consideration of these data permit us to construct a model of the changes of host–host interactions in the -[Ni(NCS)₂(4-methylpyridine)₄] clathrates with change of guest uptakes. Modeling of the process of diffusion of the guest molecule through the channel of the -[Ni(NCS)₂(4-methylpyridine)₄] clathrate allowed the nature of the rate-determining step of diffusion to be established. Part 1 of this series has been published as [3].     

Clathrate thermodynamics for the unstable host framework

We have introduced the concept of clathrates whose empty host framework is unstable. In contrast to the Van der Waals theory, according to which the empty host framework is metastable, we believe it to become metastable when, in the cellular clathrates, certain type of cavities are fully occupied or, in the channel clathrates, the guest molecules are closely packed. The free energy of the channel and cellular types of clathrates has been determined using statistical thermodynamics methods. The obtained chemical potentials allowed us to describe the equilibrium of the clathrate with the stable host -phase and the gaseous guest phase. For the cellular clathrates the equations have been obtained determining the dependence of the degree of filling of small cavities upon temperature and the gaseous phase pressure. In the case of the channel clathrates the set of equations on the composition and parameter of the orientational ordering is found. These equations enable us to describe quantitatively compressed state of the guest molecules in the channel and to find temperatures of orientational ordering.     

Structure and properties of the δ‐form and mesophase of syndiotactic polystyrene membranes prepared from different organic solvents

Syndiotactic polystyrene (sPS) membranes were prepared with different organic solvent systems and compared to get the information about the δ‐form complexing behavior of sPS. Further, the guest molecules included in the clathrate δ form of sPS are removed by stepwise extraction method. The conformational changes during the TTGG helical formation of sPS/organic solvent systems have been identified by FTIR spectroscopy, and it was concluded that the TTGG helices were constructed in regular sequences, which depends on the nature of the respective solvents. The TTGG content in the mesophase is found to be increased by removing the guest molecules. The structural changes of sPS/organic solvent systems have been characterized by WAXD analysis. Moreover, the different clathrate structures were found and showed the different crystalline reflections in the WAXD profiles, which are significantly changed with the kind of guest solvent included in sPS. The content of solvents in the clathrated sPS and the desorption temperatures were determined by thermal analysis. The resulted mesophase of sPS membrane contains the nanoporous molecular cavities that depend on the size of the guest molecule. © 2005 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 43: 1873–1880, 2005     

Probing structural transition and guest dynamics of hydroquinone clathrates by temperature-dependent terahertz time-domain spectroscopy

The structural transition from hydroquinone clathrates to crystalline α-form hydroquinone was observed up to the range of 3 THz frequency as a function of temperatures. We found that all three hydroquinone clathrates, CO(2)-, CH(4)-, and CO(2)/CH(4)-loaded hydroquinone clathrates, transform into the α-form hydroquinone at around 102 ± 7 °C. The resonance peak of the CO(2)-loaded hydroquinone clathrate at 2.15 THz decreases with increasing temperature, indicating that CO(2) guest molecules are readily released from the host framework prior to the structural transformation. This reveals that the hydroquinone clathrates may transform into the stable α-form hydroquinone via the metastable form of guest-free clathrate, which depends on guest molecules enclathrated in the cages of the host frameworks. A strong resonance of the α-form hydroquinone at 1.18 THz gradually shifts to the low frequency with increasing temperature and shifts back to the high frequency with decreasing temperature.     

Far-infrared spectra of some β-hydroquinone clathrates

Far-infrared spectra (400-30 cm^?1) of Nujol mulls of the β-hydroquinone clathrates containing the following guest molecules were investigated: formic acid, formic acid-d₂, methanol, methanol-d₄, acetonitrile, acetonitrile-d₃, sulphur dioxide and also both of methanol and sulphur dioxide. The observed infrared bands of the mulls in the region of 4000-30 cm^?1 were classified into those due to the host lattice and those due to the guest molecules. On the basis of the comparison of the spectra, some bands were assigned to the translational or the rotational vibrations of guest molecules. Appearance of those bands suggested that some guest molecules are considerably bound in the cavities of the host lattice. Effect of temperature change on the bands was also measured.     

Inclusion Compounds of Bulky Binaphthyl-type Bis-fluorenol Hosts

Inclusion properties of a new family of clathrate hosts (1–4) containing two 9-hydroxy-9-fluorenyl units or chloro-, bromo- and t-butyl-substituted derivatives of this group attached in the 3,3′-position to a basic 2,2′-binaphthyl construction element are reported (115 examples of clathrates). The crystal structures of six selected clathrates, involving dimethylsulfoxide, cyclopentanol, diethylether, benzylamine, chloroform and acetone as the guest, have been determined by X-ray diffraction, showing varied modes of supramolecular interaction dependent on the host and guest constitutions, while the formation of an intramolecular hydrogen bond between the hydroxy groups of the fluorenol units is a common structural feature (except in 3a) controlling twisted conformation of the host molecules.     

On the clathrate structures of syndiotactic poly(m-methylstyrene)

The crystal structures of clathrate forms of syndiotactic poly(m-methylstyrene) containing guest molecules having different steric hindrance (CS₂, benzene and orto-dichlorobenzene) are presented. The structures are all characterized by polymer chains in s (2/1)2 helical conformation and guest molecules packed in an orthorhombic unit cell according to the space group Pcaa. All the presented clathrates belongs to β class indipendently from the dimensions of the guest molecule. In this aspect they differ both from clathrate forms of syndiotactic polystyrene, all belonging to α class, and from clathrate forms of syndiotactic poly(p-methylstyrene) that belong to α or β class according to the steric hindrance of the guest molecule.     

Semiconducting Clathrates Meet Gas Hydrates: Xe24[Sn136]

Semiconducting Group 14 clathrates are inorganic host–guest materials with a close structural relationship to gas hydrates. Here we utilize this inherent structural relationship to derive a new class of porous semiconductor materials: noble gas filled Group 14 clathrates (Ng_x[M₁₃₆], Ng=Ar, Kr, Xe and M=Si, Ge, Sn). We have carried out high‐level quantum chemical studies using periodic Local‐MP2 (LMP2) and dispersion‐corrected density functional methods (DFT‐B3LYP‐D3) to properly describe the dispersive host–guest interactions. The adsorption of noble gas atoms within clathrate‐II framework turned out to be energetically clearly favorable for several host–guest systems. For the energetically most favorable noble gas filled clathrate, Xe₂₄[Sn₁₃₆], the adsorption energy is ?52 kJ mol^?1 per guest atom at the LMP2/TZVPP level of theory, corresponding to ?9.2 kJ mol^?1 per framework Sn atom. Considering that a hypothetical guest‐free Sn clathrate‐II host framework is only 2.6 kJ mol^?1 per Sn atom less stable than diamond‐like α‐Sn, the stabilization resulting from the noble gas adsorption is very significant.     

Crystal structures and spectroscopic properties of polycyano-polycadmate host clathrates including a CT complex guest of methylviologen dication and aromatic donor

A series of polycyano-polycadmate (PCPC) host clathrates including a CT complex of methylviologen dication (MV2+) and an aromatic donor as a guest were synthesized, and their crystal structures and spectroscopic properties were investigated. The PCPC host has a framework structure built with Cd2+ ions as coordination centres and cyanides as bridging ligands. This framework host has negative charge and includes a cationic guest together with an ordinary neutral guest. MV2+, which is a strong acceptor, was included as a cationic guest and an aromatic compound, which works as a donor, was included as a neutral guest. Crystal structures of seven clathrates, whose neutral guests were o-cresol, m-cresol, p-cresol, 1-methylnaphthalene, 1,2,4-trimethoxybenzene, pyrrole and aniline, were determined by single crystal X-ray diffraction methods. In all cases MV2+ and the neutral guest formed a CT complex with a face to face stacking structure and were included as a CT complex guest. However, depending on each clathrate the ratio of aromatic donor to MV2+ was different and several variations were found in their PCPC host structures. The clathrates had their own colour depending on their neutral guest. The plot of the CT transition energies estimated from optical CT bands against the ionization potentials of the neutral guests satisfied a linear relationship predicted by Mulliken theory. However, the CT transition energies observed in the clathrates showed a shift to lower energy by ca. 0.6 eV compared with those observed in corresponding acetonitrile solutions.     

Stoichiometry of clathrates

Two aspects of clathrate stoichiometry are discussed: structural stoichiometry and variation in composition due to variable occupation of host cavities in the framework by guest molecules. The solid solutions that are due to the variable occupation of cavities (iskhoric solutions) are classified into two types according to the stability of the hollow clathrate framework of the host. The first type involves compounds with stable hollow frameworks (the occupancies change from zero), and the second type are compounds with metastable hollow frameworks (the occupancies change from certain positive values). Special attention is paid to a wide class of clathrate compounds of constant composition (currently all clathrates are regarded as nonstoichiometric compounds). Clathrates of constant composition are formed when the hollow framework of the host is absolutely unstable. Reasons for instability of the frameworks are discussed, and theoretical models designed on the basis of the available data are considered. Examples of alloxenic (with one guest replaced by another) and allokiric (with replacements in the host subsystem) solid clathrate solutions are given. Institute of Inorganic Chemistry, Siberian Branch, Russian Academy of Sciences. Translated fromZhurnal Struktumoi Khimii, Vol. 36, No. 6, pp. 1088–1141, November–December, 1995. Translated by L. Smolina     

Formation and spectra of clathrate hydrates of methanol and methanol-ether mixtures

Infrared spectra of mixed clathrate hydrates, with either ethylene oxide (EO) or tetrahydrofuran (THF) and methanol molecules as the guest species, have been obtained from thin films prepared by vapor deposition of D₂O mixtures in the 115–130 K range. Although methanol acts as a suppressant to the direct vapor deposition of a type I clathrate with EO, nearly complete conversion of 115 K amorphous codeposits, to the crystalline mixed clathrate, occurs upon warming near 150 K. By contrast, the type II clathrate of THF shows an increased crystalline quality when methanol is included in the vapor deposits of the mixed clathrate hydrate at 130 K. The observation of the O---D stretch-mode band of weakly bonded CD₃OD near 2575 cm⁻¹ is part of the evidence that the methanol molecules are encaged. However, as shown theoretically by Tanaka, the clathrate hydrates of methanol, even when mixed with an ether help gas, are not stable structures but form at low temperatures because of kinetic factors, only to decompose in the 140–160 K range. Attempts to prepare a simple type I or type II clathrate hydrate of methanol have produced mixed results. Limited amounts of clathrate hydrate form during deposition but annealing does not result in complete conversion to crystalline clathrates, particularly for host : guest ratios of 17 : 1.     

CS-II binary clathrate hydrates at pressures of up to 15 kbar

The pressure dependence of the decomposition temperatures of binary clathrate hydrates of tetra-hydrofuran with xenon and methane as well as of chloroform and carbon tetrachloride clathrates with xenon has been studied. The absence of phase transitions at pressures from 1 to 15,000 bar indicates that the structure of all the hydrates remains constant (CS-II). The decomposition temperatures of the binary hydrates of tetrahydrofuran and carbon tetrachloride with xenon at 15 kbar (above 124ℴC) are exceedingly high for polyhedral clathrate hydrates because the guest molecules are highly complementary to the cavities of the clathrate lattice. The paper also considers the packing density effect in the crystal structure of hydrates on the behavior of the latter at elevated pressure. Translated fromZhurnal Strukturnoi Khimii, Vol. 41, No. 3, pp. 582-589, May–June, 2000.     

Molecular Dynamics Simulation of Structure II Clathrate Hydrates of Xenon and Large Hydrocarbon Guest Molecules

Molecular dynamics (MD) simulations of structure II clathrate hydrates are performed under canonical (NVT) and isobaric–isothermal (NPT) ensembles. The guest molecule as a small help gas is xenon and gases such as cyclopropane, isobutane and propane are used as large hydrocarbon guest molecule (LHGM). The dynamics of structure II clathrate hydrate is considered in two cases: empty small cages and small cages containing xenon. Therefore, the MD results for structure II clathrate hydrates of LHGM and LHGM + Xe are obtained to clarify the effects of guest molecules on host lattice structure. To understand the characteristic configurations of structure II clathrate hydrate the radial distribution functions (RDFs) are calculated for the studied hydrate system. The obtained results indicate the significance of interactions of the guest molecules on stabilizing the hydrate host lattice and these results is consistent with most previous experimental and theoretical investigations.