A cyclic hexapeptide comprising alternating alpha-aminoxy and alpha-amino acids is a selective chloride ion receptor

In nonpolar solvents, the cyclic hexapeptide 2, which comprises alternating D-alpha-amino and D-alpha-aminoxy acids, adopts a C3-symmetric conformation with alternating eight (N--O turns)- and seven (gamma turns)-membered-ring hydrogen bonds. A series of anion-binding studies has suggested that 2 can function as an effective anion receptor that not only displays a high selectivity for chloride ions, but also the capability to extract chloride ions from aqueous solutions into organic phases.     

Cyclic aromatic oligoamides as highly selective receptors for the guanidinium ion

A class of six-residue, shape-persistent aromatic oligoamide macrocycles bind the guanidinium ion with very high selectivity.     

A reverse turn structure induced by a D,L-alpha-aminoxy acid dimer

Our previous work revealed that two adjacent D-alpha-aminoxy acids could form two homochiral N-O turns, with the backbone folding into an extended helical structure (1.8(8)-helix). Here, we report the conformational studies of linear peptides 3-6, which contain a D,L-alpha-aminoxy acid dimer segment. The NMR and X-ray analysis of 3 showed that it folded into a loop conformation with two heterochiral N-O turns. This loop segment can be used to constrain tetrapeptides 4 and 6 to form a reverse turn structure. (1)H NMR dilution studies, DMSO-d6 addition studies, and 2D-NOESY data indicated that tetrapeptides 4 and 6 folded into reverse turn conformations featured by a head-to-tail 16-membered-ring intramolecular hydrogen bond. In contrast, tetrapeptide 5 with L-Ala instead of Gly or D-Ala as the N-terminal amino acid could not form the desired reverse turn structure for steric reasons. Quantum mechanics calculations showed that model pentamide 7, with the same substitution pattern of 4, adopted a novel reverse turn conformation featuring two heterochiral N-O turns (each of an 8-membered ring hydrogen bond), a cross-strand 16-membered ring hydrogen bond, and a 7-membered ring gamma-turn.     

Tetrapyrrole cation receptor for selective binding fluoride ion

The 5,10,15,20-tetraphenyl-2,3,7,8,12,13,17,18,21,22,23,24-dodecamethylporphyrin ditriflate was synthesized and its complexing properties toward fluoride ion were investigated by spectrophotometric titration in the acetonitrile-tetrabutylammonium fluoride system. We found that at the complexation the two triflate counterions are replaced by the fluoride ions. The stability constants of the complexes and the concentration ranges of their existence were determined.     

Resonant laser ablation as a selective metal ion source for gas-phase ion molecule reactions

Resonant laser ablation (RLA) is used as a source to selectively generate multiple metal ion species from the same sample. The capability of rapidly changing metal ions for gas-phase ion chemistry studies is a significant advantage in ion-molecule chemistry. The simple experimental arrangement uses relatively modest laser pulse energies (≤ 25 µJ/pulse) from a tunable dye laser to desorb and selectively ionize different metal atoms from a multicomponent sample. In turn, this allows the chemistry of several components to be investigated without breaking vacuum or altering the experimental geometry. This work demonstrates the use of RLA as a selective source of several reagent metal ions for gas-phase ion chemistry investigations. In particular, the reactivity of acetone with Cr⁺, Fe⁺, Ni⁺, and Cu⁺ was examined for metal ions selectively created by RLA from a standard steel sample.     

Cyclic peptide nanocapsule as ion carrier for halides: a theoretical survey

In this work, the encapsulations of halide ions including F^?, Cl^?, and Br^? by cyclic peptide nanocapsule as ion carrier (F^?, Cl^?, and Br^? @(Ala4...Ala4)) were investigated using the dispersion corrected density functional theory (DFT) employing CAM-B3LYP functional and the 6–311?+?G (d, p) basis set in the gas phase. The electronic binding energy (E_bind), binding enthalpy (H_bind), and binding Gibbs free energy (G_bind) for each anion were calculated and showed that the stability order of the complexes based on their calculated E_bind is F^??>?Cl^??>?Br^? @(Ala4...Ala4). The calculated value of G_bind for F^? @(Ala4...Ala4) was ??29.77 kcal/mol showing the formation of this complex is thermodynamically favorable while the formation of Br^? @(Ala4...Ala4) is 14.35 kcal/mol which shows that the encapsulation of Br^? is not possible. The calculated value of G_bind for Cl^? @(Ala4...Ala4) was ??0.57 kcal/mol which shows that Cl^? ion can be reversibly stored inside the nanocapsule. The NBO analysis was also performed to investigate the charge transfer between two cyclic peptides in the complexes and also between the anion and the nanocapsule. The NBO analysis showed that the strongest hydrogen bonds between two cyclic peptides are in the complex.     

Nitrate ion as catalyst for selective silylations of nucleosides

Nitrate ion has been found to have a remarkable effect on the selectivity of silylation of ribonucleosides using the $\text{t}$-butyldimethylsilyl group.     

A selective membrane electrode for iodide ion based on a thiopyrilium ion derivative as a new ionophore

A highly selective electrode for iodide ion based on a thiopyrilium derivative as an excellent ionophore is described. At pH 5.5-8.0, the electrode responds to iodide ion in a linear range from 1.0×10⁻¹ to 8.0×10⁻⁷ M with a slope of 60.2 mV per decade, and a detection limit of 2.0×10⁻⁷ M. Selectivity coefficients determined with the match potential method (MPM) indicate that the interference from inorganic and organic anions is very small. The proposed sensor shows a fast response time of approximately 15 s. It was applied as an indicator electrode in titration of iodide with Ag⁺.     

Potentiometric determination of cetylpyridinium chloride using a new type of screen-printed ion selective electrodes

A new type of screen-printed ion-selective electrode for the determination of cetylpyridinium chloride (CPC) is presented. These new electrodes involve in situ, modified and unmodified screen-printed ion-selective electrodes for the determination of CPC. The screen-printed electrodes (SPEs) show a stable, near-Nernstian response for 1 × 10⁻² to 1 × 10⁻⁶ M CPC at 25 °C over the pH range 2-8 with cationic slope 60.66 ± 1.10. The lower detection limit is found to be 8 × 10⁻⁷ M and response time of about 3 s and exhibit adequate shelf-life (6 months). The fabricated electrodes can be also successfully used in the potentiometric titration of CPC with sodium tetraphenylborate (NaTPB). The analytical performances of the SPEs are compared with those for carbon paste electrode (CPE) and polyvinyl chloride (PVC) electrodes. The method is applied for pharmaceutical preparations with a percentage recovery of 99.60% and R.S.D. = 0.53. The frequently used CPC of analytical and technical grade as well as different water samples has been successfully titrated and the results obtained agreed with those obtained with commercial electrode and standard two-phase titration method. The sensitivity of the proposed method is comparable with the official method and ability of field measurements.     

Corner ion,edge-center ion,and face-center ion Madelung expressions for sodium chloride

Building on work of Tyagi (Progr Theor Phys 114(3):517–521, 2005), we present expressions for calculating the corner ion, edge-center ion, and face-center ion Madelung constants for bulk sodium chloride crystals.     

Synthesis of a sugar-aza-crown ether-based cavitand as a selective fluorescent chemosensor for Cu ion

A chemosensor based upon the sugar-aza-crown ether 7 with one anthracenetriazolymethyl moiety was prepared and its fluoroionophoric properties toward transition metal ions were investigated. Chemosensor 7 exhibits highly selective recognition toward Cu²⁺ ion among a series of tested metal ions in MeOH solution. The association constant for 7∗Cu²⁺ in MeOH solution was calculated to be 2.5 × 10⁴ M⁻¹.     

3.3]Ferrocenophanes with guanidine bridging units as multisignalling receptor molecules for selective recognition of anions, cations, and amino acids

The synthesis, electrochemical, and optical properties of a new [3.3]ferrocenophane framework in which two ferrocene subunits, with similar electronic environments, are linked through two substituted guanidine moieties, are reported. The receptors 4-7 have been prepared in good yields by the reaction of bis(carbodiimide) 3 with primary amines. This architecture is exceptionally "tunable" because a variety of "legs" may be appended to the basic [3.3]ferrocenophane scaffold to give a wide range of signaling units. These receptors show remarkable ion-sensing properties, due to the presence of a redox active unit (ferrocene), and an amphoteric binding site (guanidine). In this nitrogen-rich structural motif the guanidine bridges act as multipoint binding sites for anions, cations, and amino acids. Sensing of anions takes place both by unprecedented redox-ratiometric measurements (F-, Cl-, AcO-, NO3-, HSO4-, H2PO4-, and HP2O7(3-)), and colorimetric change (F-, AcO-, H2PO4-, and HP2O7(3-)). Sensing and discrimination of amino acids takes place by redox-ratiometric measurements, whereas the recognition of metal cations (Zn2+, Ni2+, and Cd2+) is achieved either by electrochemical or fluorescence measurements. Moreover, the reported receptors display splitting of the oxidation wave of the Fe(II)/Fe(III) redox couple, and form the mixed-valence species 4+* -7+* by electrochemical partial oxidation which, interestingly, show intervalence charge-transfer transitions associated to the appearance of absorption bands in the near infrared spectral region.     

Infrared ion spectroscopy inside a mass‐selective cryogenic 2D linear ion trap

We demonstrate operation of the first cryogenic 2D linear ion trap (LIT) with mass‐selective capabilities. This trap presents a number of advantages for infrared ion “action” spectroscopy studies, particularly those employing the “tagging/messenger” spectroscopy approach. The high trapping efficiencies, trapping capacities, and low detection limits make 2D LITs a highly suitable choice for low‐concentration analytes from scarce biological samples. In our trap, ions can be cooled down to cryogenic temperatures to achieve higher‐resolution infrared spectra, and individual ions can be mass selected prior to irradiation for a background‐free photodissociation scheme. Conveniently, multiple tagged analyte ions can be mass isolated and efficiently irradiated in the same experiment, allowing their infrared spectra to be recorded in parallel. This multiplexed approach is critical in terms of increasing the duty cycle of infrared ion spectroscopy, which is currently a key weakness of the technique. The compact design of this instrument, coupled with powerful mass selection capabilities, set the stage for making cryogenic infrared ion spectroscopy viable as a bioanalytical tool in small molecule identification.     

Synthesis of a bile acid-based click-macrocycle and its application in selective recognition of chloride ion

A novel method for the synthesis of a bile acid-based macrocycle has been developed using click chemistry. The 1,2,3-triazolium derivative of the macrocycle shows remarkable selectivity in binding of chloride ion.     

Synthesis,metal ion complexation and first use of a thia-aza substituted macrocyclic diamide as a novel sensing material for preparation of selective and sensitive poly(vinyl chloride)-membrane potentiometric sensors for Ag+ ion

A novel thia-aza substituted macrocyclic diamide 7,10,13-triaza-1-thia-4,16-dioxa-20,24-dimethyl-2,3;17,18-dibenzo-cyclooctadecane-6,14-dione (L) was synthesized and stability of its complexes with several alkaline earth, transition and heavy metal ions were studied conductometrically in methanol solution. The resulting 1:1 Ag⁺–L complex found to be the most stable one among all cation complexes studied. The optimized structures of the ligand and its Ag⁺ complex were also investigated. Based on the preliminary results thus obtained, L was used as an excellent sensing material to prepare polymeric membrane (PME) and coated graphite (CGE) silver-selective electrodes. The electrodes revealed a Nernstian behavior over wide Ag⁺ ion concentration ranges (i.e., 2.0 × 10^?6–1.0 × 10^?2 M for PME and 5.0 × 10^?7–1.0 × 10^?2 M for CGE). The potentiometric responses were independent of pH of the test solution in the range 2.9–6.8. The electrodes possessed advantages of low resistance, relatively fast response time, long lifetimes and, especially, good selectivity relative to a wide variety of other cations. The electrodes were used, as indicator electrodes, in the potentiometric titration of silver ion and in the determination of Ag⁺ ion in waste water, photographic emulsion, radiographic and photographic films and dental amalgams.     

Self-diffusion and trace component diffusion of chloride ion in particles of hydrous ceric oxide as a function of chloride ion capacity

Self-diffusion coefficients for chloride ion were measured as a function of chloride ion capacity in solutions of varying acdity using particles of hydrous ceric oxide heated at 50, 200 and 400°C. The measured self-diffusion coefficients are dependent only upon the total chloride ion capacity. At the same capacity, self-diffusion coefficients are almost the same for ceria particles heated at different temperatures. The trace component diffusion coefficients of chloride ion in the nitrate-form of the oxide, dried at 50°C, were also measured. Under the same conditions, the self-diffusion coefficients are somewhat higher or close to the trace component diffusion coefficient for the sample dried at 50°C.     

A novel cyclic hexapeptide as chiral selector: Application for HPLC separation of a series of dansyl amino and arylalkanoic acids

In this paper, the synthesis of a cyclic hexapeptide molecule was presented and evaluated for the enantiomer separation of a series of dansyl amino and arylalkanoic acids using high performance liquid chromatography (HPLC). It was clearly vizualized that this chiral selector allowed the separation of a great number of enantiomer pairs. The influences of the size and the hydrogen bonding donor (HBD) parameter of the organic modifier (OM) (THF (HBD = 0.00), propan-2-ol (HBD = 0.33), methanol (HBD = 0.43)) added in the mobile phase were also investigated on both the enantiomer-chiral selector association and enantioseparation.     

Diphenylphosphinoyl chloride as a chlorinating agent--the selective double activation of 1,2-diols

Treatment of 1,2-diols with diphenylphosphinoyl chloride in pyridine produces beta-chloroethyl phosphinates which react with complete control of stereochemistry to give epoxides and azido-alcohols, useful intermediates in cyclopropane synthesis.     

Amino acids as selective sulfonamide acylating agents

Acylation of antimalarial and bacteriostatic sulfonamides with N-protected amino acids and peptides was carried out using standard peptide coupling methods. These acylation reactions are regioselective for the N⁴ nitrogen atom of diazine-containing sulfonamides. In contrast, only N¹ coupling was found for sulfisoxazole, an isoxazole-based sulfonamide. Computational studies suggest that a combination of geometrical, thermodynamic and electronic factors are responsible for the different reactivities reported.