Nucleoside und Nucleotide Teil 27 Festphasensynthese eines Tridecanucleosid-dodecaphosphats,das die unnatürliche Base 4-Amino-2(1H)-pyridinon enthält,und eines Octanucleosid-heptaphosphats zur Untersuchung der DNA-Polymerase-Spezifität

Nucleosides and Nucleotides. Solid Phase Synthesis of a Tridecanucleoside Dodecaphosphate Containing the Unnatural Base 4-Amino-2(1H)-pyridinone and of a Octanucleoside Heptaphosphate for the Determination of the DNA-Polymerase Specificity The tridecanucleoside dodecaphosphate d (T-T-Z-C-G-T-C-A-A-A-A-T-C) incorporating the modified nucleoside 4-amino-1-(2′-deoxy-β-D-ribofuranosyl)-2(1H)-pyridinone (Z_d, 1 ) and the octanucleoside heptaphosphate d (G-A-T-T-T-T-G-A) were synthesized by the solid-phase method using the triester method. The carrier material was a copolymer consisting of styrene with 1% divinylbenzene.     

Synthesis of 4-Substituted 1H-Benzimidazole 2′-Deoxyribonucleosides and Utility of the 4-Nitro Compound as Universal Base

The stereoselective synthesis of 4-substituted 1H-benzimidazole 2′-deoxyribonucleosides is described. Regioisomeric (N¹ and N³) β-D -deoxyribonucleosides 2a–c and 3a–c were formed. ¹³C-NMR Chemical shifts of the 1H-benzimidazole 2′-deoxy-β-D -ribofuranosides were correlated with point charges of C-atoms as well as with Hammett constants of the exocyclic substituents. Phosphonate and phosphoramidite building blocks of 4-nitro-1H-benzimidazole 2′-deoxyribofuranoside ( 2a ) were prepared (see 4a, b ). Oligonucleotides of the d(A₂₀) type were synthesized in which the two central dA bases were replaced by 4-nitro-1H-benzimidazole residues. They were hybridized with oligomeric dT and related oligomers having the other conventional bases opposite to the 4-nitro-1H-benzimidazole moieties. Within these duplexes ( 12·13, 12·14, 12·15 , and 12·16 ), the destabilization was almost independent of the mismatch which is required for a universal base. The thermodynamic data indicate that the 4-nitro-1H-benzimidazole residues do not form H-bonds with opposite bases but are stabilizing the duplex by stacking interactions and favorable entropic changes.     

Nucleoside und Nucleotide. Teil 15. Synthese von Desoxyribonucleosid-monophosphaten und -triphosphaten mit 2(1H)-Pyrimidinon, 2(1H)-Pyridinon und 4-Amino-2(1H)-pyridinon als Basen

Nucleosides and Nucleotide. Part 15. Synthesis of Deoxyribonucleoside Monophosphates and Triphosphates with 2(1H)-Pyrimidinone, 2(1H)-Pyridinone and 4-Amino-2(1H)-pyridinone as the Bases The phosphorylation of the modified nucleosides 1-(2′-deoxy-β-D -ribofuranosyl)-2(1 H)-pyrimidinone (M_d, 4 ), 4-amino-1-(2′-deoxy-β-D -ribofuranosyl)-2(1 H)-pyridinone (Z_d, 6 ) and the synthesis of 1–2′-deoxy-β-D -ribofuranosyl-2(1 H)-pyrimidinone-5′-O-triphosphate (pppM_d, 1 ), 1-(2′-deoxy-β-D ribofuranosyl)-2(1 H)-pyridinone-5′-O-triphosphate (pppII_d, 2 ), and 4-amino-1-(2′-deoxy-βD -ribofuranosyl)-2(1 H)-pyridinone-5′-O-triphosphate (pppZ_d, 3 ) are described. The nucleoside-5′-monophosphates pM_d (5) and pZ_d (7) were obtained by selective phosphorylation of M_d (4) and Z_d (6) , respectively, using phosphorylchloride in triethyl phosphate or in acetonitril. The reaction of pM_d (5) pII _d (8) or pZ_d (7) with morpholine in the presence of DCC led to the phosphoric amides 9, 10 and 11 , respectively, which were converted with tributylammonium pyrophosphate in dried dimethylsulfoxide to the nucleoside-5′triphosphates 1, 2 and 3 , respectively.     

Synthesis and determination of maximum rotatory power of (+)-(S)-5-s-butyl-2(1H)-pyridinone

Optically active (S)-5-s-butyl-2(1H)-pyridinone ( 6 ) is obtained by reaction of 2-s-butylacrolein ( 1 ) and N-(carbamylmethyl)pyridinium chloride. The relationship between optical activity and minimum optical purity is determined.     

Synthesis and Characterization of Diorganotin(IV) Complexes Bearing Binary Schiff‐Bases and Crystal Structure of nBu2SnL1

Four novel diorganotin(IV) complexes with general formula R₂SnL (R = nBu, PhCH₂) were synthesized from diorganotin dichlorides and binary Schiff‐bases (H₂L) containing N₂O₂ donor atoms in the presence of sodium ethoxide. The Schiff bases were prepared by reactions of o‐phenylenediamine with 3‐tert‐butyl‐2‐hydroxy‐5‐methylbenzaldehyde (H₂L¹) and salicylaldehyde (H₂L²) respectively. The compounds were characterized by elemental analyses, IR, and NMR spectroscopy. The solid‐state crystal structure of the compound nBu₂SnL¹ was determined by single‐crystal structural analysis.     

Synthesis of novel 6-(substituted amino)-4-(4-ethoxyphenyl)-1-phenyl-2(1H)-pyridinones via azo coupling

Abstract  

6-(Substituted amino)-4-(4-ethoxyphenyl)-1-phenyl-2(1H)-pyridinones were prepared from β-aryl glutaconic acid, which, on fusion with aniline, results in 4-(4-ethoxyphenyl)-1-phenylpyridine-2,6(1H,5H)-dione. This, on further treatment with phosphorus oxychloride gave 6-chloro-4-(4-ethoxyphenyl)-1-phenyl-2(1H)-pyridinone, and further treatment with secondary amines yielded 6-(substituted amino)-4-(4-ethoxyphenyl)-1-phenyl-2(1H)-pyridinones. These were subjected to azo coupling with different aryldiazonium chlorides furnishing two isomers, which were separated by column chromatography. All compounds were characterized by elemental analysis, and use of IR and NMR spectral data, and were evaluated for antimicrobial activity.     

Synthesis of (-)-(S)-3-sec-butyl- and (+)-(S)-5-sec-butyl-2(1H)-pyridinone

Optically active (+)-(S)-5-sec-butyl- and (-)-(S)-3-sec-butyl-2(1H)-pyridinone are synthesized and the relationship between optical activity and minimum optical purity of the latter is determined.     

Coordination behavior of chromone Schiff bases towards the [ReVO]3+ and [ReI(CO)3]+ cores

Herein, we describe the coordination behavior of chromone Schiff bases towards [Re^VO]³⁺ and [Re^I(CO)₃]⁺. The reaction between 2-(2-thiolphenyliminomethyl)-4H-chromen-4-one (Htch) and [Re(CO)₅Cl] led to fac-[Re(CO)₃(bsch)Cl] (1) (bsch = 2-benzothiazole-4H-chromen-4-one). The square pyramidal [ReO(Hns)] (2) {H₂ns=bis-[(2-phenylthiolate)iminomethyl]-methyl-1-(2-hydroxyphenyl)prop-2-en-1-one} and octahedral [ReO(OCH₃)(PPh₃)(Huch)] (3) complexes were isolated from reactions of trans-[Re^VOBr₃(PPh₃)₂] with Htch and H₃uch [(5Z)-5-((4-hydroxy-2-methoxy-2H-chromen-3-yl)methyleneamino)-6-amino-1,3-dimethylpyrimidine-2,4(1H, 3H)-dione], respectively. The chromone Schiff bases and their metal complexes were fully characterized via NMR-, IR- and UV–Vis spectroscopy, single crystal XRD analysis and conductivity measurements. In addition, DFT studies were conducted to compare selected optimized and experimental parameters of the complexes.     

Synthesis,spectral studies,and antimicrobial activity of binary and ternary Cu(II), Ni(II), and Fe(III) complexes of new hexadentate Schiff bases derived from 4,6-diacetylresorcinol and amino acids

Two new hexadentate N₂O₄ donor Schiff bases, H₄L¹ and H₄L², were synthesized by condensation of 4,6-diacetylresorcinol with glycine and alanine, respectively. The structures of the ligands were elucidated by elemental analyses, IR, ¹H NMR, electronic, and mass spectra. Reactions of the Schiff bases with copper(II), nickel(II), and iron(III) nitrates in 1 : 2 molar ratio gave binuclear metal complexes and, in the presence of 8-hydroxyquinoline (8-HQ) or 1,10-phenanthroline (Phen) as secondary ligands (L′), mixed-ligand complexes in two molar ratios 1 : 2 : 2 and 1 : 2 : 1 (L¹/L² : M : L′). The complexes were characterized by elemental and thermal analyses, IR, electronic, mass, and ESR spectral studies, as well as conductivity and magnetic susceptibility measurements. The spectroscopic data reveal that the Schiff-base ligands were dibasic or tetrabasic hexadentate ligands. The coordination sites with the metal ions are two azomethine nitrogens, two oxygens of phenolic groups, and two oxygens of carboxylic groups. Copper(II) complexes were octahedral and square planar while nickel(II) and iron(III) complexes were octahedral. The Schiff bases, H₄L¹ and H₄L², and some of their metal complexes showed antibacterial activity towards Gram-positive (Staphylococcus aureus and Streptococcus pyogenes) and Gram-negative (Pseudomonas fluorescens and Pseudomonas phaseolicola) bacteria and antifungal activity towards the fungi Fusarium oxysporium and Aspergillus fumigatus.     

Syntheses,spectroscopy, and X-ray structures of 3-{(R)-(Ar)-ethylimino}-1,3-dihydro-indol-2-one (Ar = Ph,MeOC6H4, BrC6H4, 1-naphthyl) and [Rh(η4-cod){3-((R)-(Ar)-ethylimino)-3H-indol-2-olato}]

Condensation of 1H-indole-2,3-dione (isatin) with (R)-(Ar)-ethylamines gives enantiopure Schiff bases, 3-{(R)-(Ar)-ethylimino}-1,3-dihydro-indol-2-one (HL) {Ar?=?Ph (HL1), 2-MeOC₆H₄ (HL2), 4-MeOC₆H₄ (HL3), 4-BrC₆H₄ (HL4), and 1-naphthyl (HL5)}. The Schiff bases readily coordinate to [Rh(μ-O₂CMe)(η⁴-cod)]₂ (cod?=?1,5-cyclooctadiene) to give mononuclear [Rh(η⁴-cod){3-((R)-(Ar)-ethylimino)-3H-indol-2-olato}] {Ar?=?Ph (1), 4-MeOC₆H₄ (2), and 4-BrC₆H₄ (3)}, respectively. The Schiff bases and complexes have been fully characterized by IR, UV-Vis, ¹H-NMR, mass, and circular dichroism (CD) spectrometry. Polarimetry and CD measurements show the enantiopurity of the Schiff bases as well as the complexes. ¹H NMR measurements reveal slow conversion of the lactam to the enol form of the Schiff bases in solution. In the solid state the lactam form dominates as shown by crystal structures of HL1 and HL4. While gross structural features of both are similar, the molecules differ significantly in the relative orientations of the aryl and lactam rings. The difference is mostly rotation about the N2–C9 bond with different C8–N2–C9–C11 torsion angle of +89.77(12)° for HL1 and C2–N2–C9–C11 of +106.8(3)° for HL4.     

Synthesis of novel dihydrofuro[b]-pyridinone derivatives: oxidation coupling of 3-hydroxy-4(1H)-pyridinone with β-dicarbonyl compounds

Oxidation coupling of 3-hydroxy-4(1H)-pyridinone with β-dicarbonyl compounds led to unexpected dihydrofuro[b]-pyridinone derivatives, indicating an alternative pathway other than that with anilines or thiols. By this strategy, six novel dihydrofuro[b]-pyridinone derivatives were synthesized.     

Experimental and theoretical studies of the products of addition–elimination reactions between benzil dihydrazone and three isomeric chlorobenzaldehydes

A series of mono‐ and di‐Schiff bases formed between benzil dihydrazone {BDH; systematic name: (1Z)‐[(2E)‐2‐hydrazinylidene‐1,2‐diphenylethylidene]hydrazine} and three isomeric chlorobenzaldehydes were designed and synthesized to be used as model compounds to help to explain the reaction mechanisms for the formation of Schiff bases. These compounds are 1‐(2‐chlorobenzylidene)‐2‐{2‐[2‐(2‐chlorobenzylidene)hydrazin‐1‐ylidene]‐1,2‐diphenylethylidene}hydrazine (BDHOCB), and the 3‐chloro (BDHMCB) and 4‐chloro (BDHPCB) analogues, all having the formula C₂₈H₂₀Cl₂N₄. Surprisingly, only di‐Schiff bases were obtained; our attempts to push the reaction in favour of the mono‐Schiff bases all failed. Density functional theory (DFT) calculations were performed to explain the trend in the experimental results. In the case of the systems studied, the type of Schiff base produced exhibits a clear dependence on the HOMO–LUMO energy gaps (ΔE_HOMO–LUMO), i.e. the product is mainly governed by its stability. The compounds were characterized by single‐crystal X‐ray diffractometry, elemental analysis, melting point, ¹H NMR and ¹³C NMR spectroscopy. The structural features of the three new Schiff bases are similar. For instance, they have the same chemical formula, all the molecules have a symmetrical double helix structure, with each Ph—C=N—N=C—Ph arm exhibiting an anti conformation, and their supramolecular interactions include intermolecular π–π and weak C—H...π stacking interactions. The crystal systems are different, however, viz. triclinic (space group P) for BDHPCB, monoclinic (space group P2₁/n) for BDHOCB and orthorhombic (space group Pnna) for BDHMCB.     

Synthesis and characterization of nickel(II) complexes with three potentially hexadentate Schiff-base ligands and polyamines: X-ray crystal structure determination of one nickel(II) complex

Three new potentially hexadentate N₄O₂ Schiff-base ligands (H₂L¹, H₂L² and H₂L³) were prepared from the reaction of the polyamines N,N′-bis(2-aminophenyl)-1,2-ethanediamine (L¹), N,N′-bis(2-aminophenyl)-1,3-propanediamine (L²) and N,N′-bis(2-aminophenyl)-1,4-butanediamine (L³), respectively with salicylaldehyde. Reaction of the Schiff bases with Ni(II) salts in the presence of N(Et)₃ gave the neutral complexes [NiL⁴], [NiL⁵] and [NiL⁶]. Ni(II) complexes of the polyamines were also prepared. One of complexes [Ni(L¹)(MeCN)₂](ClO₄)₂·MeCN has been characterized through X-ray diffraction methods.     

Ensembles of indium and gallium fluoroanions with HF molecules and bipyridine cations

Compounds [H₂L¹][Ga(H₂O)₂F₄]₂ · H₂O (I), [H₂L¹] _n [InF₅] _n · (2HF) _n (II), and [H₂L₂][In(H₂O)F₅] · HF (III) were identified as the major phases in the products of the reactions between MF₃ · 3H₂O (M = Ga, In) and ditopic bases 4,4′-trimethylenedipyridine (L¹) and 4,4’-trimethylenedipiperidine (L²) in HF solutions under common and hydrothermal conditions.     

Ruthenium(II) and ruthenium(III) complexes derived from O,O-donor ligands

The new [Ru¹¹(PPh₃)₂L₂] complexes [L=monoanion of tropolone, benzoylacetone, or 3-hydroxy-2-pyridinone (hypy)], [RuH(PPh₃)₃L′][HL′=maltol, dibenzoylmethane or 1,2-dimethyl-3-hydroxy-4-pyridinone (Hdmhypy)] and [Ru^IIIX₂(EPh₃)₂L″] complexes (X=Cl, Br; E=As or P; L″=hypy, dmhypy) have been prepared, and characterized by spectroscopic techniques. Their redox behaviour was studied by cyclic voltammetry. Most of the complexes were found to be effective catalysts for the oxidation ofp-methoxybenzyl alcohol to the corresponding aldehyde in the presence ofN-methylmorpholine-N-oxide as co-oxidant.     

The relationship between ligand structures and their CoII and NiII complexes: Synthesis and characterization of novel dimeric CoII/CoIII complexes of bis(thiosemicarbazone)

4,6-Diacetylresorcinol serves as a starting point for the generation of multidentate S/N/O or O/N/O symmetrical chelating agents by condensation with thiosemicarbazide or semicarbazide to yield the corresponding bis(thiosemicarbazone) H₄L¹ or bis(semicarbazone) H₄L², respectively. Reaction of H₄L¹ and H₄L² with M(NO₃)₂·6H₂O (M?=?Co or Ni) afforded dimeric complexes for H₄L¹ and binuclear complexes for H₄L², revealing the tendency of S to form bridges. The dimeric cobalt complexes of H₄L¹ are very interesting in that they contain Co^II/Co^III, side/side, low-spin octahedral coordinated Co^III-ions and high-spin square-planar coordinated Co^II-ions. These complexes have the general formula [(H₂L¹)₂Co₂(H₂O) (NO₃)]·nEtOH. Arguments supporting these anomalous Co^II/Co^III structures are based on a pronounced decrease in their magnetic moments, elemental and thermal analyses, visible and IR spectra, as well as their unreactivity towards organic bases such as 1,10-phenanthroline (phen), 2,2′-bipyridine (Bpy), N,N,N′,N′-tetramethylethylenediamine (Tmen) and 8-hydroxyquinoline (oxine, Ox). The dimeric octahedral Ni^II complex [(H₂L¹)₂Ni₂(H₂O)₄]·3H₂O showed higher reactivity towards phen and Bpy and formed adducts; [(HL¹)Ni₂(B)(H₂O)₅] NO₃ (B?=?phen or Bpy). In the presence of oxine, the dimeric brown paramagnetic octahedral complex [(H₂L¹)₂Ni₂(H₂O)₄]·3H₂O was transformed to the dimeric brick-red diamagnetic square-planar complex [(H₃L¹)₂Ni₂](NO₃)₂. The latter showed dramatic behavior in its ¹H NMR spectrum in DMSO-d ₆, which was explained on the basis of H⁺-transfer. By contrast, the binuclear Ni^II–H₄L² complex (11) showed higher reactivity towards phen, Bpy and oxine. These reactions afforded mixed dimeric complexes having the molar ratio 2?:?2?:?1 (Ni^II?:?H₄L²?:?base). The binuclear Co^II–H₄L² complex afforded an adduct with phen and trinuclear complexes with Bpy and oxine. All complexes were found to be unreactive towards Tmen. Structural characterization was achieved by elemental and thermal analyses, spectral data (electronic, IR, mass and ¹H NMR spectra) and conductivity and magnetic susceptibility measurements.     

New diorganotin(IV) complexes with some Schiff bases derived from β-diketones: synthesis,spectral properties,thermal analysis,and antibacterial activity

The Schiff bases H₂L^a, H₂L^b, and H₂L^c have been prepared from the reaction of 2-amino-4-chlorophenol with acetylacetone, benzoylacetone, and dibenzoylmethane, respectively. Organotin(IV) complexes [SnPh₂(L^a)] (1), [SnPh₂(L^b)] (2), [SnPh₂(L^c)] (3), and [SnMe₂(L^c)] (4) have been synthesized from the reaction of SnPh₂Cl₂ and SnMe₂Cl₂ with these Schiff bases. The synthesized complexes have been characterized by elemental analysis and FT-IR, ¹H, ¹³C, and ¹¹⁹Sn NMR spectroscopy. Spectroscopic data suggest the Schiff bases are completely deprotonated and coordinated tridentate to tin via imine nitrogen and phenolic and enolic oxygen atoms; the coordination number of tin is five. Thermal decomposition of the complexes has been studied by thermogravimetry. The in vitro antibacterial activities of the Schiff bases and their complexes have been evaluated against Gram-positive (Bacillus subtilis and Staphylococcus aureus) and Gram-negative (Escherichia coli and Pseudomonas aeruginosa) bacteria. H₂L^a, H₂L^c, and all complexes exhibited good activities and have potential as drugs.     

Incorporation of Titanium(IV) into Sterically Hindered Schiff Bases of Heterocyclic β -Diketones Involving Ketooximes and Glycol as Coligands: Preparation and Structural Considerations

Titanium(IV) complexes of the general formula TiL(OPr ⁱ )₂ [where LH₂ = R CH₃ where R = ─C₆H₅, ─C₆H₄Cl(p)] were prepared by the interaction of titanium isopropoxide with sterically hindered Schiff bases derived from heterocyclic β -diketones in 1:1 molar ratio in dry benzene. The complexes TiL(OPr ⁱ )₂ were used as versatile precursors for the synthesis of other titanium(IV) complexes. Titanium(IV) complexes of the type TiLL'(OPr ⁱ ) (where L'H═R¹R²C═NOH, R¹ = R² = ─CH₃; R¹ = ─CH₃,R² = ─C₆H₅; R¹ = ─COC₆H₅, R² = ─C₆H₅) were synthesized by the reaction of TiL(OPr ⁱ )₂ with ketooximes (L'H) in equimolar ratio in dry benzene. Another type of titanium(IV) complexes having the general formula TiLGH(OPr ⁱ ) (where GH₂═HO─G─OH, G = ─CH₂─CH₂─) have been prepared by the reaction of TiL(OPr ⁱ )₂ with glycol in 1:1 molar ratio in dry benzene. Plausible structures of these new titanium(IV) complexes have been proposed on the basis of analytical data, molecular weight measurements, and spectral studies.     

Characterization of synthetic N-acetylcysteine conjugates by positive- and negative-ion 252Cf plasma desorption mass spectrometry

N-Acetylcysteine and nine N-acetylcysteine conjugates of synthetic origin were characterized by positive- and negative-ion plasma desorption mass Spectrometry. For sample preparation the electrospray technique and the nitrocellulose spin deposition technique were applied. The fragmentation of these compounds, which are best seen as S-substituted desaminoglycylcysteine dipeptides, shows a similar behaviour to that of linear peptides. In the positive-ion mass spectra intense protonated molecular ion peaks are observed. In addition, several sequence-specific fragment ions (A⁺, B⁺, [Y + 2H]⁺, Z⁺), immonium ions (I⁺) and a diagnostic fragment ion for mercap-turic acids (R_M⁺) are detected. The negative-ion mass spectra exhibit deprotonated molecular ions and in contrast only one fragment ion corresponding to side-chain specific cleavage ([R_XS]^?) representing the xenobiotic moiety. In the case of a low alkali metal concentration on the target, cluster molecular ions of the [nM + H]⁺ or [nM - H]^? ion type (n = 1-3) are observed. The analysis of an equimolar mixture of eight N-acetylcysteine conjugates shows different quasi-molecular ion yields for the positive- and negative-ion spectra.     

Synthesis,structures, and urease inhibition of nickel(II), zinc(II), and cobalt(II) complexes with similar hydroxy-rich Schiff bases

Four new nickel(II), zinc(II), and cobalt(II) complexes, [Zn(L¹)₂]?·?H₂O (1), [Ni(L¹)₂]?·?H₂O (2), [Ni(L²)₂] (3), and [Co(L³)₂]?·?H₂O (4), derived from hydroxy-rich Schiff bases 2-{[1-(5-chloro-2-hydroxyphenyl)methylidene]amino}-2-methylpropane-1,3-diol (HL¹), 2-{[1-(2-hydroxy-3-methoxyphenyl)methylidene]amino}-2-ethylpropane-1,3-diol (HL²), and 2-{[1-(5-bromo-2-hydroxyphenyl)methylidene]amino}-2-methylpropane-1,3-diol (HL³) have been synthesized and characterized by elemental analyses, infrared spectroscopy, and single-crystal X-ray determination. Each metal in the complexes is six-coordinate in a distorted octahedral coordination. The Schiff bases coordinate to the metal atoms through the imino N, phenolate O, and one hydroxyl O. In the crystal structures of HL¹ and the complexes, molecules are linked through intermolecular O–H···O hydrogen bonds, forming 1-D chains. The urease inhibitory activities of the compounds were evaluated and molecular docking study of the compounds with the Helicobacter pylori urease was performed.