Metallosupramolecular Complexes Derived from Bis(benzene‐o‐dithiol) Ligands

Meso complex versus helicate : A naphthalene‐bridged bis(benzene‐o‐dithiol) ligand reacts with Ti⁴⁺ to give both dinuclear triple‐stranded meso complexes and helicates, depending on the counterion employed during synthesis. DFT calculations performed with a simplified complex revealed that the interconversion of Λ to its Δ enantiomer proceeds via a C_3h‐symmetric transition state (see figure).

     

Syntheses,Characterization, and DNA Binding Studies of a Series of Copper(II), Nickel(II), Platinum(II) and Zinc(II) Complexes Derived from Schiff Base Ligands

Three series of metal salophen complexes derived from Zn²⁺, Cu²⁺, Pt²⁺ and Ni²⁺ have been synthesized and their interaction with quadruplex DNA has been evaluated. The compounds differ on the number of ethyl piperidine substituents. They have been characterized by ¹H NMR, IR and UV-visible spectroscopies and by HR-mass spectrometry. Their luminescent properties have been also evaluated and we can observe that, as expected, Zn²⁺ and Pt²⁺ complexes are those displaying more interesting luminescence with an emission band red-shifted with respect to the corresponding uncoordinated ligand. DNA interactions with G4 and duplex DNA were evaluated by FRET melting assays (for the Zn²⁺, Cu²⁺ and Ni²⁺ complexes) and by emission titrations (for one Pt²⁺ complex) which indicated that the disubstituted compounds 2-Ni and 2-Pt are the only ones that display good affinity for G4 DNA structures.     

Structural Flexibility of Metal Chelate Complexes and Its Relation to Supramolecular Chemistry

Crystal structures of metal chelate and related complexes in the Cambridge Structural Database have been analyzed, with respect to their use as components in supramolecular metal-organic compounds. In β-diketonate complexes, the distribution of angles between ligands is relatively broad; other ligands, such as 2,2′-bipyridine, yield significantly narrower distributions. According to the principle of structure correlation, these distributions reflect the ease of distorting the various families of complexes. A comparison through density functional theory calculations also indicates that angular distortions require significantly less energy for M(β-diketonate)₃ than for M(2,2′-bipyridine)₃. The differences are likely to affect the construction of supramolecular systems from different combinations of metals and ligands, including the likelihood that the desired structures will be obtained.     

Flexidentate Coordination Behavior and Chemical Non-Innocence of a Bis(1,3-Diphosphacyclobutadiene) Sandwich Anion

The homoleptic 1,3-diphosphacyclobutadiene sandwich complex [Co(η⁴-1,3-P₂C₂tBu₂)₂]⁻ behaved as a versatile and highly flexible metalloligand toward Ni²⁺, Ru²⁺, Rh⁺, and Pd²⁺ cations, forming a range of unusual oligonuclear compounds. The reaction of [K(thf)₂{Co(η⁴-1,3-P₂C₂tBu₂)₂}] with [Ni₂Cp₃]BF₄ initially afforded the σ-complex [CpNi{Co(η⁴-1,3-P₂C₂tBu₂)₂}(thf)] ( 2 ), which converted into [Co(η⁴-CpNi{1,3-P₂C₂tBu₂-κP,κC})(η⁴-1,3-P₂C₂tBu₂)] ( 3 ) below room temperature. The structure of 3 contains an unprecedented 1,4-diphospha-2-nickelacyclopentadiene moiety formed by an oxidative addition of a ligand P−C bond onto nickel. At elevated temperatures, 3 isomerized to [Co(η⁴-CpNi{1,4-P₂C₂tBu₂-κ²P,P})(η⁴-1,3-P₂C₂tBu₂)] ( 4 ), which features a 1,3-diphospha-2-nickelacyclopentadiene unit. Transmetalation of [K(thf)₂{Co(η⁴-1,3-P₂C₂tBu₂)₂}] with [Cp*RuCl]₄ (Cp*=C₅Me₅) afforded tetranuclear [(Cp*Ru)₃(μ-Cl)₂{Co(η⁴-1,3-P₂C₂tBu₂)₂}] ( 5 ), in which the [Co(η⁴-1,3-P₂C₂tBu₂]⁻ anion acts as a chelate ligand toward Ru²⁺. The diphosphido complex [(Cp*Ru)₂(μ,η²-P₂)(μ,η²-C₂tBu₂)] ( 6 ) was formed as a byproduct. Pure compound 6 was isolated after prolonged heating of the reaction mixture. The reaction of [K(thf)₂{Co(η⁴-1,3-P₂C₂R₂)₂}] (R=tBu; adamantyl, Ad) with [RhCl(cod)]₂ (cod=1,5-cyclooctadiene) afforded unprecedented π-complexes [Rh(cod){Co(η⁴-1,3-P₂C₂R₂)₂}] ( 7 : R=tBu; 8 : R=Ad), in which one μ:η⁴:η⁴-P₂C₂R₂ ligand bridges two metal atoms. The pentanuclear complex [Pd₃(PPh₃)₂{Co(η⁴-1,3-P₂C₂tBu₂)₂}₂] ( 10 ), featuring a Pd₃ chain and a rare 1,4-diphospha-2-butene ligand, was synthesized by reacting [K(thf)₂{Co(η⁴-1,3-P₂C₂tBu₂)₂}] with cis-PdCl₂(PPh₃)₂. The redox properties of selected compounds were analyzed by cyclic voltammetry, whereas DFT calculations gave additional insight into the electronic structures. The results of this study revealed several remarkable and previously unrecognized properties of the [Co(P₂C₂tBu₂)₂]⁻ anion.     

Novel Transition‐Metal (M=Cr,Mo, W,Fe) Carbonyl Complexes with Bis(guanidinato)silicon(II) Ligands

The donor‐stabilized silylene 2 (the first bis(guanidinato)silicon(II ) complex) reacts with the transition‐metal carbonyl complexes [M(CO)₆] (M=Cr, Mo, W) to form the respective silylene complexes 7 – 10 . In the reactions with [M(CO)₆] (M=Cr, Mo, W), the bis(guanidinato)silicon(II ) complex 2 behaves totally different compared with the analogous bis(amidinato)silicon(II ) complex 1 , which reacts with [M(CO)₆] as a nucleophile to replace only one of the six carbonyl groups. In contrast, the reaction of 2 leads to the novel spirocyclic compounds 7 – 9 that contain a four‐membered SiN₂C ring and a five‐membered MSiN₂C ring with a M?Si and M?N bond (nucleophilic substitution of two carbonyl groups). Compounds 7 – 10 were characterized by elemental analyses (C, H, N), crystal structure analyses, and NMR spectroscopic studies in the solid state and in solution.     

Multicomponent Assembly of Macrocycles and Polymers by Coordination of Pyridyl Ligands to 1,4‐Bis(benzodioxaborole)benzene

Multicomponent reactions between 1,4‐benzenediboronic acid, catechol, and different pyridyl ligands are reported. The condensation of 1,4‐benzenediboronic acid with catechol gives 1,4‐bis(benzodioxaborole)benzene. Upon crystallization, the ester aggregates with the N‐donor ligands through dative B? N bonds. Depending on the nature of the pyridyl ligand, molecularly defined macrocycles or polymeric structures are obtained. 1D polymers are formed with 4,4‐bipyridine and 1,2‐di(4‐pyridyl)ethylene, whereas a 2D network is obtained with the tetradentate ligand tetra(4‐pyridylphenyl)ethylene. These results highlight the utility of dative B? N bonds in structural supramolecular chemistry and crystal engineering.     

Selective Binding of Open Frameworks Assembled from Nickel(II) Macrocyclic Complexes with Organic and Inorganic Guests

Inclusion studies for metal-organic open-frameworks, [Ni(C_10}H₂₄N₄)(H₂O)₂]₃[BTC]₂·24H₂O (1) and [Ni(C₁₀H₂₆N₆)]₃ [BTC]₂·18H₂O(2) (BTC^3- = 1,3,5-benzenetricarboxylate) with various organic andinorganic guest molecules have been carried out. 1 is the previously reportedmolecular floral lace with 1-D channels, where positively charged macrocyclic layersand negatively charged BTC^3- layers are alternately packed by hydrogen bondinginteractions. 2 is assembled in this study from nickel(II) hexaazamacrocyclic complexcontaining methyl pendant arms and BTC^3-. The X-ray structure of 2 shows thatthe nickel(II) complex and BTC^3- form a 2-D coordination polymer. The XRPD patternsof 2 indicate that framework of 2 is slightly deformed upon removal of waterguest molecules but restored upon rebinding of water. The host solid 1 binds MeOHin toluene, and 1,3,5-trihydroxybenzene (THB) and 4-hydroxyacetophenone (HAP) in EtOH/toluene (v/v = 1/4) solutions. The binding constants (K_f) of 1 forMeOH, THB, and HAP are 66.4 M^-1, 259 M^-1, and 13.9 M^-1,respectively. In the range of high concentration of the guest, however, the host showsvarious binding curves depending upon the types of guest. It binds PhOH in toluene,showing a sigmoid curve. It also binds transition metal complexes such as[Cu(NH₃)₄](ClO₄)₂, [Cu(ethylenediamine)₂](ClO₄)₂,[Cu(histamine)₂](ClO₄)₂, and[Cu(N,N'-bis(3-aminopropyl)ethylenediamine)](ClO₄)₂ in MeCN, with K_f values of 645 M^-1, 9.52 M^-1, 37.2 M^-1, and 6.00 M^-1,respectively. The host solid 2 binds selectively PhOH over PhCl and PhBr, showing that hydrogen bonding interaction between the host and guest plays an important role in the selectivity.     

Advantages of Group 4 Metallocene Bis(trimethylsilyl)acetylene Complexes as Metallocene Sources Towards Other Synthetically used Systems

Active species for synthetic and catalytic applications are formed from well defined complexes or mixtures of compounds. For group 4 metallocenes, three pathways for the formation of the reactive complex fragment [Cp′₂M] are known: (i) reductive mixtures and well defined complexes which are able to form the metallocene fragments either by (ii) addition or (iii) substitution reactions. In this account for each of theses systems (i)–(iii) a prominent example will be discussed in detail, (i) the Negishi reagent Cp₂ZrCl₂/n-BuLi, (ii) bis(η⁵ : η¹-pentafulvene) complexes and (iii) metallocene bis(trimethylsilyl)acetylene complexes, to show the advantages and the disadvantages for each of these methods for synthetic applications. This account summarizes some main advantages of group 4 metallocene bis(trimethylsilyl)acetylene complexes as metallocene generating agents over other synthetically used systems. For each of the special purposes, all described systems have advantages as well as disadvantages. The aim of this overview is to help synthetic chemists in selecting the most effective system on the basis of [Cp′₂M] (M=Ti, Zr) for synthetic or catalytic puposes.     

Template‐Directed Self‐Recognition of Alkyl‐Bridged Bis(catechol) Ligands in the Formation of Helicate‐Type Complexes

A controlling influence on the self‐assembly in the complexation reaction of a mixture of methylene‐ and ethylene‐bridged bis(catechol) ligands ( 1 ‐H₄ and 2 ‐H₄, respectively) with titanium(IV ) ions is exerted by alkali metal cations (see scheme). Thus, not a complicated mixture of complexes, but as a result of a self‐recognition of the ligands only well‐defined products are formed.     

主族金属氨基酸配合物的晶体学研究进展

主族金属配合物的研究是配位化学的重要主题之一. 相对于过渡金属和稀土金属配合物而言, 主族金属配合物的研究比较薄弱, 其主要原因在于: 主族金属的闭壳层电子层结构、有限的价电子数和较少的氧化态等特点, 使得主族金属与有机配体的相互作用较弱, 作用模式较为单一. 但近年来, 随着合成技术与分析检测技术的不断提升, 具有新颖结构并具有与过渡金属配合物相似的优良性能的主族金属配合物也不断地进入了人们的视野. 作为生物体的基本结构单元的氨基酸是一类良好的功能配体, 主族金属氨基酸配合物的研究具有重要的学术价值和应用价值, 也是化学、生物、医药和材料等众多学科领域中的共同的基本问题. 解决基本问题的一个切入点可能是研究这些新型主族金属氨基酸配合物的分子结构与物质结构. 因此, 本工作基于2000年以后发表的主族金属氨基酸配合物的晶体结构, 从X射线晶体学的研究视角, 分析了新型的主族金属氨基酸配合物的结构多样性, 包括当前热门的MOF类的结构; 综述了主族金属氨基酸配合物的研究进展; 展望了未来这一领域的发展方向; 提出了以功能为导向系统地开展主族金属氨基酸的配位化学和超分子化学的研究思路. 谨以此文献给2014年国际晶体学年.     

PtII Coordination to N1 of 9‐Methylguanine: Why it Facilitates Binding of Additional Metal Ions to the Purine Ring

The preparation and X‐ray crystal structure analysis of {trans‐[Pt(MeNH₂)₂(9‐MeG‐N1)₂]} ? {3 K₂[Pt(CN)₄]} ? 6 H₂O ( 3 a ) (with 9‐MeG being the anion of 9‐methylguanine, 9‐MeGH) are reported. The title compound was obtained by treating [Pt(dien)(9‐MeGH‐N7)]²⁺ ( 1 ; dien=diethylenetriamine) with trans‐[Pt(MeNH₂)₂(H₂O)₂]²⁺ at pH 9.6, 60 °C, and subsequent removal of the [(dien)Pt^II] entities by treatment with an excess amount of KCN, which converts the latter to [Pt(CN)₄]^2?. Cocrystallization of K₂[Pt(CN)₄] with trans‐[Pt(MeNH₂)₂(9‐MeG‐N1)₂] is a consequence of the increase in basicity of the guanine ligand following its deprotonation and Pt coordination at N1. This increase in basicity is reflected in the pK_a values of trans‐[Pt(MeNH₂)₂(9‐MeGH‐N1)₂]²⁺ (4.4±0.1 and 3.3±0.4). The crystal structure of 3 a reveals rare (N7,O6 chelate) and unconventional (N2,C2,N3) binding patterns of K⁺ to the guaninato ligands. DFT calculations confirm that K⁺ binding to the sugar edge of guanine for a N1‐platinated guanine anion is a realistic option, thus ruling against a simple packing effect in the solid‐state structure of 3 a . The linkage isomer of 3 a , trans‐[Pt(MeNH₂)₂(9‐MeG‐N7)₂] ( 6 a ) has likewise been isolated, and its acid–base properties determined. Compound 6 a is more basic than 3 a by more than 4 log units. Binding of metal entities to the N7 positions of 9‐MeG in 3 a has been studied in detail for [(NH₃)₃Pt^II], trans‐[(NH₃)₂Pt^II], and [(en)Pd^II] (en=ethylenediamine) by using ¹H NMR spectroscopy. Without exception, binding of the second metal takes place at N7, but formation of a molecular guanine square with trans‐[(Me₂NH₂)Pt^II] cross‐linking N1 positions and trans‐[(NH₃)₂Pt^II] cross‐linking N7 positions could not be confirmed unambiguously, despite the fact that calculations are fully consistent with its existence.     

Chelate‐Thiolate‐Coordinate Ligands Modulating the Configuration and Electrochemical Property of Dinitrosyliron Complexes (DNICs)

As opposed to the reversible redox reaction ({Fe(NO)₂}¹⁰ reduced‐form DNIC [(NO)₂Fe(S(CH₂)₃S)]^2? ( 1 )?{Fe(NO)₂}⁹ oxidized‐form [(NO)₂Fe(S(CH₂)₃S)]^?), the chemical oxidation of the {Fe(NO)₂}¹⁰ DNIC [(NO)₂Fe(S(CH₂)₂S)]^2? ( 2 ) generates the dinuclear {Fe(NO)₂}⁹–{Fe(NO)₂}⁹ complex [(NO)₂Fe(μ‐SC₂H₄S)₂Fe(NO)₂]^2? ( 3 ) bridged by two terminal [SC₂H₄S]^2? ligands. On the basis of the Fe K‐edge pre‐edge energy and S K‐edge XAS, the oxidation of complex 1 yielding [(NO)₂Fe(S(CH₂)₃S)]^? is predominantly a metal‐based oxidation. The smaller S1‐Fe1‐S2 bond angle of 94.1(1)° observed in complex 1 (S1‐Fe1‐S2 88.6(1)° in complex 2 ), compared to the bigger bond angle of 100.9(1)° in the {Fe(NO)₂}⁹ DNIC [(NO)₂Fe(S(CH₂)₃S)]^?, may be ascribed to the electron‐rich {Fe(NO)₂}¹⁰ DNIC preferring a restricted bite angle to alleviate the electronic donation of the chelating thiolate to the electron‐rich {Fe(NO)₂}¹⁰ core. The extended transition state and natural orbitals for chemical valence (ETS‐NOCV) analysis on the edt‐/pdt‐chelated {Fe(NO)₂}⁹ and {Fe(NO)₂}¹⁰ DNICs demonstrates how two key bonding interactions, that is, a Fe?S covalent σ bond and thiolate to the Fe d charge donation, between the chelating thiolate ligand and the {Fe(NO)₂}^9/10 core could be modulated by the backbone lengths of the chelating thiolate ligands to tune the electrochemical redox potential (E_1/2=?1.64 V for complex 1 and E_1/2=?1.33 V for complex 2 ) and to dictate structural rearrangement/chemical transformations (S‐Fe‐S bite angle and monomeric vs. dimeric DNICs).     

Supramolecular Polymers Self‐Assembled from trans‐Bis(pyridine) Dichloropalladium(II) and Platinum(II) Complexes

Two structurally similar trans‐bis(pyridine) dichloropalladium(II)‐ and platinum(II)‐type complexes were synthesized and characterized. They both self‐assemble in n‐hexane to form viscous fluids at lower concentrations, but form metallogels at sufficient concentrations. The viscous solutions were studied by capillary viscosity measurements and UV/Vis absorption spectra monitored during the disassembly process indicated that a metallophilic interaction was involved in the supramolecular polymerization process. For the two supramolecular assemblies, uncommon continuous porous networks were observed by using SEM and TEM revealed that they were built from nanofibers that fused and crosslinked with the increase of concentration. The xerogels of the palladium and platinum complexes were carefully studied by using synchrotron radiation WAXD and EXAFS. The WAXD data show close stacking distances driven by π–π and metal–metal interactions and an evident dimer structure for the platinum complex was found. The coordination bond lengths were extracted from fitting of the EXAFS data. Moreover, close Pt^II–Pt^II (Pd^II–Pd^II) and Pt?Cl (Pd?Cl) interactions proposed from DFT calculations in the reported oligo(phenylene ethynylene) (OPE)‐based palladium(II) pyridyl supramolecular polymers were also confirmed by using EXAFS. The Pt^II–Pt^II interaction is more feasible for supramolecular interaction than the Pd^II–Pd^II interaction in our simple case.     

Supramolecular Paradigm for Capture and Co-Precipitation of Gold(III) Coordination Complexes

A new supramolecular paradigm is presented for reliable capture and co-precipitation of haloauric acids (HAuX₄) from organic solvents or water. Two classes of acyclic organic compounds act as complementary receptors (tectons) by forming two sets of directional non-covalent interactions, (a) hydrogen bonding between amide (or amidinium) NH residues and the electronegative X ligands on the AuX₄⁻, and (b) electrostatic stacking of the electron deficient Au center against the face of an aromatic surface. X-ray diffraction analysis of four co-crystal structures reveals the additional common feature of proton bridged carbonyls as a new and predictable supramolecular design element that creates one-dimensional polymers linked by very short hydrogen bonds (CO⋅⋅⋅OC distance <2.5 Å). Two other co-crystal structures show that the amidinium-π⋅⋅⋅XAu interaction will reliably engage AuX₄⁻ with high directionality. These acyclic compounds are very attractive as co-precipitation agents within new “green” gold recovery processes. They also have high potential as tectons for controlled self-assembly or co-crystal engineering of haloaurate composites. More generally, the supramolecular paradigm will facilitate the design of next-generation receptors or tectons with high affinity for precious metal square planar coordination complexes for use in advanced materials, nanotechnology, or medicine.     

Kinetic and Thermodynamic Stabilization of Metal Complexes by Introverted Coordination in a Calix[6]azacryptand

The Huisgen thermal reaction between an organic azide and an acetylene was employed for the selective monofunctionalization of a X₆‐azacryptand ligand bearing a tren coordinating unit [X₆ stands for calix[6]arene and tren for tris(2‐aminoethyl)amine]. Supramolecular assistance, originating from the formation of a host–guest inclusion complex between the reactants, greatly accelerates the reaction while self‐inhibition affords a remarkable selectivity. The new ligand possesses a single amino‐leg appended at the large rim of the calixarene core and the corresponding Zn²⁺ complex was characterized both in solution and in the solid state. The coordination of Zn²⁺ not only involves the tren cap but also the introverted amino‐leg, which locks the metal ion in the cavity. Compared with the parent ligand deprived of the amino‐leg, the affinity of the new monofunctionalized X₆tren ligand 6 for Zn²⁺ is found to have a 10‐fold increase in DMSO, which is a very competitive solvent, and with an enhancement of at least three orders of magnitude in CDCl₃/CD₃OD (1:1, v/v). In strong contrast with the fast binding kinetics, decoordination of Zn²⁺ as well as transmetallation appeared to be very slow processes. The monofunctionalized X₆tren ligand 6 fully protects the metal ion from the external medium thanks to the combination of a cavity and a closed coordination sphere, leading to greater thermodynamic and kinetic stabilities.