Lectin-Triggered Aggregation of Glyco-Gold Nanoprobes for Activity-based Sensing of Hydrogen Peroxide by the Naked Eye

The purpose of this study was to develop a colorimetric assay for detecting hydrogen peroxide (H₂O₂) through a combination of using an aryl boronate (AB) derivative and gold nanoparticles (AuNPs). The unique optical property of AuNPs is applied to design a detection probe. The aggregation of AuNPs could be directly observed as a color change by the naked eye. A mannoside-boronate-sulfide ( MBS ) ligand was designed that contains an arylboronate (AB), a mannoside, and a thiol group. The thiol group bonds covalently with the surface of AuNPs to obtain MBS@AuNPs. The mannoside moiety recognizes concanavalin A (Con A), a lectin with four carbohydrate recognition sites that can specifically recognize the non-reducing end of an α-D-mannoside or α-D-glucoside structure. The AB structure on MBS first reacts with H₂O₂ and then inserts an oxygen atom in the B−H bond, which triggers intramolecular electron rearrangement to cleave the covalent bond, resulting in a MBSt mixture. The MBS or MBSt is then modified to citrate-coated AuNPs (c-AuNPs) to have MBS@AuNPs or MBSt@AuNPs. When the MBS@AuNPs are incubated with Con A, the Con A recognizes multiple mannosides on the surface of the MBS@AuNPs. Subsequently, the MBS@AuNPs aggregate and the solution's color changes from red to purple, but this color change does not occur in the case of MBSt@AuNPs. The phenomenon can be observed by the naked eye.     

Isolement de l'acide 3-amino 12-methyl tetradecanoique et de l'acide 3-amino 12-methyl tridecanoique a partir de l'iturine,antibiotique de Bacillus subtilis

lturin, a peptide antibiotic from Bacillus subtilis, was separated into three iturins: A, B, C by thin-layer chromatography. Iturin A, which has an antifungal activity, contains Asp, Glu, Tyr, Ser, Pro in a molar ratio 3:1:1:1:1 and a lipid moiety AL. The latter was shown to be a mixture of C₁₄ (40%) and C₁₅, (60%) amino-acids. The structure of these was determined by combined gas chromatography-mass spectrometry of the N-acetylmethyl esters. Strong peaks at m/e = 144 and m/e = 102 indicate a β-amino group. Identification of acetone and methylethylketone after chromic acid oxidation indicates an iso and anteiso structure. After comparison of the natural amino-acids with synthetic 3-amino pentadecanoic acid it is concluded that the lipid AL is a mixture of 3-amino 12- methyltetradecanoic acid and 3-amino 12-methyltridecanoic acid.     

The Reaction of Diethylthiophosphinyl Iodide,Et2P(S)I,with Nucleophiles

The compound Me₂AsSI can exist in two different forms, either as dimethylarsinosulfenyl iodide [or (iodothio)dimethylarsane)], Me₂As–S–I ( A ), or as dimethylthioarsinyl iodide (or dimethylarsinothioic iodide), Me₂As(S)–I ( B ). To confirm that the structure of the product of the reaction between Bunsen's cacodyl disulfide Me₂As(S)–S–AsMe₂ and iodine is A and not B , the known diethylthiophosphinyl iodide (or diethylphosphinothioic iodide), Et₂P(S)–I ( 2 ) was prepared and its hydrolytic stability and reactivity towards a variety of nitrogen, phosphorus(III), arsenic(III), oxygen, and sulfur(II) nucleophiles were studied. The results indicated that only a few reactions of 2 resembled those of A , thus strengthening the proposal that the reaction of Bunsen's cacodyl disulfide with iodine produced A and not B . A series of ³¹P NMR chemical shifts of diethylthiophosphinyl moiety is also reported. Et₂P(S)–DMAP, synthesized and isolated during the presented study, is the ethyl analogue of Me₂P(S)–DMAP, previously described as an important molecule. In our case, Et₂P(S)–DMAP was found to be a good intermediate for the synthesis of phosphoryl or thiophosphoryl derivatives since it was more reactive than 2 towards nucleophiles.     

Triosmium-induced dehydrogenation of triethylamine. The crystal structure of HOs3 (CO)10 (−CHCH+NEt2)

The reaction of Os₃ (CO)₁₀(NCCH₃)₂ and triethylamine provides H₂ Os₃ (CO)₁₀ and HOs₃ (CO)₁₀(CHCHNEt₂) in equimolar amounts. The structure of the latter compound has been shown to involve an iminium ion center anchored to the Os₃ framework by a bridging (substituted) methylene moiety.     

(E)‐5‐[(4‐Nitro­phenyl­hydrazono)­phenyl­acetyl]‐3‐phenyl­isoxazole

The title compound, C₂₃H₁₆N₄O₄, can be considered as consisting of two connected fragments: a nitro­phenyl­hydrazone moiety, which assumes an E configuration, and an isoxazole moiety. In this latter fragment, the weak π‐electron delocalization shortens the carbonyl–isoxazole O?O distance [2.643 (2) Å] to less than the van der Waals radii sum.     

A Study on AB2X5 Compounds (A: K,In, Tl; B: Sr,Sn, Pb; X: Cl,Br, I)

The synthesis and the lattice constants of AB₂X₅ compounds with A = K, In, B = Sr, Sn, Pb and X = Cl, Br, I are reported. All compounds have either the monoclinic NH₄Pb₂Cl₅ or the tetragonal NH₄Pb₂Br₅ structure. For KPb₂Br₅ the former is shown to be the high temperature form and the latter is obtained under high pressure. It is shown that all known compounds of this family can clearly be separated with respect to their structure in a structure field diagram on the basis of the size relations A/X and B/X.     

Crystal structure of an optically active non-symmetric liquid crystal dimer: cholesteryl 5-[4-(4-n-heptylphenylethynyl)phenoxy]pentanoate

The crystal structure of cholesteryl 5-[4-(4-n-heptylphenylethynyl)phenoxy]- pentanoate (C₅₃H₇₆O₃) was determined by direct methods using single crystal X-ray diffraction data. It crystallises in the triclinic system with space group P1 and Z?=?2. The unit cell parameters are: a?=?10.6791(5), b?=?13.0903(7), c?=?18.6430(9)Å, α?=?94.413(3), β?=?98.222(3), γ?=?112.987(3)°. The final reliability factor was R?=?0.0510 for 7284 observed reflections and the goodness of fit was equal to 1.062. The asymmetric unit cell of the compound was found to contain two symmetry-independent molecules, A and B. In both molecules, the six-membered rings of the cholesterol moiety are conformationally very similar. However, pronounced differences were observed in the conformation of the five-membered ring, which is a half-chair in molecule A and assumes an envelope conformation in molecule B. In both molecules, the phenyl rings are planar. The dihedral angle between the two phenyl rings is 43.4(2) and 42.7(2)° for molecules A and B, respectively. The packing of molecules in the crystalline state was found to be a precursor to the smectic A phase structure. The crystal structure is stabilised by inter-molecular C–H…O and C?H…π interactions.     

Synthesis and polymerization of coupled compounds of 1,11-dodecadiyne

The dimer, trimer, and tetramer of 1,11-dodecadiyne, HC?C? (CH₂)₈? C?CH, were synthesized. The solid-state polymerization of the dimer was investigated by infrared (IR) spectroscopy. IR bands due to the diacetylene moiety were identified through the comparison of the IR spectra of the dimer, trimer, and tetramer. The dimer was found to have two polymorphs, melt-crystallized and solution-crystallized. Both of the polymorphs undergo solid-state polymerization by exposure to γ-ray or UV irradiation. The former has higher polymerizability for the diacetylene moiety than the latter. The solid-state polymerization of the terminal acetylene group was not observed. It is shown that the previously reported dimer structure in which both the diacetylene and terminal acetylene groups are polymerized to form an inherently electrically conducting polymer is incorrect. © 1995 John Wiley & Sons, Inc.     

Studies in the chemistry of erythrina alkaloide derivatives—II : Synthesis and stereochemistry of decahydro-3-methyl-6H-pyrido]2,1-i]indole

1,2,3,4,7,7a,8,9,10,11-Decahydro-3-methyl-6$\text{H}$-pyrido[2,1-i]indole was prepared as an example of an erythrinane derivative lacking the aromatic moiety. The stereochemical structure of this compound and its 6-oxo derivative were found to be predominantly cis A/B, trans B/C, axial CH₃ and cis A/B, axial CH₃, respectively.     

A New Class of Nucleoside Analogues. Synthesis of N. -Pyrimidinyl-and N9-Purinyl-4′-hydrqxy-3-(Hydsoxymethyl)butanes1 # 2

Interest in non-glycosidic derivatives of the nucleo-bases uracil, theymine, cytosine, adenine and guanine stems from their status as nucleoside analogues. It is noteworty in this connection that the anti-biotics aristeromycin³ and eritadenine⁴ consist of an adenine moiety linked, via N₉ -, to a cyclopentyl or a butiric acid derivative, respectively, in place of the conventional nucleoside sugars. A non-glycoaidic 5-fluorouracil derivative⁵ has been recently reported to be clinically effective in the treatment of Gastrointestinal cancer. In this communication the ficile synthesis of 4-hydroxy-3-(hydroxymethyl)butyl derivatives of the nucleobases (1) is described. These nucleoside analogues are characterized by the special feature that they incorporate two hydroxyl functions in a relationship corresponding to the 3′-and 5′-hydroxy groups of the 2-deodyribose Doiety. Phosphorylationj of the hydroxyl groups or their linkage via phosphodiester of the hydroxyl groups or their linkage via phosphodiester bridges should give nucleotide analogues or novel nucleic acid models. The latter molecular systems constitute a new class of potential anti-mitotic or anti-viral agents. One principle synthetic approach to compounds of general structure 1 was visualized via the intermediacy of 2-(hydroxymethyl) - 4-aminobutanol (2, ReH) which, acting as a common precursor, could be elaborated to the desired pyrimidine or purine derivative, via its amine function. The synthesis of amine 2 was achieved according to the reaction sequence described in Scheme I. Diethyl malonate was coupled with 2,2-dimethoxybromoethane, in presence of sodium ethoxide (EthoH, 170°, autoclave). The resulting diester (3) was reduced with LialH₄ to the corresponding diol (4), which was benzylated (NaH, C₆H₅CH₂Cl) to 5. When 5 was refluxed with NH₂OH.HCl in methanol for 30 min., a mixture of oximes 6a,b (syn- and anti-) and nitrile 7 was isolated. The latter mixture could be directly reduced with LiAlH₄ to amine 2,⁶ in high yield.     

Two-dimensional molecular pattern in the structure of a calcium(II) complex with pyrazine-2,3-dicarboxylate and water ligands

The structure of di(aquo-O)(pyrazine-2,3-dicarboxylato-N,O; -O′,O′′) calcium(II) hydrate [Ca(2,3-PZDC)(H₂O)₂·;H₂O] contains molecular sheets in which Ca(II) ions are bridged by the carboxylate groups of the ligand molecules. Two bridging paths are evident. In the first, an N,O-bonding moiety formed by a hetero-ring nitrogen atom and the carboxylate oxygen atom nearest to it and both oxygen atoms of the second carboxylic group are active. The second path is formed by the other oxygen atom from the carboxylic group involved in the N,O-bonding moiety and an oxygen atom from the second carboxylic group. The latter atom is bidentate. A two-dimensional molecular pattern is formed. Each Ca(II) ion is also coordinated by two water oxygen atoms, making the number of coordinated atoms eight. The coordination polyhedron is a distorted pentagonal bipyramid with an oxygen atom at the apex on one side of the equatorial plane and two oxygen atoms forming the apices on the other side.     

Adventitious formation of a new oxopentadienyl Mn(I) tricarbonyl complex: Structural study and bonding investigation of (η-CH2C(Fc)CHC(Fc)O)Mn(CO)3

A Mn(I) tricarbonyl complex of a 1,3-diferrocenyl-1-oxopentadienyl ligand was synthesised adventitiously by what seems to be an in-situ aldol-like condensation of two acetylferrocene units promoted by benzyl-Mn(CO)₅. X-ray structural analysis of this unexpected product confirms the η⁵ coordination of the 1,3-diferrocenyl-1-oxopentadienyl ligand to the Mn(CO)₃ moiety. The nature of the metal-ligand bonding relationship was studied by theoretical calculations; it outlines the charge unbalance (polarisation) at the oxopentadienyl moiety as well as the lack of ketone character of the latter Mn-bound ligand.     

Total Synthesis of 1‐Hydroxytaxinine

1‐Hydroxytaxinine ( 1 ) is a cytotoxic taxane diterpenoid. Its central eight‐membered B‐ring possesses four oxygen‐functionalized centers (C1, C2, C9, and C10) and two quaternary carbon centers (C8 and C15), and is fused with six‐membered A‐ and C‐rings. The densely functionalized and intricately fused structure of 1 makes it a highly challenging synthetic target. Reported here is an efficient radical‐based strategy for assembling 1 from A‐ and C‐ring fragments. The A‐ring bearing an α‐alkoxyacyl telluride moiety underwent intermolecular coupling with the C‐ring fragment by a Et₃B/O₂‐promoted decarbonylative radical formation. After construction of the C8‐quaternary stereocenter, a pinacol coupling reaction using a low‐valent titanium reagent formed the B‐ring with stereoselective installation of the C1,C2‐diol. Subsequent manipulations at the A‐ and C‐rings furnished 1 in 26 total steps.     

C−F Bond Activation by a Saturated N‐Heterocyclic Carbene: Mesoionic Compound Formation and Adduct Formation with B(C6F5)3

The reaction of SIPr, [1,3‐bis(2,6‐diisopropylphenyl)‐imidazolin‐2‐ylidene] ( 1 ), with C₆F₆ led to the formation of an unprecedented mesoionic compound ( 2 ). The formation of 2 is made accessible by deprotonation of the SIPr backbone with simultaneous elimination of HF. The C?F bond para to the imidazolium ring in 2 is only of 1.258(4) Å, which is the one of the shortest structurally authenticated C?F bonds known to date. The liberation of HF during the reaction is unequivocally proved by the addition of one more equivalent of SIPr, which leads to the imidazolium salt with the HF₂^? anion. To functionalize 2 , the latter reacted with B(C₆F₅)₃ to give an unusual donor–acceptor compound, where the fluoride atom from the C₆F₅ moiety coordinates to B(C₆F₅)₃ and the carbanion moiety remains unaffected. Such coordination susceptibility of the fluoride atom of a nonmetallic system to a main‐group Lewis acid (F_non‐metal→BR₃) is quite unprecedented.     

Triple B≡B bond: from a perfect Lewis structure to a dominant π-back-donation. The need for a reference point

Abstract

Coordination of a B₂ fragment by two σ-donor ligands could lead to complexes with a formal triple B≡B bond L→B≡B←L. Formation of L-B σ-bond leads to excess electrons around the B₂ central fragment. A subsequent direct π-charge transfer from B≡B moiety to the ligands L is a necessary condition for incorporation of BB fragment to the conjugated LBBL system. Quantum-chemical calculations (DFT, CCD, and CAS) show that the stabilization of a linear L-BB-L structure is possible but is accompanied by lowering of the B-B bond order. The ammonia-boryne structure H3N→BB←NH₃, which is studied as a model system, shows a perfect triple BB fragment relative to other LBBL adducts. The comparison of the conjugation between the B₂ fragment and two types of σ-donor ligands, with or without π-back-donation, provides an indication of the character of BB multiple bond. Three studied boryne molecules are calculated to have a high barrier for dissociation XXBBXX→XX?+?BBXX, yet a high reactivity of these compounds is indicated by the low-lying excited states of borynes (ΔE_S0-S1<1.5?eV). The largest gap ΔE_S0-S1～2.6?eV is calculated for the room temperature stable bis-NHC-boryne.     

1‐{5‐[2‐(Tri­fluoro­methyl)­phenyl]‐1,3,4‐thia­diazol‐2‐yl}guanidinium chloride

In the title compound, C₁₀H₉F₃N₅S⁺·Cl^?, which was developed as a potential anticonvulsant, the phenyl ring, the thia­diazo­le ring and the guanidinium moiety are all planar. There is a dihedral angle of 48.9 (1)° between the thia­diazole and phenyl rings which prevents steric hindrance arising from the π bonds within the former, and the tri­fluoro­phenyl moiety attached to the latter. The thia­diazole and guanidinium moieties are twisted by 12.7 (2)° with respect to each other. An extensive network of hydrogen bonds, predominantly involving the chloride ion, maintains the crystal structure.     

Synthesis,Characterization, Molecular Structure,and Electrochemistry of a New Ferrocenoyl Derivative

A new organometallic compound containing a heterocyclic amine linked to the ferrocenoyl moiety was synthesized and characterized by elemental analysis (C, H, N), mass spectrometry, IR and ¹HNMR spectroscopy. Its crystal and molecular structure was determined by X‐ray diffraction methods. This compound crystallizes in the monoclinic P2₁ space group, a = 5.80260(10), b = 9.24160(10), c = 12.3510(2) Å, β = 92.8200(10)° and Z = 2. An interesting feature of the crystal structure is the presence of an intermolecular non‐classical hydrogen bonding interaction between a cyclopentadienyl hydrogen atom and a carbonyl oxygen group. The electrochemical behaviour of this compound is characterized by the reversible one‐electron oxidation of the ferrocene moiety.     

Trans‐A2B‐corroles Bearing a Coumarin Moiety ‐ From Synthesis to Photophysics

Four dyads comprised of corrole and coumarin units have been synthesised. Three coumarincarboxaldehydes were synthesized and transformed into the corresponding trans‐A₂B‐corroles by reaction with 5‐(pentafluorophenyl)dipyrromethane. It has been proven that this type of direct condensation can lead to the corresponding corroles in moderate yields. The reaction of hydroxybenzaldehydes with vinylphosphonium salts has been identified as the most general method for the preparation of formyl‐coumarins with various patterns of substituents. The dyad consisting of ketobiscoumarin and corrole was synthesized by Sonogashira coupling. Spectroscopic and photophysical investigations revealed that there is an efficient energy transfer from the coumarin moiety to corrole in all four dyads. Energy transfer can be clearly ascribed to a dipole–dipole mechanism (Förster) for all dyads that contain luminescent coumarins and to an electron exchange mechanism (Dexter) for the dyad with the non‐luminescent one. In the case of the dyad that bears coumarin with a hydroxy group at position 5, an electron‐transfer was detected from corrole to coumarin. The latter process is possible because of the suitably low reduction potential of coumarins of this type.     

Non‐mutagenic organic pigment intermediates. I. 3,3′‐Dipropoxybenzidine

Crystals of the title compound, C₁₈H₂₄N₂O₂, were grown from ethanol by slow evaporation and the structure has been determined. The mol­ecule resides on a crystallographic inversion center and the bi­phenyl moiety is essentially planar. The structure forms an infinite two‐dimensional array of N—H⋯π(arene) interactions parallel to the (101) direction.     

Intermolecular interactions in normal-phase HPLC systems with alcohol hydrocarbon eluents

Summary We apply our new retention model introduced elsewhere to the studies of intermolecular interactions between the solute and the remaining components of a normal-phase HPLC system using a binary mobile phase consisting of an alcohol and a hydrocarbon. This can be achieved through the analysis of the regressional parameters A, B, and C appearing in the relationship of solute retardation (R_F) vs. mobile phase composition. Negative values of these parameters indicate a greater affinity of the solute to the stationary phase than to a given mobile phase moiety, whereas positive values have a reverse meaning. According to the absolute values of A, B, and C solute groups can be arranged according to the affinity toward a given mobile phase moiety, which is a detailed and important information regarding their separation, the stationary phase and with each individual constituent of the mobile phase.